Build log for r-base (3.6.2.20200221-1) on armhf

r-base → 3.6.2.20200221-1 → armhf → 2020-02-28 21:01:08

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-01

+==============================================================================+
| r-base 3.6.2.20200221-1 (armhf)              Fri, 28 Feb 2020 17:06:52 +0000 |
+==============================================================================+

Package: r-base
Version: 3.6.2.20200221-1
Source Version: 3.6.2.20200221-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bullseye-staging-armhf-sbuild-6f4783d1-f608-4bd2-b325-b54bcc321f58' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.6 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.7 MB]
Fetched 24.3 MB in 49s (492 kB/s)
Reading package lists...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'r-base' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/edd/r-base.git
Please use:
git clone https://salsa.debian.org/edd/r-base.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 33.4 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main r-base 3.6.2.20200221-1 (dsc) [3079 B]
Get:2 http://172.17.0.1/private bullseye-staging/main r-base 3.6.2.20200221-1 (tar) [33.3 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main r-base 3.6.2.20200221-1 (diff) [96.5 kB]
Fetched 33.4 MB in 6s (5245 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-base-N8m0p4/r-base-3.6.2.20200221' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-base-N8m0p4' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-9itVrL/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-9itVrL/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-9itVrL/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Packages [432 B]
Fetched 2108 B in 2s (1186 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-9itVrL/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 31 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12214 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: gcc (>= 4:4.1.0), g++ (>= 4:4.1.0), gfortran (>= 4:4.1.0), libblas-dev, liblapack-dev (>= 3.1.1), tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses5-dev, libreadline-dev, debhelper (>= 7.2.3), texinfo (>= 4.1-2), libbz2-dev, liblzma-dev, libpcre2-dev, libpcre3-dev, libcurl4-openssl-dev | libcurl4-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff5-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk | openjdk-10-jdk, mpack, bash-completion
Filtered Build-Depends: gcc (>= 4:4.1.0), g++ (>= 4:4.1.0), gfortran (>= 4:4.1.0), libblas-dev, liblapack-dev (>= 3.1.1), tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses5-dev, libreadline-dev, debhelper (>= 7.2.3), texinfo (>= 4.1-2), libbz2-dev, liblzma-dev, libpcre2-dev, libpcre3-dev, libcurl4-openssl-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff5-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk, mpack, bash-completion
dpkg-deb: building package 'sbuild-build-depends-r-base-dummy' in '/<<BUILDDIR>>/resolver-9itVrL/apt_archive/sbuild-build-depends-r-base-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-r-base-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Sources [808 B]
Get:5 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Packages [834 B]
Fetched 2975 B in 2s (1714 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-9itVrL/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install r-base build dependencies (apt-based resolver)
------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bash-completion bison bsdmainutils
  ca-certificates ca-certificates-java debhelper default-jdk
  default-jdk-headless default-jre default-jre-headless dh-autoreconf
  dh-strip-nondeterminism dwz file fontconfig fontconfig-config
  fonts-dejavu-core fonts-lmodern gettext gettext-base gfortran gfortran-9
  gir1.2-freedesktop gir1.2-glib-2.0 gir1.2-harfbuzz-0.0 gir1.2-pango-1.0
  groff-base icu-devtools intltool-debian java-common libapache-pom-java
  libarchive-zip-perl libasound2 libasound2-data libavahi-client3
  libavahi-common-data libavahi-common3 libblas-dev libblas3 libblkid-dev
  libbrotli1 libbsd0 libbz2-dev libcairo-gobject2 libcairo-script-interpreter2
  libcairo2 libcairo2-dev libcommons-logging-java libcommons-parent-java
  libcroco3 libcups2 libcurl4 libcurl4-openssl-dev libdatrie1 libdbus-1-3
  libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm-nouveau2
  libdrm-radeon1 libdrm2 libedit2 libelf1 libexpat1 libexpat1-dev libffi-dev
  libfile-stripnondeterminism-perl libfontbox-java libfontconfig1
  libfontconfig1-dev libfontenc1 libfreetype-dev libfreetype6 libfreetype6-dev
  libfribidi-dev libfribidi0 libgfortran-9-dev libgfortran5 libgif7
  libgirepository-1.0-1 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0
  libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libglvnd0
  libglx-mesa0 libglx0 libgnutls30 libgraphite2-3 libgraphite2-dev
  libgssapi-krb5-2 libharfbuzz-dev libharfbuzz-gobject0 libharfbuzz-icu0
  libharfbuzz0b libice-dev libice6 libicu-dev libicu63 libjbig-dev libjbig0
  libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1
  libkpathsea6 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2
  libllvm9 liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libmime-charset-perl
  libmount-dev libmpdec2 libncurses-dev libncurses5-dev libncurses6
  libnghttp2-14 libnspr4 libnss3 libpango-1.0-0 libpango1.0-dev
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpangoxft-1.0-0 libpaper-utils
  libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
  libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpcsclite1
  libpdfbox-java libpipeline1 libpixman-1-0 libpixman-1-dev libpng-dev
  libpng16-16 libpsl5 libptexenc1 libpthread-stubs0-dev libpython3-stdlib
  libpython3.7-minimal libpython3.7-stdlib libreadline-dev librtmp1
  libselinux1-dev libsensors-config libsensors5 libsepol1-dev libsigsegv2
  libsm-dev libsm6 libsombok3 libssh2-1 libssl1.1 libsub-override-perl
  libsynctex2 libtcl8.6 libteckit0 libtexlua53 libtexluajit2
  libtext-unidecode-perl libthai-data libthai0 libtiff-dev libtiff5
  libtiff5-dev libtiffxx5 libtinfo5 libtk8.6 libtool libuchardet0
  libunicode-linebreak-perl libunwind8 libwebp6 libx11-6 libx11-data
  libx11-dev libx11-xcb1 libxau-dev libxau6 libxaw7 libxcb-dri2-0
  libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-render0-dev
  libxcb-shm0 libxcb-shm0-dev libxcb-sync1 libxcb1 libxcb1-dev libxdamage1
  libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxfont2 libxft-dev
  libxft2 libxi6 libxkbfile1 libxml-libxml-perl libxml-namespacesupport-perl
  libxml-sax-base-perl libxml-sax-perl libxml2 libxmu6 libxmuu1 libxpm4
  libxrender-dev libxrender1 libxshmfence1 libxss-dev libxss1 libxt-dev libxt6
  libxtst6 libxxf86vm1 libz3-4 libzzip-0-13 m4 man-db mime-support mpack
  openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre
  openjdk-11-jre-headless openssl pango1.0-tools pkg-config po-debconf
  preview-latex-style python3 python3-distutils python3-lib2to3
  python3-minimal python3.7 python3.7-minimal sensible-utils t1utils tcl8.6
  tcl8.6-dev tex-common texinfo texlive-base texlive-binaries
  texlive-extra-utils texlive-fonts-extra texlive-fonts-recommended
  texlive-latex-base texlive-latex-extra texlive-latex-recommended
  texlive-pictures texlive-plain-generic tk8.6 tk8.6-dev ucf uuid-dev
  x11-common x11-xkb-utils x11proto-core-dev x11proto-dev
  x11proto-scrnsaver-dev x11proto-xext-dev xauth xdg-utils xfonts-base
  xfonts-encodings xfonts-utils xkb-data xorg-sgml-doctools xserver-common
  xtrans-dev xvfb zlib1g zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist
  whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev
  gfortran-doc gfortran-9-doc libcoarrays-dev groff libasound2-plugins
  alsa-utils liblapack-doc libcairo2-doc libavalon-framework-java
  libcommons-logging-java-doc libexcalibur-logkit-java liblog4j1.2-java
  cups-common libcurl4-doc libidn11-dev libkrb5-dev libldap2-dev librtmp-dev
  libssh2-1-dev libssl-dev freetype2-doc libgirepository1.0-dev libglib2.0-doc
  libgdk-pixbuf2.0-bin | libgdk-pixbuf2.0-dev libxml2-utils gnutls-bin
  libgraphite2-utils krb5-doc krb5-user libice-doc icu-doc liblcms2-utils
  liblzma-doc libencode-hanextra-perl libpod2-base-perl ncurses-doc
  imagemagick libpango1.0-doc pcscd readline-doc lm-sensors libsm-doc
  libtool-doc gcj-jdk libx11-doc libxcb-doc libxext-doc libxt-doc m4-doc
  apparmor less www-browser mail-transport-agent inews openjdk-11-demo
  openjdk-11-source visualvm libnss-mdns fonts-dejavu-extra
  fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei
  | fonts-wqy-zenhei fonts-indic libmail-box-perl python3-doc python3-tk
  python3-venv python3.7-venv python3.7-doc binfmt-support tcl-tclreadline
  tcl8.6-doc ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer
  xzdec chktex dvidvi dvipng fragmaster lacheck latexdiff latexmk purifyeps
  xindy cm-super texlive-fonts-extra-doc texlive-fonts-recommended-doc
  texlive-latex-base-doc python3-pygments icc-profiles libfile-which-perl
  libspreadsheet-parseexcel-perl texlive-latex-extra-doc
  texlive-latex-recommended-doc texlive-luatex texlive-pstricks dot2tex prerex
  ruby-tcltk | libtcltk-ruby texlive-pictures-doc vprerex tk8.6-doc
Recommended packages:
  curl | wget | lynx alsa-ucm-conf alsa-topology-conf bzip2-doc dbus
  libarchive-cpio-perl shared-mime-info xdg-user-dirs krb5-locales libgpm2
  libpng-tools publicsuffix libltdl-dev libwww-perl libxml-sax-expat-perl
  libatk-wrapper-java-jni fonts-dejavu-extra libmail-sendmail-perl lmodern
  dvisvgm ghostscript libfile-homedir-perl liblog-log4perl-perl
  libyaml-tiny-perl ruby | ruby-interpreter fonts-adf-accanthis
  fonts-adf-berenis fonts-adf-gillius fonts-adf-universalis fonts-cabin
  fonts-cantarell fonts-comfortaa fonts-croscore fonts-crosextra-caladea
  fonts-crosextra-carlito fonts-ebgaramond fonts-ebgaramond-extra
  fonts-font-awesome fonts-freefont-otf fonts-freefont-ttf fonts-gfs-artemisia
  fonts-gfs-complutum fonts-gfs-didot fonts-gfs-neohellenic fonts-gfs-olga
  fonts-gfs-solomos fonts-go fonts-junicode fonts-lato fonts-linuxlibertine
  fonts-lobstertwo fonts-noto-core fonts-noto-mono fonts-oflb-asana-math
  fonts-open-sans fonts-roboto-unhinted fonts-sil-gentium
  fonts-sil-gentium-basic fonts-sil-gentiumplus fonts-sil-gentiumplus-compact
  fonts-stix texlive-fonts-extra-links tex-gyre tipa tk xterm
  | x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
  libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bash-completion bison bsdmainutils
  ca-certificates ca-certificates-java debhelper default-jdk
  default-jdk-headless default-jre default-jre-headless dh-autoreconf
  dh-strip-nondeterminism dwz file fontconfig fontconfig-config
  fonts-dejavu-core fonts-lmodern gettext gettext-base gfortran gfortran-9
  gir1.2-freedesktop gir1.2-glib-2.0 gir1.2-harfbuzz-0.0 gir1.2-pango-1.0
  groff-base icu-devtools intltool-debian java-common libapache-pom-java
  libarchive-zip-perl libasound2 libasound2-data libavahi-client3
  libavahi-common-data libavahi-common3 libblas-dev libblas3 libblkid-dev
  libbrotli1 libbsd0 libbz2-dev libcairo-gobject2 libcairo-script-interpreter2
  libcairo2 libcairo2-dev libcommons-logging-java libcommons-parent-java
  libcroco3 libcups2 libcurl4 libcurl4-openssl-dev libdatrie1 libdbus-1-3
  libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm-nouveau2
  libdrm-radeon1 libdrm2 libedit2 libelf1 libexpat1 libexpat1-dev libffi-dev
  libfile-stripnondeterminism-perl libfontbox-java libfontconfig1
  libfontconfig1-dev libfontenc1 libfreetype-dev libfreetype6 libfreetype6-dev
  libfribidi-dev libfribidi0 libgfortran-9-dev libgfortran5 libgif7
  libgirepository-1.0-1 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0
  libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libglvnd0
  libglx-mesa0 libglx0 libgraphite2-3 libgraphite2-dev libgssapi-krb5-2
  libharfbuzz-dev libharfbuzz-gobject0 libharfbuzz-icu0 libharfbuzz0b
  libice-dev libice6 libicu-dev libicu63 libjbig-dev libjbig0 libjpeg-dev
  libjpeg62-turbo libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkpathsea6
  libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblcms2-2 libllvm9
  liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libmime-charset-perl
  libmount-dev libmpdec2 libncurses-dev libncurses5-dev libncurses6
  libnghttp2-14 libnspr4 libnss3 libpango-1.0-0 libpango1.0-dev
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpangoxft-1.0-0 libpaper-utils
  libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
  libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpcsclite1
  libpdfbox-java libpipeline1 libpixman-1-0 libpixman-1-dev libpng-dev
  libpng16-16 libpsl5 libptexenc1 libpthread-stubs0-dev libpython3-stdlib
  libpython3.7-minimal libpython3.7-stdlib libreadline-dev librtmp1
  libselinux1-dev libsensors-config libsensors5 libsepol1-dev libsigsegv2
  libsm-dev libsm6 libsombok3 libssh2-1 libssl1.1 libsub-override-perl
  libsynctex2 libtcl8.6 libteckit0 libtexlua53 libtexluajit2
  libtext-unidecode-perl libthai-data libthai0 libtiff-dev libtiff5
  libtiff5-dev libtiffxx5 libtinfo5 libtk8.6 libtool libuchardet0
  libunicode-linebreak-perl libunwind8 libwebp6 libx11-6 libx11-data
  libx11-dev libx11-xcb1 libxau-dev libxau6 libxaw7 libxcb-dri2-0
  libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-render0 libxcb-render0-dev
  libxcb-shm0 libxcb-shm0-dev libxcb-sync1 libxcb1 libxcb1-dev libxdamage1
  libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxfont2 libxft-dev
  libxft2 libxi6 libxkbfile1 libxml-libxml-perl libxml-namespacesupport-perl
  libxml-sax-base-perl libxml-sax-perl libxml2 libxmu6 libxmuu1 libxpm4
  libxrender-dev libxrender1 libxshmfence1 libxss-dev libxss1 libxt-dev libxt6
  libxtst6 libxxf86vm1 libz3-4 libzzip-0-13 m4 man-db mime-support mpack
  openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre
  openjdk-11-jre-headless openssl pango1.0-tools pkg-config po-debconf
  preview-latex-style python3 python3-distutils python3-lib2to3
  python3-minimal python3.7 python3.7-minimal
  sbuild-build-depends-r-base-dummy sensible-utils t1utils tcl8.6 tcl8.6-dev
  tex-common texinfo texlive-base texlive-binaries texlive-extra-utils
  texlive-fonts-extra texlive-fonts-recommended texlive-latex-base
  texlive-latex-extra texlive-latex-recommended texlive-pictures
  texlive-plain-generic tk8.6 tk8.6-dev ucf uuid-dev x11-common x11-xkb-utils
  x11proto-core-dev x11proto-dev x11proto-scrnsaver-dev x11proto-xext-dev
  xauth xdg-utils xfonts-base xfonts-encodings xfonts-utils xkb-data
  xorg-sgml-doctools xserver-common xtrans-dev xvfb zlib1g-dev
The following packages will be upgraded:
  libgnutls30 zlib1g
2 upgraded, 298 newly installed, 0 to remove and 29 not upgraded.
Need to get 953 MB of archives.
After this operation, 2965 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-9itVrL/apt_archive ./ sbuild-build-depends-r-base-dummy 0.invalid.0 [1120 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.1+20191019-1 [316 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-4 [783 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf zlib1g armhf 1:1.2.11.dfsg-1.2 [84.6 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.0-2 [1261 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1d-2 [1268 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-minimal armhf 3.7.6-1+b1 [585 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf python3.7-minimal armhf 3.7.6-1+b1 [1525 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.7.5-3 [36.8 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.64 [37.8 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libmpdec2 armhf 2.4.2-3 [68.1 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-stdlib armhf 3.7.6-1+b1 [1669 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf python3.7 armhf 3.7.6-1+b1 [351 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.7.5-3 [20.2 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.7.5-3 [62.1 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf tex-common all 6.13 [53.2 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libgnutls30 armhf 3.6.12-2 [1139 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf bash-completion all 1:2.10-1 [228 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-4 [262 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-4 [112 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-4 [66.9 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf bison armhf 2:3.5.1+dfsg-1 [919 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1d-2 [806 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20190110 [157 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf java-common all 0.72 [14.5 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common-data armhf 0.7-5 [122 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libavahi-common3 armhf 0.7-5 [51.2 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libdbus-1-3 armhf 1.12.16-2+b1 [189 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libavahi-client3 armhf 0.7-5 [54.2 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-6+b1 [61.5 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-6+b1 [112 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-6+b1 [316 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-6+b1 [134 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libcups2 armhf 2.3.1-7 [308 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-2 [274 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libnspr4 armhf 2:4.24-1 [90.2 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libnss3 armhf 2:3.49.1-1 [979 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libasound2-data all 1.2.1.2-2 [38.2 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libasound2 armhf 1.2.1.2-2 [295 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libpcsclite1 armhf 1.8.26-3 [56.4 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.13.1-5 [133 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.8-1 [298 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.8-1 [691 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libxi6 armhf 2:1.7.9-1 [77.8 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libxtst6 armhf 2:1.2.3-1 [26.3 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf openjdk-11-jre-headless armhf 11.0.6+10-2 [33.1 MB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf default-jre-headless armhf 2:1.11-72+b4 [11.2 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates-java all 20190909 [15.7 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-13 [513 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.9 [183 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.67-1 [104 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.6.3-2 [14.7 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.62.4-2 [1138 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-2 [7974 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.4+dfsg1-8 [593 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.9 [994 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libglvnd0 armhf 1.3.1-1 [55.2 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libdrm-common all 2.4.100-4+rpi1 [14.3 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libdrm2 armhf 2.4.100-4+rpi1 [37.1 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libglapi-mesa armhf 19.3.3-1 [79.0 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libx11-xcb1 armhf 2:1.6.8-1 [190 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri2-0 armhf 1.13.1-5 [101 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libxcb-dri3-0 armhf 1.13.1-5 [100 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libxcb-glx0 armhf 1.13.1-5 [115 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libxcb-present0 armhf 1.13.1-5 [99.3 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libxcb-sync1 armhf 1.13.1-5 [102 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libxfixes3 armhf 1:5.0.3-1 [20.6 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libxdamage1 armhf 1:1.1.5-1 [15.1 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libdrm-amdgpu1 armhf 2.4.100-4+rpi1 [27.0 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libdrm-nouveau2 armhf 2.4.100-4+rpi1 [24.7 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libdrm-radeon1 armhf 2.4.100-4+rpi1 [28.9 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20191231-1 [79.2 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libz3-4 armhf 4.8.7-4 [5477 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libllvm9 armhf 1:9.0.1-8+rpi1 [13.1 MB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libsensors-config all 1:3.6.0-2 [32.0 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libsensors5 armhf 1:3.6.0-2 [50.2 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libgl1-mesa-dri armhf 19.3.3-1 [5676 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libglx-mesa0 armhf 19.3.3-1 [169 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libglx0 armhf 1.3.1-1 [25.7 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libgl1 armhf 1.3.1-1 [105 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libgif7 armhf 5.1.9-1 [42.5 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf openjdk-11-jre armhf 11.0.6+10-2 [30.7 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf default-jre armhf 2:1.11-72+b4 [1044 B]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf openjdk-11-jdk-headless armhf 11.0.6+10-2 [184 MB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf default-jdk-headless armhf 2:1.11-72+b4 [1100 B]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf openjdk-11-jdk armhf 11.0.6+10-2 [4720 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf default-jdk armhf 2:1.11-72+b4 [1056 B]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf fonts-lmodern all 2.004.5-6 [4539 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 9.2.1-25+rpi1 [231 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-9-dev armhf 9.2.1-25+rpi1 [279 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf gfortran-9 armhf 9.2.1-25+rpi1 [8095 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:9.2.1-3.1+rpi1 [1440 B]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libgirepository-1.0-1 armhf 1.62.0-5 [80.8 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf gir1.2-glib-2.0 armhf 1.62.0-5 [146 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf gir1.2-freedesktop armhf 1.62.0-5 [32.0 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.13-11 [70.1 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.4-1+rpi1 [1308 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf gir1.2-harfbuzz-0.0 armhf 2.6.4-1+rpi1 [997 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b1 [36.4 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.42.4-8 [168 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.13.1-5 [108 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.13.1-5 [99.4 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-8 [62.4 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-8 [52.1 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libpangoxft-1.0-0 armhf 1.42.4-8 [47.5 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf gir1.2-pango-1.0 armhf 1.42.4-8 [55.6 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 63.2-2 [163 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libapache-pom-java all 18-1 [4676 B]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-1 [108 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.9.0-1 [113 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf uuid-dev armhf 2.34-0.1 [92.5 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf libblkid-dev armhf 2.34-0.1 [212 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6 [261 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-2 [27.7 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf libcairo-gobject2 armhf 1.16.0-4 [123 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf liblzo2-2 armhf 2.10-2 [50.2 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf libcairo-script-interpreter2 armhf 1.16.0-4 [150 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.9-1 [119 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1.2 [203 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-2 [276 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf libfreetype-dev armhf 2.10.1-2 [482 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6-dev armhf 2.10.1-2 [63.8 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29-6 [59.8 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1-dev armhf 2.13.1-2 [943 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf xorg-sgml-doctools all 1:1.11-1 [21.9 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf x11proto-dev all 2018.4-4 [251 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf x11proto-core-dev all 2018.4-4 [3128 B]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf libxau-dev armhf 1:1.0.8-1+b2 [22.4 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.9 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf xtrans-dev all 1.3.5-1 [100 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf libpthread-stubs0-dev armhf 0.4-1 [5344 B]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf libxcb1-dev armhf 1.13.1-5 [170 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf libx11-dev armhf 2:1.6.8-1 [760 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf libxrender-dev armhf 1:0.9.10-1 [37.7 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf x11proto-xext-dev all 2018.4-4 [3128 B]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf libxext-dev armhf 2:1.3.3-1+b2 [102 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf libice-dev armhf 2:1.0.9-2 [58.8 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf libsm-dev armhf 2:1.2.3-1 [35.4 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-dev armhf 0.36.0-1 [477 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0-dev armhf 1.13.1-5 [112 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0-dev armhf 1.13.1-5 [101 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf libffi-dev armhf 3.3-3 [57.9 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-data all 2.62.4-2 [1121 kB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-bin armhf 2.62.4-2 [124 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.0-1 [78.3 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.0-1 [145 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-dev-bin armhf 2.62.4-2 [163 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf libmount-dev armhf 2.34-0.1 [212 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-12 [234 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-12 [227 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-12 [564 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf libsepol1-dev armhf 3.0-1 [306 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.34-7 [181 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix2 armhf 10.34-7 [44.7 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.34-7 [614 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf libselinux1-dev armhf 3.0-1 [158 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-dev armhf 2.62.4-2 [1432 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf libcairo2-dev armhf 1.16.0-4 [619 kB]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf libcommons-parent-java all 43-1 [10.8 kB]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf libcommons-logging-java all 1.2-2 [62.2 kB]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.40.0-1+b2 [74.2 kB]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.67.0-2 [286 kB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf libcurl4-openssl-dev armhf 7.67.0-2 [359 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf libfontbox-java all 1:1.8.16-2 [211 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf libfontenc1 armhf 1:1.1.3-1 [22.2 kB]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf libfribidi-dev armhf 1.0.8-2 [103 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-dev armhf 1.3.13-11 [23.9 kB]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz-icu0 armhf 2.6.4-1+rpi1 [976 kB]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz-gobject0 armhf 2.6.4-1+rpi1 [988 kB]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-2 [8846 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz-dev armhf 2.6.4-1+rpi1 [1424 kB]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf libjbig-dev armhf 2.1-3.1+b2 [27.7 kB]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf libkpathsea6 armhf 2019.20190605.51237-3 [159 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-1 [1597 kB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-1 [2981 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf libmime-charset-perl all 1.012.2-1 [35.4 kB]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.1+20191019-1 [79.5 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.1+20191019-1 [284 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf libncurses5-dev armhf 6.1+20191019-1 [940 B]
Get:235 http://172.17.0.1/private bullseye-staging/main armhf libxft-dev armhf 2.3.2-2 [60.3 kB]
Get:236 http://172.17.0.1/private bullseye-staging/main armhf pango1.0-tools armhf 1.42.4-8 [53.5 kB]
Get:237 http://172.17.0.1/private bullseye-staging/main armhf libpango1.0-dev armhf 1.42.4-8 [153 kB]
Get:238 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:239 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:240 http://172.17.0.1/private bullseye-staging/main armhf libpdfbox-java all 1:1.8.16-2 [5205 kB]
Get:241 http://172.17.0.1/private bullseye-staging/main armhf libptexenc1 armhf 2019.20190605.51237-3 [60.0 kB]
Get:242 http://172.17.0.1/private bullseye-staging/main armhf libreadline-dev armhf 8.0-3 [114 kB]
Get:243 http://172.17.0.1/private bullseye-staging/main armhf libsombok3 armhf 2.4.0-2 [26.8 kB]
Get:244 http://172.17.0.1/private bullseye-staging/main armhf libsynctex2 armhf 2019.20190605.51237-3 [68.8 kB]
Get:245 http://172.17.0.1/private bullseye-staging/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [886 kB]
Get:246 http://172.17.0.1/private bullseye-staging/main armhf libteckit0 armhf 2.5.8+ds2-5 [245 kB]
Get:247 http://172.17.0.1/private bullseye-staging/main armhf libtexlua53 armhf 2019.20190605.51237-3 [99.7 kB]
Get:248 http://172.17.0.1/private bullseye-staging/main armhf libtexluajit2 armhf 2019.20190605.51237-3 [206 kB]
Get:249 http://172.17.0.1/private bullseye-staging/main armhf libtext-unidecode-perl all 1.30-1 [103 kB]
Get:250 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:251 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:252 http://172.17.0.1/private bullseye-staging/main armhf libtiffxx5 armhf 4.1.0+git191117-2 [117 kB]
Get:253 http://172.17.0.1/private bullseye-staging/main armhf libtiff-dev armhf 4.1.0+git191117-2 [362 kB]
Get:254 http://172.17.0.1/private bullseye-staging/main armhf libtiff5-dev armhf 4.1.0+git191117-2 [113 kB]
Get:255 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:256 http://172.17.0.1/private bullseye-staging/main armhf libtk8.6 armhf 8.6.10-1 [678 kB]
Get:257 http://172.17.0.1/private bullseye-staging/main armhf libunicode-linebreak-perl armhf 0.0.20190101-1+b1 [99.4 kB]
Get:258 http://172.17.0.1/private bullseye-staging/main armhf libunwind8 armhf 1.2.1-9 [48.3 kB]
Get:259 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:260 http://172.17.0.1/private bullseye-staging/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.1 kB]
Get:261 http://172.17.0.1/private bullseye-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:262 http://172.17.0.1/private bullseye-staging/main armhf libxaw7 armhf 2:1.0.13-1+b2 [163 kB]
Get:263 http://172.17.0.1/private bullseye-staging/main armhf libxfont2 armhf 1:2.0.3-1 [120 kB]
Get:264 http://172.17.0.1/private bullseye-staging/main armhf libxkbfile1 armhf 1:1.0.9-2 [65.4 kB]
Get:265 http://172.17.0.1/private bullseye-staging/main armhf libxml-namespacesupport-perl all 1.12-1 [14.8 kB]
Get:266 http://172.17.0.1/private bullseye-staging/main armhf libxml-sax-base-perl all 1.09-1 [20.4 kB]
Get:267 http://172.17.0.1/private bullseye-staging/main armhf libxml-sax-perl all 1.02+dfsg-1 [59.0 kB]
Get:268 http://172.17.0.1/private bullseye-staging/main armhf libxml-libxml-perl armhf 2.0134+dfsg-1+b1 [328 kB]
Get:269 http://172.17.0.1/private bullseye-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:270 http://172.17.0.1/private bullseye-staging/main armhf x11proto-scrnsaver-dev all 2018.4-4 [3136 B]
Get:271 http://172.17.0.1/private bullseye-staging/main armhf libxss-dev armhf 1:1.2.3-1 [23.0 kB]
Get:272 http://172.17.0.1/private bullseye-staging/main armhf libxt-dev armhf 1:1.1.5-1+b3 [390 kB]
Get:273 http://172.17.0.1/private bullseye-staging/main armhf libzzip-0-13 armhf 0.13.62-3.2 [51.6 kB]
Get:274 http://172.17.0.1/private bullseye-staging/main armhf mpack armhf 1.6-8.2 [31.2 kB]
Get:275 http://172.17.0.1/private bullseye-staging/main armhf preview-latex-style all 11.91-2 [201 kB]
Get:276 http://172.17.0.1/private bullseye-staging/main armhf t1utils armhf 1.41-3 [52.1 kB]
Get:277 http://172.17.0.1/private bullseye-staging/main armhf tcl8.6 armhf 8.6.10+dfsg-1 [123 kB]
Get:278 http://172.17.0.1/private bullseye-staging/main armhf tcl8.6-dev armhf 8.6.10+dfsg-1 [917 kB]
Get:279 http://172.17.0.1/private bullseye-staging/main armhf texinfo armhf 6.7.0.dfsg.2-5 [1745 kB]
Get:280 http://172.17.0.1/private bullseye-staging/main armhf texlive-binaries armhf 2019.20190605.51237-3 [5748 kB]
Get:281 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:282 http://172.17.0.1/private bullseye-staging/main armhf texlive-base all 2019.20200218-1 [20.9 MB]
Get:283 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-base all 2019.20200218-1 [1019 kB]
Get:284 http://172.17.0.1/private bullseye-staging/main armhf texlive-extra-utils all 2019.202000218-1 [43.9 MB]
Get:285 http://172.17.0.1/private bullseye-staging/main armhf texlive-fonts-extra all 2019.202000218-1 [460 MB]
Get:286 http://172.17.0.1/private bullseye-staging/main armhf texlive-fonts-recommended all 2019.20200218-1 [5002 kB]
Get:287 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-recommended all 2019.20200218-1 [15.7 MB]
Get:288 http://172.17.0.1/private bullseye-staging/main armhf texlive-pictures all 2019.20200218-1 [4526 kB]
Get:289 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-extra all 2019.202000218-1 [12.9 MB]
Get:290 http://172.17.0.1/private bullseye-staging/main armhf texlive-plain-generic all 2019.202000218-1 [24.6 MB]
Get:291 http://172.17.0.1/private bullseye-staging/main armhf tk8.6 armhf 8.6.10-1 [71.9 kB]
Get:292 http://172.17.0.1/private bullseye-staging/main armhf tk8.6-dev armhf 8.6.10-1 [700 kB]
Get:293 http://172.17.0.1/private bullseye-staging/main armhf x11-xkb-utils armhf 7.7+4 [138 kB]
Get:294 http://172.17.0.1/private bullseye-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:295 http://172.17.0.1/private bullseye-staging/main armhf xfonts-encodings all 1:1.0.4-2 [574 kB]
Get:296 http://172.17.0.1/private bullseye-staging/main armhf xfonts-utils armhf 1:7.7+6 [82.5 kB]
Get:297 http://172.17.0.1/private bullseye-staging/main armhf xfonts-base all 1:1.0.5 [5897 kB]
Get:298 http://172.17.0.1/private bullseye-staging/main armhf xkb-data all 2.26-2 [681 kB]
Get:299 http://172.17.0.1/private bullseye-staging/main armhf xserver-common all 2:1.20.7-3 [2255 kB]
Get:300 http://172.17.0.1/private bullseye-staging/main armhf xvfb armhf 2:1.20.7-3 [2868 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 953 MB in 3min 7s (5089 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 12214 files and directories currently installed.)
Preparing to unpack .../0-libbsd0_0.10.0-1_armhf.deb ...
Unpacking libbsd0:armhf (0.10.0-1) ...
Selecting previously unselected package libtinfo5:armhf.
Preparing to unpack .../1-libtinfo5_6.1+20191019-1_armhf.deb ...
Unpacking libtinfo5:armhf (6.1+20191019-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../2-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../3-libuchardet0_0.0.6-3_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.6-3) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../4-groff-base_1.22.4-4_armhf.deb ...
Unpacking groff-base (1.22.4-4) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../5-libpipeline1_1.5.2-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.2-2) ...
Preparing to unpack .../6-zlib1g_1%3a1.2.11.dfsg-1.2_armhf.deb ...
Unpacking zlib1g:armhf (1:1.2.11.dfsg-1.2) over (1:1.2.11.dfsg-1) ...
Setting up zlib1g:armhf (1:1.2.11.dfsg-1.2) ...
Selecting previously unselected package man-db.
(Reading database ... 12545 files and directories currently installed.)
Preparing to unpack .../man-db_2.9.0-2_armhf.deb ...
Unpacking man-db (2.9.0-2) ...
Selecting previously unselected package libssl1.1:armhf.
Preparing to unpack .../libssl1.1_1.1.1d-2_armhf.deb ...
Unpacking libssl1.1:armhf (1.1.1d-2) ...
Selecting previously unselected package libpython3.7-minimal:armhf.
Preparing to unpack .../libpython3.7-minimal_3.7.6-1+b1_armhf.deb ...
Unpacking libpython3.7-minimal:armhf (3.7.6-1+b1) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../libexpat1_2.2.9-1_armhf.deb ...
Unpacking libexpat1:armhf (2.2.9-1) ...
Selecting previously unselected package python3.7-minimal.
Preparing to unpack .../python3.7-minimal_3.7.6-1+b1_armhf.deb ...
Unpacking python3.7-minimal (3.7.6-1+b1) ...
Setting up libssl1.1:armhf (1.1.1d-2) ...
Setting up libpython3.7-minimal:armhf (3.7.6-1+b1) ...
Setting up libexpat1:armhf (2.2.9-1) ...
Setting up python3.7-minimal (3.7.6-1+b1) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 13136 files and directories currently installed.)
Preparing to unpack .../0-python3-minimal_3.7.5-3_armhf.deb ...
Unpacking python3-minimal (3.7.5-3) ...
Selecting previously unselected package mime-support.
Preparing to unpack .../1-mime-support_3.64_all.deb ...
Unpacking mime-support (3.64) ...
Selecting previously unselected package libmpdec2:armhf.
Preparing to unpack .../2-libmpdec2_2.4.2-3_armhf.deb ...
Unpacking libmpdec2:armhf (2.4.2-3) ...
Selecting previously unselected package libpython3.7-stdlib:armhf.
Preparing to unpack .../3-libpython3.7-stdlib_3.7.6-1+b1_armhf.deb ...
Unpacking libpython3.7-stdlib:armhf (3.7.6-1+b1) ...
Selecting previously unselected package python3.7.
Preparing to unpack .../4-python3.7_3.7.6-1+b1_armhf.deb ...
Unpacking python3.7 (3.7.6-1+b1) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../5-libpython3-stdlib_3.7.5-3_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.7.5-3) ...
Setting up python3-minimal (3.7.5-3) ...
Selecting previously unselected package python3.
(Reading database ... 13575 files and directories currently installed.)
Preparing to unpack .../python3_3.7.5-3_armhf.deb ...
Unpacking python3 (3.7.5-3) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../sensible-utils_0.0.12+nmu1_all.deb ...
Unpacking sensible-utils (0.0.12+nmu1) ...
Selecting previously unselected package ucf.
Preparing to unpack .../ucf_3.0038+nmu1_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0038+nmu1) ...
Selecting previously unselected package tex-common.
Preparing to unpack .../tex-common_6.13_all.deb ...
Unpacking tex-common (6.13) ...
Preparing to unpack .../libgnutls30_3.6.12-2_armhf.deb ...
Unpacking libgnutls30:armhf (3.6.12-2) over (3.6.11.1-2) ...
Setting up libgnutls30:armhf (3.6.12-2) ...
Selecting previously unselected package bash-completion.
(Reading database ... 13705 files and directories currently installed.)
Preparing to unpack .../000-bash-completion_1%3a2.10-1_all.deb ...
Unpacking bash-completion (1:2.10-1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../001-libmagic-mgc_1%3a5.38-4_armhf.deb ...
Unpacking libmagic-mgc (1:5.38-4) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../002-libmagic1_1%3a5.38-4_armhf.deb ...
Unpacking libmagic1:armhf (1:5.38-4) ...
Selecting previously unselected package file.
Preparing to unpack .../003-file_1%3a5.38-4_armhf.deb ...
Unpacking file (1:5.38-4) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../004-gettext-base_0.19.8.1-10_armhf.deb ...
Unpacking gettext-base (0.19.8.1-10) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../005-libsigsegv2_2.12-2_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../006-m4_1.4.18-4_armhf.deb ...
Unpacking m4 (1.4.18-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../007-autoconf_2.69-11.1_all.deb ...
Unpacking autoconf (2.69-11.1) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../008-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../009-automake_1%3a1.16.1-4_all.deb ...
Unpacking automake (1:1.16.1-4) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../010-autopoint_0.19.8.1-10_all.deb ...
Unpacking autopoint (0.19.8.1-10) ...
Selecting previously unselected package bison.
Preparing to unpack .../011-bison_2%3a3.5.1+dfsg-1_armhf.deb ...
Unpacking bison (2:3.5.1+dfsg-1) ...
Selecting previously unselected package openssl.
Preparing to unpack .../012-openssl_1.1.1d-2_armhf.deb ...
Unpacking openssl (1.1.1d-2) ...
Selecting previously unselected package ca-certificates.
Preparing to unpack .../013-ca-certificates_20190110_all.deb ...
Unpacking ca-certificates (20190110) ...
Selecting previously unselected package java-common.
Preparing to unpack .../014-java-common_0.72_all.deb ...
Unpacking java-common (0.72) ...
Selecting previously unselected package libavahi-common-data:armhf.
Preparing to unpack .../015-libavahi-common-data_0.7-5_armhf.deb ...
Unpacking libavahi-common-data:armhf (0.7-5) ...
Selecting previously unselected package libavahi-common3:armhf.
Preparing to unpack .../016-libavahi-common3_0.7-5_armhf.deb ...
Unpacking libavahi-common3:armhf (0.7-5) ...
Selecting previously unselected package libdbus-1-3:armhf.
Preparing to unpack .../017-libdbus-1-3_1.12.16-2+b1_armhf.deb ...
Unpacking libdbus-1-3:armhf (1.12.16-2+b1) ...
Selecting previously unselected package libavahi-client3:armhf.
Preparing to unpack .../018-libavahi-client3_0.7-5_armhf.deb ...
Unpacking libavahi-client3:armhf (0.7-5) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../019-libkeyutils1_1.6.1-2_armhf.deb ...
Unpacking libkeyutils1:armhf (1.6.1-2) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../020-libkrb5support0_1.17-6+b1_armhf.deb ...
Unpacking libkrb5support0:armhf (1.17-6+b1) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../021-libk5crypto3_1.17-6+b1_armhf.deb ...
Unpacking libk5crypto3:armhf (1.17-6+b1) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../022-libkrb5-3_1.17-6+b1_armhf.deb ...
Unpacking libkrb5-3:armhf (1.17-6+b1) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../023-libgssapi-krb5-2_1.17-6+b1_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.17-6+b1) ...
Selecting previously unselected package libcups2:armhf.
Preparing to unpack .../024-libcups2_2.3.1-7_armhf.deb ...
Unpacking libcups2:armhf (2.3.1-7) ...
Selecting previously unselected package liblcms2-2:armhf.
Preparing to unpack .../025-liblcms2-2_2.9-3_armhf.deb ...
Unpacking liblcms2-2:armhf (2.9-3) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../026-libjpeg62-turbo_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package libpng16-16:armhf.
Preparing to unpack .../027-libpng16-16_1.6.37-2_armhf.deb ...
Unpacking libpng16-16:armhf (1.6.37-2) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../028-libfreetype6_2.10.1-2_armhf.deb ...
Unpacking libfreetype6:armhf (2.10.1-2) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../029-fonts-dejavu-core_2.37-1_all.deb ...
Unpacking fonts-dejavu-core (2.37-1) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../030-fontconfig-config_2.13.1-2_all.deb ...
Unpacking fontconfig-config (2.13.1-2) ...
Selecting previously unselected package libfontconfig1:armhf.
Preparing to unpack .../031-libfontconfig1_2.13.1-2_armhf.deb ...
Unpacking libfontconfig1:armhf (2.13.1-2) ...
Selecting previously unselected package libnspr4:armhf.
Preparing to unpack .../032-libnspr4_2%3a4.24-1_armhf.deb ...
Unpacking libnspr4:armhf (2:4.24-1) ...
Selecting previously unselected package libnss3:armhf.
Preparing to unpack .../033-libnss3_2%3a3.49.1-1_armhf.deb ...
Unpacking libnss3:armhf (2:3.49.1-1) ...
Selecting previously unselected package libasound2-data.
Preparing to unpack .../034-libasound2-data_1.2.1.2-2_all.deb ...
Unpacking libasound2-data (1.2.1.2-2) ...
Selecting previously unselected package libasound2:armhf.
Preparing to unpack .../035-libasound2_1.2.1.2-2_armhf.deb ...
Unpacking libasound2:armhf (1.2.1.2-2) ...
Selecting previously unselected package libpcsclite1:armhf.
Preparing to unpack .../036-libpcsclite1_1.8.26-3_armhf.deb ...
Unpacking libpcsclite1:armhf (1.8.26-3) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../037-libxau6_1%3a1.0.8-1+b2_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.8-1+b2) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../038-libxdmcp6_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../039-libxcb1_1.13.1-5_armhf.deb ...
Unpacking libxcb1:armhf (1.13.1-5) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../040-libx11-data_2%3a1.6.8-1_all.deb ...
Unpacking libx11-data (2:1.6.8-1) ...
Selecting previously unselected package libx11-6:armhf.
Preparing to unpack .../041-libx11-6_2%3a1.6.8-1_armhf.deb ...
Unpacking libx11-6:armhf (2:1.6.8-1) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../042-libxext6_2%3a1.3.3-1+b2_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.3-1+b2) ...
Selecting previously unselected package libxi6:armhf.
Preparing to unpack .../043-libxi6_2%3a1.7.9-1_armhf.deb ...
Unpacking libxi6:armhf (2:1.7.9-1) ...
Selecting previously unselected package libxrender1:armhf.
Preparing to unpack .../044-libxrender1_1%3a0.9.10-1_armhf.deb ...
Unpacking libxrender1:armhf (1:0.9.10-1) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../045-x11-common_1%3a7.7+20_all.deb ...
Unpacking x11-common (1:7.7+20) ...
Selecting previously unselected package libxtst6:armhf.
Preparing to unpack .../046-libxtst6_2%3a1.2.3-1_armhf.deb ...
Unpacking libxtst6:armhf (2:1.2.3-1) ...
Selecting previously unselected package openjdk-11-jre-headless:armhf.
