r-bioc-biostrings →
2.32.0-1 →
armhf → 2014-06-19 06:03:56
sbuild (Debian sbuild) 0.63.2 (18 Aug 2012) on testbuildd.raspbian.org
╔══════════════════════════════════════════════════════════════════════════════╗
║ r-bioc-biostrings 2.32.0-1 (armhf) 19 Jun 2014 05:53 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-biostrings
Version: 2.32.0-1
Source Version: 2.32.0-1
Distribution: jessie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/r-bioc-biostrings-VcWIv3/r-bioc-biostrings-2.32.0' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/r-bioc-biostrings-VcWIv3' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/jessie-staging-armhf-sbuild-27a639e4-418a-479a-8f30-49f13c36a170' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
Get:1 http://172.17.0.1 jessie-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1 jessie-staging/main Sources [7328 kB]
Get:3 http://172.17.0.1 jessie-staging/main armhf Packages [8243 kB]
Ign http://172.17.0.1 jessie-staging/main Translation-en
Fetched 15.6 MB in 31s (502 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files │
└──────────────────────────────────────────────────────────────────────────────┘
Check APT
─────────
Checking available source versions...
Download source files with APT
──────────────────────────────
Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-biostrings' packaging is maintained in the 'Svn' version control system at:
svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-biostrings/trunk/
Need to get 1509 kB of source archives.
Get:1 http://172.17.0.1/private/ jessie-staging/main r-bioc-biostrings 2.32.0-1 (dsc) [2153 B]
Get:2 http://172.17.0.1/private/ jessie-staging/main r-bioc-biostrings 2.32.0-1 (tar) [1503 kB]
Get:3 http://172.17.0.1/private/ jessie-staging/main r-bioc-biostrings 2.32.0-1 (diff) [4004 B]
Fetched 1509 kB in 0s (1554 kB/s)
Download complete and in download only mode
Check arch
──────────
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-1ARoRp/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 62 not upgraded.
Need to get 0 B/814 B of archives.
After this operation, 0 B of additional disk space will be used.
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12374 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev, r-bioc-xvector (>= 0.4.0)
Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev, r-bioc-xvector (>= 0.4.0)
dpkg-deb: building package `sbuild-build-depends-r-bioc-biostrings-dummy' in `/«BUILDDIR»/resolver-OsFdPq/apt_archive/sbuild-build-depends-r-bioc-biostrings-dummy.deb'.
OK
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install r-bioc-biostrings build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils cdbs cpp cpp-4.9 debhelper file fontconfig fontconfig-config
fonts-dejavu-core gcc gcc-4.9 gcc-4.9-base gettext gettext-base gfortran
gfortran-4.9 groff-base intltool-debian libasan1 libasprintf0c2 libatomic1
libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libdrm2
libexpat1 libffi6 libfontconfig1 libfreetype6 libgcc-4.9-dev libgcc1
libgfortran-4.9-dev libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0
libgomp1 libgraphite2-3 libharfbuzz0b libice6 libjbig0 libjpeg8 libjpeg8-dev
liblapack-dev liblapack3 liblzma-dev libmagic1 libncurses5-dev
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
libpng12-dev libreadline-dev libreadline6-dev libsm6 libstdc++6 libtcl8.5
libthai-data libthai0 libtiff5 libtinfo-dev libtk8.5 libubsan0 libunistring0
libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0
libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb1
libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1
libxshmfence1 libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core
r-base-dev r-bioc-biocgenerics r-bioc-iranges r-bioc-xvector ucf unzip
x11-common xdg-utils zip zlib1g zlib1g-dev
Suggested packages:
wamerican wordlist whois vacation devscripts cpp-doc gcc-4.9-locales dh-make
gcc-multilib manpages-dev autoconf automake1.9 libtool flex bison gdb
gcc-doc gcc-4.9-doc libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg
libasan1-dbg liblsan0-dbg libtsan0-dbg libubsan0-dbg libvtv0-dbg
libcilkrts5-dbg libquadmath-dbg gettext-doc gfortran-doc gfortran-4.9-doc
libgfortran3-dbg groff liblzma-doc ncurses-doc ttf-baekmuk
ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
ttf-arphic-bkai00mp tcl8.5 tk8.5 less www-browser libmail-box-perl
r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
gvfs-bin
Recommended packages:
autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
libgl1-mesa-dri libglib2.0-data shared-mime-info xml-core
libmail-sendmail-perl r-recommended r-doc-html libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs cpp-4.9 debhelper file fontconfig fontconfig-config
fonts-dejavu-core gcc-4.9 gettext gettext-base gfortran gfortran-4.9
groff-base intltool-debian libasan1 libasprintf0c2 libblas-dev libblas3
libbz2-dev libcairo2 libcroco3 libdatrie1 libdrm2 libexpat1 libffi6
libfontconfig1 libfreetype6 libgcc-4.9-dev libgfortran-4.9-dev libgfortran3
libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgraphite2-3 libharfbuzz0b
libice6 libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3 liblzma-dev
libmagic1 libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0
libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
libreadline6-dev libsm6 libtcl8.5 libthai-data libthai0 libtiff5
libtinfo-dev libtk8.5 libubsan0 libunistring0 libx11-6 libx11-data
libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0
libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb1 libxdamage1 libxdmcp6
libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxshmfence1 libxss1 libxt6
libxxf86vm1 man-db po-debconf r-base-core r-base-dev r-bioc-biocgenerics
r-bioc-iranges r-bioc-xvector sbuild-build-depends-r-bioc-biostrings-dummy
ucf unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
cpp gcc gcc-4.9-base libatomic1 libgcc1 libgomp1 libstdc++6 zlib1g
8 upgraded, 104 newly installed, 0 to remove and 54 not upgraded.
Need to get 62.1 MB/62.1 MB of archives.
After this operation, 148 MB of additional disk space will be used.
