r-bioc-delayedarray →
0.8.0+dfsg-1 →
armhf → 2018-11-27 02:26:59
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-03
+==============================================================================+
| r-bioc-delayedarray 0.8.0+dfsg-1 (armhf) Tue, 27 Nov 2018 01:55:19 +0000 |
+==============================================================================+
Package: r-bioc-delayedarray
Version: 0.8.0+dfsg-1
Source Version: 0.8.0+dfsg-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-4a45661c-2f90-4411-a323-5a0f8c2d9572' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.2 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.9 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-bioc-delayedarray' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-bioc-delayedarray.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-bioc-delayedarray.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 286 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main r-bioc-delayedarray 0.8.0+dfsg-1 (dsc) [2357 B]
Get:2 http://172.17.0.1/private buster-staging/main r-bioc-delayedarray 0.8.0+dfsg-1 (tar) [279 kB]
Get:3 http://172.17.0.1/private buster-staging/main r-bioc-delayedarray 0.8.0+dfsg-1 (diff) [3900 B]
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I: NOTICE: Log filtering will replace 'build/r-bioc-delayedarray-6Qgxcj/r-bioc-delayedarray-0.8.0+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-bioc-delayedarray-6Qgxcj' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-YJCrjk/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-YJCrjk/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-YJCrjk/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-YJCrjk/apt_archive ./ InRelease
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Get:3 copy:/<<BUILDDIR>>/resolver-YJCrjk/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-YJCrjk/apt_archive ./ Sources [349 B]
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Reading package lists...
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Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales libexpat1
libgpg-error-l10n libnss-systemd libpam-systemd libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 31 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-YJCrjk/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 14039 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 11~), dh-r, r-base-dev, libgdal-dev, r-cran-matrixstats, r-bioc-biocgenerics (>= 0.25.1), r-bioc-s4vectors (>= 0.17.43), r-bioc-iranges (>= 2.11.17), r-bioc-biocparallel
Filtered Build-Depends: debhelper (>= 11~), dh-r, r-base-dev, libgdal-dev, r-cran-matrixstats, r-bioc-biocgenerics (>= 0.25.1), r-bioc-s4vectors (>= 0.17.43), r-bioc-iranges (>= 2.11.17), r-bioc-biocparallel
dpkg-deb: building package 'sbuild-build-depends-r-bioc-delayedarray-dummy' in '/<<BUILDDIR>>/resolver-YJCrjk/apt_archive/sbuild-build-depends-r-bioc-delayedarray-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-bioc-delayedarray-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-YJCrjk/apt_archive ./ InRelease
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Get:3 copy:/<<BUILDDIR>>/resolver-YJCrjk/apt_archive ./ Release.gpg [370 B]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install r-bioc-delayedarray build dependencies (apt-based resolver)
-------------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
dbus dbus-user-session e2fsprogs-l10n krb5-locales libgpg-error-l10n
libnss-systemd libpam-systemd systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper
default-libmysqlclient-dev dh-autoreconf dh-r dh-strip-nondeterminism dwz
file fontconfig fontconfig-config fonts-dejavu-core gcc-7-base gdal-data
gettext gettext-base gfortran gfortran-8 gir1.2-glib-2.0 gir1.2-harfbuzz-0.0
groff-base hdf5-helpers icu-devtools intltool-debian libaec-dev libaec0
libarchive-zip-perl libarmadillo-dev libarmadillo9 libarpack2 libarpack2-dev
libblas-dev libblas3 libboost-dev libboost1.67-dev libbsd0 libbz2-dev
libcairo2 libcharls-dev libcharls1 libcroco3 libcurl3-gnutls libcurl4
libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5
libdatrie1 libelf1 libepsilon-dev libepsilon1 libexpat1-dev
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfreexl-dev libfreexl1 libfribidi0 libfyba-dev libfyba0
libgdal-dev libgdal20 libgeos-3.7.0 libgeos-c1v5 libgeos-dev libgeotiff-dev
libgeotiff2 libgfortran-8-dev libgfortran4 libgfortran5 libgif-dev libgif7
libgirepository-1.0-1 libglib2.0-0 libglib2.0-bin libglib2.0-data
libglib2.0-dev libglib2.0-dev-bin libgraphite2-3 libgraphite2-dev
libharfbuzz-dev libharfbuzz-gobject0 libharfbuzz-icu0 libharfbuzz0b
libhdf4-0-alt libhdf4-alt-dev libhdf5-100 libhdf5-cpp-100 libhdf5-dev
libice6 libicu-dev libicu-le-hb-dev libicu-le-hb0 libicu63 libiculx63
libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
libjson-c-dev libkml-dev libkmlbase1 libkmlconvenience1 libkmldom1
libkmlengine1 libkmlregionator1 libkmlxsd1 liblapack-dev liblapack3
liblcms2-2 libltdl-dev libltdl7 liblzma-dev libmagic-mgc libmagic1
libmariadbclient-dev libmariadbclient-dev-compat libmariadbclient18
libminizip-dev libminizip1 libmpdec2 libncurses-dev libncurses5-dev
libnetcdf-dev libnetcdf13 libnghttp2-14 libnspr4 libnss3 libodbc1 libogdi3.2
libogdi3.2-dev libopenjp2-7 libopenjp2-7-dev libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3
libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev
libpoppler-dev libpoppler-private-dev libpoppler80 libpopt0 libpq-dev libpq5
libproj-dev libproj13 libpsl5 libpython3-stdlib libpython3.6-minimal
libpython3.6-stdlib libqhull-dev libqhull-r7 libqhull7 libreadline-dev
librtmp1 libsigsegv2 libsm6 libspatialite-dev libspatialite7 libsqlite3-dev
libssh2-1 libsuperlu-dev libsuperlu5 libswitch-perl libsz2 libtcl8.6
libthai-data libthai0 libtiff-dev libtiff5 libtiffxx5 libtk8.6 libtool
liburiparser-dev liburiparser1 libwebp-dev libwebp6 libwebpdemux2
libwebpmux3 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1
libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext6 libxft2 libxml2
libxml2-dev libxmuu1 libxrender1 libxss1 libxt6 libzstd-dev m4 man-db
mime-support mysql-common odbcinst odbcinst1debian2 pkg-config po-debconf
proj-data python3 python3-distutils python3-lib2to3 python3-minimal
python3.6 python3.6-minimal r-base-core r-base-dev r-bioc-biocgenerics
r-bioc-biocparallel r-bioc-iranges r-bioc-s4vectors r-cran-formatr
r-cran-futile.logger r-cran-futile.options r-cran-lambda.r
r-cran-matrixstats r-cran-snow ucf unixodbc-dev unzip uuid-dev x11-common
xauth xdg-utils zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation debtags dh-make gettext-doc libasprintf-dev libgettextpo-dev
gfortran-doc gfortran-8-doc libgfortran5-dbg libcoarrays-dev groff
libitpp-dev liblapack-doc libboost-doc libboost1.67-doc
libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev
libboost-context1.67-dev libboost-coroutine1.67-dev
libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev
libboost-filesystem1.67-dev libboost-graph1.67-dev
libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev
libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev
libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev
libboost-program-options1.67-dev libboost-python1.67-dev
libboost-random1.67-dev libboost-regex1.67-dev
libboost-serialization1.67-dev libboost-signals1.67-dev
libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev
libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev
libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev
libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev
librtmp-dev libssh2-1-dev libgdal-doc libgeotiff-epsg geotiff-bin gdal-bin
libglib2.0-doc libgdk-pixbuf2.0-bin | libgdk-pixbuf2.0-dev libxml2-utils
libgraphite2-utils libhdf4-doc hdf4-tools libhdf5-doc icu-doc liblcms2-utils
libtool-doc liblzma-doc ncurses-doc netcdf-bin netcdf-doc libmyodbc
odbc-postgresql tdsodbc unixodbc-bin ogdi-bin libfreetype6-dev
postgresql-doc-11 proj-bin readline-doc sqlite3-doc libsuperlu-doc tcl8.6
tk8.6 gcj-jdk libxerces-c-doc m4-doc apparmor less www-browser
libmail-box-perl python3-doc python3-tk python3-venv python3.6-venv
python3.6-doc binfmt-support ess r-doc-info | r-doc-pdf r-mathlib
r-base-html texlive-base texlive-latex-base texlive-generic-recommended
texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
texlive-latex-recommended texlive-latex-extra texinfo r-bioc-biobase
r-bioc-genomicranges r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy
r-bioc-deseq2 r-bioc-annotate r-cran-foreach r-cran-bbmisc
r-bioc-variantannotation r-bioc-genomicalignments r-bioc-shortread
r-cran-codetools r-cran-knitr r-cran-data.table r-bioc-genomicfeatures
r-bioc-summarizedexperiment r-cran-matrix r-bioc-delayedarray r-bioc-graph
r-cran-shiny r-cran-rmarkdown r-cran-jsonlite r-cran-base64enc
r-cran-ggplot2 r-cran-rmpi r-cran-rsprng r-cran-rlecuyer
Recommended packages:
devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl proj-bin
shared-mime-info xdg-user-dirs libpng-tools poppler-data publicsuffix
libmail-sendmail-perl r-recommended r-doc-html r-cran-runit r-cran-batchjobs
r-cran-doparallel r-bioc-rsamtools r-cran-batchtools r-cran-rmpi
r-bioc-xvector r-bioc-genomicranges r-cran-testit r-cran-codetools
r-cran-survival r-cran-testthat libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper
default-libmysqlclient-dev dh-autoreconf dh-r dh-strip-nondeterminism dwz
file fontconfig fontconfig-config fonts-dejavu-core gcc-7-base gdal-data
gettext gettext-base gfortran gfortran-8 gir1.2-glib-2.0 gir1.2-harfbuzz-0.0
groff-base hdf5-helpers icu-devtools intltool-debian libaec-dev libaec0
libarchive-zip-perl libarmadillo-dev libarmadillo9 libarpack2 libarpack2-dev
libblas-dev libblas3 libboost-dev libboost1.67-dev libbsd0 libbz2-dev
libcairo2 libcharls-dev libcharls1 libcroco3 libcurl3-gnutls libcurl4
libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5
libdatrie1 libelf1 libepsilon-dev libepsilon1 libexpat1-dev
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfreexl-dev libfreexl1 libfribidi0 libfyba-dev libfyba0
libgdal-dev libgdal20 libgeos-3.7.0 libgeos-c1v5 libgeos-dev libgeotiff-dev
libgeotiff2 libgfortran-8-dev libgfortran4 libgfortran5 libgif-dev libgif7
libgirepository-1.0-1 libglib2.0-0 libglib2.0-bin libglib2.0-data
libglib2.0-dev libglib2.0-dev-bin libgraphite2-3 libgraphite2-dev
libharfbuzz-dev libharfbuzz-gobject0 libharfbuzz-icu0 libharfbuzz0b
libhdf4-0-alt libhdf4-alt-dev libhdf5-100 libhdf5-cpp-100 libhdf5-dev
libice6 libicu-dev libicu-le-hb-dev libicu-le-hb0 libicu63 libiculx63
libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
libjson-c-dev libkml-dev libkmlbase1 libkmlconvenience1 libkmldom1
libkmlengine1 libkmlregionator1 libkmlxsd1 liblapack-dev liblapack3