Preparing to unpack .../047-openjdk-11-jre-headless_11.0.6+10-2_armhf.deb ...
Unpacking openjdk-11-jre-headless:armhf (11.0.6+10-2) ...
Selecting previously unselected package default-jre-headless.
Preparing to unpack .../048-default-jre-headless_2%3a1.11-72+b4_armhf.deb ...
Unpacking default-jre-headless (2:1.11-72+b4) ...
Selecting previously unselected package ca-certificates-java.
Preparing to unpack .../049-ca-certificates-java_20190909_all.deb ...
Unpacking ca-certificates-java (20190909) ...
Selecting previously unselected package libtool.
Preparing to unpack .../050-libtool_2.4.6-13_all.deb ...
Unpacking libtool (2.4.6-13) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../051-dh-autoreconf_19_all.deb ...
Unpacking dh-autoreconf (19) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../052-libdebhelper-perl_12.9_all.deb ...
Unpacking libdebhelper-perl (12.9) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../053-libarchive-zip-perl_1.67-1_all.deb ...
Unpacking libarchive-zip-perl (1.67-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../054-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../055-libfile-stripnondeterminism-perl_1.6.3-2_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.6.3-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../056-dh-strip-nondeterminism_1.6.3-2_all.deb ...
Unpacking dh-strip-nondeterminism (1.6.3-2) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../057-libelf1_0.176-1.1_armhf.deb ...
Unpacking libelf1:armhf (0.176-1.1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../058-dwz_0.13-5_armhf.deb ...
Unpacking dwz (0.13-5) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../059-libglib2.0-0_2.62.4-2_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.62.4-2) ...
Selecting previously unselected package libicu63:armhf.
Preparing to unpack .../060-libicu63_63.2-2_armhf.deb ...
Unpacking libicu63:armhf (63.2-2) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../061-libxml2_2.9.4+dfsg1-8_armhf.deb ...
Unpacking libxml2:armhf (2.9.4+dfsg1-8) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../062-libcroco3_0.6.13-1_armhf.deb ...
Unpacking libcroco3:armhf (0.6.13-1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../063-gettext_0.19.8.1-10_armhf.deb ...
Unpacking gettext (0.19.8.1-10) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../064-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../065-po-debconf_1.0.21_all.deb ...
Unpacking po-debconf (1.0.21) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../066-debhelper_12.9_all.deb ...
Unpacking debhelper (12.9) ...
Selecting previously unselected package libglvnd0:armhf.
Preparing to unpack .../067-libglvnd0_1.3.1-1_armhf.deb ...
Unpacking libglvnd0:armhf (1.3.1-1) ...
Selecting previously unselected package libdrm-common.
Preparing to unpack .../068-libdrm-common_2.4.100-4+rpi1_all.deb ...
Unpacking libdrm-common (2.4.100-4+rpi1) ...
Selecting previously unselected package libdrm2:armhf.
Preparing to unpack .../069-libdrm2_2.4.100-4+rpi1_armhf.deb ...
Unpacking libdrm2:armhf (2.4.100-4+rpi1) ...
Selecting previously unselected package libglapi-mesa:armhf.
Preparing to unpack .../070-libglapi-mesa_19.3.3-1_armhf.deb ...
Unpacking libglapi-mesa:armhf (19.3.3-1) ...
Selecting previously unselected package libx11-xcb1:armhf.
Preparing to unpack .../071-libx11-xcb1_2%3a1.6.8-1_armhf.deb ...
Unpacking libx11-xcb1:armhf (2:1.6.8-1) ...
Selecting previously unselected package libxcb-dri2-0:armhf.
Preparing to unpack .../072-libxcb-dri2-0_1.13.1-5_armhf.deb ...
Unpacking libxcb-dri2-0:armhf (1.13.1-5) ...
Selecting previously unselected package libxcb-dri3-0:armhf.
Preparing to unpack .../073-libxcb-dri3-0_1.13.1-5_armhf.deb ...
Unpacking libxcb-dri3-0:armhf (1.13.1-5) ...
Selecting previously unselected package libxcb-glx0:armhf.
Preparing to unpack .../074-libxcb-glx0_1.13.1-5_armhf.deb ...
Unpacking libxcb-glx0:armhf (1.13.1-5) ...
Selecting previously unselected package libxcb-present0:armhf.
Preparing to unpack .../075-libxcb-present0_1.13.1-5_armhf.deb ...
Unpacking libxcb-present0:armhf (1.13.1-5) ...
Selecting previously unselected package libxcb-sync1:armhf.
Preparing to unpack .../076-libxcb-sync1_1.13.1-5_armhf.deb ...
Unpacking libxcb-sync1:armhf (1.13.1-5) ...
Selecting previously unselected package libxfixes3:armhf.
Preparing to unpack .../077-libxfixes3_1%3a5.0.3-1_armhf.deb ...
Unpacking libxfixes3:armhf (1:5.0.3-1) ...
Selecting previously unselected package libxdamage1:armhf.
Preparing to unpack .../078-libxdamage1_1%3a1.1.5-1_armhf.deb ...
Unpacking libxdamage1:armhf (1:1.1.5-1) ...
Selecting previously unselected package libxshmfence1:armhf.
Preparing to unpack .../079-libxshmfence1_1.3-1_armhf.deb ...
Unpacking libxshmfence1:armhf (1.3-1) ...
Selecting previously unselected package libxxf86vm1:armhf.
Preparing to unpack .../080-libxxf86vm1_1%3a1.1.4-1+b2_armhf.deb ...
Unpacking libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Selecting previously unselected package libdrm-amdgpu1:armhf.
Preparing to unpack .../081-libdrm-amdgpu1_2.4.100-4+rpi1_armhf.deb ...
Unpacking libdrm-amdgpu1:armhf (2.4.100-4+rpi1) ...
Selecting previously unselected package libdrm-nouveau2:armhf.
Preparing to unpack .../082-libdrm-nouveau2_2.4.100-4+rpi1_armhf.deb ...
Unpacking libdrm-nouveau2:armhf (2.4.100-4+rpi1) ...
Selecting previously unselected package libdrm-radeon1:armhf.
Preparing to unpack .../083-libdrm-radeon1_2.4.100-4+rpi1_armhf.deb ...
Unpacking libdrm-radeon1:armhf (2.4.100-4+rpi1) ...
Selecting previously unselected package libedit2:armhf.
Preparing to unpack .../084-libedit2_3.1-20191231-1_armhf.deb ...
Unpacking libedit2:armhf (3.1-20191231-1) ...
Selecting previously unselected package libz3-4:armhf.
Preparing to unpack .../085-libz3-4_4.8.7-4_armhf.deb ...
Unpacking libz3-4:armhf (4.8.7-4) ...
Selecting previously unselected package libllvm9:armhf.
Preparing to unpack .../086-libllvm9_1%3a9.0.1-8+rpi1_armhf.deb ...
Unpacking libllvm9:armhf (1:9.0.1-8+rpi1) ...
Selecting previously unselected package libsensors-config.
Preparing to unpack .../087-libsensors-config_1%3a3.6.0-2_all.deb ...
Unpacking libsensors-config (1:3.6.0-2) ...
Selecting previously unselected package libsensors5:armhf.
Preparing to unpack .../088-libsensors5_1%3a3.6.0-2_armhf.deb ...
Unpacking libsensors5:armhf (1:3.6.0-2) ...
Selecting previously unselected package libgl1-mesa-dri:armhf.
Preparing to unpack .../089-libgl1-mesa-dri_19.3.3-1_armhf.deb ...
Unpacking libgl1-mesa-dri:armhf (19.3.3-1) ...
Selecting previously unselected package libglx-mesa0:armhf.
Preparing to unpack .../090-libglx-mesa0_19.3.3-1_armhf.deb ...
Unpacking libglx-mesa0:armhf (19.3.3-1) ...
Selecting previously unselected package libglx0:armhf.
Preparing to unpack .../091-libglx0_1.3.1-1_armhf.deb ...
Unpacking libglx0:armhf (1.3.1-1) ...
Selecting previously unselected package libgl1:armhf.
Preparing to unpack .../092-libgl1_1.3.1-1_armhf.deb ...
Unpacking libgl1:armhf (1.3.1-1) ...
Selecting previously unselected package libgif7:armhf.
Preparing to unpack .../093-libgif7_5.1.9-1_armhf.deb ...
Unpacking libgif7:armhf (5.1.9-1) ...
Selecting previously unselected package openjdk-11-jre:armhf.
Preparing to unpack .../094-openjdk-11-jre_11.0.6+10-2_armhf.deb ...
Unpacking openjdk-11-jre:armhf (11.0.6+10-2) ...
Selecting previously unselected package default-jre.
Preparing to unpack .../095-default-jre_2%3a1.11-72+b4_armhf.deb ...
Unpacking default-jre (2:1.11-72+b4) ...
Selecting previously unselected package openjdk-11-jdk-headless:armhf.
Preparing to unpack .../096-openjdk-11-jdk-headless_11.0.6+10-2_armhf.deb ...
Unpacking openjdk-11-jdk-headless:armhf (11.0.6+10-2) ...
Selecting previously unselected package default-jdk-headless.
Preparing to unpack .../097-default-jdk-headless_2%3a1.11-72+b4_armhf.deb ...
Unpacking default-jdk-headless (2:1.11-72+b4) ...
Selecting previously unselected package openjdk-11-jdk:armhf.
Preparing to unpack .../098-openjdk-11-jdk_11.0.6+10-2_armhf.deb ...
Unpacking openjdk-11-jdk:armhf (11.0.6+10-2) ...
Selecting previously unselected package default-jdk.
Preparing to unpack .../099-default-jdk_2%3a1.11-72+b4_armhf.deb ...
Unpacking default-jdk (2:1.11-72+b4) ...
Selecting previously unselected package fontconfig.
Preparing to unpack .../100-fontconfig_2.13.1-2_armhf.deb ...
Unpacking fontconfig (2.13.1-2) ...
Selecting previously unselected package fonts-lmodern.
Preparing to unpack .../101-fonts-lmodern_2.004.5-6_all.deb ...
Unpacking fonts-lmodern (2.004.5-6) ...
Selecting previously unselected package libgfortran5:armhf.
Preparing to unpack .../102-libgfortran5_9.2.1-25+rpi1_armhf.deb ...
Unpacking libgfortran5:armhf (9.2.1-25+rpi1) ...
Selecting previously unselected package libgfortran-9-dev:armhf.
Preparing to unpack .../103-libgfortran-9-dev_9.2.1-25+rpi1_armhf.deb ...
Unpacking libgfortran-9-dev:armhf (9.2.1-25+rpi1) ...
Selecting previously unselected package gfortran-9.
Preparing to unpack .../104-gfortran-9_9.2.1-25+rpi1_armhf.deb ...
Unpacking gfortran-9 (9.2.1-25+rpi1) ...
Selecting previously unselected package gfortran.
Preparing to unpack .../105-gfortran_4%3a9.2.1-3.1+rpi1_armhf.deb ...
Unpacking gfortran (4:9.2.1-3.1+rpi1) ...
Selecting previously unselected package libgirepository-1.0-1:armhf.
Preparing to unpack .../106-libgirepository-1.0-1_1.62.0-5_armhf.deb ...
Unpacking libgirepository-1.0-1:armhf (1.62.0-5) ...
Selecting previously unselected package gir1.2-glib-2.0:armhf.
Preparing to unpack .../107-gir1.2-glib-2.0_1.62.0-5_armhf.deb ...
Unpacking gir1.2-glib-2.0:armhf (1.62.0-5) ...
Selecting previously unselected package gir1.2-freedesktop:armhf.
Preparing to unpack .../108-gir1.2-freedesktop_1.62.0-5_armhf.deb ...
Unpacking gir1.2-freedesktop:armhf (1.62.0-5) ...
Selecting previously unselected package libgraphite2-3:armhf.
Preparing to unpack .../109-libgraphite2-3_1.3.13-11_armhf.deb ...
Unpacking libgraphite2-3:armhf (1.3.13-11) ...
Selecting previously unselected package libharfbuzz0b:armhf.
Preparing to unpack .../110-libharfbuzz0b_2.6.4-1+rpi1_armhf.deb ...
Unpacking libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Selecting previously unselected package gir1.2-harfbuzz-0.0:armhf.
Preparing to unpack .../111-gir1.2-harfbuzz-0.0_2.6.4-1+rpi1_armhf.deb ...
Unpacking gir1.2-harfbuzz-0.0:armhf (2.6.4-1+rpi1) ...
Selecting previously unselected package libfribidi0:armhf.
Preparing to unpack .../112-libfribidi0_1.0.8-2_armhf.deb ...
Unpacking libfribidi0:armhf (1.0.8-2) ...
Selecting previously unselected package libthai-data.
Preparing to unpack .../113-libthai-data_0.1.28-3_all.deb ...
Unpacking libthai-data (0.1.28-3) ...
Selecting previously unselected package libdatrie1:armhf.
Preparing to unpack .../114-libdatrie1_0.2.12-3+b1_armhf.deb ...
Unpacking libdatrie1:armhf (0.2.12-3+b1) ...
Selecting previously unselected package libthai0:armhf.
Preparing to unpack .../115-libthai0_0.1.28-3_armhf.deb ...
Unpacking libthai0:armhf (0.1.28-3) ...
Selecting previously unselected package libpango-1.0-0:armhf.
Preparing to unpack .../116-libpango-1.0-0_1.42.4-8_armhf.deb ...
Unpacking libpango-1.0-0:armhf (1.42.4-8) ...
Selecting previously unselected package libpixman-1-0:armhf.
Preparing to unpack .../117-libpixman-1-0_0.36.0-1_armhf.deb ...
Unpacking libpixman-1-0:armhf (0.36.0-1) ...
Selecting previously unselected package libxcb-render0:armhf.
Preparing to unpack .../118-libxcb-render0_1.13.1-5_armhf.deb ...
Unpacking libxcb-render0:armhf (1.13.1-5) ...
Selecting previously unselected package libxcb-shm0:armhf.
Preparing to unpack .../119-libxcb-shm0_1.13.1-5_armhf.deb ...
Unpacking libxcb-shm0:armhf (1.13.1-5) ...
Selecting previously unselected package libcairo2:armhf.
Preparing to unpack .../120-libcairo2_1.16.0-4_armhf.deb ...
Unpacking libcairo2:armhf (1.16.0-4) ...
Selecting previously unselected package libpangoft2-1.0-0:armhf.
Preparing to unpack .../121-libpangoft2-1.0-0_1.42.4-8_armhf.deb ...
Unpacking libpangoft2-1.0-0:armhf (1.42.4-8) ...
Selecting previously unselected package libpangocairo-1.0-0:armhf.
Preparing to unpack .../122-libpangocairo-1.0-0_1.42.4-8_armhf.deb ...
Unpacking libpangocairo-1.0-0:armhf (1.42.4-8) ...
Selecting previously unselected package libxft2:armhf.
Preparing to unpack .../123-libxft2_2.3.2-2_armhf.deb ...
Unpacking libxft2:armhf (2.3.2-2) ...
Selecting previously unselected package libpangoxft-1.0-0:armhf.
Preparing to unpack .../124-libpangoxft-1.0-0_1.42.4-8_armhf.deb ...
Unpacking libpangoxft-1.0-0:armhf (1.42.4-8) ...
Selecting previously unselected package gir1.2-pango-1.0:armhf.
Preparing to unpack .../125-gir1.2-pango-1.0_1.42.4-8_armhf.deb ...
Unpacking gir1.2-pango-1.0:armhf (1.42.4-8) ...
Selecting previously unselected package icu-devtools.
Preparing to unpack .../126-icu-devtools_63.2-2_armhf.deb ...
Unpacking icu-devtools (63.2-2) ...
Selecting previously unselected package libapache-pom-java.
Preparing to unpack .../127-libapache-pom-java_18-1_all.deb ...
Unpacking libapache-pom-java (18-1) ...
Selecting previously unselected package libblas3:armhf.
Preparing to unpack .../128-libblas3_3.9.0-1_armhf.deb ...
Unpacking libblas3:armhf (3.9.0-1) ...
Selecting previously unselected package libblas-dev:armhf.
Preparing to unpack .../129-libblas-dev_3.9.0-1_armhf.deb ...
Unpacking libblas-dev:armhf (3.9.0-1) ...
Selecting previously unselected package uuid-dev:armhf.
Preparing to unpack .../130-uuid-dev_2.34-0.1_armhf.deb ...
Unpacking uuid-dev:armhf (2.34-0.1) ...
Selecting previously unselected package libblkid-dev:armhf.
Preparing to unpack .../131-libblkid-dev_2.34-0.1_armhf.deb ...
Unpacking libblkid-dev:armhf (2.34-0.1) ...
Selecting previously unselected package libbrotli1:armhf.
Preparing to unpack .../132-libbrotli1_1.0.7-6_armhf.deb ...
Unpacking libbrotli1:armhf (1.0.7-6) ...
Selecting previously unselected package libbz2-dev:armhf.
Preparing to unpack .../133-libbz2-dev_1.0.8-2_armhf.deb ...
Unpacking libbz2-dev:armhf (1.0.8-2) ...
Selecting previously unselected package libcairo-gobject2:armhf.
Preparing to unpack .../134-libcairo-gobject2_1.16.0-4_armhf.deb ...
Unpacking libcairo-gobject2:armhf (1.16.0-4) ...
Selecting previously unselected package liblzo2-2:armhf.
Preparing to unpack .../135-liblzo2-2_2.10-2_armhf.deb ...
Unpacking liblzo2-2:armhf (2.10-2) ...
Selecting previously unselected package libcairo-script-interpreter2:armhf.
Preparing to unpack .../136-libcairo-script-interpreter2_1.16.0-4_armhf.deb ...
Unpacking libcairo-script-interpreter2:armhf (1.16.0-4) ...
Selecting previously unselected package libexpat1-dev:armhf.
Preparing to unpack .../137-libexpat1-dev_2.2.9-1_armhf.deb ...
Unpacking libexpat1-dev:armhf (2.2.9-1) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../138-zlib1g-dev_1%3a1.2.11.dfsg-1.2_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-1.2) ...
Selecting previously unselected package libpng-dev:armhf.
Preparing to unpack .../139-libpng-dev_1.6.37-2_armhf.deb ...
Unpacking libpng-dev:armhf (1.6.37-2) ...
Selecting previously unselected package libfreetype-dev:armhf.
Preparing to unpack .../140-libfreetype-dev_2.10.1-2_armhf.deb ...
Unpacking libfreetype-dev:armhf (2.10.1-2) ...
Selecting previously unselected package libfreetype6-dev:armhf.
Preparing to unpack .../141-libfreetype6-dev_2.10.1-2_armhf.deb ...
Unpacking libfreetype6-dev:armhf (2.10.1-2) ...
Selecting previously unselected package pkg-config.
Preparing to unpack .../142-pkg-config_0.29-6_armhf.deb ...
Unpacking pkg-config (0.29-6) ...
Selecting previously unselected package libfontconfig1-dev:armhf.
Preparing to unpack .../143-libfontconfig1-dev_2.13.1-2_armhf.deb ...
Unpacking libfontconfig1-dev:armhf (2.13.1-2) ...
Selecting previously unselected package xorg-sgml-doctools.
Preparing to unpack .../144-xorg-sgml-doctools_1%3a1.11-1_all.deb ...
Unpacking xorg-sgml-doctools (1:1.11-1) ...
Selecting previously unselected package x11proto-dev.
Preparing to unpack .../145-x11proto-dev_2018.4-4_all.deb ...
Unpacking x11proto-dev (2018.4-4) ...
Selecting previously unselected package x11proto-core-dev.
Preparing to unpack .../146-x11proto-core-dev_2018.4-4_all.deb ...
Unpacking x11proto-core-dev (2018.4-4) ...
Selecting previously unselected package libxau-dev:armhf.
Preparing to unpack .../147-libxau-dev_1%3a1.0.8-1+b2_armhf.deb ...
Unpacking libxau-dev:armhf (1:1.0.8-1+b2) ...
Selecting previously unselected package libxdmcp-dev:armhf.
Preparing to unpack .../148-libxdmcp-dev_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp-dev:armhf (1:1.1.2-3) ...
Selecting previously unselected package xtrans-dev.
Preparing to unpack .../149-xtrans-dev_1.3.5-1_all.deb ...
Unpacking xtrans-dev (1.3.5-1) ...
Selecting previously unselected package libpthread-stubs0-dev:armhf.
Preparing to unpack .../150-libpthread-stubs0-dev_0.4-1_armhf.deb ...
Unpacking libpthread-stubs0-dev:armhf (0.4-1) ...
Selecting previously unselected package libxcb1-dev:armhf.
Preparing to unpack .../151-libxcb1-dev_1.13.1-5_armhf.deb ...
Unpacking libxcb1-dev:armhf (1.13.1-5) ...
Selecting previously unselected package libx11-dev:armhf.
Preparing to unpack .../152-libx11-dev_2%3a1.6.8-1_armhf.deb ...
Unpacking libx11-dev:armhf (2:1.6.8-1) ...
Selecting previously unselected package libxrender-dev:armhf.
Preparing to unpack .../153-libxrender-dev_1%3a0.9.10-1_armhf.deb ...
Unpacking libxrender-dev:armhf (1:0.9.10-1) ...
Selecting previously unselected package x11proto-xext-dev.
Preparing to unpack .../154-x11proto-xext-dev_2018.4-4_all.deb ...
Unpacking x11proto-xext-dev (2018.4-4) ...
Selecting previously unselected package libxext-dev:armhf.
Preparing to unpack .../155-libxext-dev_2%3a1.3.3-1+b2_armhf.deb ...
Unpacking libxext-dev:armhf (2:1.3.3-1+b2) ...
Selecting previously unselected package libice6:armhf.
Preparing to unpack .../156-libice6_2%3a1.0.9-2_armhf.deb ...
Unpacking libice6:armhf (2:1.0.9-2) ...
Selecting previously unselected package libsm6:armhf.
Preparing to unpack .../157-libsm6_2%3a1.2.3-1_armhf.deb ...
Unpacking libsm6:armhf (2:1.2.3-1) ...
Selecting previously unselected package libice-dev:armhf.
Preparing to unpack .../158-libice-dev_2%3a1.0.9-2_armhf.deb ...
Unpacking libice-dev:armhf (2:1.0.9-2) ...
Selecting previously unselected package libsm-dev:armhf.
Preparing to unpack .../159-libsm-dev_2%3a1.2.3-1_armhf.deb ...
Unpacking libsm-dev:armhf (2:1.2.3-1) ...
Selecting previously unselected package libpixman-1-dev:armhf.
Preparing to unpack .../160-libpixman-1-dev_0.36.0-1_armhf.deb ...
Unpacking libpixman-1-dev:armhf (0.36.0-1) ...
Selecting previously unselected package libxcb-render0-dev:armhf.
Preparing to unpack .../161-libxcb-render0-dev_1.13.1-5_armhf.deb ...
Unpacking libxcb-render0-dev:armhf (1.13.1-5) ...
Selecting previously unselected package libxcb-shm0-dev:armhf.
Preparing to unpack .../162-libxcb-shm0-dev_1.13.1-5_armhf.deb ...
Unpacking libxcb-shm0-dev:armhf (1.13.1-5) ...
Selecting previously unselected package libffi-dev:armhf.
Preparing to unpack .../163-libffi-dev_3.3-3_armhf.deb ...
Unpacking libffi-dev:armhf (3.3-3) ...
Selecting previously unselected package libglib2.0-data.
Preparing to unpack .../164-libglib2.0-data_2.62.4-2_all.deb ...
Unpacking libglib2.0-data (2.62.4-2) ...
Selecting previously unselected package libglib2.0-bin.
Preparing to unpack .../165-libglib2.0-bin_2.62.4-2_armhf.deb ...
Unpacking libglib2.0-bin (2.62.4-2) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../166-python3-lib2to3_3.8.0-1_all.deb ...
Unpacking python3-lib2to3 (3.8.0-1) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../167-python3-distutils_3.8.0-1_all.deb ...
Unpacking python3-distutils (3.8.0-1) ...
Selecting previously unselected package libglib2.0-dev-bin.
Preparing to unpack .../168-libglib2.0-dev-bin_2.62.4-2_armhf.deb ...
Unpacking libglib2.0-dev-bin (2.62.4-2) ...
Selecting previously unselected package libmount-dev:armhf.
Preparing to unpack .../169-libmount-dev_2.34-0.1_armhf.deb ...
Unpacking libmount-dev:armhf (2.34-0.1) ...
Selecting previously unselected package libpcre16-3:armhf.
Preparing to unpack .../170-libpcre16-3_2%3a8.39-12_armhf.deb ...
Unpacking libpcre16-3:armhf (2:8.39-12) ...
Selecting previously unselected package libpcre32-3:armhf.
Preparing to unpack .../171-libpcre32-3_2%3a8.39-12_armhf.deb ...
Unpacking libpcre32-3:armhf (2:8.39-12) ...
Selecting previously unselected package libpcrecpp0v5:armhf.
Preparing to unpack .../172-libpcrecpp0v5_2%3a8.39-12_armhf.deb ...
Unpacking libpcrecpp0v5:armhf (2:8.39-12) ...
Selecting previously unselected package libpcre3-dev:armhf.
Preparing to unpack .../173-libpcre3-dev_2%3a8.39-12_armhf.deb ...
Unpacking libpcre3-dev:armhf (2:8.39-12) ...
Selecting previously unselected package libsepol1-dev:armhf.
Preparing to unpack .../174-libsepol1-dev_3.0-1_armhf.deb ...
Unpacking libsepol1-dev:armhf (3.0-1) ...
Selecting previously unselected package libpcre2-16-0:armhf.
Preparing to unpack .../175-libpcre2-16-0_10.34-7_armhf.deb ...
Unpacking libpcre2-16-0:armhf (10.34-7) ...
Selecting previously unselected package libpcre2-32-0:armhf.
Preparing to unpack .../176-libpcre2-32-0_10.34-7_armhf.deb ...
Unpacking libpcre2-32-0:armhf (10.34-7) ...
Selecting previously unselected package libpcre2-posix2:armhf.
Preparing to unpack .../177-libpcre2-posix2_10.34-7_armhf.deb ...
Unpacking libpcre2-posix2:armhf (10.34-7) ...
Selecting previously unselected package libpcre2-dev:armhf.
Preparing to unpack .../178-libpcre2-dev_10.34-7_armhf.deb ...
Unpacking libpcre2-dev:armhf (10.34-7) ...
Selecting previously unselected package libselinux1-dev:armhf.
Preparing to unpack .../179-libselinux1-dev_3.0-1_armhf.deb ...
Unpacking libselinux1-dev:armhf (3.0-1) ...
Selecting previously unselected package libglib2.0-dev:armhf.
Preparing to unpack .../180-libglib2.0-dev_2.62.4-2_armhf.deb ...
Unpacking libglib2.0-dev:armhf (2.62.4-2) ...
Selecting previously unselected package libcairo2-dev:armhf.
Preparing to unpack .../181-libcairo2-dev_1.16.0-4_armhf.deb ...
Unpacking libcairo2-dev:armhf (1.16.0-4) ...
Selecting previously unselected package libcommons-parent-java.
Preparing to unpack .../182-libcommons-parent-java_43-1_all.deb ...
Unpacking libcommons-parent-java (43-1) ...
Selecting previously unselected package libcommons-logging-java.
Preparing to unpack .../183-libcommons-logging-java_1.2-2_all.deb ...
Unpacking libcommons-logging-java (1.2-2) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../184-libnghttp2-14_1.40.0-1+b2_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.40.0-1+b2) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../185-libpsl5_0.20.2-2_armhf.deb ...
Unpacking libpsl5:armhf (0.20.2-2) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../186-librtmp1_2.4+20151223.gitfa8646d.1-2+b1_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../187-libssh2-1_1.8.0-2.1_armhf.deb ...
Unpacking libssh2-1:armhf (1.8.0-2.1) ...
Selecting previously unselected package libcurl4:armhf.
Preparing to unpack .../188-libcurl4_7.67.0-2_armhf.deb ...
Unpacking libcurl4:armhf (7.67.0-2) ...
Selecting previously unselected package libcurl4-openssl-dev:armhf.
Preparing to unpack .../189-libcurl4-openssl-dev_7.67.0-2_armhf.deb ...
Unpacking libcurl4-openssl-dev:armhf (7.67.0-2) ...
Selecting previously unselected package libfontbox-java.
Preparing to unpack .../190-libfontbox-java_1%3a1.8.16-2_all.deb ...
Unpacking libfontbox-java (1:1.8.16-2) ...
Selecting previously unselected package libfontenc1:armhf.
Preparing to unpack .../191-libfontenc1_1%3a1.1.3-1_armhf.deb ...
Unpacking libfontenc1:armhf (1:1.1.3-1) ...
Selecting previously unselected package libfribidi-dev:armhf.
Preparing to unpack .../192-libfribidi-dev_1.0.8-2_armhf.deb ...
Unpacking libfribidi-dev:armhf (1.0.8-2) ...
Selecting previously unselected package libgraphite2-dev:armhf.
Preparing to unpack .../193-libgraphite2-dev_1.3.13-11_armhf.deb ...
Unpacking libgraphite2-dev:armhf (1.3.13-11) ...
Selecting previously unselected package libharfbuzz-icu0:armhf.
Preparing to unpack .../194-libharfbuzz-icu0_2.6.4-1+rpi1_armhf.deb ...
Unpacking libharfbuzz-icu0:armhf (2.6.4-1+rpi1) ...
Selecting previously unselected package libharfbuzz-gobject0:armhf.
Preparing to unpack .../195-libharfbuzz-gobject0_2.6.4-1+rpi1_armhf.deb ...
Unpacking libharfbuzz-gobject0:armhf (2.6.4-1+rpi1) ...
Selecting previously unselected package libicu-dev:armhf.
Preparing to unpack .../196-libicu-dev_63.2-2_armhf.deb ...
Unpacking libicu-dev:armhf (63.2-2) ...
Selecting previously unselected package libharfbuzz-dev:armhf.
Preparing to unpack .../197-libharfbuzz-dev_2.6.4-1+rpi1_armhf.deb ...
Unpacking libharfbuzz-dev:armhf (2.6.4-1+rpi1) ...
Selecting previously unselected package libjbig0:armhf.
Preparing to unpack .../198-libjbig0_2.1-3.1+b2_armhf.deb ...
Unpacking libjbig0:armhf (2.1-3.1+b2) ...
Selecting previously unselected package libjbig-dev:armhf.
Preparing to unpack .../199-libjbig-dev_2.1-3.1+b2_armhf.deb ...
Unpacking libjbig-dev:armhf (2.1-3.1+b2) ...
Selecting previously unselected package libjpeg62-turbo-dev:armhf.
Preparing to unpack .../200-libjpeg62-turbo-dev_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package libjpeg-dev.
Preparing to unpack .../201-libjpeg-dev_1%3a1.5.2-2_all.deb ...
Unpacking libjpeg-dev (1:1.5.2-2) ...
Selecting previously unselected package libkpathsea6:armhf.
Preparing to unpack .../202-libkpathsea6_2019.20190605.51237-3_armhf.deb ...
Unpacking libkpathsea6:armhf (2019.20190605.51237-3) ...
Selecting previously unselected package liblapack3:armhf.
Preparing to unpack .../203-liblapack3_3.9.0-1_armhf.deb ...
Unpacking liblapack3:armhf (3.9.0-1) ...
Selecting previously unselected package liblapack-dev:armhf.
Preparing to unpack .../204-liblapack-dev_3.9.0-1_armhf.deb ...
Unpacking liblapack-dev:armhf (3.9.0-1) ...
Selecting previously unselected package liblzma-dev:armhf.
Preparing to unpack .../205-liblzma-dev_5.2.4-1_armhf.deb ...
Unpacking liblzma-dev:armhf (5.2.4-1) ...
Selecting previously unselected package libmime-charset-perl.
Preparing to unpack .../206-libmime-charset-perl_1.012.2-1_all.deb ...
Unpacking libmime-charset-perl (1.012.2-1) ...
Selecting previously unselected package libncurses6:armhf.
Preparing to unpack .../207-libncurses6_6.1+20191019-1_armhf.deb ...
Unpacking libncurses6:armhf (6.1+20191019-1) ...
Selecting previously unselected package libncurses-dev:armhf.
Preparing to unpack .../208-libncurses-dev_6.1+20191019-1_armhf.deb ...
Unpacking libncurses-dev:armhf (6.1+20191019-1) ...
Selecting previously unselected package libncurses5-dev:armhf.
Preparing to unpack .../209-libncurses5-dev_6.1+20191019-1_armhf.deb ...
Unpacking libncurses5-dev:armhf (6.1+20191019-1) ...
Selecting previously unselected package libxft-dev:armhf.
Preparing to unpack .../210-libxft-dev_2.3.2-2_armhf.deb ...
Unpacking libxft-dev:armhf (2.3.2-2) ...
Selecting previously unselected package pango1.0-tools.
Preparing to unpack .../211-pango1.0-tools_1.42.4-8_armhf.deb ...
Unpacking pango1.0-tools (1.42.4-8) ...
Selecting previously unselected package libpango1.0-dev:armhf.
Preparing to unpack .../212-libpango1.0-dev_1.42.4-8_armhf.deb ...
Unpacking libpango1.0-dev:armhf (1.42.4-8) ...
Selecting previously unselected package libpaper1:armhf.
Preparing to unpack .../213-libpaper1_1.1.28_armhf.deb ...
Unpacking libpaper1:armhf (1.1.28) ...
Selecting previously unselected package libpaper-utils.
Preparing to unpack .../214-libpaper-utils_1.1.28_armhf.deb ...
Unpacking libpaper-utils (1.1.28) ...
Selecting previously unselected package libpdfbox-java.
Preparing to unpack .../215-libpdfbox-java_1%3a1.8.16-2_all.deb ...
Unpacking libpdfbox-java (1:1.8.16-2) ...
Selecting previously unselected package libptexenc1:armhf.
Preparing to unpack .../216-libptexenc1_2019.20190605.51237-3_armhf.deb ...
Unpacking libptexenc1:armhf (2019.20190605.51237-3) ...
Selecting previously unselected package libreadline-dev:armhf.
Preparing to unpack .../217-libreadline-dev_8.0-3_armhf.deb ...
Unpacking libreadline-dev:armhf (8.0-3) ...
Selecting previously unselected package libsombok3:armhf.
Preparing to unpack .../218-libsombok3_2.4.0-2_armhf.deb ...
Unpacking libsombok3:armhf (2.4.0-2) ...
Selecting previously unselected package libsynctex2:armhf.
Preparing to unpack .../219-libsynctex2_2019.20190605.51237-3_armhf.deb ...
Unpacking libsynctex2:armhf (2019.20190605.51237-3) ...
Selecting previously unselected package libtcl8.6:armhf.
Preparing to unpack .../220-libtcl8.6_8.6.10+dfsg-1_armhf.deb ...
Unpacking libtcl8.6:armhf (8.6.10+dfsg-1) ...
Selecting previously unselected package libteckit0:armhf.
Preparing to unpack .../221-libteckit0_2.5.8+ds2-5_armhf.deb ...
Unpacking libteckit0:armhf (2.5.8+ds2-5) ...
Selecting previously unselected package libtexlua53:armhf.
Preparing to unpack .../222-libtexlua53_2019.20190605.51237-3_armhf.deb ...
Unpacking libtexlua53:armhf (2019.20190605.51237-3) ...
Selecting previously unselected package libtexluajit2:armhf.
Preparing to unpack .../223-libtexluajit2_2019.20190605.51237-3_armhf.deb ...
Unpacking libtexluajit2:armhf (2019.20190605.51237-3) ...
Selecting previously unselected package libtext-unidecode-perl.
Preparing to unpack .../224-libtext-unidecode-perl_1.30-1_all.deb ...
Unpacking libtext-unidecode-perl (1.30-1) ...
Selecting previously unselected package libwebp6:armhf.
Preparing to unpack .../225-libwebp6_0.6.1-2_armhf.deb ...
Unpacking libwebp6:armhf (0.6.1-2) ...
Selecting previously unselected package libtiff5:armhf.
Preparing to unpack .../226-libtiff5_4.1.0+git191117-2_armhf.deb ...
Unpacking libtiff5:armhf (4.1.0+git191117-2) ...
Selecting previously unselected package libtiffxx5:armhf.
Preparing to unpack .../227-libtiffxx5_4.1.0+git191117-2_armhf.deb ...
Unpacking libtiffxx5:armhf (4.1.0+git191117-2) ...
Selecting previously unselected package libtiff-dev:armhf.
Preparing to unpack .../228-libtiff-dev_4.1.0+git191117-2_armhf.deb ...
Unpacking libtiff-dev:armhf (4.1.0+git191117-2) ...
Selecting previously unselected package libtiff5-dev.
Preparing to unpack .../229-libtiff5-dev_4.1.0+git191117-2_armhf.deb ...
Unpacking libtiff5-dev (4.1.0+git191117-2) ...
Selecting previously unselected package libxss1:armhf.
Preparing to unpack .../230-libxss1_1%3a1.2.3-1_armhf.deb ...
Unpacking libxss1:armhf (1:1.2.3-1) ...
Selecting previously unselected package libtk8.6:armhf.
Preparing to unpack .../231-libtk8.6_8.6.10-1_armhf.deb ...
Unpacking libtk8.6:armhf (8.6.10-1) ...
Selecting previously unselected package libunicode-linebreak-perl.
Preparing to unpack .../232-libunicode-linebreak-perl_0.0.20190101-1+b1_armhf.deb ...
Unpacking libunicode-linebreak-perl (0.0.20190101-1+b1) ...
Selecting previously unselected package libunwind8:armhf.
Preparing to unpack .../233-libunwind8_1.2.1-9_armhf.deb ...
Unpacking libunwind8:armhf (1.2.1-9) ...
Selecting previously unselected package libxt6:armhf.
Preparing to unpack .../234-libxt6_1%3a1.1.5-1+b3_armhf.deb ...
Unpacking libxt6:armhf (1:1.1.5-1+b3) ...
Selecting previously unselected package libxmu6:armhf.
Preparing to unpack .../235-libxmu6_2%3a1.1.2-2+b3_armhf.deb ...
Unpacking libxmu6:armhf (2:1.1.2-2+b3) ...
Selecting previously unselected package libxpm4:armhf.
Preparing to unpack .../236-libxpm4_1%3a3.5.12-1_armhf.deb ...
Unpacking libxpm4:armhf (1:3.5.12-1) ...
Selecting previously unselected package libxaw7:armhf.
Preparing to unpack .../237-libxaw7_2%3a1.0.13-1+b2_armhf.deb ...
Unpacking libxaw7:armhf (2:1.0.13-1+b2) ...
Selecting previously unselected package libxfont2:armhf.
Preparing to unpack .../238-libxfont2_1%3a2.0.3-1_armhf.deb ...
Unpacking libxfont2:armhf (1:2.0.3-1) ...
Selecting previously unselected package libxkbfile1:armhf.
Preparing to unpack .../239-libxkbfile1_1%3a1.0.9-2_armhf.deb ...
Unpacking libxkbfile1:armhf (1:1.0.9-2) ...
Selecting previously unselected package libxml-namespacesupport-perl.
Preparing to unpack .../240-libxml-namespacesupport-perl_1.12-1_all.deb ...
Unpacking libxml-namespacesupport-perl (1.12-1) ...
Selecting previously unselected package libxml-sax-base-perl.
Preparing to unpack .../241-libxml-sax-base-perl_1.09-1_all.deb ...
Unpacking libxml-sax-base-perl (1.09-1) ...
Selecting previously unselected package libxml-sax-perl.
Preparing to unpack .../242-libxml-sax-perl_1.02+dfsg-1_all.deb ...
Unpacking libxml-sax-perl (1.02+dfsg-1) ...
Selecting previously unselected package libxml-libxml-perl.
Preparing to unpack .../243-libxml-libxml-perl_2.0134+dfsg-1+b1_armhf.deb ...
Unpacking libxml-libxml-perl (2.0134+dfsg-1+b1) ...
Selecting previously unselected package libxmuu1:armhf.
Preparing to unpack .../244-libxmuu1_2%3a1.1.2-2+b3_armhf.deb ...
Unpacking libxmuu1:armhf (2:1.1.2-2+b3) ...
Selecting previously unselected package x11proto-scrnsaver-dev.
Preparing to unpack .../245-x11proto-scrnsaver-dev_2018.4-4_all.deb ...
Unpacking x11proto-scrnsaver-dev (2018.4-4) ...
Selecting previously unselected package libxss-dev:armhf.
Preparing to unpack .../246-libxss-dev_1%3a1.2.3-1_armhf.deb ...
Unpacking libxss-dev:armhf (1:1.2.3-1) ...
Selecting previously unselected package libxt-dev:armhf.
Preparing to unpack .../247-libxt-dev_1%3a1.1.5-1+b3_armhf.deb ...
Unpacking libxt-dev:armhf (1:1.1.5-1+b3) ...
Selecting previously unselected package libzzip-0-13:armhf.
Preparing to unpack .../248-libzzip-0-13_0.13.62-3.2_armhf.deb ...
Unpacking libzzip-0-13:armhf (0.13.62-3.2) ...
Selecting previously unselected package mpack.
Preparing to unpack .../249-mpack_1.6-8.2_armhf.deb ...
Unpacking mpack (1.6-8.2) ...
Selecting previously unselected package preview-latex-style.
Preparing to unpack .../250-preview-latex-style_11.91-2_all.deb ...
Unpacking preview-latex-style (11.91-2) ...
Selecting previously unselected package t1utils.
Preparing to unpack .../251-t1utils_1.41-3_armhf.deb ...
Unpacking t1utils (1.41-3) ...
Selecting previously unselected package tcl8.6.
Preparing to unpack .../252-tcl8.6_8.6.10+dfsg-1_armhf.deb ...
Unpacking tcl8.6 (8.6.10+dfsg-1) ...
Selecting previously unselected package tcl8.6-dev:armhf.
Preparing to unpack .../253-tcl8.6-dev_8.6.10+dfsg-1_armhf.deb ...
Unpacking tcl8.6-dev:armhf (8.6.10+dfsg-1) ...
Selecting previously unselected package texinfo.
Preparing to unpack .../254-texinfo_6.7.0.dfsg.2-5_armhf.deb ...
Unpacking texinfo (6.7.0.dfsg.2-5) ...
Selecting previously unselected package texlive-binaries.
Preparing to unpack .../255-texlive-binaries_2019.20190605.51237-3_armhf.deb ...
Unpacking texlive-binaries (2019.20190605.51237-3) ...
Selecting previously unselected package xdg-utils.
Preparing to unpack .../256-xdg-utils_1.1.3-1_all.deb ...
Unpacking xdg-utils (1.1.3-1) ...
Selecting previously unselected package texlive-base.
Preparing to unpack .../257-texlive-base_2019.20200218-1_all.deb ...
Unpacking texlive-base (2019.20200218-1) ...
Selecting previously unselected package texlive-latex-base.
Preparing to unpack .../258-texlive-latex-base_2019.20200218-1_all.deb ...
Unpacking texlive-latex-base (2019.20200218-1) ...
Selecting previously unselected package texlive-extra-utils.
Preparing to unpack .../259-texlive-extra-utils_2019.202000218-1_all.deb ...
Unpacking texlive-extra-utils (2019.202000218-1) ...
Selecting previously unselected package texlive-fonts-extra.
Preparing to unpack .../260-texlive-fonts-extra_2019.202000218-1_all.deb ...
Unpacking texlive-fonts-extra (2019.202000218-1) ...
Selecting previously unselected package texlive-fonts-recommended.
Preparing to unpack .../261-texlive-fonts-recommended_2019.20200218-1_all.deb ...
Unpacking texlive-fonts-recommended (2019.20200218-1) ...
Selecting previously unselected package texlive-latex-recommended.
Preparing to unpack .../262-texlive-latex-recommended_2019.20200218-1_all.deb ...
Unpacking texlive-latex-recommended (2019.20200218-1) ...
Selecting previously unselected package texlive-pictures.
Preparing to unpack .../263-texlive-pictures_2019.20200218-1_all.deb ...
Unpacking texlive-pictures (2019.20200218-1) ...
Selecting previously unselected package texlive-latex-extra.
Preparing to unpack .../264-texlive-latex-extra_2019.202000218-1_all.deb ...
Unpacking texlive-latex-extra (2019.202000218-1) ...
Selecting previously unselected package texlive-plain-generic.
Preparing to unpack .../265-texlive-plain-generic_2019.202000218-1_all.deb ...
Unpacking texlive-plain-generic (2019.202000218-1) ...
Selecting previously unselected package tk8.6.
Preparing to unpack .../266-tk8.6_8.6.10-1_armhf.deb ...
Unpacking tk8.6 (8.6.10-1) ...
Selecting previously unselected package tk8.6-dev:armhf.
Preparing to unpack .../267-tk8.6-dev_8.6.10-1_armhf.deb ...
Unpacking tk8.6-dev:armhf (8.6.10-1) ...
Selecting previously unselected package x11-xkb-utils.
Preparing to unpack .../268-x11-xkb-utils_7.7+4_armhf.deb ...
Unpacking x11-xkb-utils (7.7+4) ...
Selecting previously unselected package xauth.
Preparing to unpack .../269-xauth_1%3a1.0.10-1_armhf.deb ...
Unpacking xauth (1:1.0.10-1) ...
Selecting previously unselected package xfonts-encodings.
Preparing to unpack .../270-xfonts-encodings_1%3a1.0.4-2_all.deb ...
Unpacking xfonts-encodings (1:1.0.4-2) ...
Selecting previously unselected package xfonts-utils.
Preparing to unpack .../271-xfonts-utils_1%3a7.7+6_armhf.deb ...
Unpacking xfonts-utils (1:7.7+6) ...
Selecting previously unselected package xfonts-base.
Preparing to unpack .../272-xfonts-base_1%3a1.0.5_all.deb ...
Unpacking xfonts-base (1:1.0.5) ...
Selecting previously unselected package xkb-data.
Preparing to unpack .../273-xkb-data_2.26-2_all.deb ...
Unpacking xkb-data (2.26-2) ...
Selecting previously unselected package xserver-common.
Preparing to unpack .../274-xserver-common_2%3a1.20.7-3_all.deb ...
Unpacking xserver-common (2:1.20.7-3) ...
Selecting previously unselected package xvfb.
Preparing to unpack .../275-xvfb_2%3a1.20.7-3_armhf.deb ...
Unpacking xvfb (2:1.20.7-3) ...
Selecting previously unselected package sbuild-build-depends-r-base-dummy.
Preparing to unpack .../276-sbuild-build-depends-r-base-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-r-base-dummy (0.invalid.0) ...
Setting up libpcrecpp0v5:armhf (2:8.39-12) ...
Setting up libpipeline1:armhf (1.5.2-2) ...
Setting up libgraphite2-3:armhf (1.3.13-11) ...
Setting up liblcms2-2:armhf (2.9-3) ...
Setting up libpixman-1-0:armhf (0.36.0-1) ...
Setting up libx11-xcb1:armhf (2:1.6.8-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up libkeyutils1:armhf (1.6.1-2) ...
Setting up libpsl5:armhf (0.20.2-2) ...
Setting up libpixman-1-dev:armhf (0.36.0-1) ...
Setting up mime-support (3.64) ...
Setting up libpcre16-3:armhf (2:8.39-12) ...
Setting up java-common (0.72) ...
Setting up libdatrie1:armhf (0.2.12-3+b1) ...
Setting up libmagic-mgc (1:5.38-4) ...
Setting up mpack (1.6-8.2) ...
Setting up libtexlua53:armhf (2019.20190605.51237-3) ...
Setting up libarchive-zip-perl (1.67-1) ...
Setting up libglib2.0-0:armhf (2.62.4-2) ...
No schema files found: doing nothing.
Setting up libglvnd0:armhf (1.3.1-1) ...
Setting up libtexluajit2:armhf (2019.20190605.51237-3) ...
Setting up libdebhelper-perl (12.9) ...
Setting up libbrotli1:armhf (1.0.7-6) ...
Setting up libfontbox-java (1:1.8.16-2) ...
Setting up x11-common (1:7.7+20) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libsensors-config (1:3.6.0-2) ...
Setting up libnghttp2-14:armhf (1.40.0-1+b2) ...
Setting up libmagic1:armhf (1:5.38-4) ...
Setting up libsepol1-dev:armhf (3.0-1) ...
Setting up libxml-namespacesupport-perl (1.12-1) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up xkb-data (2.26-2) ...
Setting up liblzo2-2:armhf (2.10-2) ...
Setting up libzzip-0-13:armhf (0.13.62-3.2) ...
Setting up file (1:5.38-4) ...
Setting up libffi-dev:armhf (3.3-3) ...
Setting up libunwind8:armhf (1.2.1-9) ...
Setting up libpthread-stubs0-dev:armhf (0.4-1) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libpcre2-16-0:armhf (10.34-7) ...
Setting up libicu63:armhf (63.2-2) ...
Setting up libkrb5support0:armhf (1.17-6+b1) ...
Setting up libasound2-data (1.2.1.2-2) ...
Setting up libxml-sax-base-perl (1.09-1) ...
Setting up xtrans-dev (1.3.5-1) ...
Setting up libgraphite2-dev:armhf (1.3.13-11) ...
Setting up libfontenc1:armhf (1:1.1.3-1) ...
Setting up autotools-dev (20180224.1) ...
Setting up libz3-4:armhf (4.8.7-4) ...
Setting up libpcre2-32-0:armhf (10.34-7) ...
Setting up libblas3:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libglib2.0-data (2.62.4-2) ...
Setting up libexpat1-dev:armhf (2.2.9-1) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libx11-data (2:1.6.8-1) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up libnspr4:armhf (2:4.24-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Setting up libteckit0:armhf (2.5.8+ds2-5) ...
Setting up bash-completion (1:2.10-1) ...
Setting up uuid-dev:armhf (2.34-0.1) ...
Setting up libapache-pom-java (18-1) ...
Setting up libavahi-common-data:armhf (0.7-5) ...
Setting up libncurses6:armhf (6.1+20191019-1) ...
Setting up libdbus-1-3:armhf (1.12.16-2+b1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up xfonts-encodings (1:1.0.4-2) ...
Setting up libfribidi0:armhf (1.0.8-2) ...
Setting up t1utils (1.41-3) ...
Setting up libpng16-16:armhf (1.6.37-2) ...
Setting up libpcre32-3:armhf (2:8.39-12) ...
Setting up libtcl8.6:armhf (8.6.10+dfsg-1) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up icu-devtools (63.2-2) ...
Setting up pkg-config (0.29-6) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up libpcsclite1:armhf (1.8.26-3) ...
Setting up libpcre2-posix2:armhf (10.34-7) ...
Setting up libsensors5:armhf (1:3.6.0-2) ...
Setting up libk5crypto3:armhf (1.17-6+b1) ...
Setting up libglapi-mesa:armhf (19.3.3-1) ...
Setting up libkpathsea6:armhf (2019.20190605.51237-3) ...
Setting up libgfortran5:armhf (9.2.1-25+rpi1) ...
Setting up liblzma-dev:armhf (5.2.4-1) ...
Setting up libgif7:armhf (5.1.9-1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1.2) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up libxshmfence1:armhf (1.3-1) ...
Setting up libmime-charset-perl (1.012.2-1) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libasound2:armhf (1.2.1.2-2) ...
Setting up fonts-lmodern (2.004.5-6) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libthai-data (0.1.28-3) ...
Setting up libgirepository-1.0-1:armhf (1.62.0-5) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up xorg-sgml-doctools (1:1.11-1) ...
Setting up libkrb5-3:armhf (1.17-6+b1) ...
Setting up libtiff5:armhf (4.1.0+git191117-2) ...
Setting up libmpdec2:armhf (2.4.2-3) ...
Setting up libtext-unidecode-perl (1.30-1) ...
Setting up openssl (1.1.1d-2) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.1+20191019-1) ...
Setting up libdrm-common (2.4.100-4+rpi1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libicu-dev:armhf (63.2-2) ...
Setting up libxml2:armhf (2.9.4+dfsg1-8) ...
Setting up xdg-utils (1.1.3-1) ...
Setting up libblas-dev:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up libsynctex2:armhf (2019.20190605.51237-3) ...
Setting up libtiffxx5:armhf (4.1.0+git191117-2) ...
Setting up libbz2-dev:armhf (1.0.8-2) ...
Setting up x11proto-dev (2018.4-4) ...
Setting up libfile-stripnondeterminism-perl (1.6.3-2) ...
Setting up libblkid-dev:armhf (2.34-0.1) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libpython3.7-stdlib:armhf (3.7.6-1+b1) ...
Setting up tcl8.6 (8.6.10+dfsg-1) ...
Setting up liblapack3:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncurses-dev:armhf (6.1+20191019-1) ...
Setting up libxcb1:armhf (1.13.1-5) ...
Setting up libpdfbox-java (1:1.8.16-2) ...
Setting up libxau-dev:armhf (1:1.0.8-1+b2) ...
Setting up libpcre2-dev:armhf (10.34-7) ...
Setting up libice-dev:armhf (2:1.0.9-2) ...
Setting up libtool (2.4.6-13) ...
Setting up libxcb-render0:armhf (1.13.1-5) ...
Setting up libselinux1-dev:armhf (3.0-1) ...
Setting up libpcre3-dev:armhf (2:8.39-12) ...
Setting up libfribidi-dev:armhf (1.0.8-2) ...
Setting up libxcb-glx0:armhf (1.13.1-5) ...
Setting up tcl8.6-dev:armhf (8.6.10+dfsg-1) ...
Setting up libedit2:armhf (3.1-20191231-1) ...
Setting up libpng-dev:armhf (1.6.37-2) ...
Setting up libcommons-parent-java (43-1) ...
Setting up libavahi-common3:armhf (0.7-5) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up libjbig-dev:armhf (2.1-3.1+b2) ...
Setting up libcommons-logging-java (1.2-2) ...
Setting up libgfortran-9-dev:armhf (9.2.1-25+rpi1) ...
Setting up libglib2.0-bin (2.62.4-2) ...
Setting up m4 (1.4.18-4) ...
Setting up libnss3:armhf (2:3.49.1-1) ...
Setting up libxcb-shm0:armhf (1.13.1-5) ...
Setting up libreadline-dev:armhf (8.0-3) ...
Setting up libxcb-present0:armhf (1.13.1-5) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
128 added, 0 removed; done.
Setting up libxdmcp-dev:armhf (1:1.1.2-3) ...
Setting up libptexenc1:armhf (2019.20190605.51237-3) ...
Setting up libfreetype6:armhf (2.10.1-2) ...
Setting up libtiff-dev:armhf (4.1.0+git191117-2) ...
Setting up libxcb-sync1:armhf (1.13.1-5) ...
Setting up x11proto-core-dev (2018.4-4) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up liblapack-dev:armhf (3.9.0-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-6+b1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up ucf (3.0038+nmu1) ...
Setting up gir1.2-glib-2.0:armhf (1.62.0-5) ...
Setting up autoconf (2.69-11.1) ...
Setting up libxcb-dri2-0:armhf (1.13.1-5) ...
Setting up dh-strip-nondeterminism (1.6.3-2) ...
Setting up x11proto-xext-dev (2018.4-4) ...
Setting up libdrm2:armhf (2.4.100-4+rpi1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-4) ...
Setting up libncurses5-dev:armhf (6.1+20191019-1) ...
Setting up bison (2:3.5.1+dfsg-1) ...
update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
Setting up libcurl4:armhf (7.67.0-2) ...
Setting up libx11-6:armhf (2:1.6.8-1) ...
Setting up libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Setting up libxkbfile1:armhf (1:1.0.9-2) ...
Setting up x11proto-scrnsaver-dev (2018.4-4) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxfont2:armhf (1:2.0.3-1) ...
Setting up libavahi-client3:armhf (0.7-5) ...
Setting up libmount-dev:armhf (2.34-0.1) ...
Setting up libllvm9:armhf (1:9.0.1-8+rpi1) ...
Setting up libxmuu1:armhf (2:1.1.2-2+b3) ...
Setting up libpython3-stdlib:armhf (3.7.5-3) ...
Setting up libdrm-amdgpu1:armhf (2.4.100-4+rpi1) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libxcb-dri3-0:armhf (1.13.1-5) ...
Setting up libpaper1:armhf (1.1.28) ...