Get:1 http://172.17.0.1/private/ jessie-staging/main libgomp1 armhf 4.9.0-6 [33.3 kB]
Get:2 http://172.17.0.1/private/ jessie-staging/main gcc-4.9-base armhf 4.9.0-6 [156 kB]
Get:3 http://172.17.0.1/private/ jessie-staging/main libstdc++6 armhf 4.9.0-6 [234 kB]
Get:4 http://172.17.0.1/private/ jessie-staging/main libatomic1 armhf 4.9.0-6 [6152 B]
Get:5 http://172.17.0.1/private/ jessie-staging/main libgcc1 armhf 1:4.9.0-6 [39.5 kB]
Get:6 http://172.17.0.1/private/ jessie-staging/main zlib1g armhf 1:1.2.8.dfsg-1+rpi1 [77.7 kB]
Get:7 http://172.17.0.1/private/ jessie-staging/main libpipeline1 armhf 1.3.0-1 [21.1 kB]
Get:8 http://172.17.0.1/private/ jessie-staging/main groff-base armhf 1.22.2-5 [962 kB]
Get:9 http://172.17.0.1/private/ jessie-staging/main bsdmainutils armhf 9.0.5 [206 kB]
Get:10 http://172.17.0.1/private/ jessie-staging/main man-db armhf 2.6.7.1-1 [964 kB]
Get:11 http://172.17.0.1/private/ jessie-staging/main libasprintf0c2 armhf 0.18.3.2-2 [29.2 kB]
Get:12 http://172.17.0.1/private/ jessie-staging/main libmagic1 armhf 1:5.18-1 [229 kB]
Get:13 http://172.17.0.1/private/ jessie-staging/main libxml2 armhf 2.9.1+dfsg1-3 [836 kB]
Get:14 http://172.17.0.1/private/ jessie-staging/main libasan1 armhf 4.9.0-6 [165 kB]
Get:15 http://172.17.0.1/private/ jessie-staging/main libexpat1 armhf 2.1.0-6 [60.2 kB]
Get:16 http://172.17.0.1/private/ jessie-staging/main libpng12-0 armhf 1.2.50-1 [180 kB]
Get:17 http://172.17.0.1/private/ jessie-staging/main libfreetype6 armhf 2.5.2-1 [397 kB]
Get:18 http://172.17.0.1/private/ jessie-staging/main ucf all 3.0030 [69.7 kB]
Get:19 http://172.17.0.1/private/ jessie-staging/main fonts-dejavu-core all 2.34-1 [1047 kB]
Get:20 http://172.17.0.1/private/ jessie-staging/main fontconfig-config all 2.11.0-5 [273 kB]
Get:21 http://172.17.0.1/private/ jessie-staging/main libfontconfig1 armhf 2.11.0-5 [310 kB]
Get:22 http://172.17.0.1/private/ jessie-staging/main libdrm2 armhf 2.4.54-1 [25.9 kB]
Get:23 http://172.17.0.1/private/ jessie-staging/main libglapi-mesa armhf 10.1.4-1 [64.2 kB]
Get:24 http://172.17.0.1/private/ jessie-staging/main libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:25 http://172.17.0.1/private/ jessie-staging/main libxdmcp6 armhf 1:1.1.1-1 [24.6 kB]
Get:26 http://172.17.0.1/private/ jessie-staging/main libxcb1 armhf 1.10-3 [38.1 kB]
Get:27 http://172.17.0.1/private/ jessie-staging/main libx11-data all 2:1.6.2-2 [126 kB]
Get:28 http://172.17.0.1/private/ jessie-staging/main libx11-6 armhf 2:1.6.2-2 [657 kB]
Get:29 http://172.17.0.1/private/ jessie-staging/main libx11-xcb1 armhf 2:1.6.2-2 [163 kB]
Get:30 http://172.17.0.1/private/ jessie-staging/main libxcb-dri2-0 armhf 1.10-3 [12.1 kB]
Get:31 http://172.17.0.1/private/ jessie-staging/main libxcb-dri3-0 armhf 1.10-3 [10.6 kB]
Get:32 http://172.17.0.1/private/ jessie-staging/main libxcb-glx0 armhf 1.10-3 [23.8 kB]
Get:33 http://172.17.0.1/private/ jessie-staging/main libxcb-present0 armhf 1.10-3 [10.8 kB]
Get:34 http://172.17.0.1/private/ jessie-staging/main libxcb-sync1 armhf 1.10-3 [13.2 kB]
Get:35 http://172.17.0.1/private/ jessie-staging/main libxfixes3 armhf 1:5.0.1-1 [21.0 kB]
Get:36 http://172.17.0.1/private/ jessie-staging/main libxdamage1 armhf 1:1.1.4-1 [14.6 kB]
Get:37 http://172.17.0.1/private/ jessie-staging/main libxext6 armhf 2:1.3.2-1 [51.1 kB]
Get:38 http://172.17.0.1/private/ jessie-staging/main libxshmfence1 armhf 1.1-2 [6736 B]
Get:39 http://172.17.0.1/private/ jessie-staging/main libxxf86vm1 armhf 1:1.1.3-1 [20.0 kB]
Get:40 http://172.17.0.1/private/ jessie-staging/main libgl1-mesa-glx armhf 10.1.4-1 [134 kB]
Get:41 http://172.17.0.1/private/ jessie-staging/main libpixman-1-0 armhf 0.32.4-1 [476 kB]
Get:42 http://172.17.0.1/private/ jessie-staging/main libxcb-render0 armhf 1.10-3 [16.0 kB]
Get:43 http://172.17.0.1/private/ jessie-staging/main libxcb-shm0 armhf 1.10-3 [11.0 kB]
Get:44 http://172.17.0.1/private/ jessie-staging/main libxrender1 armhf 1:0.9.8-1 [30.4 kB]
Get:45 http://172.17.0.1/private/ jessie-staging/main libcairo2 armhf 1.12.16-2+rpi1 [894 kB]
Get:46 http://172.17.0.1/private/ jessie-staging/main libffi6 armhf 3.1-2 [18.1 kB]
Get:47 http://172.17.0.1/private/ jessie-staging/main libglib2.0-0 armhf 2.40.0-3 [2247 kB]
Get:48 http://172.17.0.1/private/ jessie-staging/main libcroco3 armhf 0.6.8-2 [119 kB]
Get:49 http://172.17.0.1/private/ jessie-staging/main libdatrie1 armhf 0.2.8-1 [29.1 kB]
Get:50 http://172.17.0.1/private/ jessie-staging/main libgfortran3 armhf 4.9.0-6 [154 kB]
Get:51 http://172.17.0.1/private/ jessie-staging/main libgraphite2-3 armhf 1.2.4-3 [48.2 kB]
Get:52 http://172.17.0.1/private/ jessie-staging/main libharfbuzz0b armhf 0.9.28-2 [434 kB]
Get:53 http://172.17.0.1/private/ jessie-staging/main x11-common all 1:7.7+7 [287 kB]
Get:54 http://172.17.0.1/private/ jessie-staging/main libice6 armhf 2:1.0.8-2 [56.2 kB]
Get:55 http://172.17.0.1/private/ jessie-staging/main libjpeg8 armhf 8d-2 [133 kB]
Get:56 http://172.17.0.1/private/ jessie-staging/main libthai-data all 0.1.20-3 [157 kB]
Get:57 http://172.17.0.1/private/ jessie-staging/main libthai0 armhf 0.1.20-3 [41.6 kB]
