Raspbian Package Auto-Building

Build log for r-bioc-biostrings (2.56.0-1) on armhf

r-bioc-biostrings2.56.0-1armhf → 2020-05-30 14:18:30

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard

+==============================================================================+
| r-bioc-biostrings 2.56.0-1 (armhf)           Sat, 30 May 2020 13:53:54 +0000 |
+==============================================================================+

Package: r-bioc-biostrings
Version: 2.56.0-1
Source Version: 2.56.0-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-ffed540d-23a5-442b-b33c-055c38a2717d' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.7 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
Fetched 24.5 MB in 28s (890 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'r-bioc-biostrings' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-bioc-biostrings.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-bioc-biostrings.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 12.7 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main r-bioc-biostrings 2.56.0-1 (dsc) [2258 B]
Get:2 http://172.17.0.1/private bullseye-staging/main r-bioc-biostrings 2.56.0-1 (tar) [12.7 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main r-bioc-biostrings 2.56.0-1 (diff) [4852 B]
Fetched 12.7 MB in 5s (2517 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-bioc-biostrings-JEIARg/r-bioc-biostrings-2.56.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-bioc-biostrings-JEIARg' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-UCHkAL/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-UCHkAL/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-UCHkAL/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2797 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 22 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (22.7 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12255 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-bioc-biocgenerics (>= 0.31.5), r-bioc-s4vectors (>= 0.25.14), r-bioc-iranges (>= 2.21.6), r-bioc-xvector (>= 0.27.2), r-cran-crayon
Filtered Build-Depends: debhelper-compat (= 12), dh-r, r-base-dev, r-bioc-biocgenerics (>= 0.31.5), r-bioc-s4vectors (>= 0.25.14), r-bioc-iranges (>= 2.21.6), r-bioc-xvector (>= 0.27.2), r-cran-crayon
dpkg-deb: building package 'sbuild-build-depends-r-bioc-biostrings-dummy' in '/<<BUILDDIR>>/resolver-UCHkAL/apt_archive/sbuild-build-depends-r-bioc-biostrings-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-r-bioc-biostrings-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ Sources [570 B]
Get:5 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ Packages [652 B]
Fetched 2555 B in 1s (3113 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install r-bioc-biostrings build dependencies (apt-based resolver)
-----------------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cpp-9
  dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
  fontconfig fontconfig-config fonts-dejavu-core g++-9 gcc-9 gcc-9-base
  gettext gettext-base gfortran gfortran-9 groff-base icu-devtools
  intltool-debian libarchive-zip-perl libasan5 libblas-dev libblas3 libbrotli1
  libbsd0 libbz2-dev libcairo2 libcroco3 libcurl4 libdatrie1 libdebhelper-perl
  libelf1 libexpat1 libfile-stripnondeterminism-perl libfile-which-perl
  libfontconfig1 libfreetype6 libfribidi0 libgcc-9-dev libgfortran-9-dev
  libgfortran5 libglib2.0-0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b
  libice6 libicu-dev libicu63 libjbig0 libjpeg-dev libjpeg62-turbo
  libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
  liblapack-dev liblapack3 liblzma-dev libmagic-mgc libmagic1 libncurses-dev
  libncurses5-dev libncurses6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0
  libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0
  libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3
  libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
  libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1
  libstdc++-9-dev libsub-override-perl libswitch-perl libtcl8.6 libthai-data
  libthai0 libtiff5 libtinfo5 libtk8.6 libtool libuchardet0 libwebp6 libx11-6
  libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
  libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db openssl
  pkg-config po-debconf r-base-core r-base-dev r-bioc-biocgenerics
  r-bioc-iranges r-bioc-s4vectors r-bioc-xvector r-bioc-zlibbioc r-cran-crayon
  sensible-utils ucf unzip x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation gcc-9-locales debtags dh-make gcc-9-doc gettext-doc libasprintf-dev
  libgettextpo-dev gfortran-doc gfortran-9-doc libcoarrays-dev groff
  liblapack-doc krb5-doc krb5-user icu-doc liblzma-doc ncurses-doc
  readline-doc libstdc++-9-doc tcl8.6 tk8.6 libtool-doc gcj-jdk m4-doc
  apparmor less www-browser libmail-box-perl elpa-ess r-doc-info | r-doc-pdf
  r-mathlib r-base-html texlive-base texlive-latex-base texlive-plain-generic
  texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
  texlive-latex-recommended texlive-latex-extra texinfo r-bioc-biobase
  r-bioc-genomicranges r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools
  r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 r-bioc-annotate
  r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-summarizedexperiment
  r-cran-matrix r-bioc-shortread r-bioc-graph r-cran-data.table
  r-cran-rstudioapi
Recommended packages:
  devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
  shared-mime-info xdg-user-dirs krb5-locales libgpm2 libpng-tools
  publicsuffix libltdl-dev libmail-sendmail-perl r-recommended r-doc-html
  r-cran-runit r-bioc-genomicranges r-cran-testthat r-cran-withr
  r-cran-mockery libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl
  x11-utils x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils ca-certificates
  dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
  fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
  gfortran-9 groff-base icu-devtools intltool-debian libarchive-zip-perl
  libblas-dev libblas3 libbrotli1 libbsd0 libbz2-dev libcairo2 libcroco3
  libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
  libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
  libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5 libglib2.0-0
  libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu-dev libicu63
  libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3
  libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblzma-dev
  libmagic-mgc libmagic1 libncurses-dev libncurses5-dev libncurses6
  libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
  libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0
  libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5
  libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5 libreadline-dev
  librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1 libsub-override-perl
  libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5 libtinfo5 libtk8.6
  libtool libuchardet0 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0
  libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
  libxss1 libxt6 m4 man-db openssl pkg-config po-debconf r-base-core
  r-base-dev r-bioc-biocgenerics r-bioc-iranges r-bioc-s4vectors
  r-bioc-xvector r-bioc-zlibbioc r-cran-crayon
  sbuild-build-depends-r-bioc-biostrings-dummy sensible-utils ucf unzip
  x11-common xauth xdg-utils zip zlib1g-dev
The following packages will be upgraded:
  cpp-9 g++-9 gcc-9 gcc-9-base libasan5 libgcc-9-dev libstdc++-9-dev
7 upgraded, 138 newly installed, 0 to remove and 15 not upgraded.
Need to get 117 MB of archives.
After this operation, 252 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-UCHkAL/apt_archive ./ sbuild-build-depends-r-bioc-biostrings-dummy 0.invalid.0 [944 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.2-1 [318 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.1-1 [1262 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf g++-9 armhf 9.3.0-13+rpi1 [8225 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf gcc-9 armhf 9.3.0-13+rpi1 [7731 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf cpp-9 armhf 9.3.0-13+rpi1 [7464 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libasan5 armhf 9.3.0-13+rpi1 [348 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libstdc++-9-dev armhf 9.3.0-13+rpi1 [1713 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libgcc-9-dev armhf 9.3.0-13+rpi1 [639 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf gcc-9-base armhf 9.3.0-13+rpi1 [197 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0042 [73.9 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-1 [775 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1g-1 [1272 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1g-1 [811 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20190110 [157 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.1 [187 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.8.1-1 [25.2 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.8.1-1 [14.9 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.2-1 [1158 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-3 [7987 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-5 [592 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.1 [1012 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf unzip armhf 6.0-25 [152 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-2 [108 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-2 [274 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.9-2 [298 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.9-2 [692 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.14-2 [110 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2 [101 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6.1 [255 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-7+rpi1 [61.5 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-7+rpi1 [112 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-7+rpi1 [318 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-7+rpi1 [135 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.40.0-1+b2 [74.2 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1 [53.9 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.68.0-1 [286 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.1.0-1+rpi1 [232 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-2 [1602 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-4.2 [416 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.4-1+rpi1 [1308 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b2 [36.4 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.44.7-4 [165 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.44.7-4 [52.6 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.44.7-4 [44.9 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [886 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libtk8.6 armhf 8.6.10-1 [678 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf r-base-core armhf 4.0.0-3 [24.6 MB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-9-dev armhf 9.3.0-13+rpi1 [278 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf gfortran-9 armhf 9.3.0-13+rpi1 [8108 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:9.2.1-3.1+rpi1 [1440 B]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.9.0-2 [113 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-2 [2981 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2-1 [79.5 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.2-1 [284 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libncurses5-dev armhf 6.2-1 [932 B]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libreadline-dev armhf 8.0-4 [116 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.34-7 [181 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix2 armhf 10.34-7 [44.7 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.34-7 [614 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-12 [234 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-12 [227 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-12 [564 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-2 [276 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-2 [27.7 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 63.2-3 [163 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-3 [8860 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf r-base-dev all 4.0.0-3 [4480 B]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf dh-r all 20200314 [39.1 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biocgenerics all 0.34.0-1 [639 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-s4vectors armhf 0.26.1-1 [2007 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-iranges armhf 2.22.2-1 [2280 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-zlibbioc all 1.34.0+dfsg-1 [8788 B]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-xvector armhf 0.28.0-1 [616 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf r-cran-crayon all 1.3.4-5 [750 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 117 MB in 44s (2641 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 12255 files and directories currently installed.)
Preparing to unpack .../000-libbsd0_0.10.0-1_armhf.deb ...
Unpacking libbsd0:armhf (0.10.0-1) ...
Selecting previously unselected package libtinfo5:armhf.
Preparing to unpack .../001-libtinfo5_6.2-1_armhf.deb ...
Unpacking libtinfo5:armhf (6.2-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../002-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../003-libuchardet0_0.0.6-3_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.6-3) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../004-groff-base_1.22.4-5_armhf.deb ...
Unpacking groff-base (1.22.4-5) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../005-libpipeline1_1.5.2-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.2-2) ...
Selecting previously unselected package man-db.
Preparing to unpack .../006-man-db_2.9.1-1_armhf.deb ...
Unpacking man-db (2.9.1-1) ...
Preparing to unpack .../007-g++-9_9.3.0-13+rpi1_armhf.deb ...
Unpacking g++-9 (9.3.0-13+rpi1) over (9.3.0-12+rpi1) ...
Preparing to unpack .../008-gcc-9_9.3.0-13+rpi1_armhf.deb ...
Unpacking gcc-9 (9.3.0-13+rpi1) over (9.3.0-12+rpi1) ...
Preparing to unpack .../009-cpp-9_9.3.0-13+rpi1_armhf.deb ...
Unpacking cpp-9 (9.3.0-13+rpi1) over (9.3.0-12+rpi1) ...
Preparing to unpack .../010-libasan5_9.3.0-13+rpi1_armhf.deb ...
Unpacking libasan5:armhf (9.3.0-13+rpi1) over (9.3.0-12+rpi1) ...
Preparing to unpack .../011-libstdc++-9-dev_9.3.0-13+rpi1_armhf.deb ...
Unpacking libstdc++-9-dev:armhf (9.3.0-13+rpi1) over (9.3.0-12+rpi1) ...
Preparing to unpack .../012-libgcc-9-dev_9.3.0-13+rpi1_armhf.deb ...
Unpacking libgcc-9-dev:armhf (9.3.0-13+rpi1) over (9.3.0-12+rpi1) ...
Preparing to unpack .../013-gcc-9-base_9.3.0-13+rpi1_armhf.deb ...
Unpacking gcc-9-base:armhf (9.3.0-13+rpi1) over (9.3.0-12+rpi1) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../014-sensible-utils_0.0.12+nmu1_all.deb ...
Unpacking sensible-utils (0.0.12+nmu1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../015-libmagic-mgc_1%3a5.38-5_armhf.deb ...
Unpacking libmagic-mgc (1:5.38-5) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../016-libmagic1_1%3a5.38-5_armhf.deb ...
Unpacking libmagic1:armhf (1:5.38-5) ...
Selecting previously unselected package file.
Preparing to unpack .../017-file_1%3a5.38-5_armhf.deb ...
Unpacking file (1:5.38-5) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../018-gettext-base_0.19.8.1-10_armhf.deb ...
Unpacking gettext-base (0.19.8.1-10) ...
Selecting previously unselected package libswitch-perl.
Preparing to unpack .../019-libswitch-perl_2.17-2_all.deb ...
Unpacking libswitch-perl (2.17-2) ...
Selecting previously unselected package ucf.
Preparing to unpack .../020-ucf_3.0042_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0042) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../021-libsigsegv2_2.12-2_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../022-m4_1.4.18-4_armhf.deb ...
Unpacking m4 (1.4.18-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../023-autoconf_2.69-11.1_all.deb ...
Unpacking autoconf (2.69-11.1) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../024-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../025-automake_1%3a1.16.2-1_all.deb ...
Unpacking automake (1:1.16.2-1) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../026-autopoint_0.19.8.1-10_all.deb ...
Unpacking autopoint (0.19.8.1-10) ...
Selecting previously unselected package libssl1.1:armhf.
Preparing to unpack .../027-libssl1.1_1.1.1g-1_armhf.deb ...
Unpacking libssl1.1:armhf (1.1.1g-1) ...
Selecting previously unselected package openssl.
Preparing to unpack .../028-openssl_1.1.1g-1_armhf.deb ...
Unpacking openssl (1.1.1g-1) ...
Selecting previously unselected package ca-certificates.
Preparing to unpack .../029-ca-certificates_20190110_all.deb ...
Unpacking ca-certificates (20190110) ...
Selecting previously unselected package dctrl-tools.
Preparing to unpack .../030-dctrl-tools_2.24-3_armhf.deb ...
Unpacking dctrl-tools (2.24-3) ...
Selecting previously unselected package libtool.
Preparing to unpack .../031-libtool_2.4.6-14_all.deb ...
Unpacking libtool (2.4.6-14) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../032-dh-autoreconf_19_all.deb ...
Unpacking dh-autoreconf (19) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../033-libdebhelper-perl_13.1_all.deb ...
Unpacking libdebhelper-perl (13.1) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../034-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../035-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../036-libfile-stripnondeterminism-perl_1.8.1-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.8.1-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../037-dh-strip-nondeterminism_1.8.1-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.8.1-1) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../038-libelf1_0.176-1.1_armhf.deb ...
Unpacking libelf1:armhf (0.176-1.1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../039-dwz_0.13-5_armhf.deb ...
Unpacking dwz (0.13-5) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../040-libglib2.0-0_2.64.2-1_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.64.2-1) ...
Selecting previously unselected package libicu63:armhf.
Preparing to unpack .../041-libicu63_63.2-3_armhf.deb ...
Unpacking libicu63:armhf (63.2-3) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../042-libxml2_2.9.10+dfsg-5_armhf.deb ...
Unpacking libxml2:armhf (2.9.10+dfsg-5) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../043-libcroco3_0.6.13-1_armhf.deb ...
Unpacking libcroco3:armhf (0.6.13-1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../044-gettext_0.19.8.1-10_armhf.deb ...
Unpacking gettext (0.19.8.1-10) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../045-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../046-po-debconf_1.0.21_all.deb ...
Unpacking po-debconf (1.0.21) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../047-debhelper_13.1_all.deb ...
Unpacking debhelper (13.1) ...
Selecting previously unselected package zip.