Creating config file /etc/papersize with new version
Setting up python3.7 (3.7.6-1+b1) ...
Setting up libdrm-nouveau2:armhf (2.4.100-4+rpi1) ...
Setting up gettext (0.19.8.1-10) ...
Setting up gir1.2-freedesktop:armhf (1.62.0-5) ...
Setting up libharfbuzz-icu0:armhf (2.6.4-1+rpi1) ...
Setting up libxcb1-dev:armhf (1.13.1-5) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up gfortran-9 (9.2.1-25+rpi1) ...
Setting up libsombok3:armhf (2.4.0-2) ...
Setting up libsm-dev:armhf (2:1.2.3-1) ...
Setting up libdrm-radeon1:armhf (2.4.100-4+rpi1) ...
Setting up fontconfig-config (2.13.1-2) ...
Setting up libgl1-mesa-dri:armhf (19.3.3-1) ...
Setting up libx11-dev:armhf (2:1.6.8-1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libtiff5-dev (4.1.0+git191117-2) ...
Setting up python3 (3.7.5-3) ...
Setting up libharfbuzz-gobject0:armhf (2.6.4-1+rpi1) ...
Setting up libpaper-utils (1.1.28) ...
Setting up xfonts-utils (1:7.7+6) ...
Setting up man-db (2.9.0-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libxml-sax-perl (1.02+dfsg-1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...

Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up gir1.2-harfbuzz-0.0:armhf (2.6.4-1+rpi1) ...
Setting up gfortran (4:9.2.1-3.1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up libfreetype-dev:armhf (2.10.1-2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up tex-common (6.13) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up libxcb-shm0-dev:armhf (1.13.1-5) ...
Setting up xfonts-base (1:1.0.5) ...
Setting up libxfixes3:armhf (1:5.0.3-1) ...
Setting up libcurl4-openssl-dev:armhf (7.67.0-2) ...
Setting up libunicode-linebreak-perl (0.0.20190101-1+b1) ...
Setting up libxcb-render0-dev:armhf (1.13.1-5) ...
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up libxext-dev:armhf (2:1.3.3-1+b2) ...
Setting up libxml-libxml-perl (2.0134+dfsg-1+b1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libcups2:armhf (2.3.1-7) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up python3-lib2to3 (3.8.0-1) ...
Setting up libxrender-dev:armhf (1:0.9.10-1) ...
Setting up python3-distutils (3.8.0-1) ...
Setting up libglib2.0-dev-bin (2.62.4-2) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up libxft2:armhf (2.3.2-2) ...
Setting up libxmu6:armhf (2:1.1.2-2+b3) ...
Setting up libxdamage1:armhf (1:1.1.5-1) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up libxtst6:armhf (2:1.2.3-1) ...
Setting up po-debconf (1.0.21) ...
Setting up preview-latex-style (11.91-2) ...
Setting up libtk8.6:armhf (8.6.10-1) ...
Setting up libpango-1.0-0:armhf (1.42.4-8) ...
Setting up libxaw7:armhf (2:1.0.13-1+b2) ...
Setting up libxss-dev:armhf (1:1.2.3-1) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up libfreetype6-dev:armhf (2.10.1-2) ...
Setting up libglib2.0-dev:armhf (2.62.4-2) ...
Setting up libxt-dev:armhf (1:1.1.5-1+b3) ...
Setting up texinfo (6.7.0.dfsg.2-5) ...
Running mktexlsr. This may take some time. ... done.
Setting up texlive-binaries (2019.20190605.51237-3) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libcairo-gobject2:armhf (1.16.0-4) ...
Setting up libpangoft2-1.0-0:armhf (1.42.4-8) ...
Setting up texlive-base (2019.20200218-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
Setting up libpangocairo-1.0-0:armhf (1.42.4-8) ...
Setting up libcairo-script-interpreter2:armhf (1.16.0-4) ...
Setting up tk8.6 (8.6.10-1) ...
Setting up libharfbuzz-dev:armhf (2.6.4-1+rpi1) ...
Setting up libfontconfig1-dev:armhf (2.13.1-2) ...
Setting up libglx-mesa0:armhf (19.3.3-1) ...
Setting up libpangoxft-1.0-0:armhf (1.42.4-8) ...
Setting up libglx0:armhf (1.3.1-1) ...
Setting up x11-xkb-utils (7.7+4) ...
Setting up pango1.0-tools (1.42.4-8) ...
Setting up texlive-plain-generic (2019.202000218-1) ...
Setting up gir1.2-pango-1.0:armhf (1.42.4-8) ...
Setting up libgl1:armhf (1.3.1-1) ...
Setting up texlive-latex-base (2019.20200218-1) ...
Setting up texlive-extra-utils (2019.202000218-1) ...
Setting up texlive-fonts-extra (2019.202000218-1) ...
Setting up texlive-latex-recommended (2019.20200218-1) ...
Setting up texlive-pictures (2019.20200218-1) ...
Setting up texlive-fonts-recommended (2019.20200218-1) ...
Setting up libcairo2-dev:armhf (1.16.0-4) ...
Setting up xserver-common (2:1.20.7-3) ...
Setting up libxft-dev:armhf (2.3.2-2) ...
Setting up xvfb (2:1.20.7-3) ...
Setting up texlive-latex-extra (2019.202000218-1) ...
Setting up libpango1.0-dev:armhf (1.42.4-8) ...
Setting up tk8.6-dev:armhf (8.6.10-1) ...
Setting up default-jre-headless (2:1.11-72+b4) ...
Setting up openjdk-11-jre-headless:armhf (11.0.6+10-2) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up openjdk-11-jre:armhf (11.0.6+10-2) ...
Setting up openjdk-11-jdk-headless:armhf (11.0.6+10-2) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up default-jre (2:1.11-72+b4) ...
Setting up dh-autoreconf (19) ...
Setting up default-jdk-headless (2:1.11-72+b4) ...
Setting up openjdk-11-jdk:armhf (11.0.6+10-2) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
Setting up ca-certificates-java (20190909) ...
head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory
Adding debian:ACCVRAIZ1.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AddTrust_External_Root.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Certigna.pem
Adding debian:Certinomis_-_Root_CA.pem
Adding debian:Certplus_Class_2_Primary_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Chambers_of_Commerce_Root_-_2008.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DST_Root_CA_X3.pem
Adding debian:Deutsche_Telekom_Root_CA_2.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:EC-ACC.pem
Adding debian:EE_Certification_Centre_Root_CA.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:GeoTrust_Global_CA.pem
Adding debian:GeoTrust_Primary_Certification_Authority.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem
Adding debian:GeoTrust_Universal_CA.pem
Adding debian:GeoTrust_Universal_CA_2.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:Global_Chambersign_Root_-_2008.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:LuxTrust_Global_Root_2.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:QuoVadis_Root_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Sonera_Class_2_Root_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:Taiwan_GRCA.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:TrustCor_ECA-1.pem
Adding debian:TrustCor_RootCert_CA-1.pem
Adding debian:TrustCor_RootCert_CA-2.pem
Adding debian:Trustis_FPS_Root_CA.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem
Adding debian:VeriSign_Universal_Root_Certification_Authority.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:thawte_Primary_Root_CA.pem
Adding debian:thawte_Primary_Root_CA_-_G2.pem
Adding debian:thawte_Primary_Root_CA_-_G3.pem
done.
Setting up debhelper (12.9) ...
Setting up default-jdk (2:1.11-72+b4) ...
Setting up sbuild-build-depends-r-base-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.29-9+rpi1) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...

done.
done.
Processing triggers for tex-common (6.13) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.33.90.20200122-2+rpi1 dpkg-dev_1.19.7 g++-9_9.2.1-25+rpi1 gcc-9_9.2.1-25+rpi1 libc6-dev_2.29-9+rpi1 libstdc++-9-dev_9.2.1-25+rpi1 libstdc++6_9.2.1-25+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-5 bash-completion_1:2.10-1 binutils_2.33.90.20200122-2+rpi1 binutils-arm-linux-gnueabihf_2.33.90.20200122-2+rpi1 binutils-common_2.33.90.20200122-2+rpi1 bison_2:3.5.1+dfsg-1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 ca-certificates_20190110 ca-certificates-java_20190909 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.2.1-25+rpi1 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.9 debianutils_4.9.1 default-jdk_2:1.11-72+b4 default-jdk-headless_2:1.11-72+b4 default-jre_2:1.11-72+b4 default-jre-headless_2:1.11-72+b4 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dirmngr_2.2.19-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.5-2 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-6 g++_4:9.2.1-3.1+rpi1 g++-9_9.2.1-25+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-9_9.2.1-25+rpi1 gcc-9-base_9.2.1-25+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:9.2.1-3.1+rpi1 gfortran-9_9.2.1-25+rpi1 gir1.2-freedesktop_1.62.0-5 gir1.2-glib-2.0_1.62.0-5 gir1.2-harfbuzz-0.0_2.6.4-1+rpi1 gir1.2-pango-1.0_1.42.4-8 gnupg_2.2.19-1 gnupg-l10n_2.2.19-1 gnupg-utils_2.2.19-1 gpg_2.2.19-1 gpg-agent_2.2.19-1 gpg-wks-client_2.2.19-1 gpg-wks-server_2.2.19-1 gpgconf_2.2.19-1 gpgsm_2.2.19-1 gpgv_2.2.19-1 grep_3.4-1 groff-base_1.22.4-4 gzip_1.9-3 hostname_3.23 icu-devtools_63.2-2 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 java-common_0.72 libacl1_2.2.53-5 libapache-pom-java_18-1 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-1 libasan5_9.2.1-25+rpi1 libasound2_1.2.1.2-2 libasound2-data_1.2.1.2-2 libassuan0_2.5.3-7 libatomic1_9.2.1-25+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libavahi-client3_0.7-5 libavahi-common-data_0.7-5 libavahi-common3_0.7-5 libbinutils_2.33.90.20200122-2+rpi1 libblas-dev_3.9.0-1 libblas3_3.9.0-1 libblkid-dev_2.34-0.1 libblkid1_2.34-0.1 libbrotli1_1.0.7-6 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libbz2-dev_1.0.8-2 libc-bin_2.29-9+rpi1 libc-dev-bin_2.29-9+rpi1 libc6_2.29-9+rpi1 libc6-dev_2.29-9+rpi1 libcairo-gobject2_1.16.0-4 libcairo-script-interpreter2_1.16.0-4 libcairo2_1.16.0-4 libcairo2-dev_1.16.0-4 libcap-ng0_0.7.9-2.1 libcap2_1:2.27-1 libcap2-bin_1:2.27-1 libcc1-0_9.2.1-25+rpi1 libcom-err2_1.45.5-2 libcommons-logging-java_1.2-2 libcommons-parent-java_43-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.10-10+b5 libcrypt1_1:4.4.10-10+b5 libctf-nobfd0_2.33.90.20200122-2+rpi1 libctf0_2.33.90.20200122-2+rpi1 libcups2_2.3.1-7 libcurl4_7.67.0-2 libcurl4-openssl-dev_7.67.0-2 libdatrie1_0.2.12-3+b1 libdb5.3_5.3.28+dfsg1-0.6 libdbus-1-3_1.12.16-2+b1 libdebconfclient0_0.250 libdebhelper-perl_12.9 libdpkg-perl_1.19.7 libdrm-amdgpu1_2.4.100-4+rpi1 libdrm-common_2.4.100-4+rpi1 libdrm-nouveau2_2.4.100-4+rpi1 libdrm-radeon1_2.4.100-4+rpi1 libdrm2_2.4.100-4+rpi1 libedit2_3.1-20191231-1 libelf1_0.176-1.1 libexpat1_2.2.9-1 libexpat1-dev_2.2.9-1 libext2fs2_1.45.5-2 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi-dev_3.3-3 libffi7_3.3-3 libfile-stripnondeterminism-perl_1.6.3-2 libfontbox-java_1:1.8.16-2 libfontconfig1_2.13.1-2 libfontconfig1-dev_2.13.1-2 libfontenc1_1:1.1.3-1 libfreetype-dev_2.10.1-2 libfreetype6_2.10.1-2 libfreetype6-dev_2.10.1-2 libfribidi-dev_1.0.8-2 libfribidi0_1.0.8-2 libgcc-9-dev_9.2.1-25+rpi1 libgcc1_1:9.2.1-25+rpi1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-9-dev_9.2.1-25+rpi1 libgfortran5_9.2.1-25+rpi1 libgif7_5.1.9-1 libgirepository-1.0-1_1.62.0-5 libgl1_1.3.1-1 libgl1-mesa-dri_19.3.3-1 libglapi-mesa_19.3.3-1 libglib2.0-0_2.62.4-2 libglib2.0-bin_2.62.4-2 libglib2.0-data_2.62.4-2 libglib2.0-dev_2.62.4-2 libglib2.0-dev-bin_2.62.4-2 libglvnd0_1.3.1-1 libglx-mesa0_19.3.3-1 libglx0_1.3.1-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.12-2 libgomp1_9.2.1-25+rpi1 libgpg-error0_1.36-7 libgraphite2-3_1.3.13-11 libgraphite2-dev_1.3.13-11 libgssapi-krb5-2_1.17-6+b1 libharfbuzz-dev_2.6.4-1+rpi1 libharfbuzz-gobject0_2.6.4-1+rpi1 libharfbuzz-icu0_2.6.4-1+rpi1 libharfbuzz0b_2.6.4-1+rpi1 libhogweed5_3.5.1+really3.5.1-2 libice-dev_2:1.0.9-2 libice6_2:1.0.9-2 libicu-dev_63.2-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libisl22_0.22-2 libjbig-dev_2.1-3.1+b2 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libk5crypto3_1.17-6+b1 libkeyutils1_1.6.1-2 libkpathsea6_2019.20190605.51237-3 libkrb5-3_1.17-6+b1 libkrb5support0_1.17-6+b1 libksba8_1.3.5-2 liblapack-dev_3.9.0-1 liblapack3_3.9.0-1 liblcms2-2_2.9-3 libldap-2.4-2_2.4.48+dfsg-1+b2 libldap-common_2.4.48+dfsg-1 libllvm9_1:9.0.1-8+rpi1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 liblzo2-2_2.10-2 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmime-charset-perl_1.012.2-1 libmount-dev_2.34-0.1 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-3 libmpfr6_4.0.2-1 libncurses-dev_6.1+20191019-1 libncurses5-dev_6.1+20191019-1 libncurses6_6.1+20191019-1 libncursesw6_6.1+20191019-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1+b2 libnpth0_1.6-1 libnspr4_2:4.24-1 libnss3_2:3.49.1-1 libp11-kit0_0.23.18.1-2+b1 libpam-cap_1:2.27-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpango-1.0-0_1.42.4-8 libpango1.0-dev_1.42.4-8 libpangocairo-1.0-0_1.42.4-8 libpangoft2-1.0-0_1.42.4-8 libpangoxft-1.0-0_1.42.4-8 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre16-3_2:8.39-12 libpcre2-16-0_10.34-7 libpcre2-32-0_10.34-7 libpcre2-8-0_10.34-7 libpcre2-dev_10.34-7 libpcre2-posix2_10.34-7 libpcre3_2:8.39-12 libpcre3-dev_2:8.39-12 libpcre32-3_2:8.39-12 libpcrecpp0v5_2:8.39-12 libpcsclite1_1.8.26-3 libpdfbox-java_1:1.8.16-2 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libpixman-1-0_0.36.0-1 libpixman-1-dev_0.36.0-1 libpng-dev_1.6.37-2 libpng16-16_1.6.37-2 libpsl5_0.20.2-2 libptexenc1_2019.20190605.51237-3 libpthread-stubs0-dev_0.4-1 libpython3-stdlib_3.7.5-3 libpython3.7-minimal_3.7.6-1+b1 libpython3.7-stdlib_3.7.6-1+b1 libreadline-dev_8.0-3 libreadline7_7.0-5 libreadline8_8.0-3 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.2-2+rpi1 libselinux1_3.0-1 libselinux1-dev_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsensors-config_1:3.6.0-2 libsensors5_1:3.6.0-2 libsepol1_3.0-1 libsepol1-dev_3.0-1 libsigsegv2_2.12-2 libsm-dev_2:1.2.3-1 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1 libsombok3_2.4.0-2 libsqlite3-0_3.31.0+really3.30.1+fossil191229-1 libss2_1.45.5-2 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1d-2 libstdc++-9-dev_9.2.1-25+rpi1 libstdc++6_9.2.1-25+rpi1 libsub-override-perl_0.09-2 libsynctex2_2019.20190605.51237-3 libsystemd0_244.1-1+rpi1 libtasn1-6_4.15.0-2 libtcl8.6_8.6.10+dfsg-1 libteckit0_2.5.8+ds2-5 libtexlua53_2019.20190605.51237-3 libtexluajit2_2019.20190605.51237-3 libtext-unidecode-perl_1.30-1 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff-dev_4.1.0+git191117-2 libtiff5_4.1.0+git191117-2 libtiff5-dev_4.1.0+git191117-2 libtiffxx5_4.1.0+git191117-2 libtinfo5_6.1+20191019-1 libtinfo6_6.1+20191019-1 libtk8.6_8.6.10-1 libtool_2.4.6-13 libubsan1_9.2.1-25+rpi1 libuchardet0_0.0.6-3 libudev1_244.1-1+rpi1 libunicode-linebreak-perl_0.0.20190101-1+b1 libunistring2_0.9.10-2 libunwind8_1.2.1-9 libuuid1_2.34-0.1 libwebp6_0.6.1-2 libx11-6_2:1.6.8-1 libx11-data_2:1.6.8-1 libx11-dev_2:1.6.8-1 libx11-xcb1_2:1.6.8-1 libxau-dev_1:1.0.8-1+b2 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-dri2-0_1.13.1-5 libxcb-dri3-0_1.13.1-5 libxcb-glx0_1.13.1-5 libxcb-present0_1.13.1-5 libxcb-render0_1.13.1-5 libxcb-render0-dev_1.13.1-5 libxcb-shm0_1.13.1-5 libxcb-shm0-dev_1.13.1-5 libxcb-sync1_1.13.1-5 libxcb1_1.13.1-5 libxcb1-dev_1.13.1-5 libxdamage1_1:1.1.5-1 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxext-dev_2:1.3.3-1+b2 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxfont2_1:2.0.3-1 libxft-dev_2.3.2-2 libxft2_2.3.2-2 libxi6_2:1.7.9-1 libxkbfile1_1:1.0.9-2 libxml-libxml-perl_2.0134+dfsg-1+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml2_2.9.4+dfsg1-8 libxmu6_2:1.1.2-2+b3 libxmuu1_2:1.1.2-2+b3 libxpm4_1:3.5.12-1 libxrender-dev_1:0.9.10-1 libxrender1_1:0.9.10-1 libxshmfence1_1.3-1 libxss-dev_1:1.2.3-1 libxss1_1:1.2.3-1 libxt-dev_1:1.1.5-1+b3 libxt6_1:1.1.5-1+b3 libxtst6_2:1.2.3-1 libxxf86vm1_1:1.1.4-1+b2 libz3-4_4.8.7-4 libzstd1_1.4.4+dfsg-1+rpi1 libzzip-0-13_0.13.62-3.2 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8-1 logsave_1.45.5-2 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.4.20200120-1 mime-support_3.64 mount_2.34-0.1 mpack_1.6-8.2 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 netbase_6.0 openjdk-11-jdk_11.0.6+10-2 openjdk-11-jdk-headless_11.0.6+10-2 openjdk-11-jre_11.0.6+10-2 openjdk-11-jre-headless_11.0.6+10-2 openssl_1.1.1d-2 pango1.0-tools_1.42.4-8 passwd_1:4.8-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkg-config_0.29-6 po-debconf_1.0.21 preview-latex-style_11.91-2 python3_3.7.5-3 python3-distutils_3.8.0-1 python3-lib2to3_3.8.0-1 python3-minimal_3.7.5-3 python3.7_3.7.6-1+b1 python3.7-minimal_3.7.6-1+b1 raspbian-archive-keyring_20120528.2 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-base-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-2.1 t1utils_1.41-3 tar_1.30+dfsg-6 tcl8.6_8.6.10+dfsg-1 tcl8.6-dev_8.6.10+dfsg-1 tex-common_6.13 texinfo_6.7.0.dfsg.2-5 texlive-base_2019.20200218-1 texlive-binaries_2019.20190605.51237-3 texlive-extra-utils_2019.202000218-1 texlive-fonts-extra_2019.202000218-1 texlive-fonts-recommended_2019.20200218-1 texlive-latex-base_2019.20200218-1 texlive-latex-extra_2019.202000218-1 texlive-latex-recommended_2019.20200218-1 texlive-pictures_2019.20200218-1 texlive-plain-generic_2019.202000218-1 tk8.6_8.6.10-1 tk8.6-dev_8.6.10-1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 uuid-dev_2.34-0.1 x11-common_1:7.7+20 x11-xkb-utils_7.7+4 x11proto-core-dev_2018.4-4 x11proto-dev_2018.4-4 x11proto-scrnsaver-dev_2018.4-4 x11proto-xext-dev_2018.4-4 xauth_1:1.0.10-1 xdg-utils_1.1.3-1 xfonts-base_1:1.0.5 xfonts-encodings_1:1.0.4-2 xfonts-utils_1:7.7+6 xkb-data_2.26-2 xorg-sgml-doctools_1:1.11-1 xserver-common_2:1.20.7-3 xtrans-dev_1.3.5-1 xvfb_2:1.20.7-3 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1.2 zlib1g-dev_1:1.2.11.dfsg-1.2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Sat Feb 22 13:39:08 2020 UTC
gpgv:                using RSA key A1489FE2AB99A21A
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-base_3.6.2.20200221-1.dsc
dpkg-source: info: extracting r-base in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-base_3.6.2.20200221.orig.tar.gz
dpkg-source: info: unpacking r-base_3.6.2.20200221-1.debian.tar.xz