Get:58 http://172.17.0.1/private/ jessie-staging/main fontconfig armhf 2.11.0-5 [401 kB]
Get:59 http://172.17.0.1/private/ jessie-staging/main libpango-1.0-0 armhf 1.36.3-1 [265 kB]
Get:60 http://172.17.0.1/private/ jessie-staging/main libpangoft2-1.0-0 armhf 1.36.3-1 [199 kB]
Get:61 http://172.17.0.1/private/ jessie-staging/main libpangocairo-1.0-0 armhf 1.36.3-1 [189 kB]
Get:62 http://172.17.0.1/private/ jessie-staging/main libpaper1 armhf 1.1.24+nmu3 [20.7 kB]
Get:63 http://172.17.0.1/private/ jessie-staging/main libpcrecpp0 armhf 1:8.31-5 [124 kB]
Get:64 http://172.17.0.1/private/ jessie-staging/main libsm6 armhf 2:1.2.1-2 [32.5 kB]
Get:65 http://172.17.0.1/private/ jessie-staging/main libtcl8.5 armhf 8.5.15-4 [649 kB]
Get:66 http://172.17.0.1/private/ jessie-staging/main libjbig0 armhf 2.0-2.1 [26.8 kB]
Get:67 http://172.17.0.1/private/ jessie-staging/main libtiff5 armhf 4.0.3-8 [192 kB]
Get:68 http://172.17.0.1/private/ jessie-staging/main libxft2 armhf 2.3.1-2 [47.7 kB]
Get:69 http://172.17.0.1/private/ jessie-staging/main libxss1 armhf 1:1.2.2-1 [16.8 kB]
Get:70 http://172.17.0.1/private/ jessie-staging/main libtk8.5 armhf 8.5.15-4 [646 kB]
Get:71 http://172.17.0.1/private/ jessie-staging/main libubsan0 armhf 4.9.0-6 [68.2 kB]
Get:72 http://172.17.0.1/private/ jessie-staging/main libunistring0 armhf 0.9.3-5 [408 kB]
Get:73 http://172.17.0.1/private/ jessie-staging/main libxt6 armhf 1:1.1.4-1 [183 kB]
Get:74 http://172.17.0.1/private/ jessie-staging/main file armhf 1:5.18-1 [57.2 kB]
Get:75 http://172.17.0.1/private/ jessie-staging/main gettext-base armhf 0.18.3.2-2 [112 kB]
Get:76 http://172.17.0.1/private/ jessie-staging/main cdbs all 0.4.123 [75.1 kB]
Get:77 http://172.17.0.1/private/ jessie-staging/main cpp-4.9 armhf 4.9.0-6 [4255 kB]
Get:78 http://172.17.0.1/private/ jessie-staging/main cpp armhf 4:4.9.0-3 [16.9 kB]
Get:79 http://172.17.0.1/private/ jessie-staging/main gettext armhf 0.18.3.2-2 [1136 kB]
Get:80 http://172.17.0.1/private/ jessie-staging/main intltool-debian all 0.35.0+20060710.1 [29.8 kB]
Get:81 http://172.17.0.1/private/ jessie-staging/main po-debconf all 1.0.16+nmu2 [223 kB]
Get:82 http://172.17.0.1/private/ jessie-staging/main debhelper all 9.20140613 [692 kB]
Get:83 http://172.17.0.1/private/ jessie-staging/main libgcc-4.9-dev armhf 4.9.0-6 [348 kB]
Get:84 http://172.17.0.1/private/ jessie-staging/main gcc-4.9 armhf 4.9.0-6 [4406 kB]
Get:85 http://172.17.0.1/private/ jessie-staging/main gcc armhf 4:4.9.0-3 [5070 B]
Get:86 http://172.17.0.1/private/ jessie-staging/main libgfortran-4.9-dev armhf 4.9.0-6 [181 kB]
Get:87 http://172.17.0.1/private/ jessie-staging/main gfortran-4.9 armhf 4.9.0-6 [4480 kB]
Get:88 http://172.17.0.1/private/ jessie-staging/main gfortran armhf 4:4.9.0-3 [1264 B]
Get:89 http://172.17.0.1/private/ jessie-staging/main libblas3 armhf 1.2.20110419-7 [186 kB]
Get:90 http://172.17.0.1/private/ jessie-staging/main libblas-dev armhf 1.2.20110419-7 [201 kB]
Get:91 http://172.17.0.1/private/ jessie-staging/main libbz2-dev armhf 1.0.6-5 [33.8 kB]
Get:92 http://172.17.0.1/private/ jessie-staging/main libjpeg8-dev armhf 8d-2 [238 kB]
Get:93 http://172.17.0.1/private/ jessie-staging/main liblapack3 armhf 3.5.0-2 [2416 kB]
Get:94 http://172.17.0.1/private/ jessie-staging/main liblapack-dev armhf 3.5.0-2 [2716 kB]
Get:95 http://172.17.0.1/private/ jessie-staging/main liblzma-dev armhf 5.1.1alpha+20120614-2 [272 kB]
Get:96 http://172.17.0.1/private/ jessie-staging/main libtinfo-dev armhf 5.9+20140118-1 [64.8 kB]
Get:97 http://172.17.0.1/private/ jessie-staging/main libncurses5-dev armhf 5.9+20140118-1 [152 kB]
Get:98 http://172.17.0.1/private/ jessie-staging/main libpaper-utils armhf 1.1.24+nmu3 [17.0 kB]
Get:99 http://172.17.0.1/private/ jessie-staging/main libpcre3-dev armhf 1:8.31-5 [357 kB]
Get:100 http://172.17.0.1/private/ jessie-staging/main zlib1g-dev armhf 1:1.2.8.dfsg-1+rpi1 [192 kB]
Get:101 http://172.17.0.1/private/ jessie-staging/main libpng12-dev armhf 1.2.50-1 [260 kB]
Get:102 http://172.17.0.1/private/ jessie-staging/main libreadline6-dev armhf 6.3-6 [194 kB]
Get:103 http://172.17.0.1/private/ jessie-staging/main libreadline-dev armhf 6.3-6 [994 B]
Get:104 http://172.17.0.1/private/ jessie-staging/main zip armhf 3.0-8 [326 kB]
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Get:106 http://172.17.0.1/private/ jessie-staging/main xdg-utils all 1.1.0~rc1+git20111210-7.1 [64.6 kB]
Get:107 http://172.17.0.1/private/ jessie-staging/main r-base-core armhf 3.1.0-1 [19.4 MB]
Get:108 http://172.17.0.1/private/ jessie-staging/main r-base-dev all 3.1.0-1 [4014 B]
Get:109 http://172.17.0.1/private/ jessie-staging/main r-bioc-biocgenerics all 0.10.0-1 [397 kB]
Get:110 http://172.17.0.1/private/ jessie-staging/main r-bioc-iranges armhf 1.22.8-1 [1807 kB]
Get:111 http://172.17.0.1/private/ jessie-staging/main r-bioc-xvector armhf 0.4.0-1 [328 kB]
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update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up man-db (2.6.7.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libasprintf0c2:armhf (0.18.3.2-2) ...