Preparing to unpack .../048-zip_3.0-11_armhf.deb ...
Unpacking zip (3.0-11) ...
Selecting previously unselected package unzip.
Preparing to unpack .../049-unzip_6.0-25_armhf.deb ...
Unpacking unzip (6.0-25) ...
Selecting previously unselected package libpaper1:armhf.
Preparing to unpack .../050-libpaper1_1.1.28_armhf.deb ...
Unpacking libpaper1:armhf (1.1.28) ...
Selecting previously unselected package libpaper-utils.
Preparing to unpack .../051-libpaper-utils_1.1.28_armhf.deb ...
Unpacking libpaper-utils (1.1.28) ...
Selecting previously unselected package xdg-utils.
Preparing to unpack .../052-xdg-utils_1.1.3-2_all.deb ...
Unpacking xdg-utils (1.1.3-2) ...
Selecting previously unselected package libblas3:armhf.
Preparing to unpack .../053-libblas3_3.9.0-2_armhf.deb ...
Unpacking libblas3:armhf (3.9.0-2) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../054-libexpat1_2.2.9-1_armhf.deb ...
Unpacking libexpat1:armhf (2.2.9-1) ...
Selecting previously unselected package libpng16-16:armhf.
Preparing to unpack .../055-libpng16-16_1.6.37-2_armhf.deb ...
Unpacking libpng16-16:armhf (1.6.37-2) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../056-libfreetype6_2.10.1-2_armhf.deb ...
Unpacking libfreetype6:armhf (2.10.1-2) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../057-fonts-dejavu-core_2.37-1_all.deb ...
Unpacking fonts-dejavu-core (2.37-1) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../058-fontconfig-config_2.13.1-4.2_all.deb ...
Unpacking fontconfig-config (2.13.1-4.2) ...
Selecting previously unselected package libfontconfig1:armhf.
Preparing to unpack .../059-libfontconfig1_2.13.1-4.2_armhf.deb ...
Unpacking libfontconfig1:armhf (2.13.1-4.2) ...
Selecting previously unselected package libpixman-1-0:armhf.
Preparing to unpack .../060-libpixman-1-0_0.36.0-1_armhf.deb ...
Unpacking libpixman-1-0:armhf (0.36.0-1) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../061-libxau6_1%3a1.0.8-1+b2_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.8-1+b2) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../062-libxdmcp6_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../063-libxcb1_1.14-2_armhf.deb ...
Unpacking libxcb1:armhf (1.14-2) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../064-libx11-data_2%3a1.6.9-2_all.deb ...
Unpacking libx11-data (2:1.6.9-2) ...
Selecting previously unselected package libx11-6:armhf.
Preparing to unpack .../065-libx11-6_2%3a1.6.9-2_armhf.deb ...
Unpacking libx11-6:armhf (2:1.6.9-2) ...
Selecting previously unselected package libxcb-render0:armhf.
Preparing to unpack .../066-libxcb-render0_1.14-2_armhf.deb ...
Unpacking libxcb-render0:armhf (1.14-2) ...
Selecting previously unselected package libxcb-shm0:armhf.
Preparing to unpack .../067-libxcb-shm0_1.14-2_armhf.deb ...
Unpacking libxcb-shm0:armhf (1.14-2) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../068-libxext6_2%3a1.3.3-1+b2_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.3-1+b2) ...
Selecting previously unselected package libxrender1:armhf.
Preparing to unpack .../069-libxrender1_1%3a0.9.10-1_armhf.deb ...
Unpacking libxrender1:armhf (1:0.9.10-1) ...
Selecting previously unselected package libcairo2:armhf.
Preparing to unpack .../070-libcairo2_1.16.0-4_armhf.deb ...
Unpacking libcairo2:armhf (1.16.0-4) ...
Selecting previously unselected package libbrotli1:armhf.
Preparing to unpack .../071-libbrotli1_1.0.7-6.1_armhf.deb ...
Unpacking libbrotli1:armhf (1.0.7-6.1) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../072-libkrb5support0_1.17-7+rpi1_armhf.deb ...
Unpacking libkrb5support0:armhf (1.17-7+rpi1) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../073-libk5crypto3_1.17-7+rpi1_armhf.deb ...
Unpacking libk5crypto3:armhf (1.17-7+rpi1) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../074-libkeyutils1_1.6.1-2_armhf.deb ...
Unpacking libkeyutils1:armhf (1.6.1-2) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../075-libkrb5-3_1.17-7+rpi1_armhf.deb ...
Unpacking libkrb5-3:armhf (1.17-7+rpi1) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../076-libgssapi-krb5-2_1.17-7+rpi1_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.17-7+rpi1) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../077-libnghttp2-14_1.40.0-1+b2_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.40.0-1+b2) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../078-libpsl5_0.21.0-1_armhf.deb ...
Unpacking libpsl5:armhf (0.21.0-1) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../079-librtmp1_2.4+20151223.gitfa8646d.1-2+b1_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../080-libssh2-1_1.8.0-2.1_armhf.deb ...
Unpacking libssh2-1:armhf (1.8.0-2.1) ...
Selecting previously unselected package libcurl4:armhf.
Preparing to unpack .../081-libcurl4_7.68.0-1_armhf.deb ...
Unpacking libcurl4:armhf (7.68.0-1) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../082-libjpeg62-turbo_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package libgfortran5:armhf.
Preparing to unpack .../083-libgfortran5_10.1.0-1+rpi1_armhf.deb ...
Unpacking libgfortran5:armhf (10.1.0-1+rpi1) ...
Selecting previously unselected package liblapack3:armhf.
Preparing to unpack .../084-liblapack3_3.9.0-2_armhf.deb ...
Unpacking liblapack3:armhf (3.9.0-2) ...
Selecting previously unselected package fontconfig.
Preparing to unpack .../085-fontconfig_2.13.1-4.2_armhf.deb ...
Unpacking fontconfig (2.13.1-4.2) ...
Selecting previously unselected package libfribidi0:armhf.
Preparing to unpack .../086-libfribidi0_1.0.8-2_armhf.deb ...
Unpacking libfribidi0:armhf (1.0.8-2) ...
Selecting previously unselected package libgraphite2-3:armhf.
Preparing to unpack .../087-libgraphite2-3_1.3.14-1_armhf.deb ...
Unpacking libgraphite2-3:armhf (1.3.14-1) ...
Selecting previously unselected package libharfbuzz0b:armhf.
Preparing to unpack .../088-libharfbuzz0b_2.6.4-1+rpi1_armhf.deb ...
Unpacking libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Selecting previously unselected package libthai-data.
Preparing to unpack .../089-libthai-data_0.1.28-3_all.deb ...
Unpacking libthai-data (0.1.28-3) ...
Selecting previously unselected package libdatrie1:armhf.
Preparing to unpack .../090-libdatrie1_0.2.12-3+b2_armhf.deb ...
Unpacking libdatrie1:armhf (0.2.12-3+b2) ...
Selecting previously unselected package libthai0:armhf.
Preparing to unpack .../091-libthai0_0.1.28-3_armhf.deb ...
Unpacking libthai0:armhf (0.1.28-3) ...
Selecting previously unselected package libpango-1.0-0:armhf.
Preparing to unpack .../092-libpango-1.0-0_1.44.7-4_armhf.deb ...
Unpacking libpango-1.0-0:armhf (1.44.7-4) ...
Selecting previously unselected package libpangoft2-1.0-0:armhf.
Preparing to unpack .../093-libpangoft2-1.0-0_1.44.7-4_armhf.deb ...
Unpacking libpangoft2-1.0-0:armhf (1.44.7-4) ...
Selecting previously unselected package libpangocairo-1.0-0:armhf.
Preparing to unpack .../094-libpangocairo-1.0-0_1.44.7-4_armhf.deb ...
Unpacking libpangocairo-1.0-0:armhf (1.44.7-4) ...
Selecting previously unselected package libtcl8.6:armhf.
Preparing to unpack .../095-libtcl8.6_8.6.10+dfsg-1_armhf.deb ...
Unpacking libtcl8.6:armhf (8.6.10+dfsg-1) ...
Selecting previously unselected package libjbig0:armhf.
Preparing to unpack .../096-libjbig0_2.1-3.1+b2_armhf.deb ...
Unpacking libjbig0:armhf (2.1-3.1+b2) ...
Selecting previously unselected package libwebp6:armhf.
Preparing to unpack .../097-libwebp6_0.6.1-2_armhf.deb ...
Unpacking libwebp6:armhf (0.6.1-2) ...
Selecting previously unselected package libtiff5:armhf.
Preparing to unpack .../098-libtiff5_4.1.0+git191117-2_armhf.deb ...
Unpacking libtiff5:armhf (4.1.0+git191117-2) ...
Selecting previously unselected package libxft2:armhf.
Preparing to unpack .../099-libxft2_2.3.2-2_armhf.deb ...
Unpacking libxft2:armhf (2.3.2-2) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../100-x11-common_1%3a7.7+20_all.deb ...
Unpacking x11-common (1:7.7+20) ...
Selecting previously unselected package libxss1:armhf.
Preparing to unpack .../101-libxss1_1%3a1.2.3-1_armhf.deb ...
Unpacking libxss1:armhf (1:1.2.3-1) ...
Selecting previously unselected package libtk8.6:armhf.
Preparing to unpack .../102-libtk8.6_8.6.10-1_armhf.deb ...
Unpacking libtk8.6:armhf (8.6.10-1) ...
Selecting previously unselected package libice6:armhf.
Preparing to unpack .../103-libice6_2%3a1.0.9-2_armhf.deb ...
Unpacking libice6:armhf (2:1.0.9-2) ...
Selecting previously unselected package libsm6:armhf.
Preparing to unpack .../104-libsm6_2%3a1.2.3-1_armhf.deb ...
Unpacking libsm6:armhf (2:1.2.3-1) ...
Selecting previously unselected package libxt6:armhf.
Preparing to unpack .../105-libxt6_1%3a1.1.5-1+b3_armhf.deb ...
Unpacking libxt6:armhf (1:1.1.5-1+b3) ...
Selecting previously unselected package r-base-core.
Preparing to unpack .../106-r-base-core_4.0.0-3_armhf.deb ...
Unpacking r-base-core (4.0.0-3) ...
Selecting previously unselected package libgfortran-9-dev:armhf.
Preparing to unpack .../107-libgfortran-9-dev_9.3.0-13+rpi1_armhf.deb ...
Unpacking libgfortran-9-dev:armhf (9.3.0-13+rpi1) ...
Selecting previously unselected package gfortran-9.
Preparing to unpack .../108-gfortran-9_9.3.0-13+rpi1_armhf.deb ...
Unpacking gfortran-9 (9.3.0-13+rpi1) ...
Selecting previously unselected package gfortran.
Preparing to unpack .../109-gfortran_4%3a9.2.1-3.1+rpi1_armhf.deb ...
Unpacking gfortran (4:9.2.1-3.1+rpi1) ...
Selecting previously unselected package libblas-dev:armhf.
Preparing to unpack .../110-libblas-dev_3.9.0-2_armhf.deb ...
Unpacking libblas-dev:armhf (3.9.0-2) ...
Selecting previously unselected package liblapack-dev:armhf.
Preparing to unpack .../111-liblapack-dev_3.9.0-2_armhf.deb ...