liblcms2-2 libltdl-dev libltdl7 liblzma-dev libmagic-mgc libmagic1
libmariadbclient-dev libmariadbclient-dev-compat libmariadbclient18
libminizip-dev libminizip1 libmpdec2 libncurses-dev libncurses5-dev
libnetcdf-dev libnetcdf13 libnghttp2-14 libnspr4 libnss3 libodbc1 libogdi3.2
libogdi3.2-dev libopenjp2-7 libopenjp2-7-dev libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3
libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev
libpoppler-dev libpoppler-private-dev libpoppler80 libpopt0 libpq-dev libpq5
libproj-dev libproj13 libpsl5 libpython3-stdlib libpython3.6-minimal
libpython3.6-stdlib libqhull-dev libqhull-r7 libqhull7 libreadline-dev
librtmp1 libsigsegv2 libsm6 libspatialite-dev libspatialite7 libsqlite3-dev
libssh2-1 libsuperlu-dev libsuperlu5 libswitch-perl libsz2 libtcl8.6
libthai-data libthai0 libtiff-dev libtiff5 libtiffxx5 libtk8.6 libtool
liburiparser-dev liburiparser1 libwebp-dev libwebp6 libwebpdemux2
libwebpmux3 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1
libxdmcp6 libxerces-c-dev libxerces-c3.2 libxext6 libxft2 libxml2
libxml2-dev libxmuu1 libxrender1 libxss1 libxt6 libzstd-dev m4 man-db
mime-support mysql-common odbcinst odbcinst1debian2 pkg-config po-debconf
proj-data python3 python3-distutils python3-lib2to3 python3-minimal
python3.6 python3.6-minimal r-base-core r-base-dev r-bioc-biocgenerics
r-bioc-biocparallel r-bioc-iranges r-bioc-s4vectors r-cran-formatr
r-cran-futile.logger r-cran-futile.options r-cran-lambda.r
r-cran-matrixstats r-cran-snow
sbuild-build-depends-r-bioc-delayedarray-dummy ucf unixodbc-dev unzip
uuid-dev x11-common xauth xdg-utils zip zlib1g-dev
0 upgraded, 248 newly installed, 0 to remove and 31 not upgraded.
Need to get 139 MB/145 MB of archives.
After this operation, 587 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-YJCrjk/apt_archive ./ sbuild-build-depends-r-bioc-delayedarray-dummy 0.invalid.0 [948 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-2 [25.1 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.4-3 [1160 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libpython3.6-minimal armhf 3.6.7-1 [567 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf python3.6-minimal armhf 3.6.7-1 [1380 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.6.7-1 [36.4 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.61 [37.1 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libpython3.6-stdlib armhf 3.6.7-1 [1639 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf python3.6 armhf 3.6.7-1 [240 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.6.7-1 [19.9 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.6.7-1 [61.4 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.34-2 [239 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.34-2 [107 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.34-2 [65.0 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-6 [547 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.45.0-1 [20.5 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.45.0-1 [12.4 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.170-0.5 [160 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-2 [67.4 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.1-2 [1051 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-4 [7974 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.5.3 [1002 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libmariadbclient18 armhf 1:10.1.37-1 [683 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libmariadbclient-dev armhf 1:10.1.37-1 [1533 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libmariadbclient-dev-compat armhf 1:10.1.37-1 [28.2 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf default-libmysqlclient-dev armhf 1.0.4 [3708 B]
Get:47 http://172.17.0.1/private buster-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf unzip armhf 6.0-21 [149 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.24+nmu5 [20.8 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.24+nmu5 [17.2 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libgfortran5 armhf 8.2.0-9+rpi1 [205 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-1+b1 [104 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13.1-1 [132 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13.1-1 [108 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13.1-1 [99.2 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.16.0-1 [600 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.34.0-1 [73.4 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [54.0 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-2 [125 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libcurl4 armhf 7.61.0-1 [282 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-1+b1 [1493 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libfribidi0 armhf 1.0.5-3 [61.9 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.28-1 [170 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.12-1 [35.8 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.28-1 [50.9 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.42.4-4 [166 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.12-1 [69.1 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 2.1.1-1+rpi1 [1013 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-4 [61.9 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-4 [51.5 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libtcl8.6 armhf 8.6.8+dfsg-4 [863 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.10-2 [236 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libtk8.6 armhf 8.6.8-4 [657 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf r-base-core armhf 3.5.1-2 [23.6 MB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libgfortran-8-dev armhf 8.2.0-9+rpi1 [248 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf gfortran-8 armhf 8.2.0-9+rpi1 [5812 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf gfortran armhf 4:8.2.0-2+rpi1 [1432 B]