Setting up libmagic1:armhf (1:5.18-1) ...
Setting up libxml2:armhf (2.9.1+dfsg1-3) ...
Setting up libasan1:armhf (4.9.0-6) ...
Setting up libexpat1:armhf (2.1.0-6) ...
Setting up libpng12-0:armhf (1.2.50-1) ...
Setting up libfreetype6:armhf (2.5.2-1) ...
Setting up ucf (3.0030) ...
Setting up fonts-dejavu-core (2.34-1) ...
Setting up fontconfig-config (2.11.0-5) ...
Setting up libfontconfig1:armhf (2.11.0-5) ...
Setting up libdrm2:armhf (2.4.54-1) ...
Setting up libglapi-mesa:armhf (10.1.4-1) ...
Setting up libxau6:armhf (1:1.0.8-1) ...
Setting up libxdmcp6:armhf (1:1.1.1-1) ...
Setting up libxcb1:armhf (1.10-3) ...
Setting up libx11-data (2:1.6.2-2) ...
Setting up libx11-6:armhf (2:1.6.2-2) ...
Setting up libx11-xcb1:armhf (2:1.6.2-2) ...
Setting up libxcb-dri2-0:armhf (1.10-3) ...
Setting up libxcb-dri3-0:armhf (1.10-3) ...
Setting up libxcb-glx0:armhf (1.10-3) ...
Setting up libxcb-present0:armhf (1.10-3) ...
Setting up libxcb-sync1:armhf (1.10-3) ...
Setting up libxfixes3:armhf (1:5.0.1-1) ...
Setting up libxdamage1:armhf (1:1.1.4-1) ...
Setting up libxext6:armhf (2:1.3.2-1) ...
Setting up libxshmfence1:armhf (1.1-2) ...
Setting up libxxf86vm1:armhf (1:1.1.3-1) ...
Setting up libgl1-mesa-glx:armhf (10.1.4-1) ...
Setting up libpixman-1-0:armhf (0.32.4-1) ...
Setting up libxcb-render0:armhf (1.10-3) ...
Setting up libxcb-shm0:armhf (1.10-3) ...
Setting up libxrender1:armhf (1:0.9.8-1) ...
Setting up libcairo2:armhf (1.12.16-2+rpi1) ...
Setting up libffi6:armhf (3.1-2) ...
Setting up libglib2.0-0:armhf (2.40.0-3) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.8-2) ...
Setting up libdatrie1:armhf (0.2.8-1) ...
Setting up libgfortran3:armhf (4.9.0-6) ...
Setting up libgraphite2-3:armhf (1.2.4-3) ...
Setting up libharfbuzz0b:armhf (0.9.28-2) ...
Setting up x11-common (1:7.7+7) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libice6:armhf (2:1.0.8-2) ...
Setting up libjpeg8:armhf (8d-2) ...
Setting up libthai-data (0.1.20-3) ...
Setting up libthai0:armhf (0.1.20-3) ...
Setting up fontconfig (2.11.0-5) ...
Regenerating fonts cache... done.
Setting up libpango-1.0-0:armhf (1.36.3-1) ...
Setting up libpangoft2-1.0-0:armhf (1.36.3-1) ...
Setting up libpangocairo-1.0-0:armhf (1.36.3-1) ...
Setting up libpaper1:armhf (1.1.24+nmu3) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:armhf (1:8.31-5) ...
Setting up libsm6:armhf (2:1.2.1-2) ...
Setting up libtcl8.5:armhf (8.5.15-4) ...
Setting up libjbig0:armhf (2.0-2.1) ...
Setting up libtiff5:armhf (4.0.3-8) ...
Setting up libxft2:armhf (2.3.1-2) ...
Setting up libxss1:armhf (1:1.2.2-1) ...
Setting up libtk8.5:armhf (8.5.15-4) ...
Setting up libubsan0:armhf (4.9.0-6) ...
Setting up libunistring0:armhf (0.9.3-5) ...
Setting up libxt6:armhf (1:1.1.4-1) ...
Setting up file (1:5.18-1) ...
Setting up gettext-base (0.18.3.2-2) ...
Setting up cdbs (0.4.123) ...
Setting up cpp-4.9 (4.9.0-6) ...
Setting up cpp (4:4.9.0-3) ...
Setting up gettext (0.18.3.2-2) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
Setting up debhelper (9.20140613) ...
Setting up libgcc-4.9-dev:armhf (4.9.0-6) ...
Setting up gcc-4.9 (4.9.0-6) ...
Setting up gcc (4:4.9.0-3) ...
Setting up libgfortran-4.9-dev:armhf (4.9.0-6) ...
Setting up gfortran-4.9 (4.9.0-6) ...