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-6f4783d1-f608-4bd2-b325-b54bcc321f58
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package r-base
dpkg-buildpackage: info: source version 3.6.2.20200221-1
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
*** clean ***
dh_testdir
dh_testroot
rm -f	configure-stamp \
	build-stamp build-indep-stamp build-arch-stamp \
	make-stamp make-arch-stamp make-indep-stamp \
	install-indep-stamp install-arch-stamp \
	check-stamp
[ ! -f Makefile ] || /usr/bin/make distclean
rm -f `find . -name "*~"`
rm -rf debian/tmp debian/files* core debian/substvars
rm -f doc/html/function.html doc/html/packages.html
rm -f modules/*.so src/unix/Rscript
dh_clean
 debian/rules build-arch
*** configure ***
#automake
#autoconf
dh_testdir
R_SHELL=/bin/bash				\
        mkdir_p="/bin/mkdir -p"                         \
MKDIR_P="/bin/mkdir -p"                         \
R_TEXI2DVICMD=emulation				\
R_PAPERSIZE=letter				\
R_BROWSER=xdg-open				\
R_BZIPCMD=/bin/bzip2				\
R_GZIPCMD="/bin/gzip -n"			\
PAGER=/usr/bin/pager				\
PERL=/usr/bin/perl				\
JAVA_HOME=/usr/lib/jvm/default-java             \
R_UNZIPCMD=/usr/bin/unzip			\
R_ZIPCMD=/usr/bin/zip				\
R_PRINTCMD=/usr/bin/lpr				\
TAR=/bin/tar					\
LIBnn=lib					\
AWK=/usr/bin/awk                                \
DD=/bin/dd					\
GREP=/bin/grep					\
FGREP="/bin/grep -F"				\
EGREP="/bin/grep -E"				\
SED=/bin/sed					\
GETWD="/bin/pwd"				\
CC="gcc -std=gnu99"					\
CXX=g++						\
F77=gfortran					\
FC=gfortran					\
CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g"				\
CXXFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g"				\
FFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong"				\
FCFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong"				\
CPPFLAGS=					\
LDFLAGS="-Wl,-z,relro"				\
FLIBS=						\
rsharedir=/usr/share/R/share			\
rincludedir=/usr/share/R/include		\
rdocdir=/usr/share/R/doc			\
./configure --prefix=/usr			\
	    --with-cairo			\
	    --with-jpeglib			\
	    --with-readline			\
	    --with-tcltk			\
	    --with-system-bzlib			\
	    --with-system-pcre			\
	    --with-system-zlib			\
	    --mandir=/usr/share/man		\
	    --infodir=/usr/share/info		\
	    --datadir=/usr/share/R/share	\
	    --includedir=/usr/share/R/include	\
	    --with-blas		\
	    --with-lapack		\
	    --enable-R-profiling		\
	    --enable-R-shlib			\
	    --enable-memory-profiling		\
	    --without-recommended-packages	\
	    --build arm-linux-gnueabihf
configure: WARNING: unrecognized options: --with-system-bzlib, --with-system-pcre, --with-system-zlib
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking whether ln -s works... yes
checking for ar... ar
checking for a BSD-compatible install... /usr/bin/install -c
checking for sed... /bin/sed
checking for which... /usr/bin/which
checking for /usr/bin/pager... /usr/bin/pager
checking for /bin/tar... /bin/tar
checking for tex... /usr/bin/tex
checking for pdftex... /usr/bin/pdftex
checking for pdflatex... /usr/bin/pdflatex
checking for makeindex... /usr/bin/makeindex
checking for texi2any... /usr/bin/texi2any
checking whether texi2any version is at least 5.1... yes
checking for ginstall-info... no
checking for install-info... no
checking for texi2dvi... /usr/bin/texi2dvi
checking for kpsewhich... /usr/bin/kpsewhich
checking for latex inconsolata package... found zi4.sty
checking for unzip... /usr/bin/unzip
checking for zip... /usr/bin/zip
checking for gzip... /bin/gzip -n
checking for bzip2... /bin/bzip2
using default browser ... xdg-open
checking for acroread... no
checking for acroread4... no
checking for xdg-open... /usr/bin/xdg-open
checking for working aclocal... found
checking for working autoconf... found
checking for working autoheader... found
checking for bison... bison -y
checking for notangle... false
checking for realpath... /usr/bin/realpath
checking for pkg-config... /usr/bin/pkg-config
checking for gcc... gcc -std=gnu99
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc -std=gnu99 accepts -g... yes
checking for gcc -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -std=gnu99 -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking whether gcc -std=gnu99 needs -traditional... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking how to run the C preprocessor... gcc -std=gnu99 -E
looking for a modern Fortran compiler
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking whether g++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g can compile C++ code... yes
checking how to run the C++ preprocessor... g++ -E
checking whether __attribute__((visibility())) is supported... yes
checking whether gcc -std=gnu99 accepts -fvisibility... yes
checking whether g++ accepts -fvisibility... yes
checking whether gfortran accepts -fvisibility... yes
checking for gcc... gcc
checking whether we are using the GNU Objective C compiler... no
checking whether gcc accepts -g... no
checking whether g++ can compile ObjC++... no
checking whether  can compile ObjC++... no
checking for Objective C++ compiler... no working ObjC++ compiler found
checking how to print strings... printf
checking for a sed that does not truncate output... (cached) /bin/sed
checking for fgrep... /bin/grep -F
checking for ld used by gcc -std=gnu99... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking for gawk... /usr/bin/awk
checking command to parse /usr/bin/nm -B output from gcc -std=gnu99 object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc -std=gnu99 supports -fno-rtti -fno-exceptions... no
checking for gcc -std=gnu99 option to produce PIC... -fPIC -DPIC
checking if gcc -std=gnu99 PIC flag -fPIC -DPIC works... yes
checking if gcc -std=gnu99 static flag -static works... yes
checking if gcc -std=gnu99 supports -c -o file.o... yes
checking if gcc -std=gnu99 supports -c -o file.o... (cached) yes
checking whether the gcc -std=gnu99 linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for cos in -lm... yes
checking for sin in -lm... yes
checking for dlopen in -ldl... yes
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for rl_callback_read_char in -lreadline... yes
checking for history_truncate_file... yes
checking for tilde_expand_word... yes
checking whether rl_callback_sigcleanup exists and is declared... yes
checking whether rl_completion_matches exists and is declared... yes
checking whether rl_resize_terminal exists and is declared... yes
checking whether rl_sort_completion_matches exists and is declared... yes
checking for ANSI C header files... (cached) yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking for dlfcn.h... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking glob.h usability... yes
checking glob.h presence... yes
checking for glob.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for strings.h... (cached) yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for unistd.h... (cached) yes
checking utime.h usability... yes
checking utime.h presence... yes
checking for utime.h... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking elf.h usability... yes
checking elf.h presence... yes
checking for elf.h... yes
checking features.h usability... yes
checking features.h presence... yes
checking for features.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking langinfo.h usability... yes
checking langinfo.h presence... yes
checking for langinfo.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking stdalign.h usability... yes
checking stdalign.h presence... yes
checking for stdalign.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking for stdint.h... (cached) yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking for GNU C library with version >= 2... yes
checking return type of signal handlers... void
checking for uint64_t... yes
checking for int64_t... yes
checking for int_fast64_t... yes
checking for pid_t... yes
checking for size_t... yes
checking whether SIZE_MAX is declared... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking for stack_t... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for gcc -std=gnu99 option to accept ISO C99... none needed
checking for gcc -std=gnu99 option to accept ISO Standard C... (cached) none needed
checking for inline... inline
checking size of int... 4
checking size of long... 4
checking size of long long... 8
checking size of double... 8
checking size of size_t... 4
checking for C stack direction... down
checking size of long double... 8
checking whether we can compute C Make dependencies... yes, using $(CC) -MM
checking whether gcc -std=gnu99 supports -c -o FILE.lo... yes
checking for gcc -std=gnu99 option to support OpenMP... -fopenmp
checking how to get verbose linking output from gfortran... -v
checking for Fortran libraries of gfortran...  -L/usr/lib/gcc/arm-linux-gnueabihf/9 -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm
checking how to get verbose linking output from gcc -std=gnu99... -v
checking for C libraries of gcc -std=gnu99...  -L/usr/lib/gcc/arm-linux-gnueabihf/9 -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgcc_s
checking for dummy main to link with Fortran libraries... none
checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore
checking whether gfortran appends underscores to external names... yes
checking whether gfortran appends extra underscores to external names... no
checking whether mixed C/Fortran code can be run... yes
checking whether gfortran and gcc -std=gnu99 agree on int and double... yes
checking whether gfortran and gcc -std=gnu99 agree on double complex... yes
checking for gfortran option to support OpenMP... -fopenmp
checking whether g++ accepts -M for generating dependencies... yes
checking whether we can compute ObjC Make dependencies... no
./configure: line 20284: ::: command not found
checking if need -fno-optimize-sibling-calls for gfortran... yes
checking for type of 'hidden' Fortran character lengths... size_t
checking for xmkmf... no
checking whether g++  supports C++98 features with -std=gnu++98... yes
checking whether g++  supports C++11 features with -std=gnu++11... yes
checking whether g++  supports C++14 features with -std=gnu++14... yes
checking whether g++  supports C++17 features with -std=gnu++17... yes
checking for g++ -std=gnu++11 option to support OpenMP... -fopenmp
checking for option providing pthread_kill... none required
checking whether POSIX threads are supported... yes
checking for off_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking whether alloca is declared... yes
checking whether expm1 exists and is declared... yes
checking whether hypot exists and is declared... yes
checking whether log1p exists and is declared... yes
checking whether log1pl exists and is declared... yes
checking whether log2 exists and is declared... yes
checking whether log10 exists and is declared... yes
checking whether nearbyint exists and is declared... yes
checking whether nearbyintl exists and is declared... yes
checking whether powl exists and is declared... yes
checking whether rintl exists and is declared... yes
checking whether va_copy exists and is declared... yes
checking for isblank... yes
checking sunmath.h usability... no
checking sunmath.h presence... no
checking for sunmath.h... no
checking for cospi in -lsunmath... no
checking for atanpi... no
checking for atan2pi... no
checking for cospi... no
checking for exp10... yes
checking for pown... no
checking for sinpi... no
checking for tanpi... no
checking for __cospi... no
checking for __sinpi... no
checking for __tanpi... no
checking for fseeko... yes
checking for ftello... yes
checking for matherr... no
checking whether fcntl exists and is declared... yes
checking whether getgrgid exists and is declared... yes
checking whether getpwuid exists and is declared... yes
checking whether kill exists and is declared... yes
checking whether sigaction exists and is declared... yes
checking whether sigaltstack exists and is declared... yes
checking whether sigemptyset exists and is declared... yes
checking whether fdopen exists and is declared... yes
checking whether popen exists and is declared... yes
checking whether getline exists and is declared... yes
checking whether select exists and is declared... yes
checking whether setenv exists and is declared... yes
checking whether unsetenv exists and is declared... yes
checking whether getrlimit exists and is declared... yes
checking whether setrlimit exists and is declared... yes
checking whether getrusage exists and is declared... yes
checking whether getpriority exists and is declared... yes
checking whether chmod exists and is declared... yes
checking whether mkfifo exists and is declared... yes
checking whether stat exists and is declared... yes
checking whether umask exists and is declared... yes
checking whether gettimeofday exists and is declared... yes
checking whether utimes exists and is declared... yes
checking whether times exists and is declared... yes
checking whether gmtime_r exists and is declared... yes
checking whether localtime_r exists and is declared... yes
checking whether nl_langinfo exists and is declared... yes
checking whether access exists and is declared... yes
checking whether chdir exists and is declared... yes
checking whether execv exists and is declared... yes
checking whether ftruncate exists and is declared... yes
checking whether getcwd exists and is declared... yes
checking whether geteuid exists and is declared... yes
checking whether getuid exists and is declared... yes
checking whether link exists and is declared... yes
checking whether readlink exists and is declared... yes
checking whether symlink exists and is declared... yes
checking whether sysconf exists and is declared... yes
checking whether sched_setaffinity exists and is declared... yes
checking whether sched_getaffinity exists and is declared... yes
checking whether utime exists and is declared... yes
checking whether utimensat exists and is declared... yes
checking for clock_gettime in -lrt... yes
checking whether clock_gettime exists and is declared... yes
checking whether timespec_get exists and is declared... yes
checking for putenv... yes
checking whether putenv is declared... yes
checking for vasprintf... yes
checking whether vasprintf is declared... yes
checking for mempcpy... yes
checking for realpath... yes
checking whether realpath is declared... yes
checking whether glob exists and is declared... yes
checking for dladdr... yes
checking for dlsym... yes
checking whether dladdr is declared... yes
checking whether dlsym is declared... yes
checking whether RTLD_DEFAULT is declared... yes
checking whether RTLD_NEXT is declared... yes
checking thread.h usability... no
checking thread.h presence... no
checking for thread.h... no
checking whether thr_stksegment exists and is declared... no
checking for isnan... yes
checking whether isfinite is declared... yes
checking whether isnan is declared... yes
checking whether you have IEEE 754 floating-point arithmetic... yes
checking whether putenv("FOO") can unset an environment variable... yes
checking whether putenv("FOO=") can unset an environment variable... no
checking for nl_langinfo and CODESET... yes
checking for mkdtemp... yes
checking for strdup... yes
checking for strncasecmp... yes
checking whether mkdtemp is declared... yes
checking whether strdup is declared... yes
checking whether strncasecmp is declared... yes
checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for working calloc... yes
checking for working isfinite... yes
checking for working log1p... yes
checking whether ftell works correctly on files opened for append... yes
checking for working sigaction... yes
checking whether mktime sets errno... yes
checking whether mktime works correctly outside 1902-2037... no
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking for double complex... yes
checking whether C99 double complex is supported... yes
checking whether cabs exists and is declared... yes
checking whether carg exists and is declared... yes
checking whether cexp exists and is declared... yes
checking whether clog exists and is declared... yes
checking whether csqrt exists and is declared... yes
checking whether cpow exists and is declared... yes
checking whether ccos exists and is declared... yes
checking whether csin exists and is declared... yes
checking whether ctan exists and is declared... yes
checking whether cacos exists and is declared... yes
checking whether casin exists and is declared... yes
checking whether catan exists and is declared... yes
checking whether ccosh exists and is declared... yes
checking whether csinh exists and is declared... yes
checking whether ctanh exists and is declared... yes
checking for working ctanh... yes
checking whether 'struct tm' includes tm_zone... yes
checking whether 'struct tm' includes tm_gmtoff... yes
checking for dgemm_... no
checking for sgemm_ in -lopenblas... no
checking for ATL_xerbla in -latlas... no
checking for dgemm_ in -lblas... yes
checking for dgemm_ in -ldgemm... no
checking for dgemm_ in -lblas... (cached) yes
checking for dgemm_ in -lessl... no
checking for dgemm_ in -lblas... (cached) yes
checking whether double complex BLAS can be used... yes
checking whether the BLAS is complete... yes
checking for dpstrf_... no
checking for dpstrf_ in -llapack... yes
checking iconv.h usability... yes
checking iconv.h presence... yes
checking for iconv.h... yes
checking for iconv... yes
checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes
checking whether iconv accepts "CP1252"... yes
checking for iconvlist... no
checking for iconv... yes
checking for iconv declaration... 
         extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking wchar.h usability... yes
checking wchar.h presence... yes
checking for wchar.h... yes
checking wctype.h usability... yes
checking wctype.h presence... yes
checking for wctype.h... yes
checking whether mbrtowc exists and is declared... yes
checking whether wcrtomb exists and is declared... yes
checking whether wcscoll exists and is declared... yes
checking whether wcsftime exists and is declared... yes
checking whether wcstod exists and is declared... yes
checking whether mbstowcs exists and is declared... yes
checking whether wcstombs exists and is declared... yes
checking whether wctrans exists and is declared... yes
checking whether iswblank exists and is declared... yes
checking whether wctype exists and is declared... yes
checking whether iswctype exists and is declared... yes
checking for wctrans_t... yes
checking for mbstate_t... yes
checking for ICU... yes
checking for X... libraries , headers 
checking for gethostbyname... yes
checking for connect... yes
checking for remove... yes
checking for shmat... yes
checking for IceConnectionNumber in -lICE... yes
checking X11/Intrinsic.h usability... yes
checking X11/Intrinsic.h presence... yes
checking for X11/Intrinsic.h... yes
checking for XtToolkitInitialize in -lXt... yes
using X11 ... yes
checking for KeySym... yes
checking X11/Xmu/Atoms.h usability... no
checking X11/Xmu/Atoms.h presence... no
checking for X11/Xmu/Atoms.h... no
checking whether pkg-config knows about cairo and pango... yes
checking whether cairo including pango is >= 1.2 and works... yes
checking for tclConfig.sh... no
checking for tclConfig.sh in library (sub)directories... /usr/lib/tcl8.6/tclConfig.sh
checking for tkConfig.sh... no
checking for tkConfig.sh in library (sub)directories... /usr/lib/tk8.6/tkConfig.sh
checking tcl.h usability... yes
checking tcl.h presence... yes
checking for tcl.h... yes
checking tk.h usability... yes
checking tk.h presence... yes
checking for tk.h... yes
checking whether compiling/linking Tcl/Tk code works... yes
checking for BSD networking... yes
checking rpc/types.h usability... yes
checking rpc/types.h presence... yes
checking for rpc/types.h... yes
checking for rpc/xdr.h... yes
checking for XDR support... yes
checking for inflateInit2_ in -lz... yes
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking if zlib version >= 1.2.5... yes
checking whether zlib support suffices... yes
checking mmap support for zlib... yes
checking for BZ2_bzlibVersion in -lbz2... yes
checking bzlib.h usability... yes
checking bzlib.h presence... yes
checking for bzlib.h... yes
checking if bzip2 version >= 1.0.6... yes
checking whether bzip2 support suffices... yes
checking for lzma_version_number in -llzma... yes
checking lzma.h usability... yes
checking lzma.h presence... yes
checking for lzma.h... yes
checking if lzma version >= 5.0.3... yes
checking for pcre_fullinfo in -lpcre... yes
checking pcre.h usability... yes
checking pcre.h presence... yes
checking for pcre.h... yes
checking pcre/pcre.h usability... no
checking pcre/pcre.h presence... no
checking for pcre/pcre.h... no
checking if PCRE version >= 8.20, < 10.0 and has UTF-8 support... yes
checking if PCRE version >= 8.32... yes
checking whether PCRE support suffices... yes
checking pcre2.h usability... yes
checking pcre2.h presence... yes
checking for pcre2.h... yes
checking for pcre2_compile_8 in -lpcre2-8... yes
checking for curl-config... /usr/bin/curl-config
checking libcurl version ... 7.67.0
checking curl/curl.h usability... yes
checking curl/curl.h presence... yes
checking for curl/curl.h... yes
checking if libcurl is version 7 and >= 7.22.0... yes
checking if libcurl supports https... yes
checking if jpeglib version >= 6b... yes
checking for jpeg_destroy_compress in -ljpeg... yes
checking if libpng version >= 1.2.7... yes
checking for png_create_write_struct in -lpng... yes
checking tiffio.h usability... yes
checking tiffio.h presence... yes
checking for tiffio.h... yes
checking for TIFFOpen in -ltiff... yes
checking whether leap seconds are treated according to POSIX... yes
checking for inline... inline
checking for sys/time.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for struct stat.st_atim.tv_nsec... yes
checking whether struct stat.st_atim is of type struct timespec... yes
checking for setitimer... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... 64
checking for _LARGEFILE_SOURCE value needed for large files... no
checking whether KERN_USRSTACK sysctl is supported... no
checking for visible __lib_stack_end... yes
checking for paperconf... /usr/bin/paperconf
checking for Fortran flag to compile .f90 files... none
checking for Fortran flag to compile .f95 files... none
checking for gfortran option to support OpenMP... (cached) -fopenmp
checking whether NLS is requested... yes

Configuring src/extra/intl directory
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking whether we are using the GNU C Library 2 or newer... yes
checking for ranlib... (cached) ranlib
checking for simple visibility declarations... yes
checking for stdint.h... yes
checking for getpagesize... yes
checking for working mmap... yes
checking whether integer division by zero raises SIGFPE... yes
checking for inttypes.h... yes
checking for unsigned long long int... yes
checking for inttypes.h... (cached) yes
checking whether the inttypes.h PRIxNN macros are broken... no
checking for ld used by gcc -std=gnu99... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for shared library run path origin... done
checking whether imported symbols can be declared weak... yes
checking for multithread API to use... none
checking argz.h usability... yes
checking argz.h presence... yes
checking for argz.h... yes
checking for inttypes.h... (cached) yes
checking for limits.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for getcwd... yes
checking for getegid... yes
checking for geteuid... yes
checking for getgid... yes
checking for getuid... yes
checking for mempcpy... (cached) yes
checking for munmap... yes
checking for stpcpy... yes
checking for strcasecmp... yes
checking for strdup... (cached) yes
checking for strtoul... yes
checking for tsearch... yes
checking for argz_count... yes
checking for argz_stringify... yes
checking for argz_next... yes
checking for __fsetlocking... yes
checking whether feof_unlocked is declared... yes
checking whether fgets_unlocked is declared... yes
checking for iconv... (cached) yes
checking for iconv declaration... (cached) 
         extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for NL_LOCALE_NAME macro... yes
checking for bison... bison
checking version of bison... 3.5.1, ok
checking for long long int... yes
checking for long double... yes
checking for wchar_t... yes
checking for wint_t... yes
checking for intmax_t... yes
checking whether printf() supports POSIX/XSI format strings... yes
checking whether we are using the GNU C Library 2.1 or newer... yes
checking for stdint.h... (cached) yes
checking for SIZE_MAX... yes
checking for stdint.h... (cached) yes
checking for CFPreferencesCopyAppValue... no
checking for CFLocaleCopyCurrent... no
checking for ptrdiff_t... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for asprintf... yes
checking for fwprintf... yes
checking for putenv... (cached) yes
checking for setenv... yes
checking for setlocale... yes
checking for snprintf... yes
checking for wcslen... yes
checking whether _snprintf is declared... no
checking whether _snwprintf is declared... no
checking whether getc_unlocked is declared... yes
checking for nl_langinfo and CODESET... (cached) yes
checking for LC_MESSAGES... yes
checking for CFPreferencesCopyAppValue... (cached) no
checking for CFLocaleCopyCurrent... (cached) no
checking whether included gettext is requested... no
checking for GNU gettext in libc... yes
checking whether to use NLS... yes
checking where the gettext function comes from... libc
Finished configuring src/extra/intl directory

checking whether OpenMP SIMD reduction is supported... yes
using as R_SHELL for scripts ... /bin/bash
configure: creating ./config.status
config.status: creating Makeconf
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating doc/html/Makefile
config.status: creating doc/manual/Makefile
config.status: creating etc/Makefile
config.status: creating etc/Makeconf
config.status: creating etc/Renviron
config.status: creating etc/javaconf
config.status: creating etc/ldpaths
config.status: creating m4/Makefile
config.status: creating po/Makefile
config.status: creating share/Makefile
config.status: creating src/Makefile
config.status: creating src/appl/Makefile
config.status: creating src/extra/Makefile
config.status: creating src/extra/blas/Makefile
config.status: creating src/extra/intl/Makefile
config.status: creating src/extra/tre/Makefile
config.status: creating src/extra/tzone/Makefile
config.status: creating src/extra/xdr/Makefile
config.status: creating src/include/Makefile
config.status: creating src/include/Rmath.h0
config.status: creating src/include/R_ext/Makefile
config.status: creating src/library/Recommended/Makefile
config.status: creating src/library/Makefile
config.status: creating src/library/base/DESCRIPTION
config.status: creating src/library/base/Makefile
config.status: creating src/library/compiler/DESCRIPTION
config.status: creating src/library/compiler/Makefile
config.status: creating src/library/datasets/DESCRIPTION
config.status: creating src/library/datasets/Makefile
config.status: creating src/library/graphics/DESCRIPTION
config.status: creating src/library/graphics/Makefile
config.status: creating src/library/graphics/src/Makefile
config.status: creating src/library/grDevices/DESCRIPTION
config.status: creating src/library/grDevices/Makefile
config.status: creating src/library/grDevices/src/Makefile
config.status: creating src/library/grDevices/src/cairo/Makefile
config.status: creating src/library/grid/DESCRIPTION
config.status: creating src/library/grid/Makefile
config.status: creating src/library/grid/src/Makefile
config.status: creating src/library/methods/DESCRIPTION
config.status: creating src/library/methods/Makefile
config.status: creating src/library/methods/src/Makefile
config.status: creating src/library/parallel/DESCRIPTION
config.status: creating src/library/parallel/Makefile
config.status: creating src/library/parallel/src/Makefile
config.status: creating src/library/profile/Makefile
config.status: creating src/library/stats/DESCRIPTION
config.status: creating src/library/stats/Makefile
config.status: creating src/library/stats/src/Makefile
config.status: creating src/library/stats4/DESCRIPTION
config.status: creating src/library/stats4/Makefile
config.status: creating src/library/splines/DESCRIPTION
config.status: creating src/library/splines/Makefile
config.status: creating src/library/splines/src/Makefile
config.status: creating src/library/tcltk/DESCRIPTION
config.status: creating src/library/tcltk/Makefile
config.status: creating src/library/tcltk/src/Makefile
config.status: creating src/library/tools/DESCRIPTION
config.status: creating src/library/tools/Makefile
config.status: creating src/library/tools/src/Makefile
config.status: creating src/library/translations/DESCRIPTION
config.status: creating src/library/translations/Makefile
config.status: creating src/library/utils/DESCRIPTION
config.status: creating src/library/utils/Makefile
config.status: creating src/library/utils/src/Makefile
config.status: creating src/main/Makefile
config.status: creating src/modules/Makefile
config.status: creating src/modules/X11/Makefile
config.status: creating src/modules/internet/Makefile
config.status: creating src/modules/lapack/Makefile
config.status: creating src/nmath/Makefile
config.status: creating src/nmath/standalone/Makefile
config.status: creating src/scripts/Makefile
config.status: creating src/scripts/R.sh
config.status: creating src/scripts/Rcmd
config.status: creating src/scripts/javareconf
config.status: creating src/scripts/mkinstalldirs
config.status: creating src/scripts/pager
config.status: creating src/scripts/rtags
config.status: creating src/unix/Makefile
config.status: creating tests/Makefile
config.status: creating tests/Embedding/Makefile
config.status: creating tests/Examples/Makefile
config.status: creating tools/Makefile
config.status: creating src/include/config.h
config.status: executing libtool commands
config.status: executing stamp-h commands
configure: WARNING: unrecognized options: --with-system-bzlib, --with-system-pcre, --with-system-zlib

R is now configured for arm-unknown-linux-gnueabihf

  Source directory:            .
  Installation directory:      /usr

  C compiler:                  gcc -std=gnu99  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
  Fortran fixed-form compiler: gfortran -fno-optimize-sibling-calls -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong

  Default C++ compiler:        g++ -std=gnu++11  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
  C++98 compiler:              g++ -std=gnu++98  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
  C++11 compiler:              g++ -std=gnu++11  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
  C++14 compiler:              g++ -std=gnu++14  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
  C++17 compiler:              g++ -std=gnu++17  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g
  Fortran free-form compiler:  gfortran -fno-optimize-sibling-calls -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
  Obj-C compiler:	        

  Interfaces supported:        X11, tcltk
  External libraries:          readline, BLAS(generic), LAPACK(generic), curl
  Additional capabilities:     PNG, JPEG, TIFF, NLS, cairo, ICU
  Options enabled:             shared R library, R profiling, memory profiling