Get:87 http://172.17.0.1/private buster-staging/main armhf libblas-dev armhf 3.8.0-1+b1 [113 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf liblapack-dev armhf 3.8.0-1+b1 [1550 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libncurses-dev armhf 6.1+20181013-1 [278 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libncurses5-dev armhf 6.1+20181013-1 [940 B]
Get:91 http://172.17.0.1/private buster-staging/main armhf libreadline-dev armhf 7.0-5 [110 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf libpcre16-3 armhf 2:8.39-11+rpi1 [234 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libpcre32-3 armhf 2:8.39-11+rpi1 [227 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libpcrecpp0v5 armhf 2:8.39-11+rpi1 [150 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libpcre3-dev armhf 2:8.39-11+rpi1 [565 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libpng-dev armhf 1.6.34-2+rpi1 [275 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libbz2-dev armhf 1.0.6-9 [27.7 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libicu-le-hb0 armhf 1.0.3+git180724-3 [12.9 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libiculx63 armhf 63.1-4 [26.3 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 63.1-4 [166 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-icu0 armhf 2.1.1-1+rpi1 [742 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-gobject0 armhf 2.1.1-1+rpi1 [749 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libgirepository-1.0-1 armhf 1.58.0-1 [78.2 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf gir1.2-glib-2.0 armhf 1.58.0-1 [143 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf gir1.2-harfbuzz-0.0 armhf 2.1.1-1+rpi1 [757 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libglib2.0-data all 2.58.1-2 [1105 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libglib2.0-bin armhf 2.58.1-2 [114 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.7.1-1 [78.7 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.7.1-1 [144 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf libglib2.0-dev-bin armhf 2.58.1-2 [151 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf libglib2.0-dev armhf 2.58.1-2 [1237 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf libgraphite2-dev armhf 1.3.12-1 [22.6 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-dev armhf 2.1.1-1+rpi1 [1099 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libicu-le-hb-dev armhf 1.0.3+git180724-3 [28.5 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 63.1-4 [8865 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libxmuu1 armhf 2:1.1.2-2 [23.0 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf r-base-dev all 3.5.1-2 [4484 B]
Get:119 http://172.17.0.1/private buster-staging/main armhf libfile-which-perl all 1.22-1 [14.6 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf dh-r all 20181101 [34.0 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf gdal-data all 2.3.2+dfsg-2 [733 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf hdf5-helpers armhf 1.10.0-patch1+docs-4+b2 [36.4 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf libaec-dev armhf 1.0.2-1 [19.1 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf libarpack2 armhf 3.6.3-1+rpi1 [81.2 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf libarmadillo9 armhf 1:9.100.6+dfsg-1 [86.3 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf libarpack2-dev armhf 3.6.3-1+rpi1 [89.3 kB]
Get:127 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.3.0-19 [191 kB]
Get:128 http://172.17.0.1/private buster-staging/main armhf libhdf5-100 armhf 1.10.0-patch1+docs-4+b2 [1216 kB]
Get:129 http://172.17.0.1/private buster-staging/main armhf libhdf5-cpp-100 armhf 1.10.0-patch1+docs-4+b2 [117 kB]
Get:130 http://172.17.0.1/private buster-staging/main armhf libhdf5-dev armhf 1.10.0-patch1+docs-4+b2 [2150 kB]
Get:131 http://172.17.0.1/private buster-staging/main armhf libsuperlu-dev armhf 5.2.1+dfsg1-3 [18.2 kB]
Get:132 http://172.17.0.1/private buster-staging/main armhf libarmadillo-dev armhf 1:9.100.6+dfsg-1 [357 kB]
Get:133 http://172.17.0.1/private buster-staging/main armhf libboost1.67-dev armhf 1.67.0-10 [8387 kB]
Get:134 http://172.17.0.1/private buster-staging/main armhf libboost-dev armhf 1.67.0.1 [3860 B]
Get:135 http://172.17.0.1/private buster-staging/main armhf libcharls1 armhf 1.1.0+dfsg-3 [44.4 kB]
Get:136 http://172.17.0.1/private buster-staging/main armhf libcharls-dev armhf 1.1.0+dfsg-3 [21.8 kB]
Get:137 http://172.17.0.1/private buster-staging/main armhf libcurl3-gnutls armhf 7.61.0-1 [281 kB]
Get:138 http://172.17.0.1/private buster-staging/main armhf libcurl4-gnutls-dev armhf 7.61.0-1 [353 kB]
Get:139 http://172.17.0.1/private buster-staging/main armhf libdap25 armhf 3.20.0-1 [468 kB]