Setting up gfortran (4:4.9.0-3) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-7) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
Setting up libblas-dev (1.2.20110419-7) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libbz2-dev:armhf (1.0.6-5) ...
Setting up libjpeg8-dev:armhf (8d-2) ...
Setting up liblapack3 (3.5.0-2) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.5.0-2) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up liblzma-dev:armhf (5.1.1alpha+20120614-2) ...
Setting up libtinfo-dev:armhf (5.9+20140118-1) ...
Setting up libncurses5-dev:armhf (5.9+20140118-1) ...
Setting up libpaper-utils (1.1.24+nmu3) ...
Setting up libpcre3-dev:armhf (1:8.31-5) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-1+rpi1) ...
Setting up libpng12-dev (1.2.50-1) ...
Setting up libreadline6-dev:armhf (6.3-6) ...
Setting up libreadline-dev:armhf (6.3-6) ...
Setting up zip (3.0-8) ...
Setting up unzip (6.0-12) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7.1) ...
Setting up r-base-core (3.1.0-1) ...
Creating config file /etc/R/Renviron with new version
Setting up r-base-dev (3.1.0-1) ...
Setting up r-bioc-biocgenerics (0.10.0-1) ...
Setting up r-bioc-iranges (1.22.8-1) ...
Setting up r-bioc-xvector (0.4.0-1) ...
Setting up sbuild-build-depends-r-bioc-biostrings-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.18-5) ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.14-1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.24.51.20140425-1 dpkg-dev_1.17.6+rpi1 g++-4.6_4.6.4-5+rpi1 g++-4.8_4.8.2-21 gcc-4.6_4.6.4-5+rpi1 gcc-4.8_4.8.2-21 gcc-4.9_4.9.0-6 libc6-dev_2.18-5 libstdc++-4.8-dev_4.8.2-21 libstdc++6_4.9.0-6 libstdc++6-4.6-dev_4.6.4-5+rpi1 linux-libc-dev_3.13.10-1+rpi1
Package versions: apt_1.0.1 base-files_7.2+rpi1 base-passwd_3.5.28 bash_4.3-7 binutils_2.24.51.20140425-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.7 build-essential_11.6 bzip2_1.0.6-5 cdbs_0.4.123 coreutils_8.21-1.2 cpio_2.11+dfsg-2 cpp_4:4.9.0-3 cpp-4.6_4.6.4-5+rpi1 cpp-4.8_4.8.2-21 cpp-4.9_4.9.0-6 dash_0.5.7-4 debconf_1.5.53 debfoster_2.7-1.2 debhelper_9.20140613 debianutils_4.4 diffutils_1:3.3-1 dpkg_1.17.6+rpi1 dpkg-dev_1.17.6+rpi1 e2fslibs_1.42.9-3 e2fsprogs_1.42.9-3 fakeroot_1.18.4-2 file_1:5.18-1 findutils_4.4.2-8 fontconfig_2.11.0-5 fontconfig-config_2.11.0-5 fonts-dejavu-core_2.34-1 g++_4:4.8.2-3 g++-4.6_4.6.4-5+rpi1 g++-4.8_4.8.2-21 gcc_4:4.9.0-3 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.4-5+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8_4.8.2-21 gcc-4.8-base_4.8.2-21 gcc-4.9_4.9.0-6 gcc-4.9-base_4.9.0-6 gettext_0.18.3.2-2 gettext-base_0.18.3.2-2 gfortran_4:4.9.0-3 gfortran-4.9_4.9.0-6 gnupg_1.4.16-1.1 gpgv_1.4.16-1.1 grep_2.18-2 groff-base_1.22.2-5 gzip_1.6-3 hostname_3.15 init-system-helpers_1.18 initramfs-tools_0.115 initscripts_2.88dsf-53 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.1 klibc-utils_2.0.2-1+rpi1 kmod_16-2 libacl1_2.2.52-1 libapt-pkg4.12_1.0.1 libarchive-extract-perl_0.72-1 libasan0_4.8.2-21 libasan1_4.9.0-6 libasprintf0c2_0.18.3.2-2 libatomic1_4.9.0-6 libattr1_1:2.4.47-1 libaudit-common_1:2.3.6-1 libaudit1_1:2.3.6-1 libblas-dev_1.2.20110419-7 libblas3_1.2.20110419-7 libblkid1_2.20.1-5.7 libbz2-1.0_1.0.6-5 libbz2-dev_1.0.6-5 libc-bin_2.18-5 libc-dev-bin_2.18-5 libc6_2.18-5 libc6-dev_2.18-5 libcairo2_1.12.16-2+rpi1 libcap2_1:2.22-1.2 libclass-isa-perl_0.36-5 libcloog-isl4_0.18.2-1 libcomerr2_1.42.9-3 libcroco3_0.6.8-2 libdatrie1_0.2.8-1 libdb5.1_5.1.29-6 libdb5.3_5.3.28-3 libdbus-1-3_1.8.0-3 libdpkg-perl_1.17.6+rpi1 libdrm2_2.4.54-1 libexpat1_2.1.0-6 libffi6_3.1-2 libfontconfig1_2.11.0-5 libfreetype6_2.5.2-1 libgc1c2_1:7.2d-6 libgcc-4.8-dev_4.8.2-21 libgcc-4.9-dev_4.9.0-6 libgcc1_1:4.9.0-6 libgdbm3_1.8.3-12 libgfortran-4.9-dev_4.9.0-6 libgfortran3_4.9.0-6 libgl1-mesa-glx_10.1.4-1 libglapi-mesa_10.1.4-1 libglib2.0-0_2.40.0-3 libgmp10_2:6.0.0+dfsg-2 libgomp1_4.9.0-6 libgraphite2-3_1.2.4-3 libharfbuzz0b_0.9.28-2 libice6_2:1.0.8-2 libisl10_0.12.2-1 libjbig0_2.0-2.1 libjpeg8_8d-2 libjpeg8-dev_8d-2 libklibc_2.0.2-1+rpi1 libkmod2_16-2 liblapack-dev_3.5.0-2 liblapack3_3.5.0-2 liblog-message-simple-perl_0.10-1 liblzma-dev_5.1.1alpha+20120614-2 liblzma5_5.1.1alpha+20120614-2 libmagic1_1:5.18-1 libmodule-pluggable-perl_5.1-1 libmount1_2.20.1-5.7 libmpc2_0.9-4 libmpc3_1.0.1-1 libmpfr4_3.1.2-1 libncurses5_5.9+20140118-1 libncurses5-dev_5.9+20140118-1 libncursesw5_5.9+20140118-1 libpam-modules_1.1.8-3 libpam-modules-bin_1.1.8-3 libpam-runtime_1.1.8-3 libpam0g_1.1.8-3 