  Capabilities skipped:        
  Options not enabled:         shared BLAS

  Recommended packages:        no

touch configure-stamp
*** make-arch ***
/usr/bin/make		CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g"			\
		CXXFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g"			\
		FFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong"			\
		FCFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong"			\
		CC="gcc -std=gnu99"				\
		CXX=g++			\
		F77=gfortran			\
		LDFLAGS="-Wl,-z,relro"			\
		PKG_BUILT_STAMP=""""	\
		R_GZIPCMD="/bin/gzip -n"		\
		R
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/m4'
make[2]: Nothing to be done for 'R'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/m4'
make[2]: Entering directory '/<<PKGBUILDDIR>>/tools'
make[2]: Nothing to be done for 'R'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/tools'
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc/html'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc/html'
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc/manual'
make[3]: Nothing to be done for 'R'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc/manual'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/etc'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/etc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/share'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/share'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/scripts'
creating src/scripts/R.fe
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/scripts'
mkdir -p -- ../../bin
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/scripts'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/scripts'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/include'
mkdir -p -- ../../include
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/include/R_ext'
mkdir -p -- ../../../include/R_ext
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/include/R_ext'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/include'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/extra'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/extra/tre'
making regcomp.d from regcomp.c
making regerror.d from regerror.c
making regexec.d from regexec.c
making tre-ast.d from tre-ast.c
making tre-compile.d from tre-compile.c
making tre-match-approx.d from tre-match-approx.c
making tre-match-backtrack.d from tre-match-backtrack.c
making tre-match-parallel.d from tre-match-parallel.c
making tre-mem.d from tre-mem.c
making tre-parse.d from tre-parse.c
making tre-stack.d from tre-stack.c
making xmalloc.d from xmalloc.c
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/extra/tre'
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c regcomp.c -o regcomp.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c regerror.c -o regerror.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c regexec.c -o regexec.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c tre-ast.c -o tre-ast.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c tre-compile.c -o tre-compile.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c tre-mem.c -o tre-mem.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c tre-parse.c -o tre-parse.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c tre-stack.c -o tre-stack.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -fvisibility=hidden -c xmalloc.c -o xmalloc.o
ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o
ranlib libtre.a
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/extra'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/appl'
making integrate.d from integrate.c
making interv.d from interv.c
making maxcol.d from maxcol.c
making optim.d from optim.c
making pretty.d from pretty.c
making uncmin.d from uncmin.c
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/appl'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c integrate.c -o integrate.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c interv.c -o interv.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c maxcol.c -o maxcol.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c optim.c -o optim.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pretty.c -o pretty.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c uncmin.c -o uncmin.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dchdc.f -o dchdc.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dpbfa.f -o dpbfa.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dpbsl.f -o dpbsl.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dpoco.f -o dpoco.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dpodi.f -o dpodi.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dpofa.f -o dpofa.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dposl.f -o dposl.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dqrdc.f -o dqrdc.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dqrdc2.f -o dqrdc2.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dqrls.f -o dqrls.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dqrsl.f -o dqrsl.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dqrutl.f -o dqrutl.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dsvdc.f -o dsvdc.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dtrco.f -o dtrco.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c dtrsl.f -o dtrsl.o
ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o 
ranlib libappl.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/appl'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/appl'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/nmath'
making mlutils.d from mlutils.c
making d1mach.d from d1mach.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
making fmin2.d from fmin2.c
making fprec.d from fprec.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making sign.d from sign.c
making fsign.d from fsign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making stirlerr.d from stirlerr.c
making bd0.d from bd0.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making cospi.d from cospi.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making sexp.d from sexp.c
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making dunif.d from dunif.c
making punif.d from punif.c
making qunif.d from qunif.c
making runif.d from runif.c
making dnorm.d from dnorm.c
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
making rnorm.d from rnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dnf.d from dnf.c
making dt.d from dt.c
making pt.d from pt.c
making qt.d from qt.c
making rt.d from rt.c
making dnt.d from dnt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making rnchisq.d from rnchisq.c
making dbinom.d from dbinom.c
making pbinom.d from pbinom.c
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making rpois.d from rpois.c
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making qnf.d from qnf.c
making qnt.d from qnt.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making toms708.d from toms708.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/nmath'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c mlutils.c -o mlutils.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c d1mach.c -o d1mach.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c i1mach.c -o i1mach.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fmax2.c -o fmax2.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fmin2.c -o fmin2.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fprec.c -o fprec.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fround.c -o fround.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ftrunc.c -o ftrunc.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sign.c -o sign.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fsign.c -o fsign.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c imax2.c -o imax2.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c imin2.c -o imin2.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c chebyshev.c -o chebyshev.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c log1p.c -o log1p.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lgammacor.c -o lgammacor.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gammalims.c -o gammalims.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c stirlerr.c -o stirlerr.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bd0.c -o bd0.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gamma.c -o gamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lgamma.c -o lgamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gamma_cody.c -o gamma_cody.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c beta.c -o beta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lbeta.c -o lbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c polygamma.c -o polygamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cospi.c -o cospi.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bessel_i.c -o bessel_i.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bessel_j.c -o bessel_j.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bessel_k.c -o bessel_k.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bessel_y.c -o bessel_y.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c choose.c -o choose.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c snorm.c -o snorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sexp.c -o sexp.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dgamma.c -o dgamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pgamma.c -o pgamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qgamma.c -o qgamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rgamma.c -o rgamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dbeta.c -o dbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pbeta.c -o pbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qbeta.c -o qbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rbeta.c -o rbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dunif.c -o dunif.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c punif.c -o punif.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qunif.c -o qunif.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c runif.c -o runif.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dnorm.c -o dnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pnorm.c -o pnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qnorm.c -o qnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rnorm.c -o rnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dlnorm.c -o dlnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c plnorm.c -o plnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qlnorm.c -o qlnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rlnorm.c -o rlnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c df.c -o df.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pf.c -o pf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qf.c -o qf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rf.c -o rf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dnf.c -o dnf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dt.c -o dt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pt.c -o pt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qt.c -o qt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rt.c -o rt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dnt.c -o dnt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dchisq.c -o dchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pchisq.c -o pchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qchisq.c -o qchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rchisq.c -o rchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rnchisq.c -o rnchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dbinom.c -o dbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pbinom.c -o pbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qbinom.c -o qbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rbinom.c -o rbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rmultinom.c -o rmultinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dcauchy.c -o dcauchy.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pcauchy.c -o pcauchy.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qcauchy.c -o qcauchy.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rcauchy.c -o rcauchy.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dexp.c -o dexp.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pexp.c -o pexp.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qexp.c -o qexp.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rexp.c -o rexp.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dgeom.c -o dgeom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pgeom.c -o pgeom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qgeom.c -o qgeom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rgeom.c -o rgeom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dhyper.c -o dhyper.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c phyper.c -o phyper.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qhyper.c -o qhyper.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rhyper.c -o rhyper.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dnbinom.c -o dnbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pnbinom.c -o pnbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qnbinom.c -o qnbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rnbinom.c -o rnbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dpois.c -o dpois.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ppois.c -o ppois.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qpois.c -o qpois.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rpois.c -o rpois.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dweibull.c -o dweibull.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pweibull.c -o pweibull.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qweibull.c -o qweibull.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rweibull.c -o rweibull.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dlogis.c -o dlogis.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c plogis.c -o plogis.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qlogis.c -o qlogis.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rlogis.c -o rlogis.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dnchisq.c -o dnchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pnchisq.c -o pnchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qnchisq.c -o qnchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dnbeta.c -o dnbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pnbeta.c -o pnbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qnbeta.c -o qnbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pnf.c -o pnf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pnt.c -o pnt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qnf.c -o qnf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qnt.c -o qnt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ptukey.c -o ptukey.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qtukey.c -o qtukey.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c toms708.c -o toms708.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c wilcox.c -o wilcox.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c signrank.c -o signrank.o
ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o
ranlib libnmath.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/unix'
config.status: creating src/unix/Makefile
making Rembedded.d from Rembedded.c
making dynload.d from dynload.c
making system.d from system.c
making sys-unix.d from sys-unix.c
making sys-std.d from sys-std.c
making X11.d from X11.c
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/unix'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Rembedded.c -o Rembedded.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dynload.c -o dynload.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c system.c -o system.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sys-unix.c -o sys-unix.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sys-std.c -o sys-std.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c X11.c -o X11.o
ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o
ranlib libunix.a
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/unix'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/unix'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H    -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wl,-z,relro -DR_HOME='"/<<PKGBUILDDIR>>"' \
  -o Rscript ./Rscript.c
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/unix'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/unix'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/main'
config.status: creating src/main/Makefile
making CommandLineArgs.d from CommandLineArgs.c
making Rdynload.d from Rdynload.c
making Renviron.d from Renviron.c
making RNG.d from RNG.c
making agrep.d from agrep.c
making altclasses.d from altclasses.c
making altrep.d from altrep.c
making apply.d from apply.c
making arithmetic.d from arithmetic.c
making array.d from array.c
making attrib.d from attrib.c
making bind.d from bind.c
making builtin.d from builtin.c
making character.d from character.c
making coerce.d from coerce.c
making colors.d from colors.c
making complex.d from complex.c
making connections.d from connections.c
making context.d from context.c
making cum.d from cum.c
making dcf.d from dcf.c
making datetime.d from datetime.c
making debug.d from debug.c
making deparse.d from deparse.c
making devices.d from devices.c
making dotcode.d from dotcode.c
making dounzip.d from dounzip.c
making dstruct.d from dstruct.c
making duplicate.d from duplicate.c
making edit.d from edit.c
making engine.d from engine.c
making envir.d from envir.c
making errors.d from errors.c
making eval.d from eval.c
making format.d from format.c
making gevents.d from gevents.c
making gram.d from gram.c
making gram-ex.d from gram-ex.c
making graphics.d from graphics.c
making grep.d from grep.c
making identical.d from identical.c
making inlined.d from inlined.c
making inspect.d from inspect.c
making internet.d from internet.c
making iosupport.d from iosupport.c
making lapack.d from lapack.c
making list.d from list.c
making localecharset.d from localecharset.c
making logic.d from logic.c
making main.d from main.c
making mapply.d from mapply.c
making match.d from match.c
making memory.d from memory.c
making names.d from names.c
making objects.d from objects.c
making options.d from options.c
making paste.d from paste.c
making platform.d from platform.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making plotmath.d from plotmath.c
making print.d from print.c
making printarray.d from printarray.c
making printvector.d from printvector.c
making printutils.d from printutils.c
making qsort.d from qsort.c
making radixsort.d from radixsort.c
making random.d from random.c
making raw.d from raw.c
making registration.d from registration.c
making relop.d from relop.c
making rlocale.d from rlocale.c
making saveload.d from saveload.c
making scan.d from scan.c
making seq.d from seq.c
making serialize.d from serialize.c
making sort.d from sort.c
making source.d from source.c
making split.d from split.c
making sprintf.d from sprintf.c
making startup.d from startup.c
making subassign.d from subassign.c
making subscript.d from subscript.c
making subset.d from subset.c
making summary.d from summary.c
making sysutils.d from sysutils.c
making times.d from times.c
making unique.d from unique.c
making util.d from util.c
making version.d from version.c
making g_alab_her.d from g_alab_her.c
making g_cntrlify.d from g_cntrlify.c
making g_fontdb.d from g_fontdb.c
making g_her_glyph.d from g_her_glyph.c
making Rmain.d from Rmain.c
making alloca.d from alloca.c
making mkdtemp.d from mkdtemp.c
making strdup.d from strdup.c
making strncasecmp.d from strncasecmp.c
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/main'
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c CommandLineArgs.c -o CommandLineArgs.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Rdynload.c -o Rdynload.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Renviron.c -o Renviron.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RNG.c -o RNG.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c agrep.c -o agrep.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c altclasses.c -o altclasses.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c altrep.c -o altrep.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c apply.c -o apply.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c arithmetic.c -o arithmetic.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c array.c -o array.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c attrib.c -o attrib.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bind.c -o bind.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c builtin.c -o builtin.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c character.c -o character.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c coerce.c -o coerce.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c colors.c -o colors.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c complex.c -o complex.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c connections.c -o connections.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c context.c -o context.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cum.c -o cum.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dcf.c -o dcf.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c datetime.c -o datetime.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c debug.c -o debug.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c deparse.c -o deparse.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c devices.c -o devices.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dotcode.c -o dotcode.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dounzip.c -o dounzip.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dstruct.c -o dstruct.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c duplicate.c -o duplicate.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c edit.c -o edit.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c engine.c -o engine.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c envir.c -o envir.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c errors.c -o errors.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c eval.c -o eval.o
In file included from /usr/include/string.h:495,
                 from ../../src/include/Rinlinedfuns.h:73,
                 from ../../src/include/Rinternals.h:1552,
                 from ../../src/include/Defn.h:81,
                 from eval.c:27:
In function 'strncpy',
    inlined from 'inflateAssignmentCall' at eval.c:6083:5,
    inlined from 'R_getBCInterpreterExpression' at eval.c:6136:8:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=]
  106 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
eval.c: In function 'R_getBCInterpreterExpression':
eval.c:6076:19: note: length computed here
 6076 |     size_t slen = strlen(name);
      |                   ^~~~~~~~~~~~
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c format.c -o format.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gevents.c -o gevents.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gram.c -o gram.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gram-ex.c -o gram-ex.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c graphics.c -o graphics.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c grep.c -o grep.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c identical.c -o identical.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c inlined.c -o inlined.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c inspect.c -o inspect.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c internet.c -o internet.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c iosupport.c -o iosupport.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lapack.c -o lapack.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c list.c -o list.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c localecharset.c -o localecharset.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c logic.c -o logic.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c main.c -o main.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c mapply.c -o mapply.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c match.c -o match.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c memory.c -o memory.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c names.c -o names.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c objects.c -o objects.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c options.c -o options.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c paste.c -o paste.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c platform.c -o platform.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c plot.c -o plot.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c plot3d.c -o plot3d.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c plotmath.c -o plotmath.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c print.c -o print.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c printarray.c -o printarray.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c printvector.c -o printvector.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c printutils.c -o printutils.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qsort.c -o qsort.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c radixsort.c -o radixsort.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c random.c -o random.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c raw.c -o raw.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c registration.c -o registration.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c relop.c -o relop.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rlocale.c -o rlocale.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c saveload.c -o saveload.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c scan.c -o scan.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c seq.c -o seq.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c serialize.c -o serialize.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sort.c -o sort.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c source.c -o source.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c split.c -o split.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sprintf.c -o sprintf.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c startup.c -o startup.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c subassign.c -o subassign.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c subscript.c -o subscript.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c subset.c -o subset.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c summary.c -o summary.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sysutils.c -o sysutils.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c times.c -o times.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unique.c -o unique.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c util.c -o util.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c version.c -o version.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c g_alab_her.c -o g_alab_her.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c g_cntrlify.c -o g_cntrlify.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c g_fontdb.c -o g_fontdb.o
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c g_her_glyph.c -o g_her_glyph.o
gfortran -fno-optimize-sibling-calls -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c xxxpr.f -o xxxpr.o
gcc -std=gnu99 -shared -fopenmp -Wl,-z,relro  -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altclasses.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o   `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a    -lblas -lgfortran -lm   -lreadline  -lpcre2-8 -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n  
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/main'
mkdir -p -- /<<PKGBUILDDIR>>/bin/exec
mkdir -p -- /<<PKGBUILDDIR>>/lib
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/main'
gcc -std=gnu99 -I../../src/extra  -I. -I../../src/include -I../../src/include   -I../../src/nmath -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Rmain.c -o Rmain.o
gcc -std=gnu99 -Wl,--export-dynamic -fopenmp  -L"../../lib" -Wl,-z,relro -o R.bin Rmain.o  -lR 
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/main'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/modules'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/internet'
making Rhttpd.d from Rhttpd.c
making Rsock.d from Rsock.c
making internet.d from internet.c
making libcurl.d from libcurl.c
making nanoftp.d from nanoftp.c
making nanohttp.d from nanohttp.c
making sock.d from sock.c
making sockconn.d from sockconn.c
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/internet'
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -fvisibility=hidden -c Rsock.c -o Rsock.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -fvisibility=hidden -c internet.c -o internet.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -fvisibility=hidden -c libcurl.c -o libcurl.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -fvisibility=hidden -c nanoftp.c -o nanoftp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -fvisibility=hidden -c nanohttp.c -o nanohttp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -fvisibility=hidden -c sock.c -o sock.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -fvisibility=hidden -c sockconn.c -o sockconn.o
gcc -std=gnu99 -shared -L"../../../lib" -Wl,-z,relro -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o nanoftp.o nanohttp.o sock.o sockconn.o -lcurl -lR  
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/modules/internet'
mkdir -p -- /<<PKGBUILDDIR>>/modules
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/lapack'
making Lapack.d from Lapack.c
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/lapack'
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Lapack.c -o Lapack.o
gcc -std=gnu99 -shared -L"../../../lib" -Wl,-z,relro -o lapack.so  Lapack.o  -lR  -llapack -lblas -lgfortran -lm
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/X11'
making devX11.d from devX11.c
making rotated.d from rotated.c
making rbitmap.d from rbitmap.c
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/X11'
gcc -std=gnu99 -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I. -I../../../src/include -I../../../src/include  -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c devX11.c -o devX11.o
gcc -std=gnu99 -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I. -I../../../src/include -I../../../src/include  -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rotated.c -o rotated.o
gcc -std=gnu99 -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I. -I../../../src/include -I../../../src/include  -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rbitmap.c -o rbitmap.o
gcc -std=gnu99 -shared -L"../../../lib" -Wl,-z,relro -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lz -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt  -lR -lm 
gcc -std=gnu99 -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I. -I../../../src/include -I../../../src/include  -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dataentry.c -o dataentry.o
gcc -std=gnu99 -shared -L"../../../lib" -Wl,-z,relro -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt  -lR -lm 
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/modules'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/library'
mkdir -p -- ../../library
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/profile'
building system startup profile
mkdir -p -- ../../../library/base/R
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/profile'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/translations'
building package 'translations'
mkdir -p -- ../../../library/translations
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/translations'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/translations'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/translations'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
building package 'base'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
mkdir -p -- ../../../library/base/demo
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
building package 'tools'
mkdir -p -- ../../../library/tools
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
mkdir -p -- ../../../library/tools/R
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools/src'
making text.d from text.c
making init.d from init.c
making Rmd5.d from Rmd5.c
making md5.d from md5.c
making signals.d from signals.c
making install.d from install.c
making getfmts.d from getfmts.c
making http.d from http.c
making gramLatex.d from gramLatex.c
making gramRd.d from gramRd.c
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c text.c -o text.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Rmd5.c -o Rmd5.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c md5.c -o md5.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c signals.c -o signals.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c install.c -o install.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c getfmts.c -o getfmts.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c http.c -o http.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gramLatex.c -o gramLatex.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gramRd.c -o gramRd.o
gcc -std=gnu99 -shared -L../../../../lib -Wl,-z,relro -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o -L../../../../lib -lR
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools/src'
mkdir -p -- ../../../../library/tools/libs
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
installing 'sysdata.rda'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/compiler'
building package 'compiler'
mkdir -p -- ../../../library/compiler
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/compiler'
mkdir -p -- ../../../library/compiler/R
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/compiler'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/compiler'
byte-compiling package 'compiler'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/compiler'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/compiler'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
byte-compiling package 'base'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
byte-compiling package 'tools'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
building package 'utils'
mkdir -p -- ../../../library/utils
mkdir -p -- ../../../library/utils/doc
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
mkdir -p -- ../../../library/utils/R
mkdir -p -- ../../../library/utils/Sweave
mkdir -p -- ../../../library/utils/misc
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils/src'
making init.d from init.c
making io.d from io.c
making size.d from size.c
making sock.d from sock.c
making stubs.d from stubs.c
making utils.d from utils.c
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c io.c -o io.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c size.c -o size.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sock.c -o sock.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c stubs.c -o stubs.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o
gcc -std=gnu99 -shared -L../../../../lib -Wl,-z,relro -o utils.so init.o io.o size.o sock.o stubs.o utils.o -L../../../../lib -lR
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils/src'
mkdir -p -- ../../../../library/utils/libs
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
installing 'sysdata.rda'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
byte-compiling package 'utils'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
building package 'grDevices'
mkdir -p -- ../../../library/grDevices
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
mkdir -p -- ../../../library/grDevices/R
mkdir -p -- ../../../library/grDevices/afm
mkdir -p -- ../../../library/grDevices/enc
mkdir -p -- ../../../library/grDevices/icc
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
making axis_scales.d from axis_scales.c
making chull.d from chull.c
making devices.d from devices.c
making init.d from init.c
making stubs.d from stubs.c
making colors.d from colors.c
making devCairo.d from devCairo.c
making devPicTeX.d from devPicTeX.c
making devPS.d from devPS.c
making devQuartz.d from devQuartz.c
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c axis_scales.c -o axis_scales.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c chull.c -o chull.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c devices.c -o devices.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c stubs.c -o stubs.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c colors.c -o colors.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c devCairo.c -o devCairo.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c devPicTeX.c -o devPicTeX.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c devPS.c -o devPS.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c devQuartz.c -o devQuartz.o
gcc -std=gnu99 -shared -L../../../../lib -Wl,-z,relro -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
mkdir -p -- ../../../../library/grDevices/libs
make[8]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
making cairoBM.d from cairoBM.c
make[9]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[10]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
gcc -std=gnu99 -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../../../src/modules/X11  -DHAVE_CONFIG_H   -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cairoBM.c -o cairoBM.o
gcc -std=gnu99 -shared -L"../../../../../lib" -Wl,-z,relro -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lz -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -L"../../../../../lib" -lR -lm 
make[10]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[9]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[8]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
byte-compiling package 'grDevices'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
building package 'graphics'
mkdir -p -- ../../../library/graphics
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
mkdir -p -- ../../../library/graphics/R
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
making init.d from init.c
making base.d from base.c
making graphics.d from graphics.c
making par.d from par.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making stem.d from stem.c
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c base.c -o base.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c graphics.c -o graphics.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c par.c -o par.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c plot.c -o plot.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c plot3d.c -o plot3d.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c stem.c -o stem.o
gcc -std=gnu99 -shared -L../../../../lib -Wl,-z,relro -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
mkdir -p -- ../../../../library/graphics/libs
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
byte-compiling package 'graphics'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
building package 'stats'
mkdir -p -- ../../../library/stats
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
mkdir -p -- ../../../library/stats/R
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats/src'
making init.d from init.c
making kmeans.d from kmeans.c
making ansari.d from ansari.c
making bandwidths.d from bandwidths.c
making chisqsim.d from chisqsim.c
making d2x2xk.d from d2x2xk.c
making fexact.d from fexact.c
making kendall.d from kendall.c
making ks.d from ks.c
making line.d from line.c
making smooth.d from smooth.c
making prho.d from prho.c
making swilk.d from swilk.c
making ksmooth.d from ksmooth.c
making loessc.d from loessc.c
making monoSpl.d from monoSpl.c
making isoreg.d from isoreg.c
making Srunmed.d from Srunmed.c
making dblcen.d from dblcen.c
making distance.d from distance.c
making hclust-utils.d from hclust-utils.c
making nls.d from nls.c
making rWishart.d from rWishart.c
making HoltWinters.d from HoltWinters.c
making PPsum.d from PPsum.c
making arima.d from arima.c
making burg.d from burg.c
making filter.d from filter.c
making mAR.d from mAR.c
making pacf.d from pacf.c
making starma.d from starma.c
making port.d from port.c
making family.d from family.c
making sbart.d from sbart.c
making approx.d from approx.c
making loglin.d from loglin.c
making lowess.d from lowess.c
making massdist.d from massdist.c
making splines.d from splines.c
making lm.d from lm.c
making complete_cases.d from complete_cases.c
making cov.d from cov.c
making deriv.d from deriv.c
making fft.d from fft.c
making fourier.d from fourier.c
making model.d from model.c
making optim.d from optim.c
making optimize.d from optimize.c
making integrate.d from integrate.c
making random.d from random.c
making distn.d from distn.c
making zeroin.d from zeroin.c
making rcont.d from rcont.c
making influence.d from influence.c
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c kmeans.c -o kmeans.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ansari.c -o ansari.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bandwidths.c -o bandwidths.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c chisqsim.c -o chisqsim.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c d2x2xk.c -o d2x2xk.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fexact.c -o fexact.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c kendall.c -o kendall.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ks.c -o ks.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c line.c -o line.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c smooth.c -o smooth.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c prho.c -o prho.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c swilk.c -o swilk.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ksmooth.c -o ksmooth.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c loessc.c -o loessc.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c monoSpl.c -o monoSpl.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c isoreg.c -o isoreg.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Srunmed.c -o Srunmed.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dblcen.c -o dblcen.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c distance.c -o distance.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c hclust-utils.c -o hclust-utils.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nls.c -o nls.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rWishart.c -o rWishart.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c HoltWinters.c -o HoltWinters.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c PPsum.c -o PPsum.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c arima.c -o arima.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c burg.c -o burg.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c filter.c -o filter.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c mAR.c -o mAR.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pacf.c -o pacf.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c starma.c -o starma.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c port.c -o port.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c family.c -o family.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sbart.c -o sbart.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c approx.c -o approx.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c loglin.c -o loglin.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lowess.c -o lowess.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c massdist.c -o massdist.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c splines.c -o splines.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lm.c -o lm.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c complete_cases.c -o complete_cases.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cov.c -o cov.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c deriv.c -o deriv.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fft.c -o fft.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fourier.c -o fourier.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c model.c -o model.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c optim.c -o optim.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c optimize.c -o optimize.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c integrate.c -o integrate.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c random.c -o random.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c distn.c -o distn.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c zeroin.c -o zeroin.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rcont.c -o rcont.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fopenmp -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c influence.c -o influence.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c bsplvd.f -o bsplvd.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c bvalue.f -o bvalue.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c bvalus.f -o bvalus.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c loessf.f -o loessf.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c ppr.f -o ppr.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c qsbart.f -o qsbart.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c sgram.f -o sgram.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c sinerp.f -o sinerp.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c sslvrg.f -o sslvrg.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c stxwx.f -o stxwx.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c hclust.f -o hclust.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c kmns.f -o kmns.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c eureka.f -o eureka.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c stl.f -o stl.o
gfortran -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c portsrc.f -o portsrc.o
gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -c lminfl.f -o lminfl.o
gcc -std=gnu99 -shared -L../../../../lib -Wl,-z,relro -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -llapack -lblas -lgfortran -lm -L../../../../lib -lR
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats/src'
mkdir -p -- ../../../../library/stats/libs
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
byte-compiling package 'stats'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/datasets'
building package 'datasets'
mkdir -p -- ../../../library/datasets
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/datasets'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/datasets'
mkdir -p -- ../../../library/datasets/data
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/datasets'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
building package 'methods'
mkdir -p -- ../../../library/methods
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
mkdir -p -- ../../../library/methods/R
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods/src'
making do_substitute_direct.d from do_substitute_direct.c
making init.d from init.c
making methods_list_dispatch.d from methods_list_dispatch.c
making slot.d from slot.c
making class_support.d from class_support.c
making tests.d from tests.c
making utils.d from utils.c
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c do_substitute_direct.c -o do_substitute_direct.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c methods_list_dispatch.c -o methods_list_dispatch.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slot.c -o slot.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c class_support.c -o class_support.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tests.c -o tests.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o
gcc -std=gnu99 -shared -L../../../../lib -Wl,-z,relro -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods/src'
mkdir -p -- ../../../../library/methods/libs
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
byte-compiling 'methods'
initializing class and method definitions ... done
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
building package 'grid'
mkdir -p -- ../../../library/grid
mkdir -p -- ../../../library/grid/doc
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
mkdir -p -- ../../../library/grid/R
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid/src'
making gpar.d from gpar.c
making grid.d from grid.c
making just.d from just.c
making layout.d from layout.c
making matrix.d from matrix.c
making register.d from register.c
making state.d from state.c
making unit.d from unit.c
making util.d from util.c
making viewport.d from viewport.c
gcc -std=gnu99 -I"../../../../include" -DNDEBUG    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gpar.c -o gpar.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c grid.c -o grid.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c just.c -o just.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c layout.c -o layout.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c matrix.c -o matrix.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c register.c -o register.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c state.c -o state.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unit.c -o unit.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c util.c -o util.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c viewport.c -o viewport.o
gcc -std=gnu99 -shared -L../../../../lib -Wl,-z,relro -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o -L../../../../lib -lR
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid/src'
mkdir -p -- ../../../../library/grid/libs
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
byte-compiling package 'grid'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
building package 'splines'
mkdir -p -- ../../../library/splines
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
mkdir -p -- ../../../library/splines/R
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines/src'
making splines.d from splines.c
gcc -std=gnu99 -I"../../../../include" -DNDEBUG    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c splines.c -o splines.o
gcc -std=gnu99 -shared -L../../../../lib -Wl,-z,relro -o splines.so splines.o -L../../../../lib -lR
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines/src'
mkdir -p -- ../../../../library/splines/libs
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
byte-compiling package 'splines'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats4'
building package 'stats4'
mkdir -p -- ../../../library/stats4
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats4'
mkdir -p -- ../../../library/stats4/R
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats4'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats4'
byte-compiling package 'stats4'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats4'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats4'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk'
building package 'tcltk'
mkdir -p -- ../../../library/tcltk/R
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk'
mkdir -p -- ../../../library/tcltk/exec
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
making init.d from init.c
making tcltk.d from tcltk.c
making tcltk_unix.d from tcltk_unix.c
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tcltk.c -o tcltk.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6    -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tcltk_unix.c -o tcltk_unix.o
gcc -std=gnu99 -shared -L../../../../lib -Wl,-z,relro -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib/arm-linux-gnueabihf -ltcl8.6 -L/usr/lib/arm-linux-gnueabihf -ltk8.6 -lX11 -lXss -lXext -lm -L../../../../lib -lR
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
mkdir -p -- ../../../../library/tcltk/libs
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk'
byte-compiling package 'tcltk'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
building package 'parallel'
mkdir -p -- ../../../library/parallel
mkdir -p -- ../../../library/parallel/doc
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
mkdir -p -- ../../../library/parallel/R
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
making init.d from init.c
making rngstream.d from rngstream.c
making fork.d from fork.c
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rngstream.c -o rngstream.o
gcc -std=gnu99 -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H   -fvisibility=hidden -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fork.c -o fork.o
gcc -std=gnu99 -shared -L../../../../lib -Wl,-z,relro -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
mkdir -p -- ../../../../library/parallel/libs
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
byte-compiling package 'parallel'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
installing parsed NAMESPACE files
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/library'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Entering directory '/<<PKGBUILDDIR>>/tests'
make[2]: Nothing to be done for 'R'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/tests'
you should 'make docs' now ...
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
(cd src/nmath/standalone;				\
	/usr/bin/make	CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT"		\
		CXXFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT"	\
		FFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -D_REENTRANT"	\
		CC="gcc -std=gnu99"				\
		CXX=g++			\
		F77=gfortran			\
		R_GZIPCMD="/bin/gzip -n"		\
		libRmath_la_LDFLAGS=-Wl,-soname,libRmath.so.1 \
		shared static )
make[1]: Entering directory '/<<PKGBUILDDIR>>/src/nmath/standalone'
(cd ../../include; /usr/bin/make Rmath.h)
make[2]: Entering directory '/<<PKGBUILDDIR>>/src/include'
make[2]: 'Rmath.h' is up to date.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src/include'
Copying source files
make[2]: Entering directory '/<<PKGBUILDDIR>>/src/nmath/standalone'
making mlutils.d from mlutils.c
making d1mach.d from d1mach.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
making fmin2.d from fmin2.c
making fprec.d from fprec.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making sign.d from sign.c
making fsign.d from fsign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making stirlerr.d from stirlerr.c
making bd0.d from bd0.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making cospi.d from cospi.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making sexp.d from sexp.c
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making dunif.d from dunif.c
making punif.d from punif.c
making qunif.d from qunif.c
making runif.d from runif.c
making dnorm.d from dnorm.c
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
making rnorm.d from rnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dnf.d from dnf.c
making dt.d from dt.c
making pt.d from pt.c
making qt.d from qt.c
making rt.d from rt.c
making dnt.d from dnt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making rnchisq.d from rnchisq.c
making dbinom.d from dbinom.c
making pbinom.d from pbinom.c
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making rpois.d from rpois.c
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making qnf.d from qnf.c
making qnt.d from qnt.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making toms708.d from toms708.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
making std_unif.d from std_unif.c
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath/standalone'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src/nmath/standalone'
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c mlutils.c -o mlutils.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c d1mach.c -o d1mach.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c i1mach.c -o i1mach.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c fmax2.c -o fmax2.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c fmin2.c -o fmin2.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c fprec.c -o fprec.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c fround.c -o fround.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c ftrunc.c -o ftrunc.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c sign.c -o sign.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c fsign.c -o fsign.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c imax2.c -o imax2.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c imin2.c -o imin2.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c chebyshev.c -o chebyshev.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c log1p.c -o log1p.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c lgammacor.c -o lgammacor.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c gammalims.c -o gammalims.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c stirlerr.c -o stirlerr.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c bd0.c -o bd0.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c gamma.c -o gamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c lgamma.c -o lgamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c gamma_cody.c -o gamma_cody.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c beta.c -o beta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c lbeta.c -o lbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c polygamma.c -o polygamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c cospi.c -o cospi.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c bessel_i.c -o bessel_i.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c bessel_j.c -o bessel_j.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c bessel_k.c -o bessel_k.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c bessel_y.c -o bessel_y.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c choose.c -o choose.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c snorm.c -o snorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c sexp.c -o sexp.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dgamma.c -o dgamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pgamma.c -o pgamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qgamma.c -o qgamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rgamma.c -o rgamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dbeta.c -o dbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pbeta.c -o pbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qbeta.c -o qbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rbeta.c -o rbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dunif.c -o dunif.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c punif.c -o punif.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qunif.c -o qunif.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c runif.c -o runif.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnorm.c -o dnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnorm.c -o pnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnorm.c -o qnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rnorm.c -o rnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dlnorm.c -o dlnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c plnorm.c -o plnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qlnorm.c -o qlnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rlnorm.c -o rlnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c df.c -o df.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pf.c -o pf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qf.c -o qf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rf.c -o rf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnf.c -o dnf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dt.c -o dt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pt.c -o pt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qt.c -o qt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rt.c -o rt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnt.c -o dnt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dchisq.c -o dchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pchisq.c -o pchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qchisq.c -o qchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rchisq.c -o rchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rnchisq.c -o rnchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dbinom.c -o dbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pbinom.c -o pbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qbinom.c -o qbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rbinom.c -o rbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rmultinom.c -o rmultinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dcauchy.c -o dcauchy.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pcauchy.c -o pcauchy.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qcauchy.c -o qcauchy.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rcauchy.c -o rcauchy.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dexp.c -o dexp.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pexp.c -o pexp.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qexp.c -o qexp.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rexp.c -o rexp.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dgeom.c -o dgeom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pgeom.c -o pgeom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qgeom.c -o qgeom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rgeom.c -o rgeom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dhyper.c -o dhyper.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c phyper.c -o phyper.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qhyper.c -o qhyper.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rhyper.c -o rhyper.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnbinom.c -o dnbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnbinom.c -o pnbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnbinom.c -o qnbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rnbinom.c -o rnbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dpois.c -o dpois.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c ppois.c -o ppois.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qpois.c -o qpois.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rpois.c -o rpois.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dweibull.c -o dweibull.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pweibull.c -o pweibull.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qweibull.c -o qweibull.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rweibull.c -o rweibull.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dlogis.c -o dlogis.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c plogis.c -o plogis.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qlogis.c -o qlogis.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rlogis.c -o rlogis.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnchisq.c -o dnchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnchisq.c -o pnchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnchisq.c -o qnchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnbeta.c -o dnbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnbeta.c -o pnbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnbeta.c -o qnbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnf.c -o pnf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnt.c -o pnt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnf.c -o qnf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnt.c -o qnt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c ptukey.c -o ptukey.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qtukey.c -o qtukey.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c toms708.c -o toms708.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c wilcox.c -o wilcox.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c signrank.c -o signrank.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c std_unif.c -o std_unif.lo
gcc -std=gnu99 -shared -fopenmp -Wl,-z,relro -o libRmath.so -Wl,-soname,libRmath.so.1 mlutils.lo d1mach.lo i1mach.lo fmax2.lo fmin2.lo fprec.lo fround.lo ftrunc.lo sign.lo fsign.lo imax2.lo imin2.lo chebyshev.lo log1p.lo lgammacor.lo gammalims.lo stirlerr.lo bd0.lo gamma.lo lgamma.lo gamma_cody.lo beta.lo lbeta.lo polygamma.lo cospi.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_y.lo choose.lo snorm.lo sexp.lo dgamma.lo pgamma.lo qgamma.lo rgamma.lo dbeta.lo pbeta.lo qbeta.lo rbeta.lo dunif.lo punif.lo qunif.lo runif.lo dnorm.lo pnorm.lo qnorm.lo rnorm.lo dlnorm.lo plnorm.lo qlnorm.lo rlnorm.lo df.lo pf.lo qf.lo rf.lo dnf.lo dt.lo pt.lo qt.lo rt.lo dnt.lo dchisq.lo pchisq.lo qchisq.lo rchisq.lo rnchisq.lo dbinom.lo pbinom.lo qbinom.lo rbinom.lo rmultinom.lo dcauchy.lo pcauchy.lo qcauchy.lo rcauchy.lo dexp.lo pexp.lo qexp.lo rexp.lo dgeom.lo pgeom.lo qgeom.lo rgeom.lo dhyper.lo phyper.lo qhyper.lo rhyper.lo dnbinom.lo pnbinom.lo qnbinom.lo rnbinom.lo dpois.lo ppois.lo qpois.lo rpois.lo dweibull.lo pweibull.lo qweibull.lo rweibull.lo dlogis.lo plogis.lo qlogis.lo rlogis.lo dnchisq.lo pnchisq.lo qnchisq.lo dnbeta.lo pnbeta.lo qnbeta.lo pnf.lo pnt.lo qnf.lo qnt.lo ptukey.lo qtukey.lo toms708.lo wilcox.lo signrank.lo std_unif.lo -lm
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath/standalone'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src/nmath/standalone'
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c mlutils.c -o mlutils.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c d1mach.c -o d1mach.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c i1mach.c -o i1mach.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c fmax2.c -o fmax2.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c fmin2.c -o fmin2.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c fprec.c -o fprec.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c fround.c -o fround.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c ftrunc.c -o ftrunc.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c sign.c -o sign.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c fsign.c -o fsign.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c imax2.c -o imax2.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c imin2.c -o imin2.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c chebyshev.c -o chebyshev.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c log1p.c -o log1p.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c lgammacor.c -o lgammacor.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c gammalims.c -o gammalims.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c stirlerr.c -o stirlerr.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c bd0.c -o bd0.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c gamma.c -o gamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c lgamma.c -o lgamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c gamma_cody.c -o gamma_cody.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c beta.c -o beta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c lbeta.c -o lbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c polygamma.c -o polygamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c cospi.c -o cospi.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c bessel_i.c -o bessel_i.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c bessel_j.c -o bessel_j.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c bessel_k.c -o bessel_k.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c bessel_y.c -o bessel_y.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c choose.c -o choose.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c snorm.c -o snorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c sexp.c -o sexp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dgamma.c -o dgamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pgamma.c -o pgamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qgamma.c -o qgamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rgamma.c -o rgamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dbeta.c -o dbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pbeta.c -o pbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qbeta.c -o qbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rbeta.c -o rbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dunif.c -o dunif.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c punif.c -o punif.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qunif.c -o qunif.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c runif.c -o runif.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnorm.c -o dnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnorm.c -o pnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnorm.c -o qnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rnorm.c -o rnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dlnorm.c -o dlnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c plnorm.c -o plnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qlnorm.c -o qlnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rlnorm.c -o rlnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c df.c -o df.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pf.c -o pf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qf.c -o qf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rf.c -o rf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnf.c -o dnf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dt.c -o dt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pt.c -o pt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qt.c -o qt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rt.c -o rt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnt.c -o dnt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dchisq.c -o dchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pchisq.c -o pchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qchisq.c -o qchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rchisq.c -o rchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rnchisq.c -o rnchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dbinom.c -o dbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pbinom.c -o pbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qbinom.c -o qbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rbinom.c -o rbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rmultinom.c -o rmultinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dcauchy.c -o dcauchy.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pcauchy.c -o pcauchy.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qcauchy.c -o qcauchy.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rcauchy.c -o rcauchy.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dexp.c -o dexp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pexp.c -o pexp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qexp.c -o qexp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rexp.c -o rexp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dgeom.c -o dgeom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pgeom.c -o pgeom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qgeom.c -o qgeom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rgeom.c -o rgeom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dhyper.c -o dhyper.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c phyper.c -o phyper.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qhyper.c -o qhyper.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rhyper.c -o rhyper.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnbinom.c -o dnbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnbinom.c -o pnbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnbinom.c -o qnbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rnbinom.c -o rnbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dpois.c -o dpois.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c ppois.c -o ppois.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qpois.c -o qpois.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rpois.c -o rpois.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dweibull.c -o dweibull.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pweibull.c -o pweibull.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qweibull.c -o qweibull.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rweibull.c -o rweibull.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dlogis.c -o dlogis.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c plogis.c -o plogis.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qlogis.c -o qlogis.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c rlogis.c -o rlogis.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnchisq.c -o dnchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnchisq.c -o pnchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnchisq.c -o qnchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c dnbeta.c -o dnbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnbeta.c -o pnbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnbeta.c -o qnbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnf.c -o pnf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c pnt.c -o pnt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnf.c -o qnf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qnt.c -o qnt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c ptukey.c -o ptukey.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c qtukey.c -o qtukey.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c toms708.c -o toms708.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c wilcox.c -o wilcox.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c signrank.c -o signrank.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -c std_unif.c -o std_unif.o
ar -cr libRmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o std_unif.o
ranlib libRmath.a
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath/standalone'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath/standalone'
R_GZIPCMD="/bin/gzip -n" \
	/usr/bin/make docs R_CMD_BUILD_HELP_OPTS="--txt --example"
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/m4'
make[2]: Nothing to be done for 'R'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/m4'
make[2]: Entering directory '/<<PKGBUILDDIR>>/tools'
make[2]: Nothing to be done for 'R'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/tools'
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc/html'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc/html'
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc/manual'
make[3]: Nothing to be done for 'R'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc/manual'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/etc'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/etc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/share'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/share'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/scripts'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/scripts'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/scripts'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/scripts'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/include'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/include/R_ext'
make[4]: Nothing to be done for 'R'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/include/R_ext'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/include'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/extra'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[5]: 'Makedeps' is up to date.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[5]: 'libtre.a' is up to date.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/extra'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/appl'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/appl'
make[4]: 'libappl.a' is up to date.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/appl'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/appl'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/nmath'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/nmath'
make[4]: 'libnmath.a' is up to date.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/unix'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/unix'
make[4]: 'libunix.a' is up to date.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/unix'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/unix'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H    -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -Wl,-z,relro -DR_HOME='"/<<PKGBUILDDIR>>"' \
  -o Rscript ./Rscript.c
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/unix'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/unix'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/main'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/main'
/<<PKGBUILDDIR>>/lib/libR.so is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/main'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/main'
/<<PKGBUILDDIR>>/bin/exec/R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/modules'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[5]: 'internet.so' is up to date.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[5]: 'lapack.so' is up to date.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[5]: 'R_X11.so' is up to date.
make[5]: 'R_de.so' is up to date.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/X11'
/<<PKGBUILDDIR>>/modules/R_X11.so is unchanged
/<<PKGBUILDDIR>>/modules/R_de.so is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/modules'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/library'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/profile'
building system startup profile
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/profile'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/translations'
building package 'translations'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/translations'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/translations'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/translations'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
building package 'base'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
building package 'tools'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools/src'
../../../../library/tools/libs/tools.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
installing 'sysdata.rda'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/compiler'
building package 'compiler'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/compiler'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/compiler'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/compiler'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/compiler'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/compiler'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Nothing to be done for 'mklazycomp'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
make[4]: Nothing to be done for 'mklazycomp'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
building package 'utils'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
all.R is unchanged
make[5]: Nothing to be done for 'iconvlist'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils/src'
../../../../library/utils/libs/utils.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
installing 'sysdata.rda'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
building package 'grDevices'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
../../../../library/grDevices/libs/grDevices.so is unchanged
make[8]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[9]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[10]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[10]: 'cairo.so' is up to date.
make[10]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[9]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[8]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
building package 'graphics'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
../../../../library/graphics/libs/graphics.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
building package 'stats'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats/src'
../../../../library/stats/libs/stats.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/datasets'
building package 'datasets'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/datasets'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/datasets'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/datasets'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
building package 'methods'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods/src'
../../../../library/methods/libs/methods.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
make[5]: Nothing to be done for 'RfilesLazy'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
building package 'grid'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid/src'
../../../../library/grid/libs/grid.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
building package 'splines'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines/src'
../../../../library/splines/libs/splines.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats4'
building package 'stats4'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats4'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats4'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats4'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats4'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats4'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk'
building package 'tcltk'
all.R is unchanged
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
../../../../library/tcltk/libs/tcltk.so is unchanged
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
building package 'parallel'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
../../../../library/parallel/libs/parallel.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
installing parsed NAMESPACE files
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/library'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Entering directory '/<<PKGBUILDDIR>>/tests'
make[2]: Nothing to be done for 'R'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/tests'
you should 'make docs' now ...
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
creating doc/NEWS
creating doc/NEWS.pdf
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc/manual'
creating doc/manual/R-FAQ.html
creating doc/manual/version.texi
creating doc/manual/R-admin.html
creating doc/manual/R-data.html
creating doc/manual/R-exts.html
creating doc/manual/R-intro.html
creating doc/manual/R-ints.html
creating doc/manual/R-lang.html
make[4]: Entering directory '/<<PKGBUILDDIR>>/doc/html'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/doc/html'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc/manual'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src/library'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/library'
installing parsed Rd
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library'
  base
  stats
  utils
  methods
  graphics
  grDevices
  datasets
  grid
  tools
  tcltk
  splines
  stats4
  compiler
  parallel
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/library'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/library'
building/updating package metadata ...
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/library'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/library'
writing package indices
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/library'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src/library'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
/usr/bin/make javaconf
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/m4'
make[2]: Nothing to be done for 'R'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/m4'
make[2]: Entering directory '/<<PKGBUILDDIR>>/tools'
make[2]: Nothing to be done for 'R'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/tools'
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc/html'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc/html'
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc/manual'
make[3]: Nothing to be done for 'R'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc/manual'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/etc'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/etc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/share'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/share'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/scripts'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/scripts'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/scripts'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/scripts'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/include'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/include/R_ext'
make[4]: Nothing to be done for 'R'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/include/R_ext'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/include'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/extra'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[5]: 'Makedeps' is up to date.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[5]: 'libtre.a' is up to date.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/extra'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/appl'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/appl'
make[4]: 'libappl.a' is up to date.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/appl'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/appl'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/nmath'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/nmath'
make[4]: 'libnmath.a' is up to date.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/unix'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/unix'
make[4]: 'libunix.a' is up to date.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/unix'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/unix'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H    -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -Wl,-z,relro -DR_HOME='"/<<PKGBUILDDIR>>"' \
  -o Rscript ./Rscript.c
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/unix'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/unix'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/main'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/main'
/<<PKGBUILDDIR>>/lib/libR.so is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/main'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/main'
/<<PKGBUILDDIR>>/bin/exec/R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/modules'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[5]: 'internet.so' is up to date.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[5]: 'lapack.so' is up to date.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[5]: 'R_X11.so' is up to date.
make[5]: 'R_de.so' is up to date.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/modules/X11'
/<<PKGBUILDDIR>>/modules/R_X11.so is unchanged
/<<PKGBUILDDIR>>/modules/R_de.so is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/modules'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/library'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/profile'
building system startup profile
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/profile'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/translations'
building package 'translations'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/translations'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/translations'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/translations'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
building package 'base'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
building package 'tools'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools/src'
../../../../library/tools/libs/tools.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
installing 'sysdata.rda'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/compiler'
building package 'compiler'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/compiler'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/compiler'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/compiler'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/compiler'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/compiler'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Nothing to be done for 'mklazycomp'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/tools'
make[4]: Nothing to be done for 'mklazycomp'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tools'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
building package 'utils'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
all.R is unchanged
make[5]: Nothing to be done for 'iconvlist'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils/src'
../../../../library/utils/libs/utils.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
installing 'sysdata.rda'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/utils'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/utils'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
building package 'grDevices'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
../../../../library/grDevices/libs/grDevices.so is unchanged
make[8]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[9]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[10]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[10]: 'cairo.so' is up to date.
make[10]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[9]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[8]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src/cairo'
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grDevices'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
building package 'graphics'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
../../../../library/graphics/libs/graphics.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/graphics'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
building package 'stats'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats/src'
../../../../library/stats/libs/stats.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/datasets'
building package 'datasets'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/datasets'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/datasets'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/datasets'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
building package 'methods'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods/src'
../../../../library/methods/libs/methods.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/methods'
make[5]: Nothing to be done for 'RfilesLazy'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/methods'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
building package 'grid'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid/src'
../../../../library/grid/libs/grid.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/grid'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/grid'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
building package 'splines'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines/src'
../../../../library/splines/libs/splines.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/splines'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/splines'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats4'
building package 'stats4'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats4'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats4'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/stats4'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats4'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/stats4'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk'
building package 'tcltk'
all.R is unchanged
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
../../../../library/tcltk/libs/tcltk.so is unchanged
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk/src'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/tcltk'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
building package 'parallel'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
all.R is unchanged
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[6]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
make[7]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
../../../../library/parallel/libs/parallel.so is unchanged
make[7]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel/src'
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[5]: Entering directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[5]: Nothing to be done for 'mklazycomp'.
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/parallel'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/library/base'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/library/base'
installing parsed NAMESPACE files
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/library'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Entering directory '/<<PKGBUILDDIR>>/tests'
make[2]: Nothing to be done for 'R'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/tests'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
configuring Java ...
Java interpreter : /usr/lib/jvm/default-java/bin/java
Java version     : 11.0.6
Java home path   : /usr/lib/jvm/default-java
Java compiler    : /usr/lib/jvm/default-java/bin/javac
Java headers gen.: 
Java archive tool: /usr/lib/jvm/default-java/bin/jar

trying to compile and link a JNI program 
detected JNI cpp flags    : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux
detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm
make[3]: Entering directory '/tmp/Rjavareconf.XKTGkV'
gcc -std=gnu99 -I"/<<PKGBUILDDIR>>/include" -DNDEBUG -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux    -fpic  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c conftest.c -o conftest.o
gcc -std=gnu99 -shared -L/<<PKGBUILDDIR>>/lib -Wl,-z,relro -o conftest.so conftest.o -L/usr/lib/jvm/default-java/lib/server -ljvm -L/<<PKGBUILDDIR>>/lib -lR
make[3]: Leaving directory '/tmp/Rjavareconf.XKTGkV'


JAVA_HOME        : /usr/lib/jvm/default-java
Java library path: $(JAVA_HOME)/lib/server
JNI cpp flags    : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux
JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm
Updating Java configuration in /<<PKGBUILDDIR>>
Done.

make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
touch make-arch-stamp
 fakeroot debian/rules binary-arch
*** install-arch ***
dh_testdir
dh_testroot
dh_prep -a
dh_installdirs -A
/<<PKGBUILDDIR>>/debian/r-base-core
/usr/bin/make DESTDIR=/<<PKGBUILDDIR>>/debian/r-base-core install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/m4'
make[2]: Nothing to be done for 'install'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/m4'
make[2]: Entering directory '/<<PKGBUILDDIR>>/tools'
make[2]: Nothing to be done for 'install'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/tools'
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc'
installing doc ...
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/doc
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/man/man1
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc/html'
installing doc/html ...
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/doc/html
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc/html'
make[3]: Entering directory '/<<PKGBUILDDIR>>/doc/manual'
installing doc/manual ...
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/doc/manual
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/doc/manual/images
make[3]: Leaving directory '/<<PKGBUILDDIR>>/doc/manual'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/etc'
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/R/etc
installing etc ...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/etc'
make[2]: Entering directory '/<<PKGBUILDDIR>>/share'
installing share ...
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/R
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/dictionaries
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/encodings
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/java
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/licenses
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/make
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/Rd
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/Rd/macros
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/sh
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/texmf
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/texmf/bibtex/bib
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/texmf/bibtex/bst
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/texmf/tex/latex
make[2]: Leaving directory '/<<PKGBUILDDIR>>/share'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/scripts'
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/R/bin
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/scripts'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/include'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/include/R_ext'
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/include/R_ext
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/include/R_ext'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/include'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/extra'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/extra/blas'
make[4]: Nothing to be done for 'install'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/blas'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[4]: Nothing to be done for 'install'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/tre'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/extra/tzone'
make[4]: Nothing to be done for 'install'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/tzone'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/extra/xdr'
make[4]: Nothing to be done for 'install'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/xdr'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/extra/intl'
make[4]: Nothing to be done for 'install'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/extra/intl'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/extra'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/appl'
make[3]: Nothing to be done for 'install'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/appl'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/nmath'
make[3]: Nothing to be done for 'install'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/unix'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H    -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -Wl,-z,relro -DR_HOME='"/usr/lib/R"' \
  -o Rscript ./Rscript.c
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/pkgconfig
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/unix'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/main'
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/R/bin/exec
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/main'
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/R/lib
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/main'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/modules'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/internet'
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/R/modules
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/internet'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/lapack'
make[4]: Entering directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/modules/X11'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/modules'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src/library'
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/R/library
installing packages ...
  building HTML index ...
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/library'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Entering directory '/<<PKGBUILDDIR>>/tests'
make[2]: Nothing to be done for 'install'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/tests'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
(cd src/unix; 						\
	rm -vf Rscript /<<PKGBUILDDIR>>/debian/r-base-core/usr/bin/Rscript;	\
	/usr/bin/make	CFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT"		\
		CXXFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT"	\
		FFLAGS="-g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -D_REENTRANT"	\
		CC="gcc -std=gnu99"				\
		CXX=g++			\
		F77=gfortran			\
		RHOME=/usr/lib/R			\
		DESTDIR=/<<PKGBUILDDIR>>/debian/r-base-core			\
		install-Rscript )
removed 'Rscript'
removed '/<<PKGBUILDDIR>>/debian/r-base-core/usr/bin/Rscript'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src/unix'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H    -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -D_REENTRANT -Wl,-z,relro -DR_HOME='"/usr/lib/R"' \
  -o Rscript ./Rscript.c
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src/unix'
#ls -ltr /<<PKGBUILDDIR>>/debian/r-base-core/usr/bin/
#strings src/unix/Rscript
cp -vax src/unix/Rscript /<<PKGBUILDDIR>>/debian/r-base-core/usr/bin/
'src/unix/Rscript' -> '/<<PKGBUILDDIR>>/debian/r-base-core/usr/bin/Rscript'
#ls -ltr /<<PKGBUILDDIR>>/debian/r-base-core/usr/bin/
#strings /<<PKGBUILDDIR>>/debian/r-base-core/usr/bin/Rscript
(cd src/nmath/standalone;				\
	/usr/bin/make DESTDIR=/<<PKGBUILDDIR>>/debian/r-base-core install )
make[1]: Entering directory '/<<PKGBUILDDIR>>/src/nmath/standalone'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src/include'
make[2]: 'Rmath.h' is up to date.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src/include'
/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/include/Rmath.h is unchanged
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src/nmath/standalone'
chmod a+x	/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/share/sh/echo.sh
rm -v	/<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/R/COPYING
removed '/<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/R/COPYING'
(cd /<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/R/; \
	ln -s ../../share/common-licenses/GPL-2 COPYING)
rm -v	/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/doc/COPYING
removed '/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/doc/COPYING'
(cd /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/doc; \
	ln -s ../../../share/common-licenses/GPL-2 COPYING)
(cd /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/texmf/tex/latex && 	\
    ln -s ../../../R/share/texmf R)
dh_movefiles	--sourcedir=debian/r-base-core -pr-doc-html
dh_movefiles	--sourcedir=debian/r-base-core -pr-base-html
make		prefix=/<<PKGBUILDDIR>>/debian/r-base-core/usr			\
		rdocdir=/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/R/doc	\
		install-pdf
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc/manual'
creating doc/manual/version.tex
collecting LaTeX docs for package 'base' ...
Converting parsed Rd's to LaTeX ...........................................
collecting LaTeX docs for package 'tools' ...
Converting parsed Rd's to LaTeX ......
collecting LaTeX docs for package 'utils' ...
Converting parsed Rd's to LaTeX ...............
collecting LaTeX docs for package 'grDevices' ...
Converting parsed Rd's to LaTeX .......
collecting LaTeX docs for package 'graphics' ...
Converting parsed Rd's to LaTeX .......
collecting LaTeX docs for package 'stats' ...
Converting parsed Rd's to LaTeX ..............................
collecting LaTeX docs for package 'datasets' ...
Converting parsed Rd's to LaTeX ........
collecting LaTeX docs for package 'methods' ...
Converting parsed Rd's to LaTeX ........
collecting LaTeX docs for package 'grid' ...
Converting parsed Rd's to LaTeX .........
collecting LaTeX docs for package 'splines' ...
Converting parsed Rd's to LaTeX .
collecting LaTeX docs for package 'stats4' ...
Converting parsed Rd's to LaTeX .
collecting LaTeX docs for package 'tcltk' ...
Converting parsed Rd's to LaTeX .
collecting LaTeX docs for package 'compiler' ...
Converting parsed Rd's to LaTeX 
collecting LaTeX docs for package 'parallel' ...
Converting parsed Rd's to LaTeX .
PDF/LaTeX documentation: full reference index ...
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./fullrefman.tex
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
(../../share/texmf/tex/latex/Rd.sty
(/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/bm.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/inconsolata/zi4.sty
`inconsolata-zi4' v1.12, 2019/05/17 Text macros for Inconsolata (msharpe)
(/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty
(/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex
(/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex
(/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex)))))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))

Package hyperref Warning: Option `hyperindex' has already been used,
(hyperref)                setting the option has no effect on input line 377.


Package hyperref Warning: Option `pagebackref' has already been used,
(hyperref)                setting the option has no effect on input line 377.

) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)))
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
Writing index file fullrefman.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
No file fullrefman.aux.
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd)
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (./version.tex)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}] [1] [2] (./base-pkg.tex
Chapter 1.
(/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd) [1] [2]
Underfull \hbox (badness 6995) in paragraph at lines 141--149
[]\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber \T1/zi4/m/n/10 x \T1
/ptm/m/n/10 such that \T1/zi4/m/n/10 1 -x != 1\T1/ptm/m/n/10 . It

Underfull \hbox (badness 10000) in paragraph at lines 141--149
\T1/ptm/m/n/10 equals \T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits \T1/pt
m/m/n/10 if \T1/zi4/m/n/10 double.base

Underfull \hbox (badness 10000) in paragraph at lines 141--149
\T1/ptm/m/n/10 is 2 or \T1/zi4/m/n/10 double.rounding \T1/ptm/m/n/10 is 0; oth-
er-wise, it is \T1/zi4/m/n/10 (double.base

Underfull \hbox (badness 10000) in paragraph at lines 141--149
\T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2\T1/ptm/m/n/10 . Nor-mally \T1/zi4/m
/n/10 1.110223e-16\T1/ptm/m/n/10 . As

Underfull \hbox (badness 4995) in paragraph at lines 141--149
\T1/zi4/m/n/10 double.neg.ulp.digits \T1/ptm/m/n/10 is bounded be-low by \T1/zi
4/m/n/10 -(double.digits + 3)\T1/ptm/m/n/10 ,
[3] [4] [5]
Underfull \hbox (badness 1178) in paragraph at lines 297--301
[]\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][]\T1/zi4/m/n/
10 options[][][]("pkgType")\T1/ptm/m/n/10 . Val-ues
[6] [7] [8]
Underfull \hbox (badness 2556) in paragraph at lines 534--540
[]\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `\T
1/zi4/m/n/10 insertions\T1/ptm/m/n/10 ',
[9] [10] [11] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd)
[12] [13] [14] [15] [16] [17] [18]
Underfull \hbox (badness 2671) in paragraph at lines 1178--1181
[]\T1/ptm/m/n/10 If the calls to \T1/zi4/m/n/10 FUN \T1/ptm/m/n/10 re-turn vec-
tors of dif-fer-ent lengths, \T1/zi4/m/n/10 apply \T1/ptm/m/n/10 re-turns a lis
t of length
[19] [20] [21] (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd)
(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [22] [23] [24]
[25] [26] [27] [28] [29] [30]
Overfull \hbox (26.27782pt too wide) in paragraph at lines 1966--1966
 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen
t-date-and-times-in-MATLAB.html)[] 
[31] [32] [33] [34] [35] [36] [37]
Underfull \hbox (badness 10000) in paragraph at lines 2402--2404
[]\T1/ptm/m/n/10 The val-ues of the splits can also be ob-tained (less ef-fi-ci
ently) by

Underfull \hbox (badness 10000) in paragraph at lines 2405--2410
[][][]\T1/zi4/m/n/10 apply[][][] \T1/ptm/m/n/10 al-ways sim-pli-fies com-mon le
ngth re-sults, so at-tempt-ing to split via

Underfull \hbox (badness 1102) in paragraph at lines 2405--2410
\T1/zi4/m/n/10 apply(x,MARGIN,identity) \T1/ptm/m/n/10 does not work (as it sim
-ply gives \T1/zi4/m/n/10 x\T1/ptm/m/n/10 ). By chain-ing \T1/zi4/m/n/10 asplit

[38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52]
[53] [54] [55] [56] [57] [58] [59]
Underfull \hbox (badness 10000) in paragraph at lines 3784--3786
[]\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim
-ited by set-ting
[60] [61] [62]
Overfull \hbox (6.42029pt too wide) in paragraph at lines 4025--4025
 []   \T1/zi4/m/n/10 c.factor <- function(..., recursive=TRUE) unlist(list(...)
, recursive=recursive) 
[63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77]
[78]
Underfull \hbox (badness 2521) in paragraph at lines 5046--5048
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c
har-ac-ter by
[79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93]
[94] [95] [96]
Overfull \hbox (5.27168pt too wide) in paragraph at lines 6202--6202
 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex
_)), is.na(Im(NA_complex_)))[] 
[97] [98] [99] [100] [101] [102]
Overfull \hbox (46.35893pt too wide) in paragraph at lines 6611--6613
[]\T1/ptm/m/n/10 character string, par-tially matched to \T1/zi4/m/n/10 c("defa
ult","internal","wininet","libcurl")\T1/ptm/m/n/10 : 
[103] [104]
Underfull \hbox (badness 10000) in paragraph at lines 6759--6762
[]\T1/ptm/m/n/10 A note on `\T1/zi4/m/n/10 file://\T1/ptm/m/n/10 ' URLs. The mo
st gen-eral form (from RFC1738) is
[105] [106]
Underfull \hbox (badness 6063) in paragraph at lines 6941--6947
[]\T1/ptm/m/n/10 As from \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.0.0 the en-cod-ing \
T1/zi4/m/n/10 "UTF-8-BOM" \T1/ptm/m/n/10 is ac-cepted for read-ing and will re-


Underfull \hbox (badness 2343) in paragraph at lines 6941--6947
\T1/ptm/m/n/10 move a Byte Or-der Mark if present (which it of-ten is for files
 and web-pages gen-er-

Underfull \hbox (badness 1708) in paragraph at lines 6941--6947
\T1/ptm/m/n/10 ated by Mi-crosoft ap-pli-ca-tions). If a BOM is re-quired (it i
s not rec-om-mended) when

Underfull \hbox (badness 1831) in paragraph at lines 6941--6947
\T1/ptm/m/n/10 writ-ing it should be writ-ten ex-plic-itly, e.g. by \T1/zi4/m/n
/10 writeChar("\ufeff",con,eos = NULL) \T1/ptm/m/n/10 or
[107]
Underfull \hbox (badness 3568) in paragraph at lines 7003--7010
\T1/zi4/m/n/10 txt$[][]\T1/ptm/m/n/10 ), which can also be spec-i-fied as \T1/z
i4/m/n/10 "X11_primary" \T1/ptm/m/n/10 and the sec-ondary se-lec-tion as
[108] [109]
Underfull \vbox (badness 3803) has occurred while \output is active [110]
Underfull \vbox (badness 10000) has occurred while \output is active [111]
[112]
Underfull \hbox (badness 1077) in paragraph at lines 7330--7336
[]\T1/ptm/m/n/10 A length-one log-i-cal vec-tor that is not \T1/zi4/m/n/10 NA\T
1/ptm/m/n/10 . Con-di-tions of length greater

Underfull \hbox (badness 1231) in paragraph at lines 7330--7336
\T1/ptm/m/n/10 than one are cur-rently ac-cepted with a warn-ing, but only the 
first el-e-
[113] [114] [115] [116] [117] [118]
Underfull \hbox (badness 2096) in paragraph at lines 7671--7675
\T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https
 : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$
[][]\T1/ptm/m/n/10 .
[119] [120]
Underfull \hbox (badness 2351) in paragraph at lines 7789--7792
[][][]\T1/zi4/m/n/10 split[][][] \T1/ptm/m/n/10 for split-ting a vari-able ac-c
ord-ing to a group fac-tor; [][]\T1/zi4/m/n/10 factor[][][]\T1/ptm/m/n/10 , [][
]\T1/zi4/m/n/10 tabulate[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 table[][][]\T
1/ptm/m/n/10 ,
[121] [122] [123] [124] [125]
Underfull \hbox (badness 4479) in paragraph at lines 8115--8125
[][][]\T1/zi4/m/n/10 I[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 plot.data.frame
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 print.data.frame[][][]\T1/ptm/m/n/10 
, [][]\T1/zi4/m/n/10 row.names[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 names[]
[][] \T1/ptm/m/n/10 (for the col-umn names),
[126] [127] [128] [129] [130] [131]
Underfull \hbox (badness 1629) in paragraph at lines 8562--8574
[]\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a
re ig-nored, and real times

Underfull \hbox (badness 1609) in paragraph at lines 8562--8574
\T1/ptm/m/n/10 there is a prob-lem in the POSIX/C99 stan-dard with \T1/zi4/m/n/
10 "1969-12-31 23:59:59 UTC"\T1/ptm/m/n/10 , which

Underfull \hbox (badness 2426) in paragraph at lines 8562--8574
\T1/ptm/m/n/10 is \T1/zi4/m/n/10 -1 \T1/ptm/m/n/10 in cal-en-dar time and that 
value is on those OSes also used as an er-ror code.
[132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142]
Underfull \hbox (badness 1178) in paragraph at lines 9298--9302
[]\T1/ptm/m/n/10 If true, [][]\T1/zi4/m/n/10 list[][][]\T1/ptm/m/n/10 s and ato
mic vec-tors with non-[][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 names (see [][
]\T1/zi4/m/n/10 names[][][]\T1/ptm/m/n/10 ) are de-
[143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154]
[155] [156] [157] [158] [159] [160]
Underfull \hbox (badness 1735) in paragraph at lines 10446--10450
\T1/zi4/m/n/10 754-[]2008$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/n/10 https : / / 
en . wikipedia . org / wiki / Double _ precision$[][]\T1/ptm/m/n/10 , [][]$\T1/
zi4/m/n/10 https : / / en . wikipedia .
[161] [162] [163] [164] [165] [166] [167]
Underfull \hbox (badness 6396) in paragraph at lines 10885--10893
[]\T1/ptm/m/n/10 For the de-fault meth-ods, and when-ever there are equiv-a-len
t method def-i-ni-tions for

Underfull \hbox (badness 1946) in paragraph at lines 10885--10893
\T1/zi4/m/n/10 duplicated \T1/ptm/m/n/10 and \T1/zi4/m/n/10 anyDuplicated\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 anyDuplicated(x,...) \T1/ptm/m/n/10 is a ``gen-er-al-
ized'' short-cut for
[168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179]
[180] [181] [182] [183]
Underfull \hbox (badness 4569) in paragraph at lines 12002--12006
[]\T1/ptm/m/n/10 When eval-u-at-ing ex-pres-sions in a data frame that has been
 passed as an ar-gu-ment

Underfull \hbox (badness 2401) in paragraph at lines 12002--12006
\T1/ptm/m/n/10 to a func-tion, the rel-e-vant en-clo-sure is of-ten the caller'
s en-vi-ron-ment, i.e., one needs
[184]
Underfull \vbox (badness 10000) has occurred while \output is active [185]
[186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197]
[198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208]
Underfull \hbox (badness 2253) in paragraph at lines 13665--13667
[]\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is
 done: see
[209] [210]
Underfull \hbox (badness 1565) in paragraph at lines 13738--13742
[][][]\T1/zi4/m/n/10 Sys.readlink[][][] \T1/ptm/m/n/10 to find out about sym-bo
lic links, [][]\T1/zi4/m/n/10 files[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 fi
le.access[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files[][][]\T1/ptm/m/n/
10 , and

Underfull \hbox (badness 4927) in paragraph at lines 13782--13784
[]\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as \T1/zi4/m
/n/10 PATH \T1/ptm/m/n/10 and \T1/zi4/m/n/10 R_LIBS \T1/ptm/m/n/10 with \T1/zi4
/m/n/10 fsep =
[211] [212]
Underfull \hbox (badness 3148) in paragraph at lines 13875--13880
[][][]\T1/zi4/m/n/10 files[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files[
][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 help[][][]\T1/ptm/m/n/10 ; [][]\T1/zi4
/m/n/10 RShowDoc[][][] \T1/ptm/m/n/10 call \T1/zi4/m/n/10 file.show() \T1/ptm/m
/n/10 for \T1/zi4/m/n/10 type = "text"\T1/ptm/m/n/10 . Con-sider
[213]
Underfull \hbox (badness 1466) in paragraph at lines 13922--13925
[]\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For \T1/
zi4/m/n/10 file.copy \T1/ptm/m/n/10 and
[214]
Underfull \hbox (badness 10000) in paragraph at lines 14049--14053
[][][]\T1/zi4/m/n/10 file.info[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.ac
cess[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.path[][][]\T1/ptm/m/n/10 , [
][]\T1/zi4/m/n/10 file.show[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 unlink[][][]\T1/ptm/m/n/10 , [][]\T1/
zi4/m/n/10 basename[][][]\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 14060--14063
[][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][
] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik
i /
[215] [216] [217] [218] [219]
Underfull \hbox (badness 3965) in paragraph at lines 14352--14356
[]\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr
i-bu-tion func-tion, and in-deed,
[220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230] [231]
Underfull \hbox (badness 4429) in paragraph at lines 15128--15131
[]\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][]
\T1/zi4/m/n/10 complex[][][] \T1/ptm/m/n/10 only for
[232] [233]
Underfull \hbox (badness 10000) in paragraph at lines 15234--15236
[]\T1/ptm/m/n/10 This works via \T1/zi4/m/n/10 prettyNum()\T1/ptm/m/n/10 , whic
h calls

Underfull \hbox (badness 1215) in paragraph at lines 15234--15236
\T1/zi4/m/n/10 .format.zeros(*,replace=replace.zero) \T1/ptm/m/n/10 three times
 in this case, see

Underfull \hbox (badness 10000) in paragraph at lines 15256--15261
[]\T1/ptm/m/n/10 For num-bers, \T1/zi4/m/n/10 formatC() \T1/ptm/m/n/10 calls \T
1/zi4/m/n/10 prettyNum() \T1/ptm/m/n/10 when needed which it-self calls

Underfull \hbox (badness 1558) in paragraph at lines 15256--15261
\T1/zi4/m/n/10 .format.zeros(*,replace=replace.zero)\T1/ptm/m/n/10 . (\T1/ptm/m
/it/10 ``when needed''\T1/ptm/m/n/10 : when \T1/zi4/m/n/10 zero.print \T1/ptm/m
/n/10 is not

Underfull \hbox (badness 10000) in paragraph at lines 15268--15272
[]\T1/zi4/m/n/10 formatC \T1/ptm/m/n/10 does not nec-es-sar-ily align the num-b
ers on the dec-i-mal point, so

Underfull \hbox (badness 2426) in paragraph at lines 15268--15272
\T1/zi4/m/n/10 formatC(c(6.11,13.1),digits = 2,format = "fg") \T1/ptm/m/n/10 gi
ves \T1/zi4/m/n/10 c("6.1"," 13")\T1/ptm/m/n/10 . If you want
[234]
Underfull \hbox (badness 2035) in paragraph at lines 15307--15311
[]\T1/ptm/m/n/10 The de-fault for \T1/zi4/m/n/10 decimal.mark \T1/ptm/m/n/10 in
 \T1/zi4/m/n/10 formatC() \T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/pt
m/m/n/10 3.2.0: for use within
[235]
Underfull \vbox (badness 10000) has occurred while \output is active [236]
[237] [238] [239] [240] [241] [242] [243]
Underfull \hbox (badness 2452) in paragraph at lines 15906--15910
[]\T1/zi4/m/n/10 gctorture2 \T1/ptm/m/n/10 can also be in-voked via en-vi-ron-m
ent vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses-

Underfull \hbox (badness 1147) in paragraph at lines 15906--15910
\T1/ptm/m/n/10 sion. \T1/zi4/m/n/10 R_GCTORTURE \T1/ptm/m/n/10 cor-re-sponds to
 the \T1/zi4/m/n/10 step \T1/ptm/m/n/10 ar-gu-ment, \T1/zi4/m/n/10 R_GCTORTURE_
WAIT \T1/ptm/m/n/10 to \T1/zi4/m/n/10 wait\T1/ptm/m/n/10 , and
[244] [245] [246]
Underfull \hbox (badness 1092) in paragraph at lines 16079--16084
[][]\T1/zi4/m/n/10 library.dynam[][][]\T1/ptm/m/n/10 , or can be found af-ter t
he DLL has been loaded us-ing
[247] [248] [249]
Underfull \hbox (badness 6741) in paragraph at lines 16329--16333
\T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing \
T1/zi4/m/n/10 CRoutine\T1/ptm/m/n/10 , \T1/zi4/m/n/10 CallRoutine\T1/ptm/m/n/10
 ,
[250] [251] [252] [253] [254] [255] [256] [257] [258]
Underfull \vbox (badness 3803) has occurred while \output is active [259]
Underfull \vbox (badness 10000) has occurred while \output is active [260]
[261] [262] [263] [264] [265] [266] [267] [268] [269]
Underfull \hbox (badness 1478) in paragraph at lines 17622--17625
[]\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha
r-ac-ter vec-tor
[270] [271] [272] [273]
Underfull \hbox (badness 10000) in paragraph at lines 17877--17879
[]\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 http : / / www
 . unicode . org / reports / tr35 /
[274] [275] [276] [277] [278] [279] [280] [281] [282]
Underfull \hbox (badness 1442) in paragraph at lines 18477--18479
[]\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed 
and by [][]\T1/zi4/m/n/10 dev.new[][][]\T1/ptm/m/n/10 : see
[283]
Underfull \hbox (badness 2452) in paragraph at lines 18569--18585
[][][]\T1/zi4/m/n/10 as.character[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.c
omplex[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.double[][][]\T1/ptm/m/n/10 ,
 [][]\T1/zi4/m/n/10 as.integer[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.logi
cal[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.raw[][][]\T1/ptm/m/n/10 , [][]\
T1/zi4/m/n/10 as.vector[][][]\T1/ptm/m/n/10 ,
[284] [285] [286] [287] [288] [289] [290]
Underfull \hbox (badness 1248) in paragraph at lines 18988--18991
[]\T1/zi4/m/n/10 is.atomic \T1/ptm/m/n/10 is true for the [][]atomic[][][] type
s (\T1/zi4/m/n/10 "logical"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "integer"\T1/ptm/m/n
/10 , \T1/zi4/m/n/10 "numeric"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "complex"\T1/ptm/
m/n/10 ,
[291] [292] [293] [294]
Underfull \hbox (badness 4739) in paragraph at lines 19246--19248
[]\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere
d, see
[295] [296] [297] [298] [299] [300]
Underfull \hbox (badness 1596) in paragraph at lines 19665--19670
\T1/ptm/m/n/10 trix or, if \T1/zi4/m/n/10 simplify = "array"\T1/ptm/m/n/10 , an
 ar-ray if ap-pro-pri-ate, by ap-ply-ing \T1/zi4/m/n/10 simplify2array()\T1/ptm
/m/n/10 .
[301] [302] [303] [304] [305] [306] [307] [308] [309] [310] [311]
Underfull \hbox (badness 2469) in paragraph at lines 20269--20274
[]\T1/ptm/m/n/10 In late 2017 a \T1/zi4/m/n/10 libcurl \T1/ptm/m/n/10 in-stal-l
a-tion was seen di-vided into two li-braries, \T1/zi4/m/n/10 libcurl \T1/ptm/m/
n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 20283--20290
[][][]$\T1/zi4/m/n/10 http : / / curl . haxx . se / docs / sslcerts . html$[][]
 \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 http : / / curl . haxx . se / docs /
[312]
Underfull \hbox (badness 10000) in paragraph at lines 20357--20361
[]\T1/ptm/m/n/10 By de-fault \T1/zi4/m/n/10 R_LIBS \T1/ptm/m/n/10 is un-set, an
d \T1/zi4/m/n/10 R_LIBS_USER \T1/ptm/m/n/10 is set to di-rec-tory

Underfull \hbox (badness 2460) in paragraph at lines 20357--20361
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 R/\T1/ptm/m/sl/10 R.version$platform\T1/zi4/m/n/
10 -library/\T1/ptm/m/sl/10 x.y\T1/ptm/m/n/10 ' of the home di-rec-tory (or `\T
1/zi4/m/n/10 Library/R/\T1/ptm/m/sl/10 x.y\T1/zi4/m/n/10 /library\T1/ptm/m/n/10
 '
[313] [314]
Underfull \hbox (badness 1014) in paragraph at lines 20527--20532
[]\T1/ptm/m/n/10 Normally \T1/zi4/m/n/10 library \T1/ptm/m/n/10 re-turns (in-vi
s-i-bly) the list of at-tached pack-ages, but \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/1
0 or \T1/zi4/m/n/10 FALSE \T1/ptm/m/n/10 if
[315] [316] [317] [318] [319] [320] [321] [322] [323] [324] [325] [326]
Underfull \hbox (badness 1264) in paragraph at lines 21317--21322
[]\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways 
be sup-ported:
[327]
Underfull \hbox (badness 4441) in paragraph at lines 21346--21349
[]\T1/ptm/m/n/10 Note that set-ting cat-e-gory \T1/zi4/m/n/10 "LC_ALL" \T1/ptm/
m/n/10 sets only cat-e-gories \T1/zi4/m/n/10 "LC_COLLATE"\T1/ptm/m/n/10 , \T1/z
i4/m/n/10 "LC_CTYPE"\T1/ptm/m/n/10 ,
[328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338]
Underfull \hbox (badness 6047) in paragraph at lines 22093--22095
[]\T1/ptm/m/n/10 The al-go-rithm used by \T1/zi4/m/n/10 make.unique \T1/ptm/m/n
/10 has the prop-erty that \T1/zi4/m/n/10 make.unique(c(A,B)) ==
[339] [340] [341] [342] [343] [344] [345] [346] [347] [348] [349] [350]
[351] [352] [353] [354] [355]
Underfull \hbox (badness 1077) in paragraph at lines 23134--23140
\T1/zi4/m/n/10 / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm/m/n/10 , [][
]$\T1/zi4/m/n/10 http : / / tukaani . org / xz/$[][] \T1/ptm/m/n/10 and [][]$\T
1/zi4/m/n/10 https : / / en . wikipedia .
[356] [357] [358] [359] [360] [361] [362] [363]
Underfull \hbox (badness 2790) in paragraph at lines 23630--23633
[]\T1/zi4/m/n/10 packageStartupMessage \T1/ptm/m/n/10 is a vari-ant whose mes-s
ages can be sup-pressed sep-a-rately by

Underfull \hbox (badness 1571) in paragraph at lines 23630--23633
\T1/zi4/m/n/10 suppressPackageStartupMessages\T1/ptm/m/n/10 . (They are still m
es-sages, so can be sup-pressed by
[364] [365] [366] [367] [368]
Underfull \hbox (badness 1194) in paragraph at lines 23912--23915
[]\T1/ptm/m/n/10 The de-fault method for \T1/zi4/m/n/10 anyNA \T1/ptm/m/n/10 ha
n-dles atomic vec-tors with-out a class and \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 .
 It calls
[369] [370] [371]
Underfull \hbox (badness 2368) in paragraph at lines 24118--24124
[]\T1/ptm/m/n/10 For an [][]\T1/zi4/m/n/10 environment[][][] env\T1/ptm/m/n/10 
, \T1/zi4/m/n/10 names(env) \T1/ptm/m/n/10 gives the names of the cor-re-spond-
ing list, i.e.,

Underfull \hbox (badness 4981) in paragraph at lines 24118--24124
\T1/zi4/m/n/10 names(as.list(env,all.names = TRUE)) \T1/ptm/m/n/10 which are al
so given by [][]\T1/zi4/m/n/10 ls[][][](env,all.names =
[372] [373] [374] [375] [376] [377]
Underfull \hbox (badness 10000) in paragraph at lines 24500--24503
[]\T1/ptm/m/n/10 optional [][]\T1/zi4/m/n/10 logical[][][] \T1/ptm/m/n/10 even-
tu-ally to be passed to \T1/zi4/m/n/10 print()\T1/ptm/m/n/10 , used by
[378] [379] [380] [381] [382] [383] [384] [385] [386]
Underfull \hbox (badness 10000) in paragraph at lines 25105--25107
[]\T1/zi4/m/n/10 isNamespaceLoaded(pkg) \T1/ptm/m/n/10 is equiv-a-lent to but m
ore ef-fi-cient than \T1/zi4/m/n/10 pkg %in%
[387] [388] [389] [390] [391] [392] [393] [394] [395] [396] [397] [398]
[399]
Underfull \hbox (badness 1038) in paragraph at lines 25945--25953
[]\T1/ptm/m/n/10 the pack-ages that are at-tached by de-fault when \T1/phv/m/n/
10 R \T1/ptm/m/n/10 starts up. Ini-tially

Underfull \hbox (badness 1735) in paragraph at lines 25945--25953
\T1/ptm/m/n/10 set from value of the en-vi-ron-ment vari-able \T1/zi4/m/n/10 R_
DEFAULT_PACKAGES\T1/ptm/m/n/10 , or if that is un-

Underfull \hbox (badness 1292) in paragraph at lines 25945--25953
\T1/ptm/m/n/10 set to \T1/zi4/m/n/10 c("datasets","utils","grDevices","graphics
","stats","methods")\T1/ptm/m/n/10 . (Set

Underfull \hbox (badness 1881) in paragraph at lines 25954--25957
[]\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str
ucts which are

Underfull \hbox (badness 6220) in paragraph at lines 25973--25975
[]\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see

[400] [401]
Underfull \hbox (badness 2142) in paragraph at lines 26114--26118
[]\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][]\T1/zi4/m/n/10 postscr
ipt[][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able

Underfull \hbox (badness 1968) in paragraph at lines 26164--26169
[]\T1/ptm/m/n/10 the com-mand used by [][]\T1/zi4/m/n/10 postscript[][][] \T1/p
tm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able
[402] [403] [404] [405]
Underfull \hbox (badness 10000) in paragraph at lines 26452--26458
[]\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][]\T1/zi4/m/
n/10 setRepositories[][][]\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 26452--26458
\T1/ptm/m/n/10 e.g. the de-fault `\T1/zi4/m/n/10 "https://bioconductor.org"\T1/
ptm/m/n/10 ' or the Eu-ro-pean mir-ror

Underfull \hbox (badness 10000) in paragraph at lines 26452--26458
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de"\
T1/ptm/m/n/10 '. Can be set by

Underfull \hbox (badness 10000) in paragraph at lines 26465--26468
[]\T1/ptm/m/n/10 default Cc: ad-dress used by [][]\T1/zi4/m/n/10 create.post[][
][] \T1/ptm/m/n/10 (and hence[][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/n/10
 and

Underfull \hbox (badness 2689) in paragraph at lines 26491--26493
[]\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na
l HTTP server, see

Underfull \hbox (badness 10000) in paragraph at lines 26526--26531
[]\T1/ptm/m/n/10 Used by [][]\T1/zi4/m/n/10 install.packages[][][] \T1/ptm/m/n/
10 (and in-di-rectly

Underfull \hbox (badness 2529) in paragraph at lines 26532--26543
\T1/ptm/m/n/10 in-di-rectly [][]\T1/zi4/m/n/10 update.packages[][][]\T1/ptm/m/n
/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si-

Underfull \hbox (badness 2512) in paragraph at lines 26532--26543
\T1/ptm/m/n/10 ble val-ues are \T1/zi4/m/n/10 "never"\T1/ptm/m/n/10 , \T1/zi4/m
/n/10 "interactive" \T1/ptm/m/n/10 (which means ask in in-ter-ac-tive use and
[406]
Underfull \hbox (badness 7203) in paragraph at lines 26544--26547
[]\T1/ptm/m/n/10 default email-ing method used by [][]\T1/zi4/m/n/10 create.pos
t[][][] \T1/ptm/m/n/10 and hence [][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/
n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 26568--26573
[]\T1/zi4/m/n/10 "source" \T1/ptm/m/n/10 (the de-fault ex-cept un-der a CRAN ma
-cOS build),

Underfull \hbox (badness 2057) in paragraph at lines 26568--26573
\T1/zi4/m/n/10 "mac.binary.el-capitan" \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "both"
 \T1/ptm/m/n/10 (the de-fault for CRAN ma-cOS builds).
[407] [408] [409] [410] [411] [412] [413] [414]
Underfull \hbox (badness 10000) in paragraph at lines 27086--27089
[]\T1/zi4/m/n/10 str2expression(s) \T1/ptm/m/n/10 and \T1/zi4/m/n/10 str2lang(s
) \T1/ptm/m/n/10 re-turn spe-cial ver-sions of
[415]
Underfull \hbox (badness 7925) in paragraph at lines 27165--27169
[]\T1/ptm/m/n/10 for a [][]\T1/zi4/m/n/10 character[][][] \T1/ptm/m/n/10 vec-to
r \T1/zi4/m/n/10 s\T1/ptm/m/n/10 , \T1/zi4/m/n/10 str2expression(s) \T1/ptm/m/n
/10 cor-re-sponds to

Underfull \hbox (badness 1622) in paragraph at lines 27165--27169
[][]\T1/zi4/m/n/10 parse[][][](text = s,keep.source=FALSE)\T1/ptm/m/n/10 , whic
h is al-ways of type ([][]\T1/zi4/m/n/10 typeof[][][]\T1/ptm/m/n/10 ) and [][]\
T1/zi4/m/n/10 class[][][]

Underfull \hbox (badness 6125) in paragraph at lines 27170--27179
[]\T1/ptm/m/n/10 for a [][]\T1/zi4/m/n/10 character[][][] \T1/ptm/m/n/10 string
 \T1/zi4/m/n/10 s\T1/ptm/m/n/10 , \T1/zi4/m/n/10 str2lang(s) \T1/ptm/m/n/10 cor
-re-sponds to [][]\T1/zi4/m/n/10 parse[][][](text =
[416] [417] [418] [419] [420] [421] [422] [423] [424] [425] [426]
Underfull \hbox (badness 2726) in paragraph at lines 27891--27894
[]\T1/ptm/m/n/10 character string (or \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 ) in-di
-cat-ing [][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 val-ues in printed out-put,
 see
[427] [428] [429] [430] [431] [432] [433] [434] [435] [436] [437] [438]
[439] [440] [441] [442] [443] [444]
Underfull \vbox (badness 3803) has occurred while \output is active [445]
[446] [447] [448] [449] [450] [451] [452]
Underfull \hbox (badness 1533) in paragraph at lines 29582--29585
[]\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca
n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the
[453] [454] [455]
Underfull \hbox (badness 1163) in paragraph at lines 29745--29756
[]\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no \T1/zi4/m/n/10 NA\
T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in
[456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467]
[468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479]
Underfull \hbox (badness 10000) in paragraph at lines 31291--31295
[]\T1/zi4/m/n/10 regexpr \T1/ptm/m/n/10 and \T1/zi4/m/n/10 gregexpr \T1/ptm/m/n
/10 sup-port `named cap-ture'. If groups are named, e.g.,

Underfull \hbox (badness 1221) in paragraph at lines 31291--31295
\T1/zi4/m/n/10 "(?<first>[A-Z][a-z]+)" \T1/ptm/m/n/10 then the po-si-tions of t
he matches are also re-turned by name.

Underfull \hbox (badness 6188) in paragraph at lines 31313--31315
[]\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 http : / / p
ubs . opengroup . org / onlinepubs / 9699919799 /
[480] [481] [482] [483] [484] [485] [486] [487] [488]
Underfull \hbox (badness 1655) in paragraph at lines 31869--31871
[]\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for \T1/zi4/m/n/10 rle()\T1/ptm
/m/n/10 ; an ob-ject of class \T1/zi4/m/n/10 "rle" \T1/ptm/m/n/10 for
[489] [490] [491] [492] [493] [494] [495] [496] [497] [498] [499] [500]
[501] [502] [503] [504] [505]
Underfull \hbox (badness 2261) in paragraph at lines 32988--32993
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 strip.white \T1/ptm/m/n/10 is of length 1, i
t ap-plies to all fields; oth-er-wise, if
[506]
Underfull \hbox (badness 10000) in paragraph at lines 33015--33021
[]\T1/ptm/m/n/10 The es-capes which are in-ter-preted are the con-trol char-ac-
ters

Underfull \hbox (badness 1484) in paragraph at lines 33015--33021
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 \a,\b,\f,\n,\r,\t,\v\T1/ptm/m/n/10 ' and oc-tal 
and hex-adec-i-mal rep-re-sen-ta-tions like
[507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518]
[519] [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530]
[531] [532] [533] [534] [535] [536] [537] [538] [539] [540] [541] [542]
[543] [544] [545] [546] [547] [548] [549] [550] [551] [552] [553] [554]
Underfull \hbox (badness 1072) in paragraph at lines 36157--36161
[]\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea
d from the file spec-i-fied by

Underfull \hbox (badness 10000) in paragraph at lines 36162--36166
[]\T1/ptm/m/n/10 The command-line op-tion `\T1/zi4/m/n/10 --vanilla\T1/ptm/m/n/
10 ' im-plies `\T1/zi4/m/n/10 --no-site-file\T1/ptm/m/n/10 ', `\T1/zi4/m/n/10 -
-no-init-file\T1/ptm/m/n/10 ',

Underfull \hbox (badness 10000) in paragraph at lines 36190--36196
[]\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file
s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 '

Underfull \hbox (badness 10000) in paragraph at lines 36190--36196
\T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for
 first in architecture-specific di-rec-to-ries,

Underfull \hbox (badness 1320) in paragraph at lines 36190--36196
\T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R
environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/
n/10 ' will be used in

Underfull \hbox (badness 3009) in paragraph at lines 36202--36209
[]\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is 
also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt
m/m/n/10 ' which is read

Underfull \hbox (badness 1038) in paragraph at lines 36202--36209
\T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron-
ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the

Underfull \hbox (badness 2573) in paragraph at lines 36202--36209
\T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i
n site or user en-vi-ron-ment

Underfull \hbox (badness 1917) in paragraph at lines 36202--36209
\T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/
n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from
[555] [556] [557] [558] [559] [560]
Underfull \hbox (badness 1142) in paragraph at lines 36556--36562
[]\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the \T1/zi4/m/n/10 form
at \T1/ptm/m/n/10 meth-ods is \T1/zi4/m/n/10 "%Y-%m-%d
[561] [562] [563] [564] [565] [566] [567] [568] [569] [570] [571] [572]
[573] [574] [575] [576] [577] [578] [579] [580]
Underfull \hbox (badness 1565) in paragraph at lines 37829--37831
[]\T1/ptm/m/n/10 integer code used in \T1/zi4/m/n/10 quantile(*,type=quantile.t
ype) \T1/ptm/m/n/10 for the de-fault
[581] [582] [583] [584] [585] [586] [587] [588] [589] [590]
Underfull \hbox (badness 4967) in paragraph at lines 38428--38433
[]\T1/ptm/m/n/10 If a file-name starts with \T1/zi4/m/n/10 . \T1/ptm/m/n/10 thi
s may need to be matched ex-plic-itly: for ex-am-ple
[591] [592]
Underfull \hbox (badness 1616) in paragraph at lines 38541--38546
\T1/zi4/m/n/10 system("id") \T1/ptm/m/n/10 is much more portable on Unix-alikes
, pro-vided only the POSIX op-tions
[593] [594] [595] [596] [597] [598] [599] [600]
Underfull \hbox (badness 1472) in paragraph at lines 39067--39070
[]\T1/ptm/m/n/10 logical. If \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , func-tions kee
p their source in-clud-ing com-ments, see
[601] [602] [603] [604] [605] [606] [607] [608] [609] [610] [611] [612]
[613] [614]
Underfull \hbox (badness 10000) in paragraph at lines 39981--39985
[]\T1/ptm/m/n/10 On 64-bit plat-forms \T1/zi4/m/n/10 bin \T1/ptm/m/n/10 can hav
e $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., \T1/zi4/m/n/10
 length(bin) >
[615] [616] [617] [618]
Underfull \hbox (badness 10000) in paragraph at lines 40232--40235
[][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [
][]$https : / / developer . r-[]project . org /
[619] [620] [621]
Underfull \hbox (badness 10000) in paragraph at lines 40416--40420
[][][]\T1/zi4/m/n/10 addTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 r
emoveTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 taskCallbackManager[
][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer .
[622] [623] [624] [625] [626] [627] [628] [629] [630]
Underfull \hbox (badness 10000) in paragraph at lines 41029--41032
[][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][
] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[
]zones /
[631] [632] [633] [634] [635] [636]
Underfull \vbox (badness 10000) has occurred while \output is active [637]
[638] [639] [640] [641] [642] [643] [644]
Underfull \hbox (badness 1990) in paragraph at lines 41933--41941
[]\T1/zi4/m/n/10 try \T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any e
r-rors that oc-cur dur-ing the eval-u-a-tion. If

Underfull \hbox (badness 4846) in paragraph at lines 41933--41941
\T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][
]\T1/zi4/m/n/10 stderr[][][] \T1/ptm/m/n/10 con-nec-tion un-less
[645] [646] [647] [648] [649] [650] [651] [652]
Underfull \hbox (badness 1917) in paragraph at lines 42439--42446
[]\T1/ptm/m/n/10 When a func-tion call-ing \T1/zi4/m/n/10 UseMethod("fun") \T1/
ptm/m/n/10 is ap-plied to an ob-ject with class at-tribute
[653] [654] [655] [656] [657] [658] [659] [660] [661] [662] [663]
Underfull \hbox (badness 3668) in paragraph at lines 43168--43170
[]\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di-
ately, even if
[664] [665]
Underfull \hbox (badness 2401) in paragraph at lines 43296--43300
[]\T1/ptm/m/n/10 See the de-scrip-tion of [][]\T1/zi4/m/n/10 options[][][]("war
n") \T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a
[666] [667] [668]
Underfull \hbox (badness 2111) in paragraph at lines 43485--43490
\T1/ptm/m/n/10 If [][]\T1/zi4/m/n/10 names[][][](.dimnames) \T1/ptm/m/n/10 is n
ot empty, these are used as col-umn names.

Underfull \hbox (badness 10000) in paragraph at lines 43506--43511
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 arr.ind == TRUE \T1/ptm/m/n/10 and \T1/zi4/m
/n/10 x \T1/ptm/m/n/10 is an [][]\T1/zi4/m/n/10 array[][][] \T1/ptm/m/n/10 (has
 a [][]\T1/zi4/m/n/10 dim[][][] \T1/ptm/m/n/10 at-tribute), the re-sult is
[669] [670] [671] [672] [673] [674] [675] [676] [677]
Underfull \hbox (badness 5417) in paragraph at lines 44088--44092
[]\T1/zi4/m/n/10 .packages() \T1/ptm/m/n/10 re-turns the names of the cur-rentl
y at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas
[678]
Underfull \hbox (badness 10000) in paragraph at lines 44149--44153
[]\T1/zi4/m/n/10 .standard_regexps \T1/ptm/m/n/10 re-turns a list of `stan-dard
' reg-exps, in-clud-ing el-e-ments named
[679] [680]) (./compiler-pkg.tex
Chapter 2.
[681] [682] [683] [684]) (./datasets-pkg.tex
Chapter 3.
[685] [686] [687] [688] [689] [690] [691] [692] [693] [694] [695] [696]
[697] [698] [699] [700] [701]
Underfull \hbox (badness 1097) in paragraph at lines 1031--1035
[]\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th
e iden-ti-fi-ca-tion of crim-i-nals.
[702] [703] [704] [705] [706] [707] [708] [709] [710] [711] [712] [713]
[714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724]
Underfull \vbox (badness 1448) has occurred while \output is active [725]
[726] [727] [728] [729] [730] [731] [732] [733] [734] [735] [736]
Overfull \vbox (19.74611pt too high) has occurred while \output is active
[737] [738] [739] [740] [741] [742] [743] [744] [745] [746] [747] [748]
[749] [750] [751] [752]
Underfull \vbox (badness 10000) has occurred while \output is active [753]
[754] [755] [756]
Underfull \vbox (badness 10000) has occurred while \output is active [757]
[758] [759] [760] [761] [762] [763] [764] [765] [766]) (./grDevices-pkg.tex
Chapter 4.
[767] [768] [769] [770] [771]
Underfull \hbox (badness 3158) in paragraph at lines 282--286
[]\T1/ptm/m/n/10 numeric vec-tor of length 3, \T1/zi4/m/n/10 c(mi,ma,n.)\T1/ptm
/m/n/10 , with iden-ti-cal mean-ing to

Underfull \hbox (badness 10000) in paragraph at lines 298--303
[]\T1/ptm/m/n/10 Apart from that, [][]\T1/zi4/m/n/10 axisTicks[][][]() \T1/ptm/
m/n/10 just calls the C func-tion \T1/zi4/m/n/10 CreateAtVector() \T1/ptm/m/n/1
0 in

Underfull \hbox (badness 1852) in paragraph at lines 298--303
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 <Rsrc>/src/main/plot.c\T1/ptm/m/n/10 ' which is 
also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t
ion
[772] [773] [774] [775] [776] [777] [778] [779]
Underfull \hbox (badness 1424) in paragraph at lines 830--832
[][][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) and 
\T1/zi4/m/n/10 "NA" \T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i
-fied as
[780] [781] [782] [783] [784]
Underfull \hbox (badness 5175) in paragraph at lines 1124--1126
[]\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm
. The source code is in
[785] [786] [787] [788]
Underfull \hbox (badness 1852) in paragraph at lines 1326--1329
[]\T1/zi4/m/n/10 densCols \T1/ptm/m/n/10 com-putes and re-turns the set of col-
ors that will be used in plot-ting, call-ing
[789] [790] [791]
Underfull \hbox (badness 1490) in paragraph at lines 1532--1537
\T1/ptm/m/n/10 by [][]\T1/zi4/m/n/10 rasterImage[][][] \T1/ptm/m/n/10 and [][]\
T1/zi4/m/n/10 grid.raster[][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues \T1/zi4/m/n/
10 "no"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "yes" \T1/ptm/m/n/10 and
[792] [793] [794] [795] [796] [797]
Underfull \hbox (badness 1325) in paragraph at lines 1938--1948
\T1/zi4/m/n/10 "png48"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pngmono"\T1/ptm/m/n/10 ,
 \T1/zi4/m/n/10 "pnggray"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pngalpha"\T1/ptm/m/n/
10 , \T1/zi4/m/n/10 "bmp16"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "bmp16m" "bmp256"\T1
/ptm/m/n/10 , \T1/zi4/m/n/10 "bmp32b"\T1/ptm/m/n/10 ,
[798] [799]
Underfull \hbox (badness 10000) in paragraph at lines 2050--2052
[]\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the 
set-ting of
[800] [801] [802]
Underfull \hbox (badness 6758) in paragraph at lines 2228--2231
[]\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript
 doc-u-men-ta-tion) are
[803] [804] [805] [806] [807] [808] [809] [810] [811] [812]
Underfull \hbox (badness 10000) in paragraph at lines 2832--2833

[813] [814] [815] [816] [817] [818] [819] [820] [821]
Underfull \hbox (badness 10000) in paragraph at lines 3388--3393
[]\T1/zi4/m/n/10 nclass.FD \T1/ptm/m/n/10 uses the Freedman-Diaconis choice bas
ed on the inter-quartile range
[822] [823] [824] [825] [826]
Underfull \vbox (badness 10000) has occurred while \output is active [827]
Underfull \hbox (badness 10000) in paragraph at lines 3789--3792
[]\T1/ptm/m/n/10 For use with \T1/zi4/m/n/10 onefile = FALSE \T1/ptm/m/n/10 giv
e a C in-te-ger for-mat such as
[828] [829] [830] [831] [832] [833] [834] [835] [836] [837] [838]
Underfull \hbox (badness 10000) in paragraph at lines 4518--4523
[][][]$\T1/zi4/m/n/10 https : / / www . adobe . com / content / dam / acom / en
 / devnet / actionscript / articles / PLRM . pdf$[][]

Underfull \hbox (badness 4181) in paragraph at lines 4518--4523
\T1/ptm/m/n/10 or PDF [][]$\T1/zi4/m/n/10 https : / / www . adobe . com / devne
t / acrobat / pdfs / pdf _ reference _ 1-[]7 . pdf$[][] \T1/ptm/m/n/10 and in
[839]
Underfull \vbox (badness 10000) has occurred while \output is active [840]
[841]
Underfull \hbox (badness 1067) in paragraph at lines 4672--4679
\T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled
 with sup-
[842] [843] [844] [845]
Underfull \hbox (badness 1377) in paragraph at lines 4975--4980
[]\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently 
al-lowed val-ues
[846]
Underfull \hbox (badness 1418) in paragraph at lines 5051--5058
\T1/ptm/m/n/10 it is one of \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4
/m/n/10 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/
zi4/m/n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm
/m/n/10 ,

Underfull \hbox (badness 1755) in paragraph at lines 5069--5071
[]\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East 
Asian lan-guages -- see
[847] [848]
Underfull \hbox (badness 1377) in paragraph at lines 5180--5185
[]\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are \
T1/zi4/m/n/10 "rgb" \T1/ptm/m/n/10 (which is RGB+gray) and
[849]
Underfull \hbox (badness 7344) in paragraph at lines 5249--5251
[]\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t
ion by Brian D'Urso
[850] [851]
Underfull \hbox (badness 2035) in paragraph at lines 5384--5393
[]\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv
-a-lents) are also pro-

Underfull \hbox (badness 10000) in paragraph at lines 5384--5393
\T1/ptm/m/n/10 vided: \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/zi4/m/
n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm/m/n/1
0 ,

Underfull \hbox (badness 10000) in paragraph at lines 5384--5393
\T1/zi4/m/n/10 "NewCenturySchoolbook"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Palatino"
 \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "Times"\T1/ptm/m/n/10 ; \T1/zi4/m/n/10 "URWG
othic"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "URWBookman"\T1/ptm/m/n/10 ,
[852]
Underfull \hbox (badness 10000) in paragraph at lines 5452--5459
[]\T1/zi4/m/n/10 BousungEG-Light-GB \T1/ptm/m/n/10 can be found at [][]$\T1/zi4
/m/n/10 ftp : / / ftp . gnu . org / pub / non-[]gnu /

Underfull \hbox (badness 2189) in paragraph at lines 5452--5459
\T1/zi4/m/n/10 chinese-[]fonts-[]truetype/$[][]\T1/ptm/m/n/10 . Ken Lunde's CJK
V re-sources are at [][]$\T1/zi4/m/n/10 ftp : / / ftp . oreilly .
[853] [854] [855]
Underfull \hbox (badness 1546) in paragraph at lines 5594--5602
[]\T1/ptm/m/n/10 arguments \T1/zi4/m/n/10 onefile\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 family\T1/ptm/m/n/10 , \T1/zi4/m/n/10 title\T1/ptm/m/n/10 , \T1/zi4/m/n/10 fo
nts\T1/ptm/m/n/10 , \T1/zi4/m/n/10 encoding\T1/ptm/m/n/10 , \T1/zi4/m/n/10 bg\T
1/ptm/m/n/10 , \T1/zi4/m/n/10 fg\T1/ptm/m/n/10 , \T1/zi4/m/n/10 width\T1/ptm/m/
n/10 ,
[856] [857] [858] [859] [860] [861] [862] [863]
Underfull \hbox (badness 10000) in paragraph at lines 6129--6132
[]\T1/zi4/m/n/10 rgb2hsv \T1/ptm/m/n/10 trans-forms col-ors from RGB space (red
/green/blue) into HSV space
[864] [865] [866] [867] [868] [869] [870] [871] [872] [873] [874] [875]
[876]
Underfull \hbox (badness 1189) in paragraph at lines 6951--6953
[]\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used
. One of
[877]
Underfull \hbox (badness 10000) in paragraph at lines 7049--7051
[]\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" \T1/ptm/m/n/10 for CJK 
lan-guages and
[878] [879] [880] [881] [882]
Underfull \hbox (badness 3780) in paragraph at lines 7349--7355
[]\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of \T1/zi4/m/n/1
0 "AvantGarde"\T1/ptm/m/n/10 ,
[883] [884] [885]
Underfull \hbox (badness 2680) in paragraph at lines 7550--7552
[]\T1/ptm/m/n/10 multiplicities (pos-i-tive in-te-gers); i.e., \T1/zi4/m/n/10 n
umber[i] \T1/ptm/m/n/10 is the mul-ti-plic-ity of
[886] [887] [888]) (./graphics-pkg.tex
Chapter 5.
[889] [890] [891] [892] [893] [894] [895] [896] [897] [898] [899] [900]
[901] [902] [903] [904] [905] [906] [907] [908] [909] [910]
Underfull \hbox (badness 4634) in paragraph at lines 1351--1354
[][][]\T1/zi4/m/n/10 boxplot.default[][][] \T1/ptm/m/n/10 which al-ready works 
nowa-days with data.frames; [][]\T1/zi4/m/n/10 boxplot.formula[][][]\T1/ptm/m/n
/10 ,
[911] [912] [913] [914] [915] [916] [917] [918] [919] [920] [921] [922]
[923] [924] [925] [926]
Underfull \hbox (badness 1728) in paragraph at lines 2308--2310
[]\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use \T1/zi4/m/n/10 "n
" \T1/ptm/m/n/10 to sup-press and see also
[927] [928]
Underfull \hbox (badness 1009) in paragraph at lines 2399--2406
\T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n
ot ap-ply to
[929] [930] [931] [932] [933] [934] [935] [936] [937] [938] [939] [940]
[941] [942] [943] [944] [945] [946] [947] [948] [949] [950]
Underfull \vbox (badness 10000) has occurred while \output is active [951]
[952] [953] [954] [955] [956] [957] [958] [959] [960] [961] [962] [963]
Underfull \hbox (badness 3229) in paragraph at lines 4544--4549
[]\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are 
to be used, see
[964] [965] [966] [967] [968]
Underfull \hbox (badness 10000) in paragraph at lines 4901--4907
[]\T1/ptm/b/it/10 R.O.\T1/ptm/m/n/10 ; size of de-fault char-ac-ter \T1/zi4/m/n
/10 (width,height) \T1/ptm/m/n/10 in user co-or-di-nate units.