Unpacking liblapack-dev:armhf (3.9.0-2) ...
Selecting previously unselected package libncurses6:armhf.
Preparing to unpack .../112-libncurses6_6.2-1_armhf.deb ...
Unpacking libncurses6:armhf (6.2-1) ...
Selecting previously unselected package libncurses-dev:armhf.
Preparing to unpack .../113-libncurses-dev_6.2-1_armhf.deb ...
Unpacking libncurses-dev:armhf (6.2-1) ...
Selecting previously unselected package libncurses5-dev:armhf.
Preparing to unpack .../114-libncurses5-dev_6.2-1_armhf.deb ...
Unpacking libncurses5-dev:armhf (6.2-1) ...
Selecting previously unselected package libreadline-dev:armhf.
Preparing to unpack .../115-libreadline-dev_8.0-4_armhf.deb ...
Unpacking libreadline-dev:armhf (8.0-4) ...
Selecting previously unselected package libjpeg62-turbo-dev:armhf.
Preparing to unpack .../116-libjpeg62-turbo-dev_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package libjpeg-dev.
Preparing to unpack .../117-libjpeg-dev_1%3a1.5.2-2_all.deb ...
Unpacking libjpeg-dev (1:1.5.2-2) ...
Selecting previously unselected package libpcre2-16-0:armhf.
Preparing to unpack .../118-libpcre2-16-0_10.34-7_armhf.deb ...
Unpacking libpcre2-16-0:armhf (10.34-7) ...
Selecting previously unselected package libpcre2-32-0:armhf.
Preparing to unpack .../119-libpcre2-32-0_10.34-7_armhf.deb ...
Unpacking libpcre2-32-0:armhf (10.34-7) ...
Selecting previously unselected package libpcre2-posix2:armhf.
Preparing to unpack .../120-libpcre2-posix2_10.34-7_armhf.deb ...
Unpacking libpcre2-posix2:armhf (10.34-7) ...
Selecting previously unselected package libpcre2-dev:armhf.
Preparing to unpack .../121-libpcre2-dev_10.34-7_armhf.deb ...
Unpacking libpcre2-dev:armhf (10.34-7) ...
Selecting previously unselected package libpcre16-3:armhf.
Preparing to unpack .../122-libpcre16-3_2%3a8.39-12_armhf.deb ...
Unpacking libpcre16-3:armhf (2:8.39-12) ...
Selecting previously unselected package libpcre32-3:armhf.
Preparing to unpack .../123-libpcre32-3_2%3a8.39-12_armhf.deb ...
Unpacking libpcre32-3:armhf (2:8.39-12) ...
Selecting previously unselected package libpcrecpp0v5:armhf.
Preparing to unpack .../124-libpcrecpp0v5_2%3a8.39-12_armhf.deb ...
Unpacking libpcrecpp0v5:armhf (2:8.39-12) ...
Selecting previously unselected package libpcre3-dev:armhf.
Preparing to unpack .../125-libpcre3-dev_2%3a8.39-12_armhf.deb ...
Unpacking libpcre3-dev:armhf (2:8.39-12) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../126-zlib1g-dev_1%3a1.2.11.dfsg-2_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Selecting previously unselected package libpng-dev:armhf.
Preparing to unpack .../127-libpng-dev_1.6.37-2_armhf.deb ...
Unpacking libpng-dev:armhf (1.6.37-2) ...
Selecting previously unselected package libbz2-dev:armhf.
Preparing to unpack .../128-libbz2-dev_1.0.8-2_armhf.deb ...
Unpacking libbz2-dev:armhf (1.0.8-2) ...
Selecting previously unselected package liblzma-dev:armhf.
Preparing to unpack .../129-liblzma-dev_5.2.4-1_armhf.deb ...
Unpacking liblzma-dev:armhf (5.2.4-1) ...
Selecting previously unselected package icu-devtools.
Preparing to unpack .../130-icu-devtools_63.2-3_armhf.deb ...
Unpacking icu-devtools (63.2-3) ...
Selecting previously unselected package libicu-dev:armhf.
Preparing to unpack .../131-libicu-dev_63.2-3_armhf.deb ...
Unpacking libicu-dev:armhf (63.2-3) ...
Selecting previously unselected package libxmuu1:armhf.
Preparing to unpack .../132-libxmuu1_2%3a1.1.2-2+b3_armhf.deb ...
Unpacking libxmuu1:armhf (2:1.1.2-2+b3) ...
Selecting previously unselected package xauth.
Preparing to unpack .../133-xauth_1%3a1.0.10-1_armhf.deb ...
Unpacking xauth (1:1.0.10-1) ...
Selecting previously unselected package pkg-config.
Preparing to unpack .../134-pkg-config_0.29.2-1_armhf.deb ...
Unpacking pkg-config (0.29.2-1) ...
Selecting previously unselected package r-base-dev.
Preparing to unpack .../135-r-base-dev_4.0.0-3_all.deb ...
Unpacking r-base-dev (4.0.0-3) ...
Selecting previously unselected package libfile-which-perl.
Preparing to unpack .../136-libfile-which-perl_1.23-1_all.deb ...
Unpacking libfile-which-perl (1.23-1) ...
Selecting previously unselected package dh-r.
Preparing to unpack .../137-dh-r_20200314_all.deb ...
Unpacking dh-r (20200314) ...
Selecting previously unselected package r-bioc-biocgenerics.
Preparing to unpack .../138-r-bioc-biocgenerics_0.34.0-1_all.deb ...
Unpacking r-bioc-biocgenerics (0.34.0-1) ...
Selecting previously unselected package r-bioc-s4vectors.
Preparing to unpack .../139-r-bioc-s4vectors_0.26.1-1_armhf.deb ...
Unpacking r-bioc-s4vectors (0.26.1-1) ...
Selecting previously unselected package r-bioc-iranges.
Preparing to unpack .../140-r-bioc-iranges_2.22.2-1_armhf.deb ...
Unpacking r-bioc-iranges (2.22.2-1) ...
Selecting previously unselected package r-bioc-zlibbioc.
Preparing to unpack .../141-r-bioc-zlibbioc_1.34.0+dfsg-1_all.deb ...
Unpacking r-bioc-zlibbioc (1.34.0+dfsg-1) ...
Selecting previously unselected package r-bioc-xvector.
Preparing to unpack .../142-r-bioc-xvector_0.28.0-1_armhf.deb ...
Unpacking r-bioc-xvector (0.28.0-1) ...
Selecting previously unselected package r-cran-crayon.
Preparing to unpack .../143-r-cran-crayon_1.3.4-5_all.deb ...
Unpacking r-cran-crayon (1.3.4-5) ...
Selecting previously unselected package sbuild-build-depends-r-bioc-biostrings-dummy.
Preparing to unpack .../144-sbuild-build-depends-r-bioc-biostrings-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-r-bioc-biostrings-dummy (0.invalid.0) ...
Setting up libexpat1:armhf (2.2.9-1) ...
Setting up libpcrecpp0v5:armhf (2:8.39-12) ...
Setting up libpipeline1:armhf (1.5.2-2) ...
Setting up libgraphite2-3:armhf (1.3.14-1) ...
Setting up libpixman-1-0:armhf (0.36.0-1) ...
Setting up libfile-which-perl (1.23-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up libkeyutils1:armhf (1.6.1-2) ...
Setting up libpsl5:armhf (0.21.0-1) ...
Setting up libpcre16-3:armhf (2:8.39-12) ...
Setting up libdatrie1:armhf (0.2.12-3+b2) ...
Setting up libmagic-mgc (1:5.38-5) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.64.2-1) ...
No schema files found: doing nothing.
Setting up libssl1.1:armhf (1.1.1g-1) ...
Setting up unzip (6.0-25) ...
Setting up libdebhelper-perl (13.1) ...
Setting up libbrotli1:armhf (1.0.7-6.1) ...
Setting up x11-common (1:7.7+20) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
invoke-rc.d: WARNING: No init system and policy-rc.d missing! Defaulting to block.
Setting up libnghttp2-14:armhf (1.40.0-1+b2) ...
Setting up libmagic1:armhf (1:5.38-5) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up file (1:5.38-5) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libpcre2-16-0:armhf (10.34-7) ...
Setting up libicu63:armhf (63.2-3) ...
Setting up libkrb5support0:armhf (1.17-7+rpi1) ...
Setting up zip (3.0-11) ...
Setting up autotools-dev (20180224.1) ...
Setting up libpcre2-32-0:armhf (10.34-7) ...
Setting up libblas3:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libswitch-perl (2.17-2) ...
Setting up libx11-data (2:1.6.9-2) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Setting up libncurses6:armhf (6.2-1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libfribidi0:armhf (1.0.8-2) ...
Setting up libpng16-16:armhf (1.6.37-2) ...
Setting up libpcre32-3:armhf (2:8.39-12) ...
Setting up libtcl8.6:armhf (8.6.10+dfsg-1) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up icu-devtools (63.2-3) ...
Setting up pkg-config (0.29.2-1) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up libpcre2-posix2:armhf (10.34-7) ...
Setting up libk5crypto3:armhf (1.17-7+rpi1) ...
Setting up libgfortran5:armhf (10.1.0-1+rpi1) ...
Setting up liblzma-dev:armhf (5.2.4-1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libthai-data (0.1.28-3) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up libkrb5-3:armhf (1.17-7+rpi1) ...
Setting up libtiff5:armhf (4.1.0+git191117-2) ...
Setting up openssl (1.1.1g-1) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.2-1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libicu-dev:armhf (63.2-3) ...
Setting up libxml2:armhf (2.9.10+dfsg-5) ...
Setting up xdg-utils (1.1.3-2) ...
Setting up libblas-dev:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up dctrl-tools (2.24-3) ...
Setting up gcc-9-base:armhf (9.3.0-13+rpi1) ...
Setting up libbz2-dev:armhf (1.0.8-2) ...
Setting up libfile-stripnondeterminism-perl (1.8.1-1) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncurses-dev:armhf (6.2-1) ...
Setting up libxcb1:armhf (1.14-2) ...
Setting up libpcre2-dev:armhf (10.34-7) ...
Setting up libtool (2.4.6-14) ...
Setting up libxcb-render0:armhf (1.14-2) ...
Setting up libpcre3-dev:armhf (2:8.39-12) ...
Setting up libpng-dev:armhf (1.6.37-2) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up m4 (1.4.18-4) ...
Setting up libxcb-shm0:armhf (1.14-2) ...
Setting up libreadline-dev:armhf (8.0-4) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
128 added, 0 removed; done.
Setting up libasan5:armhf (9.3.0-13+rpi1) ...
Setting up libfreetype6:armhf (2.10.1-2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up liblapack-dev:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-7+rpi1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up ucf (3.0042) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.8.1-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up libncurses5-dev:armhf (6.2-1) ...
Setting up cpp-9 (9.3.0-13+rpi1) ...
Setting up libcurl4:armhf (7.68.0-1) ...
Setting up libx11-6:armhf (2:1.6.9-2) ...
Setting up libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2+b3) ...
Setting up automake (1:1.16.2-1) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libpaper1:armhf (1.1.28) ...