Get:140 http://172.17.0.1/private buster-staging/main armhf libdapserver7v5 armhf 3.20.0-1 [126 kB]
Get:141 http://172.17.0.1/private buster-staging/main armhf libdapclient6v5 armhf 3.20.0-1 [183 kB]
Get:142 http://172.17.0.1/private buster-staging/main armhf libxml2-dev armhf 2.9.4+dfsg1-7+b1 [640 kB]
Get:143 http://172.17.0.1/private buster-staging/main armhf uuid-dev armhf 2.32.1-0.1 [91.9 kB]
Get:144 http://172.17.0.1/private buster-staging/main armhf libdap-dev armhf 3.20.0-1 [768 kB]
Get:145 http://172.17.0.1/private buster-staging/main armhf libpopt0 armhf 1.16-11 [45.9 kB]
Get:146 http://172.17.0.1/private buster-staging/main armhf libepsilon1 armhf 0.9.2+dfsg-4 [36.4 kB]
Get:147 http://172.17.0.1/private buster-staging/main armhf libepsilon-dev armhf 0.9.2+dfsg-4 [46.0 kB]
Get:148 http://172.17.0.1/private buster-staging/main armhf libexpat1-dev armhf 2.2.6-1 [127 kB]
Get:149 http://172.17.0.1/private buster-staging/main armhf libfreexl1 armhf 1.0.5-3 [31.8 kB]
Get:150 http://172.17.0.1/private buster-staging/main armhf libfreexl-dev armhf 1.0.5-3 [30.3 kB]
Get:151 http://172.17.0.1/private buster-staging/main armhf libfyba0 armhf 4.1.1-6 [97.8 kB]
Get:152 http://172.17.0.1/private buster-staging/main armhf libfyba-dev armhf 4.1.1-6 [161 kB]
Get:153 http://172.17.0.1/private buster-staging/main armhf libgeos-3.7.0 armhf 3.7.0-1 [630 kB]
Get:154 http://172.17.0.1/private buster-staging/main armhf libgeos-c1v5 armhf 3.7.0-1 [284 kB]
Get:155 http://172.17.0.1/private buster-staging/main armhf proj-data all 5.2.0-1 [6986 kB]
Get:156 http://172.17.0.1/private buster-staging/main armhf libproj13 armhf 5.2.0-1 [185 kB]
Get:157 http://172.17.0.1/private buster-staging/main armhf libgeotiff2 armhf 1.4.2-4 [66.2 kB]
Get:158 http://172.17.0.1/private buster-staging/main armhf libgif7 armhf 5.1.4-3 [41.0 kB]
Get:159 http://172.17.0.1/private buster-staging/main armhf libhdf4-0-alt armhf 4.2.13-4 [234 kB]
Get:160 http://172.17.0.1/private buster-staging/main armhf liburiparser1 armhf 0.9.0-1 [38.6 kB]
Get:161 http://172.17.0.1/private buster-staging/main armhf libkmlbase1 armhf 1.3.0-7 [42.1 kB]
Get:162 http://172.17.0.1/private buster-staging/main armhf libkmldom1 armhf 1.3.0-7 [144 kB]
Get:163 http://172.17.0.1/private buster-staging/main armhf libkmlengine1 armhf 1.3.0-7 [67.4 kB]
Get:164 http://172.17.0.1/private buster-staging/main armhf libkmlconvenience1 armhf 1.3.0-7 [44.4 kB]
Get:165 http://172.17.0.1/private buster-staging/main armhf libkmlregionator1 armhf 1.3.0-7 [22.2 kB]
Get:166 http://172.17.0.1/private buster-staging/main armhf libkmlxsd1 armhf 1.3.0-7 [28.7 kB]
Get:167 http://172.17.0.1/private buster-staging/main armhf libnetcdf13 armhf 1:4.6.1-3 [344 kB]
Get:168 http://172.17.0.1/private buster-staging/main armhf libltdl7 armhf 2.4.6-6 [387 kB]
Get:169 http://172.17.0.1/private buster-staging/main armhf libodbc1 armhf 2.3.6-0.1 [186 kB]
Get:170 http://172.17.0.1/private buster-staging/main armhf libogdi3.2 armhf 3.2.1+ds-4 [194 kB]
Get:171 http://172.17.0.1/private buster-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:172 http://172.17.0.1/private buster-staging/main armhf libnspr4 armhf 2:4.20-1 [89.6 kB]
Get:173 http://172.17.0.1/private buster-staging/main armhf libnss3 armhf 2:3.39-1 [937 kB]
Get:174 http://172.17.0.1/private buster-staging/main armhf libpoppler80 armhf 0.69.0-2 [1322 kB]
Get:175 http://172.17.0.1/private buster-staging/main armhf libpq5 armhf 11.1-1+b1 [146 kB]
Get:176 http://172.17.0.1/private buster-staging/main armhf libxerces-c3.2 armhf 3.2.2+debian-1+b1 [707 kB]
Get:177 http://172.17.0.1/private buster-staging/main armhf odbcinst armhf 2.3.6-0.1 [47.6 kB]
Get:178 http://172.17.0.1/private buster-staging/main armhf odbcinst1debian2 armhf 2.3.6-0.1 [70.8 kB]
Get:179 http://172.17.0.1/private buster-staging/main armhf libgdal20 armhf 2.3.2+dfsg-2+b2 [4847 kB]
Get:180 http://172.17.0.1/private buster-staging/main armhf libgeos-dev armhf 3.7.0-1 [306 kB]
Get:181 http://172.17.0.1/private buster-staging/main armhf libtiffxx5 armhf 4.0.10-2 [107 kB]
Get:182 http://172.17.0.1/private buster-staging/main armhf libtiff-dev armhf 4.0.10-2 [347 kB]
Get:183 http://172.17.0.1/private buster-staging/main armhf libgeotiff-dev armhf 1.4.2-4 [93.4 kB]
Get:184 http://172.17.0.1/private buster-staging/main armhf libgif-dev armhf 5.1.4-3 [43.4 kB]
Get:185 http://172.17.0.1/private buster-staging/main armhf libnetcdf-dev armhf 1:4.6.1-3 [80.6 kB]
Get:186 http://172.17.0.1/private buster-staging/main armhf libhdf4-alt-dev armhf 4.2.13-4 [310 kB]
Get:187 http://172.17.0.1/private buster-staging/main armhf libjson-c-dev armhf 0.12.1-1.3 [34.6 kB]
Get:188 http://172.17.0.1/private buster-staging/main armhf libminizip-dev armhf 1.1-8 [25.6 kB]
Get:189 http://172.17.0.1/private buster-staging/main armhf liburiparser-dev armhf 0.9.0-1 [20.9 kB]
Get:190 http://172.17.0.1/private buster-staging/main armhf libkml-dev armhf 1.3.0-7 [939 kB]
Get:191 http://172.17.0.1/private buster-staging/main armhf libltdl-dev armhf 2.4.6-6 [159 kB]
Get:192 http://172.17.0.1/private buster-staging/main armhf libproj-dev armhf 5.2.0-1 [228 kB]
Get:193 http://172.17.0.1/private buster-staging/main armhf libogdi3.2-dev armhf 3.2.1+ds-4 [38.2 kB]
Get:194 http://172.17.0.1/private buster-staging/main armhf libopenjp2-7-dev armhf 2.3.0-1 [43.7 kB]
Get:195 http://172.17.0.1/private buster-staging/main armhf libpoppler-dev armhf 0.69.0-2 [23.0 kB]