Underfull \hbox (badness 5908) in paragraph at lines 4901--4907
\T1/zi4/m/n/10 par("cxy") \T1/ptm/m/n/10 is \T1/zi4/m/n/10 par("cin")/par("pin"
) \T1/ptm/m/n/10 scaled to user co-or-di-nates. Note that
[969]
Underfull \hbox (badness 10000) in paragraph at lines 5032--5035

[970]
Underfull \hbox (badness 10000) in paragraph at lines 5093--5095

[971 </<<PKGBUILDDIR>>/library/graphics/help/figures/
mai.pdf>] [972 </<<PKGBUILDDIR>>/library/graphics/hel
p/figures/oma.pdf>] [973]
Underfull \hbox (badness 10000) in paragraph at lines 5283--5285
[]\T1/ptm/m/n/10 The five stan-dard dash-dot line types (\T1/zi4/m/n/10 lty = 2
:6\T1/ptm/m/n/10 ) cor-re-spond to
[974]
Underfull \vbox (badness 3803) has occurred while \output is active [975]
[976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987]
[988] [989] [990] [991] [992] [993] [994] [995] [996]
Overfull \hbox (31.57222pt too wide) in paragraph at lines 6761--6762
[][] 
[997] [998 </<<PKGBUILDDIR>>/library/graphics/help/fi
gures/pch.pdf>] [999] [1000] [1001] [1002] [1003] [1004] [1005] [1006] [1007]
[1008] [1009] [1010]
Underfull \hbox (badness 2012) in paragraph at lines 7586--7589
[]\T1/ptm/m/n/10 For each \T1/zi4/m/n/10 i\T1/ptm/m/n/10 , a line seg-ment is d
rawn be-tween the point \T1/zi4/m/n/10 (x0[i],y0[i]) \T1/ptm/m/n/10 and the poi
nt
[1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021]
[1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031]
Underfull \hbox (badness 10000) in paragraph at lines 8846--8848
[]\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color

Underfull \hbox (badness 10000) in paragraph at lines 8848--8850
[]\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color
[1032]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.uni
ts}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.8928 \HeaderA{units}{Graphical Units}{units}
                                               [1033] [1034] [1035] [1036])
(./grid-pkg.tex
Chapter 6.

Underfull \vbox (badness 10000) has occurred while \output is active [1037]
[1038] [1039] [1040] [1041] [1042] [1043] [1044]
Underfull \hbox (badness 2680) in paragraph at lines 483--486
[]\T1/ptm/m/n/10 Note that \T1/zi4/m/n/10 preDrawDetails \T1/ptm/m/n/10 and \T1
/zi4/m/n/10 postDrawDetails \T1/ptm/m/n/10 are also called in the cal-cu-la-tio
n of
[1045] [1046] [1047] [1048] [1049] [1050] [1051] [1052] [1053] [1054]
Underfull \hbox (badness 4279) in paragraph at lines 1064--1073
[][][]\T1/ptm/m/n/10 Grid[][][], [][]\T1/zi4/m/n/10 pushViewport[][][]\T1/ptm/m
/n/10 , [][]\T1/zi4/m/n/10 popViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10
 downViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 seekViewport[][][]\T1/pt
m/m/n/10 , [][]\T1/zi4/m/n/10 upViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/
10 unit[][][]\T1/ptm/m/n/10 ,
[1055] [1056] [1057] [1058] [1059] [1060] [1061] [1062] [1063] [1064] [1065]
[1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] [1076]
[1077] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087]
[1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098]
Underfull \vbox (badness 10000) has occurred while \output is active [1099]
[1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110]
[1111] [1112]
Underfull \hbox (badness 1067) in paragraph at lines 4486--4489
[]\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec
t de-scrib-ing seg-ments), but only
[1113] [1114] [1115] [1116]
Underfull \hbox (badness 7256) in paragraph at lines 4731--4733
[]\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject
s are co-erced by
[1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] [1127]
[1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] [1137] [1138]
[1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147]
Underfull \hbox (badness 1824) in paragraph at lines 6535--6538
[]\T1/ptm/m/n/10 This can be use-ful for re-turn-ing to your start-ing point by
 do-ing some-thing like \T1/zi4/m/n/10 depth
[1148] [1149] [1150] [1151]) (./methods-pkg.tex [1152]
Chapter 7.
[1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160]
Underfull \vbox (badness 10000) has occurred while \output is active [1161]
Underfull \vbox (badness 10000) has occurred while \output is active [1162]
[1163] [1164] [1165] [1166] [1167] [1168] [1169] [1170] [1171]
Underfull \hbox (badness 2237) in paragraph at lines 1385--1387
[]\T1/ptm/m/n/10 The class \T1/zi4/m/n/10 "className" \T1/ptm/m/n/10 ex-tends \
T1/zi4/m/n/10 "character" \T1/ptm/m/n/10 and has a slot \T1/zi4/m/n/10 "package
"\T1/ptm/m/n/10 , also of class
[1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179]
Underfull \hbox (badness 2181) in paragraph at lines 1932--1939
[]\T1/ptm/m/n/10 Two vir-tual classes are sup-plied to test for ref-er-ence ob-
jects: \T1/zi4/m/n/10 is(x,"refClass") \T1/ptm/m/n/10 tests
[1180]
Underfull \hbox (badness 10000) in paragraph at lines 1981--1986
[]\T1/ptm/m/n/10 The ar-gu-ment to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/10 c
an be an ob-ject of class

Underfull \hbox (badness 1038) in paragraph at lines 1981--1986
\T1/ptm/m/n/10 file name is passed to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/1
0 it calls \T1/zi4/m/n/10 evalSource \T1/ptm/m/n/10 to ob-tain the
[1181] [1182] [1183]
Underfull \hbox (badness 2213) in paragraph at lines 2214--2219
[]\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age
, use \T1/zi4/m/n/10 where =
[1184] [1185] [1186] [1187] [1188]
Underfull \hbox (badness 10000) in paragraph at lines 2574--2577
[]\T1/ptm/m/n/10 As you might ex-pect [][]\T1/zi4/m/n/10 setGeneric[][][] \T1/p
tm/m/n/10 and [][]\T1/zi4/m/n/10 setGroupGeneric[][][] \T1/ptm/m/n/10 cre-ate o
b-jects of class
[1189] [1190]
Underfull \hbox (badness 1132) in paragraph at lines 2714--2718
[]\T1/ptm/m/n/10 In \T1/zi4/m/n/10 getGenerics\T1/ptm/m/n/10 , if \T1/zi4/m/n/1
0 TRUE\T1/ptm/m/n/10 , the \T1/zi4/m/n/10 package \T1/ptm/m/n/10 slot of the re
-turned re-sult is in
[1191]
Underfull \hbox (badness 1033) in paragraph at lines 2746--2751
\T1/ptm/m/n/10 In ad-di-tion, \T1/zi4/m/n/10 removeGeneric \T1/ptm/m/n/10 re-mo
ves the func-tion it-self; \T1/zi4/m/n/10 removeMethods \T1/ptm/m/n/10 re-store
s the
[1192] [1193] [1194] [1195] [1196] [1197] [1198]
Underfull \hbox (badness 1102) in paragraph at lines 3303--3305
[]\T1/zi4/m/n/10 getPackageName \T1/ptm/m/n/10 re-turns the character-string na
me of the pack-age (with-out the ex-tra-ne-ous
[1199] [1200] [1201] [1202] [1203]
Underfull \hbox (badness 10000) in paragraph at lines 3634--3639
[]\T1/ptm/m/n/10 The \T1/zi4/m/n/10 initialize \T1/ptm/m/n/10 method for these 
classes takes spe-cial ar-gu-ments
[1204]
Underfull \hbox (badness 10000) in paragraph at lines 3642--3651
[]\T1/ptm/m/n/10 The
[1205]
Underfull \hbox (badness 10000) in paragraph at lines 3762--3763
[] \T1/zi4/m/n/10 Pos <-setClass("Pos",slots = c(latitude = "numeric",longitude
 = "numeric",altitude
[1206] [1207] [1208] [1209] [1210] [1211] [1212] [1213] [1214] [1215] [1216]
Underfull \hbox (badness 1769) in paragraph at lines 4472--4478
[]\T1/ptm/m/n/10 class [][]\T1/zi4/m/n/10 MethodsList[][][] \T1/ptm/m/n/10 for 
the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar

Underfull \hbox (badness 1939) in paragraph at lines 4472--4478
\T1/zi4/m/n/10 MethodDefinition\T1/ptm/m/n/10 , or an ex-ten-sion. Class [][]\T
1/zi4/m/n/10 MethodWithNext[][][] \T1/ptm/m/n/10 for an ex-ten-sion used by
[1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226]
Underfull \vbox (badness 10000) has occurred while \output is active [1227]
[1228] [1229]
Underfull \hbox (badness 4036) in paragraph at lines 5437--5440
[]\T1/ptm/m/n/10 Object of class \T1/zi4/m/n/10 "PossibleMethod" \T1/ptm/m/n/10
 the method to use in re-sponse to a
[1230]
Underfull \hbox (badness 3803) in paragraph at lines 5512--5514
[]\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p
assed to
[1231] [1232] [1233] [1234]
Underfull \hbox (badness 1087) in paragraph at lines 5744--5749
[]\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o
ds for this class are found (us-ing
[1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242]
Underfull \hbox (badness 1675) in paragraph at lines 6451--6457
\T1/ptm/m/n/10 can be con-verted ex-plic-itly as \T1/zi4/m/n/10 externalRefMeth
od(f)\T1/ptm/m/n/10 , which re-turns an ob-ject of class
[1243] [1244] [1245] [1246]
Underfull \vbox (badness 10000) has occurred while \output is active [1247]
[1248] [1249] [1250]pdfTeX warning (ext4): destination with the same identifier
 (name{Rfn.S4}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.6973 \aliasA{S4}{S3Part}{S4}
                               [1251] [1252] [1253]pdfTeX warning (ext4): desti
nation with the same identifier (name{Rfn.Complex}) has been already used, dupl
icate ignored
<to be read again> 
                   \relax 
l.7229 \aliasA{Complex}{S4groupGeneric}{Complex}
                                                pdfTeX warning (ext4): destinat
ion with the same identifier (name{Rfn.Logic}) has been already used, duplicate
 ignored
<to be read again> 
                   \relax 
l.7231 \aliasA{Logic}{S4groupGeneric}{Logic}
                                            pdfTeX warning (ext4): destination 
with the same identifier (name{Rfn.Math}) has been already used, duplicate igno
red
<to be read again> 
                   \relax 
l.7232 \aliasA{Math}{S4groupGeneric}{Math}
                                          pdfTeX warning (ext4): destination wi
th the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored

<to be read again> 
                   \relax 
l.7234 \aliasA{Ops}{S4groupGeneric}{Ops}
                                        pdfTeX warning (ext4): destination with
 the same identifier (name{Rfn.Summary}) has been already used, duplicate ignor
ed
<to be read again> 
                   \relax 
l.7235 \aliasA{Summary}{S4groupGeneric}{Summary}
                                                 [1254]
Underfull \hbox (badness 2050) in paragraph at lines 7296--7300
[]\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic 
can be ob-tained by call-ing
[1255] [1256] [1257]
Underfull \hbox (badness 1286) in paragraph at lines 7484--7486
[]\T1/ptm/m/n/10 for \T1/zi4/m/n/10 .selectSuperClasses() \T1/ptm/m/n/10 only, 
a [][]\T1/zi4/m/n/10 list[][][] \T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cal
ly
[1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] [1266] [1267] [1268]
[1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] [1279]
[1280] [1281] [1282] [1283] [1284]
Underfull \vbox (badness 10000) has occurred while \output is active [1285]
[1286] [1287] [1288] [1289] [1290] [1291] [1292]
Underfull \hbox (badness 1137) in paragraph at lines 10011--10019
[]\T1/ptm/m/n/10 Objects can be cre-ated by calls of the form \T1/zi4/m/n/10 ne
w("signature",functionDef,...)\T1/ptm/m/n/10 . The
[1293] [1294] [1295] [1296] [1297] [1298] [1299]
Underfull \hbox (badness 1852) in paragraph at lines 10564--10568
[]\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl
ass, from the data part; e.g.,
[1300] [1301] [1302] [1303]) (./parallel-pkg.tex [1304]
Chapter 8.

Underfull \hbox (badness 5490) in paragraph at lines 14--16
[]\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `\T1/zi4
/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"\T1/ptm/m/n/10 ' [][]RNG[
][][]: see
[1305] [1306] [1307] [1308] [1309] [1310] [1311] [1312] [1313] [1314] [1315]
[1316] [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325]
Underfull \hbox (badness 3386) in paragraph at lines 1365--1368
[]\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by \T1/zi4/m/n/10 .R
andom.seed \T1/ptm/m/n/10 when the
[1326] [1327] [1328]) (./splines-pkg.tex
Chapter 9.

Underfull \hbox (badness 10000) in paragraph at lines 22--24
[]\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 <bates@stat.wisc.edu> \T1/ptm/
m/n/10 and William N. Ven-ables
[1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] [1338] [1339]
[1340] [1341] [1342] [1343] [1344]) (./stats-pkg.tex
Chapter 10.
[1345] [1346] [1347] [1348] [1349] [1350] [1351] [1352] [1353] [1354] [1355]
[1356] [1357] [1358]
Underfull \hbox (badness 1412) in paragraph at lines 875--877
[]\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from \T1/zi4/m/n/10 lm 
\T1/ptm/m/n/10 or \T1/zi4/m/n/10 aov\T1/ptm/m/n/10 , or a for-mula for
[1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366]
Underfull \hbox (badness 2503) in paragraph at lines 1356--1359
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1367] [1368] [1369]
Underfull \hbox (badness 10000) in paragraph at lines 1536--1540
[]\T1/ptm/m/n/10 An ob-ject of class \T1/zi4/m/n/10 c("aov","lm") \T1/ptm/m/n/1
0 or for mul-ti-ple re-sponses of class
[1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] [1379] [1380]
[1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391]
[1392] [1393] [1394] [1395] [1396] [1397] [1398] [1399]
Underfull \hbox (badness 2503) in paragraph at lines 3437--3440
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1400] [1401] [1402] [1403] [1404] [1405] [1406] [1407] [1408] [1409] [1410]
[1411] [1412] [1413] [1414]
Underfull \hbox (badness 1127) in paragraph at lines 4351--4354
[]\T1/ptm/m/n/10 standardized resid-u-als, \T1/zi4/m/n/10 (observed -expected) 
/ sqrt(V)\T1/ptm/m/n/10 , where \T1/zi4/m/n/10 V \T1/ptm/m/n/10 is the
[1415] [1416] [1417] [1418] [1419]
Underfull \hbox (badness 3989) in paragraph at lines 4681--4688
[]\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 
(\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/
it/10 g[] \OT1/cmr/m/n/10 =
[1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] [1428] [1429]
Underfull \hbox (badness 2556) in paragraph at lines 5317--5320
[]\T1/ptm/m/n/10 character; par-tially matched to \T1/zi4/m/n/10 "circular"\T1/
ptm/m/n/10 , \T1/zi4/m/n/10 "open"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "filter"\T1/p
tm/m/n/10 . For

Underfull \hbox (badness 2932) in paragraph at lines 5334--5336
[]\T1/ptm/m/n/10 Note that the usual def-i-ni-tion of con-vo-lu-tion of two se-
quences \T1/zi4/m/n/10 x \T1/ptm/m/n/10 and \T1/zi4/m/n/10 y \T1/ptm/m/n/10 is 
given by
[1430] [1431] [1432] [1433] [1434] [1435] [1436]
Underfull \hbox (badness 2503) in paragraph at lines 5726--5730
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447]
[1448] [1449]
Underfull \hbox (badness 7081) in paragraph at lines 6520--6523
[]\T1/ptm/m/n/10 Objects of class \T1/zi4/m/n/10 "hclust" \T1/ptm/m/n/10 can be
 con-verted to class \T1/zi4/m/n/10 "dendrogram" \T1/ptm/m/n/10 us-ing method

Underfull \hbox (badness 10000) in paragraph at lines 6524--6526
[]\T1/zi4/m/n/10 rev.dendrogram \T1/ptm/m/n/10 sim-ply re-turns the den-dro-gra
m \T1/zi4/m/n/10 x \T1/ptm/m/n/10 with re-versed nodes, see also
[1450] [1451] [1452] [1453] [1454]
Underfull \vbox (badness 3803) has occurred while \output is active [1455]
[1456] [1457] [1458] [1459] [1460] [1461] [1462]
Underfull \hbox (badness 10000) in paragraph at lines 7369--7372
[]\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][]\T
1/zi4/m/n/10 dist[][][]()\T1/ptm/m/n/10 , the
[1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473]
[1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484]
Underfull \vbox (badness 10000) has occurred while \output is active [1485]
[1486] [1487] [1488] [1489]
Underfull \hbox (badness 2626) in paragraph at lines 9048--9051
[]\T1/ptm/m/n/10 Either \T1/zi4/m/n/10 "convolution" \T1/ptm/m/n/10 or \T1/zi4/
m/n/10 "recursive" \T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If
[1490] [1491]
Underfull \hbox (badness 2503) in paragraph at lines 9155--9159
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1492] [1493] [1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] [1502]
[1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511]
Underfull \hbox (badness 4518) in paragraph at lines 10469--10474
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1512] [1513] [1514] [1515] [1516]
Underfull \hbox (badness 2142) in paragraph at lines 10830--10833
[]\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p
tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1
0 dev \OMS/cmsy/m/n/10 ^^@

Underfull \hbox (badness 1253) in paragraph at lines 10849--10852
[]\T1/ptm/m/n/10 When \T1/zi4/m/n/10 trace \T1/ptm/m/n/10 is true, calls to [][
]\T1/zi4/m/n/10 cat[][][] \T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-
er-a-tion. Hence,
[1517]
Underfull \hbox (badness 1708) in paragraph at lines 10911--10915
[]\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter-
na-tives are:
[1518] [1519] [1520] [1521] [1522] [1523]
Underfull \hbox (badness 1694) in paragraph at lines 11307--11310
[]\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these 
de-fault to
[1524] [1525] [1526] [1527] [1528] [1529] [1530] [1531]pdfTeX warning (ext4): d
estination with the same identifier (name{Rfn.hat}) has been already used, dupl
icate ignored
<to be read again> 
                   \relax 
l.11791 \aliasA{hat}{influence.measures}{hat}
                                              [1532] [1533]
Underfull \hbox (badness 1484) in paragraph at lines 11926--11928
[]\T1/ptm/m/n/10 The func-tion \T1/zi4/m/n/10 hat() \T1/ptm/m/n/10 ex-ists main
ly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing
[1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543]
Underfull \hbox (badness 10000) in paragraph at lines 12519--12521
[]\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][]\T1/zi4/m/n/10 solve.defa
ult[][][] \T1/ptm/m/n/10 when \T1/zi4/m/n/10 SSinit =
[1544] [1545] [1546] [1547] [1548] [1549]
Underfull \hbox (badness 2894) in paragraph at lines 12855--12859
[]\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f
ault method
[1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] [1558] [1559] [1560]
[1561]
Underfull \hbox (badness 4518) in paragraph at lines 13605--13610
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1562] [1563] [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571]
Underfull \hbox (badness 4518) in paragraph at lines 14257--14262
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1572] [1573]
Underfull \hbox (badness 8151) in paragraph at lines 14395--14399
[]\T1/ptm/m/n/10 Only for the (de-fault) case \T1/zi4/m/n/10 (surface = "interp
olate",statistics =

Underfull \hbox (badness 1199) in paragraph at lines 14402--14404
[]\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on
ly if \T1/zi4/m/n/10 family \T1/ptm/m/n/10 is
[1574] [1575] [1576] [1577] [1578] [1579] [1580] [1581] [1582] [1583] [1584]
[1585] [1586] [1587] [1588] [1589] [1590] [1591]
Underfull \hbox (badness 2503) in paragraph at lines 15473--15477
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599]
Underfull \hbox (badness 4621) in paragraph at lines 15985--15991
[]\T1/zi4/m/n/10 model.offset \T1/ptm/m/n/10 and \T1/zi4/m/n/10 model.response 
\T1/ptm/m/n/10 are equiv-a-lent to \T1/zi4/m/n/10 model.extract(,"offset") \T1/
ptm/m/n/10 and
[1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610]
[1611] [1612] [1613] [1614] [1615] [1616] [1617] [1618] [1619] [1620] [1621]
[1622] [1623] [1624] [1625] [1626] [1627]
Underfull \vbox (badness 10000) has occurred while \output is active [1628]
Underfull \vbox (badness 10000) has occurred while \output is active [1629]
[1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640]
[1641]
Underfull \hbox (badness 1377) in paragraph at lines 18588--18593
[]\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz
a-tion is per-formed on

Underfull \hbox (badness 1735) in paragraph at lines 18593--18596
[]\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma
-tion to the gra-di-ent, on
[1642]
Underfull \hbox (badness 2343) in paragraph at lines 18606--18610
[]\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i
t is un-able to re-duce

Underfull \hbox (badness 3471) in paragraph at lines 18606--18610
\T1/ptm/m/n/10 the value by a fac-tor of \T1/zi4/m/n/10 reltol * (abs(val) + re
ltol) \T1/ptm/m/n/10 at a step. De-faults to

Underfull \hbox (badness 2662) in paragraph at lines 18614--18618
[]\T1/ptm/m/n/10 The fre-quency of re-ports for the \T1/zi4/m/n/10 "BFGS"\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 "L-BFGS-B" \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "SANN" \
T1/ptm/m/n/10 meth-ods if
[1643] [1644] [1645]
Overfull \hbox (15.73795pt too wide) in paragraph at lines 18839--18839
 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b
ut NM may be ok and "unavoidable",[] 

Overfull \hbox (3.75941pt too wide) in paragraph at lines 18842--18842
 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list(
warn.1d.NelderMead = FALSE)))[] 

Underfull \vbox (badness 10000) has occurred while \output is active [1646]
[1647] [1648] [1649] [1650] [1651] [1652]
Underfull \hbox (badness 1337) in paragraph at lines 19264--19267
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661]
Underfull \hbox (badness 3049) in paragraph at lines 19760--19764
[]\T1/ptm/m/n/10 In the Cook's dis-tance vs leverage/(1-leverage) plot, con-tou
rs of stan-dard-ized resid-u-als
[1662] [1663] [1664] [1665]
Underfull \hbox (badness 1194) in paragraph at lines 20018--20021
[]\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting
 of the con-fi-dence
[1666] [1667] [1668] [1669] [1670] [1671] [1672]
Underfull \hbox (badness 2503) in paragraph at lines 20397--20400
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3919) in paragraph at lines 20424--20426
[]\T1/ptm/m/n/10 the char-ac-ter string \T1/zi4/m/n/10 "Exact Poisson test" \T1
/ptm/m/n/10 or \T1/zi4/m/n/10 "Comparison of Poisson
[1673] [1674] [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683]
[1684] [1685] [1686] [1687] [1688] [1689] [1690]
Underfull \hbox (badness 10000) in paragraph at lines 21501--21507
[]\T1/ptm/m/n/10 For time-series pre-dic-tion, [][]\T1/zi4/m/n/10 predict.ar[][
][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 predict.Arima[][][]\T1/ptm/m/n/10 , [][]
\T1/zi4/m/n/10 predict.arima0[][][]\T1/ptm/m/n/10 ,
[1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701]
[1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712]
[1713]
Underfull \hbox (badness 1337) in paragraph at lines 22855--22861
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721]
Overfull \hbox (27.74408pt too wide) in paragraph at lines 23420--23420
 []  \T1/zi4/m/n/9 t(vapply(1:9, function(typ) quantile(x, prob=prob, type = ty
p, ...), quantile(x, prob, type=1)))[] 
[1722] [1723] [1724] [1725] [1726]
Underfull \hbox (badness 10000) in paragraph at lines 23671--23674
[]\T1/ptm/m/n/10 Optional vec-tor with clus-ter mem-ber-ships as re-turned by

Underfull \hbox (badness 4205) in paragraph at lines 23671--23674
\T1/zi4/m/n/10 cutree(hclust.obj,k = k)\T1/ptm/m/n/10 , can be spec-i-fied for 
ef-fi-ciency if al-ready
[1727] [1728] [1729] [1730] [1731] [1732] [1733] [1734] [1735]
Underfull \hbox (badness 1824) in paragraph at lines 24257--24263
[]\T1/ptm/m/n/10 Here, all the NAs in \T1/zi4/m/n/10 x \T1/ptm/m/n/10 are first
 re-placed by al-ter-

Underfull \hbox (badness 1033) in paragraph at lines 24257--24263
\T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 
where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/
m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where
[1736]
Underfull \hbox (badness 10000) in paragraph at lines 24278--24281
[]\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult \T1/zi4/m/n/10 y = run
med(x,k) \T1/ptm/m/n/10 sim-ply has \T1/zi4/m/n/10 y[j] =

Underfull \hbox (badness 3690) in paragraph at lines 24347--24351
[][][]\T1/zi4/m/n/10 smoothEnds[][][] \T1/ptm/m/n/10 which im-ple-ments Tukey's
 end point rule and is called by de-fault from
[1737]
Underfull \vbox (badness 3803) has occurred while \output is active [1738]
[1739] [1740] [1741] [1742] [1743] [1744] [1745]
Underfull \hbox (badness 2165) in paragraph at lines 24856--24861
[]\T1/ptm/m/n/10 Each of the fol-low-ing are \T1/zi4/m/n/10 "selfStart" \T1/ptm
/m/n/10 mod-els (with ex-am-ples) [][]\T1/zi4/m/n/10 SSasymp[][][]\T1/ptm/m/n/1
0 , [][]\T1/zi4/m/n/10 SSasympOff[][][]\T1/ptm/m/n/10 ,
[1746] [1747] [1748] [1749]
Underfull \hbox (badness 1867) in paragraph at lines 25061--25063
[]\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. 
Passed to

Underfull \hbox (badness 10000) in paragraph at lines 25074--25078
\T1/ptm/m/n/10 where \T1/zi4/m/n/10 NN <-[][]nobs[][][](object,use.fallback = u
se.fallback) \T1/ptm/m/n/10 and \T1/zi4/m/n/10 PP
[1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] [1760]
Underfull \vbox (badness 3803) has occurred while \output is active [1761]
[1762] [1763] [1764] [1765] [1766] [1767] [1768] [1769] [1770] [1771] [1772]
[1773]
Underfull \vbox (badness 10000) has occurred while \output is active [1774]
Underfull \hbox (badness 3514) in paragraph at lines 26634--26639
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1775] [1776] [1777] [1778]
Overfull \hbox (2.23795pt too wide) in paragraph at lines 26868--26868
 []       \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5]
 == frac(log(2), e^{phi[2]})}),[] 
[1779]
Underfull \hbox (badness 3514) in paragraph at lines 26904--26910
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1780] [1781] [1782] [1783]
Underfull \hbox (badness 3514) in paragraph at lines 27118--27123
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1784]
Underfull \hbox (badness 3514) in paragraph at lines 27205--27210
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1785]
Underfull \hbox (badness 3514) in paragraph at lines 27270--27275
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1786] [1787]
Underfull \hbox (badness 3514) in paragraph at lines 27364--27369
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1788] [1789]
Underfull \hbox (badness 6691) in paragraph at lines 27456--27461
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 x\T1/p
tm/m/n/10 . It is the value of the ex-pres-sion
[1790] [1791] [1792] [1793] [1794] [1795] [1796] [1797]
Underfull \hbox (badness 4024) in paragraph at lines 27984--27987
[]\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion
, which
[1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807]
Underfull \hbox (badness 5431) in paragraph at lines 28590--28592
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1808] [1809] [1810] [1811]
Underfull \hbox (badness 5431) in paragraph at lines 28800--28803
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1812] [1813] [1814] [1815] [1816]
Underfull \hbox (badness 1337) in paragraph at lines 29114--29118
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1817] [1818] [1819] [1820] [1821]
Underfull \hbox (badness 1616) in paragraph at lines 29416--29419
[]\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial
 resid-u-als, when
[1822] [1823] [1824] [1825] [1826] [1827] [1828] [1829] [1830] [1831] [1832]
[1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840]
Underfull \hbox (badness 3557) in paragraph at lines 30546--30550
[]\T1/ptm/m/n/10 Setting \T1/zi4/m/n/10 extendInt \T1/ptm/m/n/10 to a non-\T1/z
i4/m/n/10 "no" \T1/ptm/m/n/10 string, means search-ing for the cor-rect \T1/zi4
/m/n/10 interval =
[1841] [1842] [1843]
Underfull \vbox (badness 10000) has occurred while \output is active [1844]
[1845] [1846]
Underfull \hbox (badness 1337) in paragraph at lines 30910--30914
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] [1855]
Underfull \hbox (badness 1337) in paragraph at lines 31437--31441
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1856] [1857] [1858] [1859] [1860] [1861] [1862] [1863] [1864] [1865])
(./stats4-pkg.tex [1866]
Chapter 11.
[1867] [1868] [1869] [1870] [1871] [1872]pdfTeX warning (ext4): destination wit
h the same identifier (name{Rfn.show.Rdash.methods}) has been already used, dup
licate ignored
<to be read again> 
                   \relax 
l.407 ...Package \pkg{stats4}}{show.Rdash.methods}
                                                   [1873] [1874] [1875])
(./tcltk-pkg.tex [1876]
Chapter 12.
[1877] [1878] [1879] [1880] [1881] [1882] [1883]
Underfull \vbox (badness 10000) has occurred while \output is active [1884]
Underfull \vbox (badness 10000) has occurred while \output is active [1885]
Underfull \hbox (badness 1546) in paragraph at lines 664--671
[]\T1/zi4/m/n/10 tcl \T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-ing
 any Tk or Tcl com-mand by sim-ply run-ning
[1886] [1887] [1888] [1889] [1890] [1891] [1892] [1893] [1894] [1895] [1896]
[1897]) (./tools-pkg.tex [1898]
Chapter 13.
[1899]

LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined
(Font)              using `T1/zi4/m/n' instead on input line 72.

[1900]
Underfull \hbox (badness 3039) in paragraph at lines 164--167
[]\T1/zi4/m/n/10 assertWarning() \T1/ptm/m/n/10 as-serts that a warn-ing will b
e sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas
[1901] [1902]
Underfull \hbox (badness 1308) in paragraph at lines 285--298
[]\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t
o ren-der each of the 12 types

Underfull \hbox (badness 4967) in paragraph at lines 285--298
\T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][]\T1/zi4/m/n/10 bibe
ntry[][][] \T1/ptm/m/n/10 as well as sev-eral other rou-tines de-

Underfull \hbox (badness 10000) in paragraph at lines 285--298
\T1/zi4/m/n/10 formatIncollection\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatInProcee
dings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatManual\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 formatMastersthesis\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 285--298
\T1/zi4/m/n/10 formatMisc\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatPhdthesis\T1/ptm
/m/n/10 , \T1/zi4/m/n/10 formatProceedings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 forma
tTechreport \T1/ptm/m/n/10 and
[1903] [1904]
Underfull \hbox (badness 3039) in paragraph at lines 389--391
[]\T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gine 
to use. Over-rides any
[1905] [1906] [1907] [1908] [1909] [1910] [1911] [1912] [1913] [1914] [1915]
[1916] [1917]
Underfull \hbox (badness 4441) in paragraph at lines 1139--1149
\T1/ptm/m/n/10 giv-ing the repos-i-to-ries to use for lo-cat-ing re-verse de-pe
n-den-cies (de-

Underfull \hbox (badness 1014) in paragraph at lines 1163--1165
[]\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v
erse de-pen-den-cies

Underfull \hbox (badness 7238) in paragraph at lines 1169--1171
[]\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a 
pre-vi-ous
[1918]
Underfull \hbox (badness 10000) in paragraph at lines 1206--1209
[]\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing


Overfull \hbox (15.52087pt too wide) in paragraph at lines 1206--1209
\T1/zi4/m/n/10 summarize_check_packages_in_dir_results \T1/ptm/m/n/10 and \T1/z
i4/m/n/10 summarize_check_packages_in_dir_timings\T1/ptm/m/n/10 ,
[1919] [1920] [1921] [1922] [1923]
Underfull \hbox (badness 2293) in paragraph at lines 1558--1560
[]\T1/zi4/m/n/10 CRAN_memtest_notes() \T1/ptm/m/n/10 is now dep-re-cated, with 
its func-tion-al-ity in-te-grated into that of
[1924] [1925] [1926]
Underfull \hbox (badness 7981) in paragraph at lines 1696--1701
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
 sub-set of

Underfull \hbox (badness 1082) in paragraph at lines 1703--1705
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br
ary trees, or \T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 for all known trees (see
[1927] [1928] [1929]pdfTeX warning (ext4): destination with the same identifier
 (name{Rfn.R.Rul.GSCMD}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.1900 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD}
                                                   [1930] [1931] [1932]
[1933] [1934] [1935]
Overfull \hbox (17.27782pt too wide) in paragraph at lines 2202--2202
 []\T1/zi4/m/n/9 writeLines(paste0("\\newcommand{\\logo}{\\if{html}{\\figure{Rl
ogo.svg}{options: width=100}",[] 
[1936] [1937] [1938]
Underfull \hbox (badness 7981) in paragraph at lines 2371--2377
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
 sub-set of
[1939] [1940] [1941] [1942] [1943] [1944] [1945]

LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 2846.


LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 2847.


LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 2847.

[1946] [1947] [1948] [1949] [1950]
Underfull \hbox (badness 1424) in paragraph at lines 3128--3130
[]\T1/zi4/m/it/10 NULL \T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec-t
or of links, as re-turned by
[1951] [1952] [1953] [1954] [1955] [1956] [1957] [1958] [1959] [1960] [1961]
Underfull \hbox (badness 10000) in paragraph at lines 3832--3834
[]\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run
,
[1962] [1963]
Underfull \hbox (badness 10000) in paragraph at lines 3971--3974
[]\T1/ptm/m/n/10 Where sup-ported (\T1/zi4/m/it/10 texi2dvi \T1/ptm/m/n/10 5.0 
and later; \T1/zi4/m/it/10 texify.exe \T1/ptm/m/n/10 from MiK-TeX), op-tion
[1964] [1965]
Underfull \hbox (badness 1137) in paragraph at lines 4073--4075
[]\T1/ptm/m/n/10 a ma-trix spec-i-fy-ing all pack-ages in-stalled on the lo-cal
 sys-tem, as from
[1966] [1967] [1968] [1969] [1970]
Underfull \hbox (badness 1796) in paragraph at lines 4381--4386
[]\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over \T
1/zi4/m/it/10 write_PACKAGES \T1/ptm/m/n/10 in the \T1/zi4/m/it/10 type ==
[1971]
Underfull \hbox (badness 1838) in paragraph at lines 4455--4461
[]\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p
o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists.
 The

Underfull \hbox (badness 10000) in paragraph at lines 4455--4461
\T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in 
the pack-age are ex-am-ined to cre-ate a file
[1972] [1973] [1974]
Underfull \hbox (badness 2197) in paragraph at lines 4671--4681
[]\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][]\T1/zi4
/m/it/10 available.packages[][][]\T1/ptm/m/n/10 :
[1975]
Underfull \hbox (badness 1571) in paragraph at lines 4734--4738
[]\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down-
load speed and time spent by
[1976] [1977] [1978]) (./utils-pkg.tex
Chapter 14.
[1979]
Underfull \hbox (badness 2556) in paragraph at lines 47--52
[]\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `\T
1/zi4/m/it/10 insertions\T1/ptm/m/n/10 ',
[1980] [1981] [1982] [1983] [1984]
Underfull \hbox (badness 10000) in paragraph at lines 376--381
\T1/zi4/m/it/10 c("vertical","horizontal","cascade","minimize","restore") \T1/p
tm/m/n/10 with
[1985] [1986] [1987] [1988] [1989]
Underfull \hbox (badness 10000) in paragraph at lines 717--723
[]\T1/ptm/m/n/10 Functions \T1/zi4/m/it/10 aspell_package_Rd_files\T1/ptm/m/n/1
0 , \T1/zi4/m/it/10 aspell_package_vignettes\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3343) in paragraph at lines 717--723
\T1/zi4/m/it/10 aspell_package_R_files \T1/ptm/m/n/10 and \T1/zi4/m/it/10 aspel
l_package_C_files \T1/ptm/m/n/10 per-form spell check-ing on the
[1990] [1991]
Underfull \hbox (badness 5847) in paragraph at lines 850--856
[]\T1/ptm/m/n/10 Argument \T1/zi4/m/it/10 filters \T1/ptm/m/n/10 can be used to
 se-lect which of the pack-ages on the repos-i-to-

Underfull \hbox (badness 4229) in paragraph at lines 850--856
\T1/ptm/m/n/10 ries are re-ported. It is called with its de-fault value (\T1/zi
4/m/it/10 NULL\T1/ptm/m/n/10 ) by func-tions such as
[1992]
Underfull \hbox (badness 3861) in paragraph at lines 918--923
[]\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields \T1/zi4/m/it/10 "O
S_type"\T1/ptm/m/n/10 , \T1/zi4/m/it/10 "License"\T1/ptm/m/n/10 , \T1/zi4/m/it/
10 "License_is_FOSS"\T1/ptm/m/n/10 ,
[1993] [1994]
Underfull \hbox (badness 3323) in paragraph at lines 1089--1097
[]\T1/ptm/m/n/10 (\T1/ptm/m/it/10 deprecated\T1/ptm/m/n/10 , use \T1/zi4/m/it/1
0 bibtex = T|F \T1/ptm/m/n/10 in-stead!) a num-ber, say $\OML/cmm/m/it/10 m$\T1
/ptm/m/n/10 , in-di-cat-

Underfull \hbox (badness 2961) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 ing that the bib-tex code should be given in ad-di-tion to the f
or-mat-

Underfull \hbox (badness 3919) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 ted tex \T1/ptm/m/it/10 when \T1/ptm/m/n/10 there are not more t
han $\OML/cmm/m/it/10 m$ \T1/ptm/m/n/10 en-tries. The de-fault is

Underfull \hbox (badness 3735) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 taken as [][]\T1/zi4/m/it/10 getOption[][][]("citation.bibtex.ma
x",1) \T1/ptm/m/n/10 which is \T1/zi4/m/it/10 1 \T1/ptm/m/n/10 typ-i-cally.

Underfull \hbox (badness 1817) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 For ex-am-ple, to see no bib-tex at all, you can change the de-f
ault by
[1995]
Underfull \hbox (badness 10000) in paragraph at lines 1101--1103
[]\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing
[1996] [1997]
Underfull \vbox (badness 3803) has occurred while \output is active [1998]
[1999] [2000] [2001] [2002]
Underfull \hbox (badness 1371) in paragraph at lines 1606--1608
[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/it/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/it/10 ccaddress \T1/ptm/m/n/10 to pass to
[2003]

LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 1676.