Creating config file /etc/papersize with new version
Setting up gettext (0.19.8.1-10) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up fontconfig-config (2.13.1-4.2) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libpaper-utils (1.1.28) ...
Setting up man-db (2.9.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libgcc-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libfontconfig1:armhf (2.13.1-4.2) ...
Setting up gcc-9 (9.3.0-13+rpi1) ...
Setting up fontconfig (2.13.1-4.2) ...
Regenerating fonts cache... done.
Setting up libxft2:armhf (2.3.2-2) ...
Setting up libstdc++-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up po-debconf (1.0.21) ...
Setting up libtk8.6:armhf (8.6.10-1) ...
Setting up libpango-1.0-0:armhf (1.44.7-4) ...
Setting up libgfortran-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up g++-9 (9.3.0-13+rpi1) ...
Setting up libpangoft2-1.0-0:armhf (1.44.7-4) ...
Setting up libpangocairo-1.0-0:armhf (1.44.7-4) ...
Setting up gfortran-9 (9.3.0-13+rpi1) ...
Setting up gfortran (4:9.2.1-3.1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up r-base-core (4.0.0-3) ...

Creating config file /etc/R/Renviron with new version
Setting up r-cran-crayon (1.3.4-5) ...
Setting up r-bioc-biocgenerics (0.34.0-1) ...
Setting up r-base-dev (4.0.0-3) ...
Setting up r-bioc-zlibbioc (1.34.0+dfsg-1) ...
Setting up r-bioc-s4vectors (0.26.1-1) ...
Setting up r-bioc-iranges (2.22.2-1) ...
Setting up r-bioc-xvector (0.28.0-1) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.1) ...
Setting up dh-r (20200314) ...
Setting up sbuild-build-depends-r-bioc-biostrings-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.30-8+rpi1) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.34-8+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-13+rpi1 gcc-9_9.3.0-13+rpi1 libc6-dev_2.30-8+rpi1 libstdc++-9-dev_9.3.0-13+rpi1 libstdc++6_10.1.0-1+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_2.1.4 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-8+rpi1 binutils-arm-linux-gnueabihf_2.34-8+rpi1 binutils-common_2.34-8+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.35.1-5 build-essential_12.8 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-13+rpi1 dash_0.5.10.2-7 dctrl-tools_2.24-3 debconf_1.5.74 debhelper_13.1 debianutils_4.9.1 dh-autoreconf_19 dh-r_20200314 dh-strip-nondeterminism_1.8.1-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.1-5 file_1:5.38-5 findutils_4.7.0-1 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-13+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10.1.0-1+rpi1 gcc-9_9.3.0-13+rpi1 gcc-9-base_9.3.0-13+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:9.2.1-3.1+rpi1 gfortran-9_9.3.0-13+rpi1 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 icu-devtools_63.2-3 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 libacl1_2.2.53-8 libapt-pkg6.0_2.1.4 libarchive-zip-perl_1.68-1 libasan5_9.3.0-13+rpi1 libassuan0_2.5.3-7 libatomic1_10.1.0-1+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-8+rpi1 libblas-dev_3.9.0-2 libblas3_3.9.0-2 libblkid1_2.35.1-5 libbrotli1_1.0.7-6.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libbz2-dev_1.0.8-2 libc-bin_2.30-8+rpi1 libc-dev-bin_2.30-8+rpi1 libc6_2.30-8+rpi1 libc6-dev_2.30-8+rpi1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.1+b1 libcap2_1:2.34-2 libcap2-bin_1:2.34-2 libcc1-0_10.1.0-1+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-8+rpi1 libctf0_2.34-8+rpi1 libcurl4_7.68.0-1 libdatrie1_0.2.12-3+b2 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.252 libdebhelper-perl_13.1 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.1-5 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.8.1-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-4.2 libfreetype6_2.10.1-2 libfribidi0_1.0.8-2 libgcc-9-dev_9.3.0-13+rpi1 libgcc-s1_10.1.0-1+rpi1 libgcc1_1:10.1.0-1+rpi1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-9-dev_9.3.0-13+rpi1 libgfortran5_10.1.0-1+rpi1 libglib2.0-0_2.64.2-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2 libgomp1_10.1.0-1+rpi1 libgpg-error0_1.37-1 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.17-7+rpi1 libharfbuzz0b_2.6.4-1+rpi1 libhogweed5_3.5.1+really3.5.1-2 libice6_2:1.0.9-2 libicu-dev_63.2-3 libicu63_63.2-3 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libk5crypto3_1.17-7+rpi1 libkeyutils1_1.6.1-2 libkrb5-3_1.17-7+rpi1 libkrb5support0_1.17-7+rpi1 libksba8_1.3.5-2 liblapack-dev_3.9.0-2 liblapack3_3.9.0-2 libldap-2.4-2_2.4.50+dfsg-1 libldap-common_2.4.50+dfsg-1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.1-5 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses-dev_6.2-1 libncurses5-dev_6.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1+b2 libnpth0_1.6-1 libp11-kit0_0.23.20-1 libpam-cap_1:2.34-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpango-1.0-0_1.44.7-4 libpangocairo-1.0-0_1.44.7-4 libpangoft2-1.0-0_1.44.7-4 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre16-3_2:8.39-12 libpcre2-16-0_10.34-7 libpcre2-32-0_10.34-7 libpcre2-8-0_10.34-7 libpcre2-dev_10.34-7 libpcre2-posix2_10.34-7 libpcre3_2:8.39-12 libpcre3-dev_2:8.39-12 libpcre32-3_2:8.39-12 libpcrecpp0v5_2:8.39-12 libperl5.30_5.30.0-10 libpipeline1_1.5.2-2 libpixman-1-0_0.36.0-1 libpng-dev_1.6.37-2 libpng16-16_1.6.37-2 libpsl5_0.21.0-1 libreadline-dev_8.0-4 libreadline7_7.0-5 libreadline8_8.0-4 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 librust-rand-core-dev_0.5.1-1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.0-1+b1 libsemanage-common_3.0-1 libsemanage1_3.0-1+b1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.35.1-5 libsqlite3-0_3.31.1-5 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libstdc++-9-dev_9.3.0-13+rpi1 libstdc++6_10.1.0-1+rpi1 libsub-override-perl_0.09-2 libswitch-perl_2.17-2 libsystemd0_245.5-3+rpi1 libtasn1-6_4.16.0-2 libtcl8.6_8.6.10+dfsg-1 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-2 libtinfo5_6.2-1 libtinfo6_6.2-1 libtk8.6_8.6.10-1 libtool_2.4.6-14 libubsan1_10.1.0-1+rpi1 libuchardet0_0.0.6-3 libudev1_245.5-3+rpi1 libunistring2_0.9.10-2 libuuid1_2.35.1-5 libwebp6_0.6.1-2 libx11-6_2:1.6.9-2 libx11-data_2:1.6.9-2 libxau6_1:1.0.8-1+b2 libxcb-render0_1.14-2 libxcb-shm0_1.14-2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.10+dfsg-5 libxmuu1_2:1.1.2-2+b3 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.1.5-1+b3 libzstd1_1.4.4+dfsg-3+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.35.1-5 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 openssl_1.1.1g-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-10 perl-base_5.30.0-10 perl-modules-5.30_5.30.0-10 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21 r-base-core_4.0.0-3 r-base-dev_4.0.0-3 r-bioc-biocgenerics_0.34.0-1 r-bioc-iranges_2.22.2-1 r-bioc-s4vectors_0.26.1-1 r-bioc-xvector_0.28.0-1 r-bioc-zlibbioc_1.34.0+dfsg-1 r-cran-crayon_1.3.4-5 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-biostrings-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0042 unzip_6.0-25 util-linux_2.35.1-5 x11-common_1:7.7+20 xauth_1:1.0.10-1 xdg-utils_1.1.3-2 xz-utils_5.2.4-1 zip_3.0-11 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon May 18 06:35:24 2020 UTC
gpgv:                using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-bioc-biostrings_2.56.0-1.dsc
dpkg-source: info: extracting r-bioc-biostrings in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-bioc-biostrings_2.56.0.orig.tar.gz
dpkg-source: info: unpacking r-bioc-biostrings_2.56.0-1.debian.tar.xz