Get:196 http://172.17.0.1/private buster-staging/main armhf libpoppler-private-dev armhf 0.69.0-2 [190 kB]
Get:197 http://172.17.0.1/private buster-staging/main armhf libpq-dev armhf 11.1-1+b1 [146 kB]
Get:198 http://172.17.0.1/private buster-staging/main armhf libqhull-r7 armhf 2015.2-4 [171 kB]
Get:199 http://172.17.0.1/private buster-staging/main armhf libqhull-dev armhf 2015.2-4 [346 kB]
Get:200 http://172.17.0.1/private buster-staging/main armhf libsqlite3-dev armhf 3.25.3-1 [677 kB]
Get:201 http://172.17.0.1/private buster-staging/main armhf libspatialite-dev armhf 4.3.0a-5+b2 [1460 kB]
Get:202 http://172.17.0.1/private buster-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:203 http://172.17.0.1/private buster-staging/main armhf libwebp-dev armhf 0.6.1-2 [304 kB]
Get:204 http://172.17.0.1/private buster-staging/main armhf libxerces-c-dev armhf 3.2.2+debian-1+b1 [1466 kB]
Get:205 http://172.17.0.1/private buster-staging/main armhf libzstd-dev armhf 1.3.5+dfsg-1+rpi1 [226 kB]
Get:206 http://172.17.0.1/private buster-staging/main armhf unixodbc-dev armhf 2.3.6-0.1 [232 kB]
Get:207 http://172.17.0.1/private buster-staging/main armhf libgdal-dev armhf 2.3.2+dfsg-2+b2 [6274 kB]
Get:208 http://172.17.0.1/private buster-staging/main armhf r-bioc-biocgenerics all 0.28.0-2 [644 kB]
Get:209 http://172.17.0.1/private buster-staging/main armhf r-cran-formatr all 1.5-3 [149 kB]
Get:210 http://172.17.0.1/private buster-staging/main armhf r-cran-lambda.r all 1.2.3-2 [117 kB]
Get:211 http://172.17.0.1/private buster-staging/main armhf r-cran-futile.options all 1.0.1-2 [19.8 kB]
Get:212 http://172.17.0.1/private buster-staging/main armhf r-cran-futile.logger all 1.4.3-3 [102 kB]
Get:213 http://172.17.0.1/private buster-staging/main armhf r-cran-snow all 1:0.4.3-1 [108 kB]
Get:214 http://172.17.0.1/private buster-staging/main armhf r-bioc-biocparallel armhf 1.16.0-1 [1056 kB]
Get:215 http://172.17.0.1/private buster-staging/main armhf r-bioc-s4vectors armhf 0.20.1-2 [1807 kB]
Get:216 http://172.17.0.1/private buster-staging/main armhf r-bioc-iranges armhf 2.16.0-1 [2121 kB]
Get:217 http://172.17.0.1/private buster-staging/main armhf r-cran-matrixstats armhf 0.54.0-1 [551 kB]
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Setting up debhelper (11.5.3) ...
Setting up dh-r (20181101) ...
Setting up libxerces-c-dev (3.2.2+debian-1+b1) ...
Setting up unixodbc-dev:armhf (2.3.6-0.1) ...
Setting up libdap-dev:armhf (3.20.0-1) ...
Setting up libgdal20 (2.3.2+dfsg-2+b2) ...
Setting up dh-strip-nondeterminism (0.45.0-1) ...
Setting up libgdal-dev (2.3.2+dfsg-2+b2) ...
Setting up sbuild-build-depends-r-bioc-delayedarray-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-8+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-7+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-9+rpi1 gcc-8_8.2.0-9+rpi1 libc6-dev_2.27-8+rpi1 libstdc++-8-dev_8.2.0-9+rpi1 libstdc++6_8.2.0-9+rpi1 linux-libc-dev_4.18.10-2+rpi1+b1
Package versions: adduser_3.118 apt_1.8.0~alpha2 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-7+rpi1 binutils-arm-linux-gnueabihf_2.31.1-7+rpi1 binutils-common_2.31.1-7+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.32.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20170717 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-9+rpi1 dash_0.5.10.2-1 dbus_1.12.10-1 dbus-user-session_1.12.10-1 dctrl-tools_2.24-3 debconf_1.5.69 debhelper_11.5.3 debianutils_4.8.6 default-libmysqlclient-dev_1.0.4 dh-autoreconf_19 dh-r_20181101 dh-strip-nondeterminism_0.45.0-1 diffutils_1:3.6-1 dirmngr_2.2.10-3+rpi1 dmsetup_2:1.02.145-4.1+b5 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-2 e2fslibs_1.44.4-2 e2fsprogs_1.44.4-2 e2fsprogs-l10n_1.44.4-2 fakeroot_1.23-1 fdisk_2.32.1-0.1 file_1:5.34-2 findutils_4.6.0+git+20181018-1 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 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libpopt0_1.16-11 libpq-dev_11.1-1+b1 libpq5_11.1-1+b1 libprocps7_2:3.3.15-2 libproj-dev_5.2.0-1 libproj13_5.2.0-1 libpsl5_0.20.2-2 libpython3-stdlib_3.6.7-1 libpython3.6-minimal_3.6.7-1 libpython3.6-stdlib_3.6.7-1 libqhull-dev_2015.2-4 libqhull-r7_2015.2-4 libqhull7_2015.2-4 libreadline-dev_7.0-5 libreadline7_7.0-5 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27~rc8-1 libsasl2-modules-db_2.1.27~rc8-1 libseccomp2_2.3.3-3 libselinux1_2.8-1 libsemanage-common_2.8-1 libsemanage1_2.8-1 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm6_2:1.2.2-1+b3 libsmartcols1_2.32.1-0.1 libspatialite-dev_4.3.0a-5+b2 libspatialite7_4.3.0a-5+b2 libsqlite3-0_3.25.3-1 libsqlite3-dev_3.25.3-1 libss2_1.44.4-2 libssh2-1_1.8.0-2 libssl1.1_1.1.1-2 libstdc++-8-dev_8.2.0-9+rpi1 libstdc++6_8.2.0-9+rpi1 libsuperlu-dev_5.2.1+dfsg1-3 libsuperlu5_5.2.1+dfsg1-3 libswitch-perl_2.17-2 libsystemd0_239-11+rpi1 libsz2_1.0.2-1 libtasn1-6_4.13-3 libtcl8.6_8.6.8+dfsg-4 libthai-data_0.1.28-1 libthai0_0.1.28-1 libtiff-dev_4.0.10-2 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mysql-common_5.8+1.0.4 nano_3.1-1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 netbase_5.4 odbcinst_2.3.6-0.1 odbcinst1debian2_2.3.6-0.1 openssl_1.1.1-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.0-3 perl-base_5.28.0-3 perl-modules-5.28_5.28.0-3 pinentry-curses_1.1.0-1 pkg-config_0.29-4 plymouth_0.9.4-1 po-debconf_1.0.21 procps_2:3.3.15-2 