libpango-1.0-0_1.36.3-1 libpangocairo-1.0-0_1.36.3-1 libpangoft2-1.0-0_1.36.3-1 libpaper-utils_1.1.24+nmu3 libpaper1_1.1.24+nmu3 libpcre3_1:8.31-5 libpcre3-dev_1:8.31-5 libpcrecpp0_1:8.31-5 libpipeline1_1.3.0-1 libpixman-1-0_0.32.4-1 libpng12-0_1.2.50-1 libpng12-dev_1.2.50-1 libpod-latex-perl_0.61-1 libprocps0_1:3.3.4-2 libprocps3_1:3.3.9-2 libreadline-dev_6.3-6 libreadline6_6.3-6 libreadline6-dev_6.3-6 libselinux1_2.2.2-1 libsemanage-common_2.2-1 libsemanage1_2.2-1 libsepol1_2.2-1 libslang2_2.2.4-16 libsm6_2:1.2.1-2 libss2_1.42.9-3 libstdc++-4.8-dev_4.8.2-21 libstdc++6_4.9.0-6 libstdc++6-4.6-dev_4.6.4-5+rpi1 libswitch-perl_2.17-1 libtcl8.5_8.5.15-4 libterm-ui-perl_0.42-1 libthai-data_0.1.20-3 libthai0_0.1.20-3 libtiff5_4.0.3-8 libtimedate-perl_2.3000-2 libtinfo-dev_5.9+20140118-1 libtinfo5_5.9+20140118-1 libtk8.5_8.5.15-4 libubsan0_4.9.0-6 libudev0_175-7.2 libudev1_204-8 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-23.3 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.7 libx11-6_2:1.6.2-2 libx11-data_2:1.6.2-2 libx11-xcb1_2:1.6.2-2 libxau6_1:1.0.8-1 libxcb-dri2-0_1.10-3 libxcb-dri3-0_1.10-3 libxcb-glx0_1.10-3 libxcb-present0_1.10-3 libxcb-render0_1.10-3 libxcb-shm0_1.10-3 libxcb-sync1_1.10-3 libxcb1_1.10-3 libxdamage1_1:1.1.4-1 libxdmcp6_1:1.1.1-1 libxext6_2:1.3.2-1 libxfixes3_1:5.0.1-1 libxft2_2.3.1-2 libxml2_2.9.1+dfsg1-3 libxrender1_1:0.9.8-1 libxshmfence1_1.1-2 libxss1_1:1.2.2-1 libxt6_1:1.1.4-1 libxxf86vm1_1:1.1.3-1 linux-libc-dev_3.13.10-1+rpi1 login_1:4.1.5.1-1.1 lsb-base_4.1+Debian12+rpi1 make_3.81-8.3 makedev_2.3.1-93 man-db_2.6.7.1-1 mawk_1.3.3-17 mount_2.20.1-5.7 multiarch-support_2.18-5 nano_2.2.6-1.1 ncurses-base_5.9+20140118-1 ncurses-bin_5.9+20140118-1 passwd_1:4.1.5.1-1.1 patch_2.7.1-5 perl_5.18.2-2+b1 perl-base_5.18.2-2+b1 perl-modules_5.18.2-2 plymouth_0.8.8-16 po-debconf_1.0.16+nmu2 procps_1:3.3.9-2 r-base-core_3.1.0-1 r-base-dev_3.1.0-1 r-bioc-biocgenerics_0.10.0-1 r-bioc-iranges_1.22.8-1 r-bioc-xvector_0.4.0-1 raspbian-archive-keyring_20120528.2 readline-common_6.3-6 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-biostrings-dummy_0.invalid.0 sed_4.2.2-4 sensible-utils_0.0.9 startpar_0.59-3 sysv-rc_2.88dsf-53 sysvinit_2.88dsf-53 sysvinit-core_2.88dsf-53 sysvinit-utils_2.88dsf-53 tar_1.27.1-2 tzdata_2014b-1 ucf_3.0030 udev_204-8 unzip_6.0-12 util-linux_2.20.1-5.7 x11-common_1:7.7+7 xdg-utils_1.1.0~rc1+git20111210-7.1 xz-utils_5.1.1alpha+20120614-2 zip_3.0-8 zlib1g_1:1.2.8.dfsg-1+rpi1 zlib1g-dev_1:1.2.8.dfsg-1+rpi1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Fri Jun 13 09:18:43 2014 UTC using RSA key ID D1C646D1
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./r-bioc-biostrings_2.32.0-1.dsc
dpkg-source: info: extracting r-bioc-biostrings in r-bioc-biostrings-2.32.0
dpkg-source: info: unpacking r-bioc-biostrings_2.32.0.orig.tar.gz
dpkg-source: info: unpacking r-bioc-biostrings_2.32.0-1.debian.tar.xz
dpkg-source: info: applying use_debian_packaged_zlib.patch
Check disc space
────────────────
Sufficient free space for build
User Environment
────────────────
APT_CONFIG=/var/lib/sbuild/apt.conf
COLUMNS=80
CONSOLE=/dev/console
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INIT_VERSION=sysvinit-2.88
LC_ALL=POSIX
LINES=24
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PREVLEVEL=N
PWD=/
RUNLEVEL=2
SCHROOT_ALIAS_NAME=jessie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=jessie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=jessie-staging-armhf-sbuild-27a639e4-418a-479a-8f30-49f13c36a170
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
init=/sbin/init
previous=N
rootmnt=/root
runlevel=2
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-biostrings
dpkg-buildpackage: source version 2.32.0-1
dpkg-buildpackage: source distribution unstable
dpkg-source --before-build r-bioc-biostrings-2.32.0
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
test -x debian/rules
dh_clean
if test -d src; then \
find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
debian/rules build-arch
test -x debian/rules
mkdir -p "."
fakeroot debian/rules binary-arch
test -x debian/rules
dh_testroot
dh_prep
dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
echo "R:Depends=r-base-core (>= 3.1.0-1)" >> debian/r-bioc-biostrings.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-biostrings/usr/lib/R/site-library --clean \
. ; \
else \
R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-biostrings/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'Biostrings' ...