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-ffed540d-23a5-442b-b33c-055c38a2717d
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package r-bioc-biostrings
dpkg-buildpackage: info: source version 2.56.0-1
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --buildsystem R
   dh_auto_clean -O--buildsystem=R
   dh_autoreconf_clean -O--buildsystem=R
   dh_clean -O--buildsystem=R
 debian/rules binary-arch
dh binary-arch --buildsystem R
   dh_update_autotools_config -a -O--buildsystem=R
   dh_autoreconf -a -O--buildsystem=R
   dh_auto_configure -a -O--buildsystem=R
   dh_auto_build -a -O--buildsystem=R
   dh_auto_test -a -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=R
   dh_prep -a -O--buildsystem=R
   dh_auto_install -a -O--buildsystem=R
I: R packages needed for DEP8: runit
I: R Package: Biostrings Version: 2.56.0
I: Building using R version 4.0.0-3
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Mon, 18 May 2020 08:21:02 +0200
	mkdir -p /<<PKGBUILDDIR>>/debian/r-bioc-biostrings/usr/lib/R/site-library
	R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-bioc-biostrings/usr/lib/R/site-library --clean . "--built-timestamp='Mon, 18 May 2020 08:21:02 +0200'"
* installing *source* package 'Biostrings' ...
** using staged installation
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c BAB_class.c -o BAB_class.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c BitMatrix.c -o BitMatrix.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c IRanges_stubs.c -o IRanges_stubs.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c MIndex_class.c -o MIndex_class.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c PreprocessedTB_class.c -o PreprocessedTB_class.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c R_init_Biostrings.c -o R_init_Biostrings.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c RoSeqs_utils.c -o RoSeqs_utils.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c S4Vectors_stubs.c -o S4Vectors_stubs.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c SparseList_utils.c -o SparseList_utils.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c XStringSetList_class.c -o XStringSetList_class.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c XStringSet_class.c -o XStringSet_class.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c XString_class.c -o XString_class.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c XVector_stubs.c -o XVector_stubs.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c align_needwunsQS.c -o align_needwunsQS.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c align_pairwiseAlignment.c -o align_pairwiseAlignment.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c align_utils.c -o align_utils.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c find_palindromes.c -o find_palindromes.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c gtestsim.c -o gtestsim.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c inject_code.c -o inject_code.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c letter_frequency.c -o letter_frequency.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c lowlevel_matching.c -o lowlevel_matching.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c match_PWM.c -o match_PWM.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c match_pattern.c -o match_pattern.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c match_pattern_boyermoore.c -o match_pattern_boyermoore.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c match_pattern_indels.c -o match_pattern_indels.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c match_pattern_shiftor.c -o match_pattern_shiftor.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c match_pdict.c -o match_pdict.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c match_pdict_ACtree2.c -o match_pdict_ACtree2.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c match_pdict_Twobit.c -o match_pdict_Twobit.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c match_pdict_utils.c -o match_pdict_utils.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c match_reporting.c -o match_reporting.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c matchprobes.c -o matchprobes.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c pmatchPattern.c -o pmatchPattern.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c read_fasta_files.c -o read_fasta_files.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c read_fastq_files.c -o read_fastq_files.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c replaceAt.c -o replaceAt.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c replace_letter_at.c -o replace_letter_at.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c strutils.c -o strutils.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c translate.c -o translate.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c unstrsplit_methods.c -o unstrsplit_methods.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c utils.c -o utils.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG  -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include'    -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c xscat.c -o xscat.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o Biostrings.so BAB_class.o BitMatrix.o IRanges_stubs.o MIndex_class.o PreprocessedTB_class.o R_init_Biostrings.o RoSeqs_utils.o S4Vectors_stubs.o SparseList_utils.o XStringSetList_class.o XStringSet_class.o XString_class.o XVector_stubs.o align_needwunsQS.o align_pairwiseAlignment.o align_utils.o find_palindromes.o gtestsim.o inject_code.o letter_frequency.o lowlevel_matching.o match_PWM.o match_pattern.o match_pattern_boyermoore.o match_pattern_indels.o match_pattern_shiftor.o match_pdict.o match_pdict_ACtree2.o match_pdict_Twobit.o match_pdict_utils.o match_reporting.o matchprobes.o pmatchPattern.o read_fasta_files.o read_fastq_files.o replaceAt.o replace_letter_at.o strutils.o translate.o unstrsplit_methods.o utils.o xscat.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-bioc-biostrings/usr/lib/R/site-library/00LOCK-r-bioc-biostrings-2.56.0/00new/Biostrings/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for 'twoWayAlphabetFrequencyByQuality' with signature '"QualityScaledXStringSet"': no definition for class "QualityScaledXStringSet"
Creating a new generic function for 'strsplit' in package 'Biostrings'
Creating a generic function for 'ls' from package 'base' in package 'Biostrings'
Creating a new generic function for 'offset' in package 'Biostrings'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Biostrings)
W: Ignoring specified R dependency: R (>= 3.5.0)
I: Using r-bioc-biocgenerics for Depends:BiocGenerics (>= 0.31.5)
I: Using r-bioc-s4vectors for Depends:S4Vectors (>= 0.25.14)
I: Using r-bioc-iranges for Depends:IRanges (>= 2.21.6)
I: Using r-bioc-xvector for Depends:XVector (>= 0.27.2)
I: Using r-cran-runit for Recommends:runit
I: Using r-bioc-bsgenome for Suggests:BSgenome (>= 1.13.14)
W: Cannot find a debian package for Suggests:BSgenome.Celegans.UCSC.ce2 (>= 1.3.11)
W: Cannot find a debian package for Suggests:BSgenome.Dmelanogaster.UCSC.dm3 (>= 1.3.11)
W: Cannot find a debian package for Suggests:BSgenome.Hsapiens.UCSC.hg18
W: Cannot find a debian package for Suggests:drosophila2probe
W: Cannot find a debian package for Suggests:hgu95av2probe
W: Cannot find a debian package for Suggests:hgu133aprobe
I: Using r-bioc-genomicfeatures for Suggests:GenomicFeatures (>= 1.3.14)
W: Cannot find a debian package for Suggests:hgu95av2cdf
I: Using r-bioc-affy for Suggests:affy (>= 1.41.3)
W: Cannot find a debian package for Suggests:affydata (>= 1.11.5)
I: Using r-cran-crayon for Imports:crayon
I: Using r-bioc-s4vectors for LinkingTo:S4Vectors
I: Using r-bioc-iranges for LinkingTo:IRanges
I: Using r-bioc-xvector for LinkingTo:XVector
I: BioConductor API version: r-api-bioc-3.11
   dh_installdocs -a -O--buildsystem=R
   dh_installchangelogs -a -O--buildsystem=R
   dh_installinit -a -O--buildsystem=R
   dh_installsystemduser -a -O--buildsystem=R
   dh_perl -a -O--buildsystem=R
   dh_link -a -O--buildsystem=R
   dh_strip_nondeterminism -a -O--buildsystem=R
   dh_compress -a -O--buildsystem=R
   dh_fixperms -a -O--buildsystem=R
   dh_missing -a -O--buildsystem=R
   dh_dwz -a -O--buildsystem=R
   dh_strip -a -O--buildsystem=R
   dh_makeshlibs -a -O--buildsystem=R
   dh_shlibdeps -a -O--buildsystem=R
   dh_installdeb -a -O--buildsystem=R
   dh_gencontrol -a -O--buildsystem=R
   dh_md5sums -a -O--buildsystem=R
   dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-bioc-biostrings-dbgsym' in '../r-bioc-biostrings-dbgsym_2.56.0-1_armhf.deb'.
dpkg-deb: building package 'r-bioc-biostrings' in '../r-bioc-biostrings_2.56.0-1_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../r-bioc-biostrings_2.56.0-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-05-30T14:18:19Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