proj-data_5.2.0-1 python3_3.6.7-1 python3-distutils_3.7.1-1 python3-lib2to3_3.7.1-1 python3-minimal_3.6.7-1 python3.6_3.6.7-1 python3.6-minimal_3.6.7-1 r-base-core_3.5.1-2 r-base-dev_3.5.1-2 r-bioc-biocgenerics_0.28.0-2 r-bioc-biocparallel_1.16.0-1 r-bioc-iranges_2.16.0-1 r-bioc-s4vectors_0.20.1-2 r-cran-formatr_1.5-3 r-cran-futile.logger_1.4.3-3 r-cran-futile.options_1.0.1-2 r-cran-lambda.r_1.2.3-2 r-cran-matrixstats_0.54.0-1 r-cran-snow_1:0.4.3-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-delayedarray-dummy_0.invalid.0 sed_4.5-2 sensible-utils_0.0.12 systemd_239-11+rpi1 systemd-sysv_239-11+rpi1 sysvinit-utils_2.88dsf-59.11 tar_1.30+dfsg-2 tzdata_2018g-1 ucf_3.0038 udev_239-11+rpi1 unixodbc-dev_2.3.6-0.1 unzip_6.0-21 util-linux_2.32.1-0.1 uuid-dev_2.32.1-0.1 x11-common_1:7.7+19 xauth_1:1.0.10-1 xdg-utils_1.1.3-1 xz-utils_5.2.2-1.3 zip_3.0-11 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Nov 8 22:16:55 2018 UTC
gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54
gpgv: issuer "daissi@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-bioc-delayedarray_0.8.0+dfsg-1.dsc
dpkg-source: info: extracting r-bioc-delayedarray in /<<BUILDDIR>>/r-bioc-delayedarray-0.8.0+dfsg
dpkg-source: info: unpacking r-bioc-delayedarray_0.8.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking r-bioc-delayedarray_0.8.0+dfsg-1.debian.tar.xz
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-4a45661c-2f90-4411-a323-5a0f8c2d9572
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-bioc-delayedarray
dpkg-buildpackage: info: source version 0.8.0+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_autoreconf_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules build-arch
dh build-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_autoreconf -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch --buildsystem R
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_installdirs -a -O--buildsystem=R
dh_auto_install -a -O--buildsystem=R
I: R packages needed for DEP8: runit, biocgenerics, genefilter
I: R Package: DelayedArray Version: 0.8.0
I: Building using R version 3.5.1-2
I: R API version: r-api-3.5
I: Using built-time from d/changelog: Thu, 08 Nov 2018 23:10:03 +0100
mkdir -p /<<BUILDDIR>>/r-bioc-delayedarray-0.8.0\+dfsg/debian/r-bioc-delayedarray/usr/lib/R/site-library
R CMD INSTALL -l /<<BUILDDIR>>/r-bioc-delayedarray-0.8.0\+dfsg/debian/r-bioc-delayedarray/usr/lib/R/site-library --clean . "--built-timestamp='Thu, 08 Nov 2018 23:10:03 +0100'"
* installing *source* package 'DelayedArray' ...
** libs
make[1]: Entering directory '/<<BUILDDIR>>/r-bioc-delayedarray-0.8.0+dfsg/src'
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/S4Vectors/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-eYsds1/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c R_init_DelayedArray.c -o R_init_DelayedArray.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/S4Vectors/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-eYsds1/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c S4Vectors_stubs.c -o S4Vectors_stubs.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/S4Vectors/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-eYsds1/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c abind.c -o abind.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o DelayedArray.so R_init_DelayedArray.o S4Vectors_stubs.o abind.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<BUILDDIR>>/r-bioc-delayedarray-0.8.0+dfsg/src'
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make[1]: Leaving directory '/<<BUILDDIR>>/r-bioc-delayedarray-0.8.0+dfsg/src'
installing to /<<BUILDDIR>>/r-bioc-delayedarray-0.8.0+dfsg/debian/r-bioc-delayedarray/usr/lib/R/site-library/DelayedArray/libs
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'aperm' in package 'DelayedArray'
in method for 'coerce' with signature '"dgCMatrix","SparseArraySeed"': no definition for class "dgCMatrix"
in method for 'coerce' with signature '"SparseArraySeed","dgCMatrix"': no definition for class "dgCMatrix"
in method for 'coerce' with signature '"SparseArraySeed","sparseMatrix"': no definition for class "sparseMatrix"
in method for 'coerce' with signature '"DelayedMatrix","dgCMatrix"': no definition for class "dgCMatrix"
in method for 'coerce' with signature '"DelayedMatrix","sparseMatrix"': no definition for class "sparseMatrix"
Creating a generic function for 'sweep' from package 'base' in package 'DelayedArray'
Creating a new generic function for 'apply' in package 'DelayedArray'
Creating a generic function for 'dnorm' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'pnorm' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'qnorm' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'dbinom' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'pbinom' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'qbinom' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'dpois' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'ppois' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'qpois' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'dlogis' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'plogis' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'qlogis' from package 'stats' in package 'DelayedArray'
Creating a new generic function for 'rowMaxs' in package 'DelayedArray'
Creating a new generic function for 'colMaxs' in package 'DelayedArray'