** libs
make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c BAB_class.c -o BAB_class.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c BitMatrix.c -o BitMatrix.o
BitMatrix.c: In function 'debug_BitMatrix':
BitMatrix.c:382:3: warning: left shift count >= width of type
bitcol0 = _new_BitCol(40, 33UL + (1UL << 39));
^
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c IRanges_stubs.c -o IRanges_stubs.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c MIndex_class.c -o MIndex_class.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c PreprocessedTB_class.c -o PreprocessedTB_class.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c R_init_Biostrings.c -o R_init_Biostrings.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RoSeqs_utils.c -o RoSeqs_utils.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c SparseList_utils.c -o SparseList_utils.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c XStringSetList_class.c -o XStringSetList_class.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c XStringSet_class.c -o XStringSet_class.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c XStringSet_io.c -o XStringSet_io.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c XString_class.c -o XString_class.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c XVector_stubs.c -o XVector_stubs.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c align_needwunsQS.c -o align_needwunsQS.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c align_pairwiseAlignment.c -o align_pairwiseAlignment.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c align_utils.c -o align_utils.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c find_palindromes.c -o find_palindromes.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c gtestsim.c -o gtestsim.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c inject_code.c -o inject_code.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c io_utils.c -o io_utils.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c letter_frequency.c -o letter_frequency.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c lowlevel_matching.c -o lowlevel_matching.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_BOC.c -o match_BOC.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_BOC2.c -o match_BOC2.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_PWM.c -o match_PWM.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_pattern.c -o match_pattern.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_pattern_boyermoore.c -o match_pattern_boyermoore.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_pattern_indels.c -o match_pattern_indels.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_pattern_shiftor.c -o match_pattern_shiftor.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_pdict.c -o match_pdict.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_pdict_ACtree2.c -o match_pdict_ACtree2.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_pdict_Twobit.c -o match_pdict_Twobit.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_pdict_utils.c -o match_pdict_utils.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c match_reporting.c -o match_reporting.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c matchprobes.c -o matchprobes.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c pmatchPattern.c -o pmatchPattern.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c replace_letter_at.c -o replace_letter_at.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c strutils.c -o strutils.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c translate.c -o translate.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c unstrsplit_methods.c -o unstrsplit_methods.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I"/usr/lib/R/site-library/IRanges/include" -I"/usr/lib/R/site-library/XVector/include" -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c xscat.c -o xscat.o
gcc -std=gnu99 -shared -Wl,-z,relro -o Biostrings.so BAB_class.o BitMatrix.o IRanges_stubs.o MIndex_class.o PreprocessedTB_class.o R_init_Biostrings.o RoSeqs_utils.o SparseList_utils.o XStringSetList_class.o XStringSet_class.o XStringSet_io.o XString_class.o XVector_stubs.o align_needwunsQS.o align_pairwiseAlignment.o align_utils.o find_palindromes.o gtestsim.o inject_code.o io_utils.o letter_frequency.o lowlevel_matching.o match_BOC.o match_BOC2.o match_PWM.o match_pattern.o match_pattern_boyermoore.o match_pattern_indels.o match_pattern_shiftor.o match_pdict.o match_pdict_ACtree2.o match_pdict_Twobit.o match_pdict_utils.o match_reporting.o matchprobes.o pmatchPattern.o replace_letter_at.o strutils.o translate.o unstrsplit_methods.o utils.o xscat.o -lz -L/usr/lib/R/lib -lR
make[1]: Leaving directory `/«PKGBUILDDIR»/src'
make[1]: Entering directory `/«PKGBUILDDIR»/src'
make[1]: Leaving directory `/«PKGBUILDDIR»/src'
installing to /«PKGBUILDDIR»/debian/r-bioc-biostrings/usr/lib/R/site-library/Biostrings/libs
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for 'setequal' from package 'base' in package 'Biostrings'
Creating a generic function for 'ls' from package 'base' in package 'Biostrings'
Creating a new generic function for 'offset' in package 'Biostrings'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (Biostrings)
rm -vf /«PKGBUILDDIR»/debian/r-bioc-biostrings/usr/lib/R/site-library/R.css \
/«PKGBUILDDIR»/debian/r-bioc-biostrings/usr/lib/R/site-library/Biostrings/COPYING \
/«PKGBUILDDIR»/debian/r-bioc-biostrings/usr/lib/R/site-library/Biostrings/LICENSE.txt
if test -f debian/overrides; then \
install -d /«PKGBUILDDIR»/debian/r-bioc-biostrings/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
/«PKGBUILDDIR»/debian/r-bioc-biostrings/usr/share/lintian/overrides/r-bioc-biostrings; \
fi
Adding cdbs dependencies to debian/r-bioc-biostrings.substvars
dh_installdirs -pr-bioc-biostrings
dh_installdocs -pr-bioc-biostrings ./NEWS ./TODO
dh_installexamples -pr-bioc-biostrings
dh_installman -pr-bioc-biostrings
dh_installinfo -pr-bioc-biostrings
dh_installmenu -pr-bioc-biostrings
dh_installcron -pr-bioc-biostrings
dh_installinit -pr-bioc-biostrings
dh_installdebconf -pr-bioc-biostrings
dh_installemacsen -pr-bioc-biostrings
dh_installcatalogs -pr-bioc-biostrings
dh_installpam -pr-bioc-biostrings
dh_installlogrotate -pr-bioc-biostrings
dh_installlogcheck -pr-bioc-biostrings
dh_installchangelogs -pr-bioc-biostrings ./CHANGES
dh_installudev -pr-bioc-biostrings
dh_lintian -pr-bioc-biostrings
dh_bugfiles -pr-bioc-biostrings
dh_install -pr-bioc-biostrings
dh_link -pr-bioc-biostrings
dh_installmime -pr-bioc-biostrings
dh_installgsettings -pr-bioc-biostrings
dh_strip -pr-bioc-biostrings
dh_compress -pr-bioc-biostrings
dh_fixperms -pr-bioc-biostrings
dh_makeshlibs -pr-bioc-biostrings
dh_installdeb -pr-bioc-biostrings
dh_perl -pr-bioc-biostrings
dh_shlibdeps -pr-bioc-biostrings
dh_gencontrol -pr-bioc-biostrings
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -pr-bioc-biostrings
dh_builddeb -pr-bioc-biostrings
dpkg-deb: building package `r-bioc-biostrings' in `../r-bioc-biostrings_2.32.0-1_armhf.deb'.