r-bioc-biostrings_2.56.0-1_armhf.changes:
-----------------------------------------

Format: 1.8
Date: Mon, 18 May 2020 08:21:02 +0200
Source: r-bioc-biostrings
Binary: r-bioc-biostrings r-bioc-biostrings-dbgsym
Architecture: armhf
Version: 2.56.0-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Dylan Aïssi <daissi@debian.org>
Description:
 r-bioc-biostrings - GNU R string objects representing biological sequences
Changes:
 r-bioc-biostrings (2.56.0-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream version
   * Standards-Version: 4.5.0 (routine-update)
   * Testsuite: autopkgtest-pkg-r (routine-update)
   * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update)
   * Add salsa-ci file (routine-update)
   * Rules-Requires-Root: no (routine-update)
Checksums-Sha1:
 55b4da15aaedf8ef56aac0e3f015fb777131c006 227496 r-bioc-biostrings-dbgsym_2.56.0-1_armhf.deb
 64a23a01437ea31cc913b626cb141285198ee2db 7983 r-bioc-biostrings_2.56.0-1_armhf.buildinfo
 3fdaaa7e03e5947130c77bf8bd06be903c14e94a 14241312 r-bioc-biostrings_2.56.0-1_armhf.deb
Checksums-Sha256:
 4dea47d97b7e4eee9fab0ac745d903d4d1906fbec24ab652474e1cb1c377d57c 227496 r-bioc-biostrings-dbgsym_2.56.0-1_armhf.deb
 265a8b5f81902435a6c49523abec2edbf87a507f3bf25d33931b605d0fa7f311 7983 r-bioc-biostrings_2.56.0-1_armhf.buildinfo
 27c466a2d943eb21e70633f8d091067690849e2e3c311b2537c3e4cb88bfaff0 14241312 r-bioc-biostrings_2.56.0-1_armhf.deb
Files:
 d12becbd6d6f55be102cdfefbf517fe0 227496 debug optional r-bioc-biostrings-dbgsym_2.56.0-1_armhf.deb
 ad7a4eedd6f9f0b5801b93ca93fab231 7983 gnu-r optional r-bioc-biostrings_2.56.0-1_armhf.buildinfo
 8a10aed2839f732f003b8b5d53cd7365 14241312 gnu-r optional r-bioc-biostrings_2.56.0-1_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


r-bioc-biostrings-dbgsym_2.56.0-1_armhf.deb
-------------------------------------------

 new Debian package, version 2.0.
 size 227496 bytes: control archive=544 bytes.
     406 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: r-bioc-biostrings-dbgsym
 Source: r-bioc-biostrings
 Version: 2.56.0-1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
 Installed-Size: 267
 Depends: r-bioc-biostrings (= 2.56.0-1)
 Section: debug
 Priority: optional
 Description: debug symbols for r-bioc-biostrings
 Build-Ids: 0f2e1ee9f0da3dd1a3a9a716d8e1e3a7ad2cd934

drwxr-xr-x root/root         0 2020-05-18 06:21 ./
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/debug/.build-id/0f/
-rw-r--r-- root/root    262296 2020-05-18 06:21 ./usr/lib/debug/.build-id/0f/2e1ee9f0da3dd1a3a9a716d8e1e3a7ad2cd934.debug
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/share/
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-05-18 06:21 ./usr/share/doc/r-bioc-biostrings-dbgsym -> r-bioc-biostrings


r-bioc-biostrings_2.56.0-1_armhf.deb
------------------------------------

 new Debian package, version 2.0.
 size 14241312 bytes: control archive=3000 bytes.
     823 bytes,    15 lines      control              
    7165 bytes,    81 lines      md5sums              
 Package: r-bioc-biostrings
 Version: 2.56.0-1
 Architecture: armhf
 Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
 Installed-Size: 15315
 Depends: r-base-core (>= 4.0.0-3), r-api-4.0, r-api-bioc-3.11, r-bioc-biocgenerics (>= 0.31.5), r-bioc-s4vectors (>= 0.25.14), r-bioc-iranges (>= 2.21.6), r-bioc-xvector (>= 0.27.2), r-cran-crayon, libc6 (>= 2.7)
 Recommends: r-cran-runit
 Suggests: r-bioc-bsgenome (>= 1.13.14), r-bioc-genomicfeatures (>= 1.3.14), r-bioc-affy (>= 1.41.3)
 Section: gnu-r
 Priority: optional
 Homepage: https://bioconductor.org/packages/Biostrings/
 Description: GNU R string objects representing biological sequences
  Memory efficient string containers, string matching algorithms, and other
  utilities, for fast manipulation of large biological sequences or set of
  sequences.