Creating a new generic function for 'rowMins' in package 'DelayedArray'
Creating a new generic function for 'colMins' in package 'DelayedArray'
Creating a new generic function for 'rowRanges' in package 'DelayedArray'
Creating a new generic function for 'colRanges' in package 'DelayedArray'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (DelayedArray)
W: Ignoring specified R dependency: R (>= 3.4)
I: Using r-cran-matrixstats for Depends:matrixStats
I: Using r-bioc-biocgenerics for Depends:BiocGenerics (>= 0.27.1)
I: Using r-bioc-s4vectors for Depends:S4Vectors (>= 0.19.15)
I: Using r-bioc-iranges for Depends:IRanges (>= 2.11.17)
I: Using r-bioc-biocparallel for Depends:BiocParallel
I: Using r-cran-runit for Recommends:runit
I: Using r-bioc-biocgenerics for Recommends:biocgenerics
I: Using r-bioc-genefilter for Recommends:genefilter
I: Using r-cran-matrix for Suggests:Matrix
W: Cannot find a debian package for Suggests:HDF5Array
I: Using r-bioc-summarizedexperiment for Suggests:SummarizedExperiment
W: Cannot find a debian package for Suggests:airway
W: Cannot find a debian package for Suggests:pryr
W: Cannot find a debian package for Suggests:DelayedMatrixStats
I: Using r-cran-knitr for Suggests:knitr
W: Cannot find a debian package for Suggests:BiocStyle
Create lintian-override for package-contains-documentation-outside-usr-share-doc
dh_install -a -O--buildsystem=R
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dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-bioc-delayedarray' in '../r-bioc-delayedarray_0.8.0+dfsg-1_armhf.deb'.
dpkg-deb: building package 'r-bioc-delayedarray-dbgsym' in '../r-bioc-delayedarray-dbgsym_0.8.0+dfsg-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../r-bioc-delayedarray_0.8.0+dfsg-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-11-27T02:26:52Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
r-bioc-delayedarray_0.8.0+dfsg-1_armhf.changes:
-----------------------------------------------
Format: 1.8
Date: Thu, 08 Nov 2018 23:10:03 +0100
Source: r-bioc-delayedarray
Binary: r-bioc-delayedarray
Architecture: armhf
Version: 0.8.0+dfsg-1
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Dylan Aïssi <daissi@debian.org>
Description:
r-bioc-delayedarray - BioConductor delayed operations on array-like objects
Changes:
r-bioc-delayedarray (0.8.0+dfsg-1) unstable; urgency=medium
.
* Team upload.
* New upstream version
* dh-update-R to update Build-Depends
* Switch Architecture from all to any
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+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
r-bioc-delayedarray-dbgsym_0.8.0+dfsg-1_armhf.deb
-------------------------------------------------
new Debian package, version 2.0.
size 26344 bytes: control archive=544 bytes.
421 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: r-bioc-delayedarray-dbgsym
Source: r-bioc-delayedarray
Version: 0.8.0+dfsg-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 47
Depends: r-bioc-delayedarray (= 0.8.0+dfsg-1)
Section: debug
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Description: debug symbols for r-bioc-delayedarray
Build-Ids: 7effbcd863e7d4a1b1ca371b7d2a77af8d14f9af
drwxr-xr-x root/root 0 2018-11-08 22:10 ./
drwxr-xr-x root/root 0 2018-11-08 22:10 ./usr/
drwxr-xr-x root/root 0 2018-11-08 22:10 ./usr/lib/
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lrwxrwxrwx root/root 0 2018-11-08 22:10 ./usr/share/doc/r-bioc-delayedarray-dbgsym -> r-bioc-delayedarray
r-bioc-delayedarray_0.8.0+dfsg-1_armhf.deb
------------------------------------------
new Debian package, version 2.0.
size 1280668 bytes: control archive=2132 bytes.
1133 bytes, 20 lines control
3879 bytes, 42 lines md5sums
Package: r-bioc-delayedarray
Version: 0.8.0+dfsg-1
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 1936
Depends: r-base-core (>= 3.5.1-2), r-api-3.5, r-cran-matrixstats, r-bioc-biocgenerics (>= 0.27.1), r-bioc-s4vectors (>= 0.19.15), r-bioc-iranges (>= 2.11.17), r-bioc-biocparallel, libc6 (>= 2.4)
Recommends: r-cran-runit, r-bioc-genefilter
Suggests: r-cran-matrix, r-bioc-summarizedexperiment, r-cran-knitr
Section: gnu-r
Priority: optional
Homepage: https://bioconductor.org/packages/DelayedArray/
Description: BioConductor delayed operations on array-like objects
Wrapping an array-like object (typically an on-disk object) in
a DelayedArray object allows one to perform common array operations
on it without loading the object in memory. In order to reduce memory
usage and optimize performance, operations on the object are either
delayed or executed using a block processing mechanism. Note that this
also works on in-memory array-like objects like DataFrame objects
(typically with Rle columns), Matrix objects, and ordinary arrays and
data frames.
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| Summary |
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Build Architecture: armhf
Build-Space: 4320
Build-Time: 223
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 1621
Job: r-bioc-delayedarray_0.8.0+dfsg-1
Machine Architecture: armhf
Package: r-bioc-delayedarray
Package-Time: 1893
Source-Version: 0.8.0+dfsg-1
Space: 4320
Status: successful
Version: 0.8.0+dfsg-1
--------------------------------------------------------------------------------
Finished at 2018-11-27T02:26:52Z
Build needed 00:31:33, 4320k disc space