dpkg-genchanges -B -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../r-bioc-biostrings_2.32.0-1_armhf.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
dpkg-source --after-build r-bioc-biostrings-2.32.0
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20140619-0603
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
r-bioc-biostrings_2.32.0-1_armhf.changes:
─────────────────────────────────────────
Format: 1.8
Date: Fri, 13 Jun 2014 09:57:40 +0200
Source: r-bioc-biostrings
Binary: r-bioc-biostrings
Architecture: armhf
Version: 2.32.0-1
Distribution: jessie-staging
Urgency: medium
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
r-bioc-biostrings - GNU R string objects representing biological sequences
Changes:
r-bioc-biostrings (2.32.0-1) unstable; urgency=medium
.
* New upstream version
* Patch to use Debian packaged zlib
* Versioned (Build-)Depends from r-bioc-xvector
* Add autopkgtest
Checksums-Sha1:
019514186e0c23d7c4b100c34bde63fca30d76e9 2234746 r-bioc-biostrings_2.32.0-1_armhf.deb
Checksums-Sha256:
7fc3393ef4b9013cfc7ae68e79cb08474b484c7071ca9aff37373ca572e455e4 2234746 r-bioc-biostrings_2.32.0-1_armhf.deb
Files:
3710a5e2d4e158b6bde9c93f59c00103 2234746 gnu-r optional r-bioc-biostrings_2.32.0-1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
r-bioc-biostrings_2.32.0-1_armhf.deb
────────────────────────────────────
new debian package, version 2.0.
size 2234746 bytes: control archive=3177 bytes.
609 bytes, 13 lines control
7035 bytes, 80 lines md5sums
Package: r-bioc-biostrings
Version: 2.32.0-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 3105
Depends: r-base-core (>= 3.1.0-1), libc6 (>= 2.7), zlib1g (>= 1:1.1.4), r-bioc-xvector (>= 0.4.0)
Section: gnu-r
Priority: optional
Homepage: http://bioconductor.org/packages/release/bioc/html/Biostrings.html
Description: GNU R string objects representing biological sequences
Memory efficient string containers, string matching algorithms, and other
utilities, for fast manipulation of large biological sequences or set of
sequences.
drwxr-xr-x root/root 0 2014-06-19 06:03 ./
drwxr-xr-x root/root 0 2014-06-19 06:03 ./usr/
drwxr-xr-x root/root 0 2014-06-19 06:01 ./usr/lib/
drwxr-xr-x root/root 0 2014-06-19 06:01 ./usr/lib/R/
drwxr-xr-x root/root 0 2014-06-19 06:03 ./usr/lib/R/site-library/
drwxr-xr-x root/root 0 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/
-rw-r--r-- root/root 11108 2014-06-19 06:01 ./usr/lib/R/site-library/Biostrings/NAMESPACE
-rw-r--r-- root/root 17344 2014-06-19 06:01 ./usr/lib/R/site-library/Biostrings/NEWS
-rw-r--r-- root/root 2396 2014-06-19 06:01 ./usr/lib/R/site-library/Biostrings/DESCRIPTION
drwxr-xr-x root/root 0 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/Meta/
-rw-r--r-- root/root 1769 2014-06-19 06:01 ./usr/lib/R/site-library/Biostrings/Meta/package.rds
-rw-r--r-- root/root 7802 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/Meta/Rd.rds
-rw-r--r-- root/root 7971 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/Meta/hsearch.rds
-rw-r--r-- root/root 6345 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/Meta/links.rds
-rw-r--r-- root/root 320 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/Meta/data.rds
-rw-r--r-- root/root 454 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/Meta/vignette.rds
-rw-r--r-- root/root 2335 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/Meta/nsInfo.rds
drwxr-xr-x root/root 0 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/libs/
-rw-r--r-- root/root 182788 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/libs/Biostrings.so
drwxr-xr-x root/root 0 2014-06-19 06:02 ./usr/lib/R/site-library/Biostrings/R/
-rw-r--r-- root/root 1056 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/R/Biostrings
-rw-r--r-- root/root 877218 2014-06-19 06:02 ./usr/lib/R/site-library/Biostrings/R/Biostrings.rdb
-rw-r--r-- root/root 16084 2014-06-19 06:03 ./usr/lib/R/site-library/Biostrings/R/Biostrings.rdx
drwxr-xr-x root/root 0 2014-06-19 06:02 ./usr/lib/R/site-library/Biostrings/data/
-rw-r--r-- root/root 712 2014-06-19 06:02 ./usr/lib/R/site-library/Biostrings/data/BLOSUM100.rda
-rw-r--r-- root/root 635 2014-06-19 06:02 ./usr/lib/R/site-library/Biostrings/data/BLOSUM45.rda
-rw-r--r-- root/root 628 2014-06-19 06:02 ./usr/lib/R/site-library/Biostrings/data/BLOSUM50.rda
-rw-r--r-- root/root 620 2014-06-19 06:02 ./usr/lib/R/site-library/Biostrings/data/BLOSUM62.rda
-rw-r--r-- root/root 648 2014-06-19 06:02 ./usr/lib/R/site-library/Biostrings/data/BLOSUM80.rda
-rw-r--r-- root/root 4533 2014-06-19 06:02 ./usr/lib/R/site-library/Biostrings/data/HNF4alpha.rda
-rw-r--r-- root/root 673 2014-06-19 06:02 ./usr/lib/R/site-library/Biostrings/data/PAM120.rda
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┌──────────────────────────────────────────────────────────────────────────────┐
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
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Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 9156
Build-Time: 190
Distribution: jessie-staging
Host Architecture: armhf
Install-Time: 388
Job: r-bioc-biostrings_2.32.0-1
Machine Architecture: armhf
Package: r-bioc-biostrings
Package-Time: 635
Source-Version: 2.32.0-1
Space: 9156
Status: successful
Version: 2.32.0-1
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Finished at 20140619-0603
Build needed 00:10:35, 9156k disc space