drwxr-xr-x root/root         0 2020-05-18 06:21 ./
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/
-rw-r--r-- root/root      2556 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/DESCRIPTION
-rw-r--r-- root/root      5182 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/INDEX
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/Meta/
-rw-r--r-- root/root      7788 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/Meta/Rd.rds
-rw-r--r-- root/root       335 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/Meta/data.rds
-rw-r--r-- root/root       130 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/Meta/features.rds
-rw-r--r-- root/root      8100 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/Meta/hsearch.rds
-rw-r--r-- root/root      6423 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/Meta/links.rds
-rw-r--r-- root/root      2467 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/Meta/nsInfo.rds
-rw-r--r-- root/root      1972 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/Meta/package.rds
-rw-r--r-- root/root       453 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/Meta/vignette.rds
-rw-r--r-- root/root     11177 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/NAMESPACE
-rw-r--r-- root/root     17344 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/NEWS
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/R/
-rw-r--r-- root/root      1056 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/R/Biostrings
-rw-r--r-- root/root   1866318 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/R/Biostrings.rdb
-rw-r--r-- root/root     16730 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/R/Biostrings.rdx
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/
-rw-r--r-- root/root       712 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/BLOSUM100.rda
-rw-r--r-- root/root       635 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/BLOSUM45.rda
-rw-r--r-- root/root       628 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/BLOSUM50.rda
-rw-r--r-- root/root       620 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/BLOSUM62.rda
-rw-r--r-- root/root       648 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/BLOSUM80.rda
-rw-r--r-- root/root      4533 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/HNF4alpha.rda
-rw-r--r-- root/root       673 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/PAM120.rda
-rw-r--r-- root/root       635 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/PAM250.rda
-rw-r--r-- root/root       767 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/PAM30.rda
-rw-r--r-- root/root       736 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/PAM40.rda
-rw-r--r-- root/root       740 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/PAM70.rda
-rw-r--r-- root/root      6445 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/phiX174Phage.rda
-rw-r--r-- root/root     37751 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/srPhiX174.rda
-rw-r--r-- root/root     66419 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/data/yeastSEQCHR1.rda
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/
-rw-r--r-- root/root      3614 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/Biostrings2Classes.R
-rw-r--r-- root/root      8514 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/Biostrings2Classes.Rnw
-rw-r--r-- root/root    161957 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/Biostrings2Classes.pdf
-rw-r--r-- root/root      9790 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/BiostringsQuickOverview.Rnw
-rw-r--r-- root/root    112010 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/BiostringsQuickOverview.pdf
-rw-r--r-- root/root      5239 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/MultipleAlignments.R
-rw-r--r-- root/root     10512 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/MultipleAlignments.Rnw
-rw-r--r-- root/root    157200 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/MultipleAlignments.pdf
-rw-r--r-- root/root     25135 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/PairwiseAlignments.R
-rw-r--r-- root/root     53393 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/PairwiseAlignments.Rnw
-rw-r--r-- root/root    288362 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/PairwiseAlignments.pdf
-rw-r--r-- root/root      3527 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/index.html
-rw-r--r-- root/root      3664 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/matchprobes.R
-rw-r--r-- root/root      9923 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/matchprobes.Rnw
-rw-r--r-- root/root    245674 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/doc/matchprobes.pdf
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/
-rw-r--r-- root/root      6313 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/Phylip.txt
-rw-r--r-- root/root       440 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/README
-rw-r--r-- root/root      1633 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/Sc.fa
-rw-r--r-- root/root      1653 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/Sp.fa
-rw-r--r-- root/root  11525633 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/dm3_upstream2000.fa.gz
-rw-r--r-- root/root       169 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/fastaEx.fa
-rw-r--r-- root/root       495 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/hg18chr8_gap.txt
-rw-r--r-- root/root       667 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/hg18chrY_gap.txt
-rw-r--r-- root/root     37906 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/msx2_mRNA.aln
-rw-r--r-- root/root     31740 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/s_1_sequence.txt
-rw-r--r-- root/root     27326 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/someORF.fa
-rw-r--r-- root/root      8082 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/extdata/someORF.fa.gz
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/help/
-rw-r--r-- root/root     41227 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/help/AnIndex
-rw-r--r-- root/root    405040 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/help/Biostrings.rdb
-rw-r--r-- root/root      1703 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/help/Biostrings.rdx
-rw-r--r-- root/root      6698 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/help/aliases.rds
-rw-r--r-- root/root       811 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/help/paths.rds
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/html/
-rw-r--r-- root/root     89106 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/html/00Index.html
-rw-r--r-- root/root      1335 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/html/R.css
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/include/
-rw-r--r-- root/root      6264 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/include/Biostrings_defines.h
-rw-r--r-- root/root      6554 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/include/Biostrings_interface.h
-rw-r--r-- root/root      4006 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/include/_Biostrings_stubs.c
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/libs/
-rw-r--r-- root/root    182816 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/libs/Biostrings.so
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/unitTests/
-rw-r--r-- root/root     10984 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/unitTests/test_MultipleAlignment.R
-rw-r--r-- root/root      1929 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/unitTests/test_XString.R
-rw-r--r-- root/root      3929 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/unitTests/test_XStringSet.R
-rw-r--r-- root/root      4434 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/unitTests/test_XStringSetList.R
-rw-r--r-- root/root      5945 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/unitTests/test_findPalindromes.R
-rw-r--r-- root/root      8250 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/unitTests/test_matchDNAPattern.R.FIXME
-rw-r--r-- root/root      4411 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/unitTests/test_matchPDict.R
-rw-r--r-- root/root     10331 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/unitTests/test_pairwiseAlignment.R
-rw-r--r-- root/root      5381 2020-05-18 06:21 ./usr/lib/R/site-library/Biostrings/unitTests/test_twoWayAlphabetFrequency.R
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/share/
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-05-18 06:21 ./usr/share/doc/r-bioc-biostrings/
-rw-r--r-- root/root       262 2020-05-18 06:21 ./usr/share/doc/r-bioc-biostrings/README.test
-rw-r--r-- root/root      1312 2020-05-18 06:21 ./usr/share/doc/r-bioc-biostrings/changelog.Debian.gz
-rw-r--r-- root/root      1989 2020-04-27 20:17 ./usr/share/doc/r-bioc-biostrings/changelog.gz
-rw-r--r-- root/root      5306 2020-05-18 06:21 ./usr/share/doc/r-bioc-biostrings/copyright
-rw-r--r-- root/root       340 2020-05-18 06:21 ./usr/share/doc/r-bioc-biostrings/run-unit-test


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 44548
Build-Time: 438
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 972
Job: r-bioc-biostrings_2.56.0-1
Machine Architecture: armhf
Package: r-bioc-biostrings
Package-Time: 1465
Source-Version: 2.56.0-1
Space: 44548
Status: successful
Version: 2.56.0-1
--------------------------------------------------------------------------------
Finished at 2020-05-30T14:18:19Z
Build needed 00:24:25, 44548k disc space