[2004] [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012]
Underfull \hbox (badness 2057) in paragraph at lines 2215--2217
[]\T1/ptm/m/n/10 None for \T1/zi4/m/it/10 chooseCRANmirror()\T1/ptm/m/n/10 , th
is func-tion is in-voked for its side ef-fect of up-dat-ing
[2013] [2014] [2015] [2016] [2017] [2018]pdfTeX warning (ext4): destination wit
h the same identifier (name{Rfn.clipboard}) has been already used, duplicate ig
nored
<to be read again> 
                   \relax 
l.2566 ... the Clipboard in MS Windows}{clipboard}
                                                   [2019] [2020]
Underfull \hbox (badness 1748) in paragraph at lines 2733--2736
[]\T1/ptm/m/n/10 A [][]\T1/zi4/m/it/10 list[][][] \T1/ptm/m/n/10 or [][]\T1/zi4
/m/it/10 array[][][]\T1/ptm/m/n/10 , see the \T1/zi4/m/it/10 simplify \T1/ptm/m
/n/10 ar-gu-ment above. In the lat-ter case, the iden-tity
[2021] [2022] [2023] [2024] [2025] [2026] [2027]
Underfull \hbox (badness 5388) in paragraph at lines 3142--3146
[]\T1/ptm/m/n/10 files end-ing `\T1/zi4/m/it/10 .tab\T1/ptm/m/n/10 ', `\T1/zi4/
m/it/10 .txt\T1/ptm/m/n/10 ' or `\T1/zi4/m/it/10 .TXT\T1/ptm/m/n/10 ' are read 
us-ing [][]\T1/zi4/m/it/10 read.table[][][](...,header =

Underfull \hbox (badness 2285) in paragraph at lines 3147--3150
[]\T1/ptm/m/n/10 files end-ing `\T1/zi4/m/it/10 .csv\T1/ptm/m/n/10 ' or `\T1/zi
4/m/it/10 .CSV\T1/ptm/m/n/10 ' are read us-ing [][]\T1/zi4/m/it/10 read.table[]
[][](...,header = TRUE,sep =
[2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] [2036] [2037] [2038]
Underfull \hbox (badness 1430) in paragraph at lines 3906--3914
[]\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by
 the \T1/zi4/m/it/10 quiet \T1/ptm/m/n/10 ar-gu-ment and the
[2039]
Underfull \hbox (badness 1231) in paragraph at lines 3983--3995
[]\T1/ptm/m/n/10 Usernames and pass-words can be set for HTTP proxy trans-fers 
via en-vi-ron-ment vari-able
[2040] [2041]
Underfull \hbox (badness 10000) in paragraph at lines 4141--4143
[]\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][]\T1/zi4/m/it/10 dow
nload.file[][][] \T1/ptm/m/n/10 and
[2042] [2043] [2044] [2045] [2046] [2047] [2048] [2049] [2050] [2051] [2052]
[2053]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.for
mat}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.4839 ...mat Unordered and Ordered Lists}{format}
                                                  pdfTeX warning (ext4): destin
ation with the same identifier (name{Rfn.format.1}) has been already used, dupl
icate ignored
<to be read again> 
                   \relax 
l.4839 ...mat Unordered and Ordered Lists}{format}
                                                   [2054] [2055] [2056]
[2057] [2058] [2059] [2060] [2061]
Underfull \hbox (badness 1622) in paragraph at lines 5358--5362
[]\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing
 to ex-ter-nal GUIs or to the
[2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071]

LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 5990.


Underfull \hbox (badness 1371) in paragraph at lines 5994--5996
[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/it/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/it/10 ccaddress \T1/ptm/m/n/10 to pass to
[2072]
Underfull \hbox (badness 1502) in paragraph at lines 6083--6088
[]\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words
'. `Key-

Underfull \hbox (badness 2103) in paragraph at lines 6083--6088
\T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are 
listed in file
[2073] [2074] [2075]
Underfull \hbox (badness 10000) in paragraph at lines 6256--6265
[]\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de
x,
[2076]
Underfull \hbox (badness 2150) in paragraph at lines 6320--6323
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion 
to search. See
[2077] [2078]
Underfull \hbox (badness 3118) in paragraph at lines 6458--6460
[]\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion `
Lock-ing' in the help for
[2079] [2080] [2081]
Underfull \hbox (badness 1325) in paragraph at lines 6630--6634
[]\T1/ptm/m/n/10 a ma-trix as re-turned by [][]\T1/zi4/m/it/10 available.packag
es[][][] \T1/ptm/m/n/10 list-ing pack-ages avail-able

Underfull \hbox (badness 4726) in paragraph at lines 6642--6648
\T1/ptm/m/n/10 used if \T1/zi4/m/it/10 repos = NULL\T1/ptm/m/n/10 . Can also be
 a char-ac-ter vec-tor, a sub-set of
[2082]
Underfull \hbox (badness 10000) in paragraph at lines 6714--6717
[]\T1/ptm/m/n/10 an op-tional char-ac-ter vec-tor of ad-di-tional op-tion(s) to
 be

Underfull \hbox (badness 10000) in paragraph at lines 6714--6717
\T1/ptm/m/n/10 passed to \T1/zi4/m/it/10 R CMD INSTALL \T1/ptm/m/n/10 for a sou
rce pack-age in-stall. E.g.,
[2083]
Underfull \hbox (badness 3219) in paragraph at lines 6790--6797
[]\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is \T1/zi4/m/it/
10 "both" \T1/ptm/m/n/10 which means `use bi-nary if avail-

Underfull \hbox (badness 5175) in paragraph at lines 6790--6797
\T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there
 are source pack-ages

Underfull \hbox (badness 1342) in paragraph at lines 6790--6797
\T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com
-piled is con-trolled by

Underfull \hbox (badness 1596) in paragraph at lines 6790--6797
[][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")\T1/
ptm/m/n/10 . \T1/zi4/m/it/10 type = "both" \T1/ptm/m/n/10 will be silently

Underfull \hbox (badness 2932) in paragraph at lines 6798--6801
[]\T1/ptm/m/n/10 Using pack-ages with \T1/zi4/m/it/10 type = "source" \T1/ptm/m
/n/10 al-ways works pro-vided the pack-age con-tains no
[2084]
Underfull \hbox (badness 10000) in paragraph at lines 6934--6939
[][][]\T1/zi4/m/it/10 update.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10
 available.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 download.packages
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 installed.packages[][][]\T1/ptm/m/n/
10 ,
[2085] [2086] [2087] [2088] [2089] [2090] [2091] [2092] [2093] [2094] [2095]
[2096] [2097] [2098] [2099] [2100] [2101] [2102] [2103] [2104] [2105] [2106]
[2107] [2108] [2109]
Underfull \hbox (badness 10000) in paragraph at lines 8434--8436
[]\T1/ptm/m/n/10 for \T1/zi4/m/it/10 asDateBuilt()\T1/ptm/m/n/10 , a [][]\T1/zi
4/m/it/10 character[][][] \T1/ptm/m/n/10 string as from

Underfull \hbox (badness 2310) in paragraph at lines 8456--8461
[]\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the
 given pack-age is found and can suc-cess-fully be read,
[2110] [2111] [2112] [2113] [2114] [2115] [2116] [2117]
Underfull \hbox (badness 1248) in paragraph at lines 8980--8984
[]\T1/zi4/m/it/10 R CMD build \T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/m/
n/10 source tar-balls. The name(s) of the pack-ages are taken from the
[2118]
Underfull \hbox (badness 1789) in paragraph at lines 9058--9060
[]\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for
 more dis-cus-sion of the
[2119] [2120] [2121] [2122] [2123] [2124] [2125] [2126] [2127] [2128] [2129]
[2130] [2131]
Underfull \hbox (badness 1097) in paragraph at lines 9895--9898
[]\T1/ptm/m/n/10 The name \T1/zi4/m/it/10 "clipboard" \T1/ptm/m/n/10 may also b
e used on Win-dows, in which case
[2132] [2133]
Underfull \hbox (badness 3000) in paragraph at lines 10031--10036
[][][]\T1/zi4/m/it/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/it/10 read.t
able[][][]\T1/ptm/m/n/10 ;
[2134] [2135] [2136] [2137] [2138] [2139] [2140] [2141] [2142]
Underfull \hbox (badness 2134) in paragraph at lines 10614--10619
[][][]\T1/zi4/m/it/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/it/10 write.
table[][][]\T1/ptm/m/n/10 ;

Underfull \hbox (badness 10000) in paragraph at lines 10670--10675
[]\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for


Underfull \hbox (badness 10000) in paragraph at lines 10670--10675
\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE\T1/ptm/m/n/10 , \T1/zi4/m/it/10 HKEY_CLASSES
_ROOT\T1/ptm/m/n/10 . \T1/zi4/m/it/10 HKEY_CURRENT_USER\T1/ptm/m/n/10 ,
[2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151]
Underfull \hbox (badness 2469) in paragraph at lines 11163--11167
[]\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia
, The Free En-cy-clo-pe-dia.

Underfull \hbox (badness 3428) in paragraph at lines 11163--11167
[][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title
 = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac-
[2152] [2153] [2154] [2155] [2156]
Underfull \hbox (badness 4060) in paragraph at lines 11494--11497
[]\T1/ptm/m/n/10 If `\T1/zi4/m/it/10 --default-packages\T1/ptm/m/n/10 ' is not 
used, then \T1/zi4/m/it/10 Rscript \T1/ptm/m/n/10 checks the en-vi-ron-ment var
i-able

Overfull \hbox (18.77168pt too wide) in paragraph at lines 11517--11517
 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr
aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] 
[2157] [2158] [2159] [2160]
Underfull \hbox (badness 2150) in paragraph at lines 11756--11758
[][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/
ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac
s / manual /
[2161] [2162] [2163] [2164]
Underfull \hbox (badness 10000) in paragraph at lines 11975--11979
[]\T1/ptm/m/n/10 The de-fault for \T1/zi4/m/it/10 stylepath \T1/ptm/m/n/10 is n
ow taken from the en-vi-ron-ment vari-able

Underfull \hbox (badness 10000) in paragraph at lines 12006--12012
[]\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y
ou can add a
[2165] [2166]
Underfull \hbox (badness 1009) in paragraph at lines 12200--12212
[]\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func-
tions can be ex-e-cuted. If
[2167]
Underfull \hbox (badness 4779) in paragraph at lines 12237--12239
[]\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure
s the R GUI (\T1/zi4/m/it/10 Rgui\T1/ptm/m/n/10 ) con-sole un-der MS Win-dows a
nd

Underfull \hbox (badness 1077) in paragraph at lines 12267--12274
\T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p
er-sonal' di-rec-tory, oth-er-wise to
[2168] [2169] [2170] [2171] [2172] [2173] [2174]
Underfull \hbox (badness 3780) in paragraph at lines 12668--12672
[]\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][]\T1
/zi4/m/it/10 options[][][]("BioC_mirror")\T1/ptm/m/n/10 , e.g. via

Underfull \hbox (badness 2635) in paragraph at lines 12684--12687
[]\T1/ptm/m/n/10 Repository `\T1/zi4/m/it/10 CRAN\T1/ptm/m/n/10 ' is treated sp
e-cially: the value is taken from the cur-rent set-ting of
[2175] [2176] [2177] [2178]
Underfull \hbox (badness 2302) in paragraph at lines 12889--12891
[]\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t
o the Win-dows API call
[2179] [2180] [2181] [2182]
Underfull \hbox (badness 10000) in paragraph at lines 13185--13190
[]\T1/ptm/m/n/10 logical; if \T1/zi4/m/it/10 TRUE \T1/ptm/m/n/10 (de-fault), []
[]\T1/zi4/m/it/10 deparse[][][](control = <S>) \T1/ptm/m/n/10 will not have

Underfull \hbox (badness 5970) in paragraph at lines 13194--13197
[]\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t
ive
[2183] [2184]
Underfull \vbox (badness 10000) has occurred while \output is active [2185]
[2186] [2187] [2188] [2189]
Underfull \hbox (badness 2932) in paragraph at lines 13614--13621
[]\T1/ptm/m/n/10 If \T1/zi4/m/it/10 syntax = NULL \T1/ptm/m/n/10 (the de-fault)
 then the avail-able syn-tax ob-jects are con-sulted in turn,

Underfull \hbox (badness 1688) in paragraph at lines 13614--13621
\T1/ptm/m/n/10 and se-lected if their \T1/zi4/m/it/10 extension \T1/ptm/m/n/10 
com-po-nent matches (as a reg-exp) the file name. Ob-
[2190] [2191] [2192] [2193] [2194]
Underfull \hbox (badness 6510) in paragraph at lines 13923--13927
[]\T1/ptm/m/n/10 When ar-gu-ment \T1/zi4/m/it/10 tar \T1/ptm/m/n/10 is set to t
he com-mand \T1/zi4/m/it/10 tar \T1/ptm/m/n/10 on ma-cOS, en-vi-ron-ment vari-a
ble

Underfull \hbox (badness 10000) in paragraph at lines 13930--13933
[][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ 
format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 http : / / pubs . opengroup .
 org /

Underfull \hbox (badness 2245) in paragraph at lines 13930--13933
\T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9
2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX
[2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204]
Underfull \hbox (badness 10000) in paragraph at lines 14594--14599
[]\T1/ptm/m/n/10 Arguments such as \T1/zi4/m/it/10 destdir \T1/ptm/m/n/10 and \
T1/zi4/m/it/10 dependencies \T1/ptm/m/n/10 to be passed to

Underfull \hbox (badness 3861) in paragraph at lines 14594--14599
[][]\T1/zi4/m/it/10 install.packages[][][] \T1/ptm/m/n/10 and \T1/zi4/m/it/10 i
gnore_repo_cache\T1/ptm/m/n/10 , \T1/zi4/m/it/10 max_repo_cache_age \T1/ptm/m/n
/10 and

Underfull \hbox (badness 1052) in paragraph at lines 14600--14602
[]\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and
 in-stall. See
[2205]
Underfull \hbox (badness 10000) in paragraph at lines 14659--14662
[][][]\T1/zi4/m/it/10 install.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/1
0 available.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 download.package
s[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 installed.packages[][][]\T1/ptm/m/n
/10 ,
[2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] [2214] [2215] [2216]
[2217]
Underfull \hbox (badness 10000) in paragraph at lines 15432--15434
[]\T1/ptm/m/n/10 To write a Unix-style file on Win-dows, use a bi-nary con-nec-
tion e.g. \T1/zi4/m/it/10 file =
[2218] [2219] [2220] [2221]) [2222]
No file fullrefman.ind.
(./fullrefman.aux)

Package rerunfilecheck Warning: File `fullrefman.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Font Warning: Some font shapes were not available, defaults substituted.

 )
(see the transcript file for additional information)pdfTeX warning (dest): name
{Rfn.write.matrix} has been referenced but does not exist, replaced by a fixed 
one

pdfTeX warning (dest): name{Rfn.lmList} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dgTMatrix} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.glht} has been referenced but does not exist, r
eplaced by a fixed one

pdfTeX warning (dest): name{Rfn.survreg} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.coxph} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.stepAIC} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rinvGauss} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.gamma.shape} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.profile.glm} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cov.mcd} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cov.mve} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.Insurance} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.sparse.model.matrix} has been referenced but do
es not exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.lqs} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.logLik.lme} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.logLik.gls} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.lmrob} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rlm} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.wilcox.Rul.test} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.loglm} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.nlsList} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.daisy} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.spearman.test} has been referenced but does not
 exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.pSpearman} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.pKendall} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.Kendall} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cor.fk} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dMatrix} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dgCMatrix} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.confint.nls} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.confint.glm} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.sammon} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.isoMDS} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.width.SJ} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.bcv} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.ucv} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.bandwidth.nrd} has been referenced but does not
 exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.agnes} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.diana} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.lme} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.ansari.Rul.test} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rpart} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.sparseMatrix} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.showDefault} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getGroupMembers} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.resetGeneric} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.linearizeMlist} has been referenced but does no
t exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getGeneric} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getMethodsForDispatch} has been referenced but 
does not exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.setDataPart} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getDataPart} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rBind} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cBind} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.possibleExtends} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.panel.identify} has been referenced but does no
t exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.trellis.focus} has been referenced but does not
 exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.mosaic} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.levelplot} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.contourplot} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.assoc} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dpih} has been referenced but does not exist, r
eplaced by a fixed one

pdfTeX warning (dest): name{Rfn.truehist} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.bkde2D} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.which.is.max} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getNamespace} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.asNamespace} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.formalArgs} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.isRematched} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.chron} has been referenced but does not exist, 
replaced by a fixed one

{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc} </tmp/texfonts/pk/l
jfour/jknappen/ec/tctt1000.600pk>
kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tctt0900
mkdir: cannot create directory '././sbuild-nonexistent': Permission denied
mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tctt0900
This is METAFONT, Version 2.7182818 (TeX Live 2019/Debian) (preloaded base=mf)

(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt0900.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf)
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf
 Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf
 Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf
 Ok [100] [109] [98] [99] [108])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf
 Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44]
[45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95]
[96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137]
[138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149]
[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161]
[162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174]
[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf
 Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf
 Ok [185] [178] [179] [170] [186])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf
 Ok [188] [189] [190]) ) ) )
Font metrics written on tctt0900.tfm.
Output written on tctt0900.600gf (128 characters, 17564 bytes).
Transcript written on tctt0900.log.
mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900.600pk: successfully generated.
 </tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900
.600pk>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}{/
usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-t1-0.enc}</usr/shar
e/texlive/texmf-dist/fonts/type1/public/inconsolata/Inconsolata-zi4b.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/inconsolata/Inconsolata-zi4r.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cmextra/cmbsy7.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmbx10.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb></usr/share/tex
live/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/t
exmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/font
s/type1/public/amsfonts/cm/cmmib10.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmr5.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfo
nts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/c
msy10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy5.p
fb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy7.pfb></us
r/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/
fonts/type1/urw/times/utmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/ur
w/times/utmr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.
pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on fullrefman.pdf (2225 pages, 5571285 bytes).
Transcript written on fullrefman.log.
This is makeindex, version 2.15 [TeX Live 2019] (kpathsea + Thai support).
Scanning input file fullrefman.idx.................done (13939 entries accepted, 34 rejected).
Sorting entries................................................................................................................................................done (210880 comparisons).
Generating output file fullrefman.ind................done (13726 lines written, 55 warnings).
Output written in fullrefman.ind.
Transcript written in fullrefman.ilg.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./fullrefman.tex
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
(../../share/texmf/tex/latex/Rd.sty
(/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/bm.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/inconsolata/zi4.sty
`inconsolata-zi4' v1.12, 2019/05/17 Text macros for Inconsolata (msharpe)
(/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty
(/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex
(/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex
(/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex)))))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))

Package hyperref Warning: Option `hyperindex' has already been used,
(hyperref)                setting the option has no effect on input line 377.


Package hyperref Warning: Option `pagebackref' has already been used,
(hyperref)                setting the option has no effect on input line 377.

) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)))
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
Writing index file fullrefman.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
(./fullrefman.aux) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd)
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(./fullrefman.out) (./fullrefman.out)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (./version.tex)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}] (./fullrefman.toc
(/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd) [1] [2] [3]
[4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19]
[20] [21] [22] [23] [24] [25] [26] [27] [28] [29]) [30] (./base-pkg.tex
Chapter 1.
[1] [2]
Underfull \hbox (badness 6995) in paragraph at lines 141--149
[]\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber \T1/zi4/m/n/10 x \T1
/ptm/m/n/10 such that \T1/zi4/m/n/10 1 -x != 1\T1/ptm/m/n/10 . It

Underfull \hbox (badness 10000) in paragraph at lines 141--149
\T1/ptm/m/n/10 equals \T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits \T1/pt
m/m/n/10 if \T1/zi4/m/n/10 double.base

Underfull \hbox (badness 10000) in paragraph at lines 141--149
\T1/ptm/m/n/10 is 2 or \T1/zi4/m/n/10 double.rounding \T1/ptm/m/n/10 is 0; oth-
er-wise, it is \T1/zi4/m/n/10 (double.base

Underfull \hbox (badness 10000) in paragraph at lines 141--149
\T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2\T1/ptm/m/n/10 . Nor-mally \T1/zi4/m
/n/10 1.110223e-16\T1/ptm/m/n/10 . As

Underfull \hbox (badness 4995) in paragraph at lines 141--149
\T1/zi4/m/n/10 double.neg.ulp.digits \T1/ptm/m/n/10 is bounded be-low by \T1/zi
4/m/n/10 -(double.digits + 3)\T1/ptm/m/n/10 ,
[3] [4] [5]
Underfull \hbox (badness 1178) in paragraph at lines 297--301
[]\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][]\T1/zi4/m/n/
10 options[][][]("pkgType")\T1/ptm/m/n/10 . Val-ues
[6] [7] [8]
Underfull \hbox (badness 2556) in paragraph at lines 534--540
[]\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `\T
1/zi4/m/n/10 insertions\T1/ptm/m/n/10 ',
[9] [10] [11] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd)
[12] [13] [14] [15] [16] [17] [18]
Underfull \hbox (badness 2671) in paragraph at lines 1178--1181
[]\T1/ptm/m/n/10 If the calls to \T1/zi4/m/n/10 FUN \T1/ptm/m/n/10 re-turn vec-
tors of dif-fer-ent lengths, \T1/zi4/m/n/10 apply \T1/ptm/m/n/10 re-turns a lis
t of length
[19] [20] [21] (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd)
(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [22] [23] [24]
[25] [26] [27] [28] [29] [30]
Overfull \hbox (26.27782pt too wide) in paragraph at lines 1966--1966
 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen
t-date-and-times-in-MATLAB.html)[] 
[31] [32] [33] [34] [35] [36] [37]
Underfull \hbox (badness 10000) in paragraph at lines 2402--2404
[]\T1/ptm/m/n/10 The val-ues of the splits can also be ob-tained (less ef-fi-ci
ently) by

Underfull \hbox (badness 10000) in paragraph at lines 2405--2410
[][][]\T1/zi4/m/n/10 apply[][][] \T1/ptm/m/n/10 al-ways sim-pli-fies com-mon le
ngth re-sults, so at-tempt-ing to split via

Underfull \hbox (badness 1102) in paragraph at lines 2405--2410
\T1/zi4/m/n/10 apply(x,MARGIN,identity) \T1/ptm/m/n/10 does not work (as it sim
-ply gives \T1/zi4/m/n/10 x\T1/ptm/m/n/10 ). By chain-ing \T1/zi4/m/n/10 asplit

[38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52]
[53] [54] [55] [56] [57] [58] [59]
Underfull \hbox (badness 10000) in paragraph at lines 3784--3786
[]\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim
-ited by set-ting
[60] [61] [62]
Overfull \hbox (6.42029pt too wide) in paragraph at lines 4025--4025
 []   \T1/zi4/m/n/10 c.factor <- function(..., recursive=TRUE) unlist(list(...)
, recursive=recursive) 
[63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77]
[78]
Underfull \hbox (badness 2521) in paragraph at lines 5046--5048
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c
har-ac-ter by
[79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93]
[94] [95] [96]
Overfull \hbox (5.27168pt too wide) in paragraph at lines 6202--6202
 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex
_)), is.na(Im(NA_complex_)))[] 
[97] [98] [99] [100] [101] [102]
Overfull \hbox (46.35893pt too wide) in paragraph at lines 6611--6613
[]\T1/ptm/m/n/10 character string, par-tially matched to \T1/zi4/m/n/10 c("defa
ult","internal","wininet","libcurl")\T1/ptm/m/n/10 : 
[103] [104]
Underfull \hbox (badness 10000) in paragraph at lines 6759--6762
[]\T1/ptm/m/n/10 A note on `\T1/zi4/m/n/10 file://\T1/ptm/m/n/10 ' URLs. The mo
st gen-eral form (from RFC1738) is
[105] [106]
Underfull \hbox (badness 6063) in paragraph at lines 6941--6947
[]\T1/ptm/m/n/10 As from \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.0.0 the en-cod-ing \
T1/zi4/m/n/10 "UTF-8-BOM" \T1/ptm/m/n/10 is ac-cepted for read-ing and will re-


Underfull \hbox (badness 2343) in paragraph at lines 6941--6947
\T1/ptm/m/n/10 move a Byte Or-der Mark if present (which it of-ten is for files
 and web-pages gen-er-

Underfull \hbox (badness 1708) in paragraph at lines 6941--6947
\T1/ptm/m/n/10 ated by Mi-crosoft ap-pli-ca-tions). If a BOM is re-quired (it i
s not rec-om-mended) when

Underfull \hbox (badness 1831) in paragraph at lines 6941--6947
\T1/ptm/m/n/10 writ-ing it should be writ-ten ex-plic-itly, e.g. by \T1/zi4/m/n
/10 writeChar("\ufeff",con,eos = NULL) \T1/ptm/m/n/10 or
[107]
Underfull \hbox (badness 3568) in paragraph at lines 7003--7010
\T1/zi4/m/n/10 txt$[][]\T1/ptm/m/n/10 ), which can also be spec-i-fied as \T1/z
i4/m/n/10 "X11_primary" \T1/ptm/m/n/10 and the sec-ondary se-lec-tion as
[108] [109]
Underfull \vbox (badness 3803) has occurred while \output is active [110]
Underfull \vbox (badness 10000) has occurred while \output is active [111]
[112]
Underfull \hbox (badness 1077) in paragraph at lines 7330--7336
[]\T1/ptm/m/n/10 A length-one log-i-cal vec-tor that is not \T1/zi4/m/n/10 NA\T
1/ptm/m/n/10 . Con-di-tions of length greater

Underfull \hbox (badness 1231) in paragraph at lines 7330--7336
\T1/ptm/m/n/10 than one are cur-rently ac-cepted with a warn-ing, but only the 
first el-e-
[113] [114] [115] [116] [117] [118]
Underfull \hbox (badness 2096) in paragraph at lines 7671--7675
\T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https
 : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$
[][]\T1/ptm/m/n/10 .
[119] [120]
Underfull \hbox (badness 2351) in paragraph at lines 7789--7792
[][][]\T1/zi4/m/n/10 split[][][] \T1/ptm/m/n/10 for split-ting a vari-able ac-c
ord-ing to a group fac-tor; [][]\T1/zi4/m/n/10 factor[][][]\T1/ptm/m/n/10 , [][
]\T1/zi4/m/n/10 tabulate[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 table[][][]\T
1/ptm/m/n/10 ,
[121] [122] [123] [124] [125]
Underfull \hbox (badness 4479) in paragraph at lines 8115--8125
[][][]\T1/zi4/m/n/10 I[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 plot.data.frame
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 print.data.frame[][][]\T1/ptm/m/n/10 
, [][]\T1/zi4/m/n/10 row.names[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 names[]
[][] \T1/ptm/m/n/10 (for the col-umn names),
[126] [127] [128] [129] [130] [131]
Underfull \hbox (badness 1629) in paragraph at lines 8562--8574
[]\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a
re ig-nored, and real times

Underfull \hbox (badness 1609) in paragraph at lines 8562--8574
\T1/ptm/m/n/10 there is a prob-lem in the POSIX/C99 stan-dard with \T1/zi4/m/n/
10 "1969-12-31 23:59:59 UTC"\T1/ptm/m/n/10 , which

Underfull \hbox (badness 2426) in paragraph at lines 8562--8574
\T1/ptm/m/n/10 is \T1/zi4/m/n/10 -1 \T1/ptm/m/n/10 in cal-en-dar time and that 
value is on those OSes also used as an er-ror code.
[132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142]
Underfull \hbox (badness 1178) in paragraph at lines 9298--9302
[]\T1/ptm/m/n/10 If true, [][]\T1/zi4/m/n/10 list[][][]\T1/ptm/m/n/10 s and ato
mic vec-tors with non-[][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 names (see [][
]\T1/zi4/m/n/10 names[][][]\T1/ptm/m/n/10 ) are de-
[143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154]
[155] [156] [157] [158] [159] [160]
Underfull \hbox (badness 1735) in paragraph at lines 10446--10450
\T1/zi4/m/n/10 754-[]2008$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/n/10 https : / / 
en . wikipedia . org / wiki / Double _ precision$[][]\T1/ptm/m/n/10 , [][]$\T1/
zi4/m/n/10 https : / / en . wikipedia .
[161] [162] [163] [164] [165] [166] [167]
Underfull \hbox (badness 6396) in paragraph at lines 10885--10893
[]\T1/ptm/m/n/10 For the de-fault meth-ods, and when-ever there are equiv-a-len
t method def-i-ni-tions for

Underfull \hbox (badness 1946) in paragraph at lines 10885--10893
\T1/zi4/m/n/10 duplicated \T1/ptm/m/n/10 and \T1/zi4/m/n/10 anyDuplicated\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 anyDuplicated(x,...) \T1/ptm/m/n/10 is a ``gen-er-al-
ized'' short-cut for
[168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179]
[180] [181] [182] [183]
Underfull \hbox (badness 4569) in paragraph at lines 12002--12006
[]\T1/ptm/m/n/10 When eval-u-at-ing ex-pres-sions in a data frame that has been
 passed as an ar-gu-ment

Underfull \hbox (badness 2401) in paragraph at lines 12002--12006
\T1/ptm/m/n/10 to a func-tion, the rel-e-vant en-clo-sure is of-ten the caller'
s en-vi-ron-ment, i.e., one needs
[184]
Underfull \vbox (badness 10000) has occurred while \output is active [185]
[186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197]
[198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208]
Underfull \hbox (badness 2253) in paragraph at lines 13665--13667
[]\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is
 done: see
[209] [210]
Underfull \hbox (badness 1565) in paragraph at lines 13738--13742
[][][]\T1/zi4/m/n/10 Sys.readlink[][][] \T1/ptm/m/n/10 to find out about sym-bo
lic links, [][]\T1/zi4/m/n/10 files[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 fi
le.access[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files[][][]\T1/ptm/m/n/
10 , and

Underfull \hbox (badness 4927) in paragraph at lines 13782--13784
[]\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as \T1/zi4/m
/n/10 PATH \T1/ptm/m/n/10 and \T1/zi4/m/n/10 R_LIBS \T1/ptm/m/n/10 with \T1/zi4
/m/n/10 fsep =
[211] [212]
Underfull \hbox (badness 3148) in paragraph at lines 13875--13880
[][][]\T1/zi4/m/n/10 files[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files[
][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 help[][][]\T1/ptm/m/n/10 ; [][]\T1/zi4
/m/n/10 RShowDoc[][][] \T1/ptm/m/n/10 call \T1/zi4/m/n/10 file.show() \T1/ptm/m
/n/10 for \T1/zi4/m/n/10 type = "text"\T1/ptm/m/n/10 . Con-sider
[213]
Underfull \hbox (badness 1466) in paragraph at lines 13922--13925
[]\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For \T1/
zi4/m/n/10 file.copy \T1/ptm/m/n/10 and
[214]
Underfull \hbox (badness 10000) in paragraph at lines 14049--14053
[][][]\T1/zi4/m/n/10 file.info[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.ac
cess[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.path[][][]\T1/ptm/m/n/10 , [
][]\T1/zi4/m/n/10 file.show[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 unlink[][][]\T1/ptm/m/n/10 , [][]\T1/
zi4/m/n/10 basename[][][]\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 14060--14063
[][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][
] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik
i /
[215] [216] [217] [218] [219]
Underfull \hbox (badness 3965) in paragraph at lines 14352--14356
[]\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr
i-bu-tion func-tion, and in-deed,
[220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230] [231]
Underfull \hbox (badness 4429) in paragraph at lines 15128--15131
[]\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][]
\T1/zi4/m/n/10 complex[][][] \T1/ptm/m/n/10 only for
[232] [233]
Underfull \hbox (badness 10000) in paragraph at lines 15234--15236
[]\T1/ptm/m/n/10 This works via \T1/zi4/m/n/10 prettyNum()\T1/ptm/m/n/10 , whic
h calls

Underfull \hbox (badness 1215) in paragraph at lines 15234--15236
\T1/zi4/m/n/10 .format.zeros(*,replace=replace.zero) \T1/ptm/m/n/10 three times
 in this case, see

Underfull \hbox (badness 10000) in paragraph at lines 15256--15261
[]\T1/ptm/m/n/10 For num-bers, \T1/zi4/m/n/10 formatC() \T1/ptm/m/n/10 calls \T
1/zi4/m/n/10 prettyNum() \T1/ptm/m/n/10 when needed which it-self calls

Underfull \hbox (badness 1558) in paragraph at lines 15256--15261
\T1/zi4/m/n/10 .format.zeros(*,replace=replace.zero)\T1/ptm/m/n/10 . (\T1/ptm/m
/it/10 ``when needed''\T1/ptm/m/n/10 : when \T1/zi4/m/n/10 zero.print \T1/ptm/m
/n/10 is not

Underfull \hbox (badness 10000) in paragraph at lines 15268--15272
[]\T1/zi4/m/n/10 formatC \T1/ptm/m/n/10 does not nec-es-sar-ily align the num-b
ers on the dec-i-mal point, so

Underfull \hbox (badness 2426) in paragraph at lines 15268--15272
\T1/zi4/m/n/10 formatC(c(6.11,13.1),digits = 2,format = "fg") \T1/ptm/m/n/10 gi
ves \T1/zi4/m/n/10 c("6.1"," 13")\T1/ptm/m/n/10 . If you want
[234]
Underfull \hbox (badness 2035) in paragraph at lines 15307--15311
[]\T1/ptm/m/n/10 The de-fault for \T1/zi4/m/n/10 decimal.mark \T1/ptm/m/n/10 in
 \T1/zi4/m/n/10 formatC() \T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/pt
m/m/n/10 3.2.0: for use within
[235]
Underfull \vbox (badness 10000) has occurred while \output is active [236]
[237] [238] [239] [240] [241] [242] [243]
Underfull \hbox (badness 2452) in paragraph at lines 15906--15910
[]\T1/zi4/m/n/10 gctorture2 \T1/ptm/m/n/10 can also be in-voked via en-vi-ron-m
ent vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses-

Underfull \hbox (badness 1147) in paragraph at lines 15906--15910
\T1/ptm/m/n/10 sion. \T1/zi4/m/n/10 R_GCTORTURE \T1/ptm/m/n/10 cor-re-sponds to
 the \T1/zi4/m/n/10 step \T1/ptm/m/n/10 ar-gu-ment, \T1/zi4/m/n/10 R_GCTORTURE_
WAIT \T1/ptm/m/n/10 to \T1/zi4/m/n/10 wait\T1/ptm/m/n/10 , and
[244] [245] [246]
Underfull \hbox (badness 1092) in paragraph at lines 16079--16084
[][]\T1/zi4/m/n/10 library.dynam[][][]\T1/ptm/m/n/10 , or can be found af-ter t
he DLL has been loaded us-ing
[247] [248] [249]
Underfull \hbox (badness 6741) in paragraph at lines 16329--16333
\T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing \
T1/zi4/m/n/10 CRoutine\T1/ptm/m/n/10 , \T1/zi4/m/n/10 CallRoutine\T1/ptm/m/n/10
 ,
[250] [251] [252] [253] [254] [255] [256] [257] [258]
Underfull \vbox (badness 3803) has occurred while \output is active [259]
Underfull \vbox (badness 10000) has occurred while \output is active [260]
[261] [262] [263] [264] [265] [266] [267] [268] [269]
Underfull \hbox (badness 1478) in paragraph at lines 17622--17625
[]\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha
r-ac-ter vec-tor
[270] [271] [272] [273]
Underfull \hbox (badness 10000) in paragraph at lines 17877--17879
[]\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 http : / / www
 . unicode . org / reports / tr35 /
[274] [275] [276] [277] [278] [279] [280] [281] [282]
Underfull \hbox (badness 1442) in paragraph at lines 18477--18479
[]\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed 
and by [][]\T1/zi4/m/n/10 dev.new[][][]\T1/ptm/m/n/10 : see
[283]
Underfull \hbox (badness 2452) in paragraph at lines 18569--18585
[][][]\T1/zi4/m/n/10 as.character[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.c
omplex[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.double[][][]\T1/ptm/m/n/10 ,
 [][]\T1/zi4/m/n/10 as.integer[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.logi
cal[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.raw[][][]\T1/ptm/m/n/10 , [][]\
T1/zi4/m/n/10 as.vector[][][]\T1/ptm/m/n/10 ,
[284] [285] [286] [287] [288] [289] [290]
Underfull \hbox (badness 1248) in paragraph at lines 18988--18991
[]\T1/zi4/m/n/10 is.atomic \T1/ptm/m/n/10 is true for the [][]atomic[][][] type
s (\T1/zi4/m/n/10 "logical"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "integer"\T1/ptm/m/n
/10 , \T1/zi4/m/n/10 "numeric"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "complex"\T1/ptm/
m/n/10 ,
[291] [292] [293] [294]
Underfull \hbox (badness 4739) in paragraph at lines 19246--19248
[]\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere
d, see
[295] [296] [297] [298] [299] [300]
Underfull \hbox (badness 1596) in paragraph at lines 19665--19670
\T1/ptm/m/n/10 trix or, if \T1/zi4/m/n/10 simplify = "array"\T1/ptm/m/n/10 , an
 ar-ray if ap-pro-pri-ate, by ap-ply-ing \T1/zi4/m/n/10 simplify2array()\T1/ptm
/m/n/10 .
[301] [302] [303] [304] [305] [306] [307] [308] [309] [310] [311]
Underfull \hbox (badness 2469) in paragraph at lines 20269--20274
[]\T1/ptm/m/n/10 In late 2017 a \T1/zi4/m/n/10 libcurl \T1/ptm/m/n/10 in-stal-l
a-tion was seen di-vided into two li-braries, \T1/zi4/m/n/10 libcurl \T1/ptm/m/
n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 20283--20290
[][][]$\T1/zi4/m/n/10 http : / / curl . haxx . se / docs / sslcerts . html$[][]
 \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 http : / / curl . haxx . se / docs /
[312]
Underfull \hbox (badness 10000) in paragraph at lines 20357--20361
[]\T1/ptm/m/n/10 By de-fault \T1/zi4/m/n/10 R_LIBS \T1/ptm/m/n/10 is un-set, an
d \T1/zi4/m/n/10 R_LIBS_USER \T1/ptm/m/n/10 is set to di-rec-tory

Underfull \hbox (badness 2460) in paragraph at lines 20357--20361
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 R/\T1/ptm/m/sl/10 R.version$platform\T1/zi4/m/n/
10 -library/\T1/ptm/m/sl/10 x.y\T1/ptm/m/n/10 ' of the home di-rec-tory (or `\T
1/zi4/m/n/10 Library/R/\T1/ptm/m/sl/10 x.y\T1/zi4/m/n/10 /library\T1/ptm/m/n/10
 '
[313] [314]
Underfull \hbox (badness 1014) in paragraph at lines 20527--20532
[]\T1/ptm/m/n/10 Normally \T1/zi4/m/n/10 library \T1/ptm/m/n/10 re-turns (in-vi
s-i-bly) the list of at-tached pack-ages, but \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/1
0 or \T1/zi4/m/n/10 FALSE \T1/ptm/m/n/10 if
[315] [316] [317] [318] [319] [320] [321] [322] [323] [324] [325] [326]
Underfull \hbox (badness 1264) in paragraph at lines 21317--21322
[]\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways 
be sup-ported:
[327]
Underfull \hbox (badness 4441) in paragraph at lines 21346--21349
[]\T1/ptm/m/n/10 Note that set-ting cat-e-gory \T1/zi4/m/n/10 "LC_ALL" \T1/ptm/
m/n/10 sets only cat-e-gories \T1/zi4/m/n/10 "LC_COLLATE"\T1/ptm/m/n/10 , \T1/z
i4/m/n/10 "LC_CTYPE"\T1/ptm/m/n/10 ,
[328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338]
Underfull \hbox (badness 6047) in paragraph at lines 22093--22095
[]\T1/ptm/m/n/10 The al-go-rithm used by \T1/zi4/m/n/10 make.unique \T1/ptm/m/n
/10 has the prop-erty that \T1/zi4/m/n/10 make.unique(c(A,B)) ==
[339] [340] [341] [342] [343] [344] [345] [346] [347] [348] [349] [350]
[351] [352] [353] [354] [355]
Underfull \hbox (badness 1077) in paragraph at lines 23134--23140
\T1/zi4/m/n/10 / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm/m/n/10 , [][
]$\T1/zi4/m/n/10 http : / / tukaani . org / xz/$[][] \T1/ptm/m/n/10 and [][]$\T
1/zi4/m/n/10 https : / / en . wikipedia .
[356] [357] [358] [359] [360] [361] [362] [363]
Underfull \hbox (badness 2790) in paragraph at lines 23630--23633
[]\T1/zi4/m/n/10 packageStartupMessage \T1/ptm/m/n/10 is a vari-ant whose mes-s
ages can be sup-pressed sep-a-rately by

Underfull \hbox (badness 1571) in paragraph at lines 23630--23633
\T1/zi4/m/n/10 suppressPackageStartupMessages\T1/ptm/m/n/10 . (They are still m
es-sages, so can be sup-pressed by
[364] [365] [366] [367] [368]
Underfull \hbox (badness 1194) in paragraph at lines 23912--23915
[]\T1/ptm/m/n/10 The de-fault method for \T1/zi4/m/n/10 anyNA \T1/ptm/m/n/10 ha
n-dles atomic vec-tors with-out a class and \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 .
 It calls
[369] [370] [371]
Underfull \hbox (badness 2368) in paragraph at lines 24118--24124
[]\T1/ptm/m/n/10 For an [][]\T1/zi4/m/n/10 environment[][][] env\T1/ptm/m/n/10 
, \T1/zi4/m/n/10 names(env) \T1/ptm/m/n/10 gives the names of the cor-re-spond-
ing list, i.e.,

Underfull \hbox (badness 4981) in paragraph at lines 24118--24124
\T1/zi4/m/n/10 names(as.list(env,all.names = TRUE)) \T1/ptm/m/n/10 which are al
so given by [][]\T1/zi4/m/n/10 ls[][][](env,all.names =
[372] [373] [374] [375] [376] [377]
Underfull \hbox (badness 10000) in paragraph at lines 24500--24503
[]\T1/ptm/m/n/10 optional [][]\T1/zi4/m/n/10 logical[][][] \T1/ptm/m/n/10 even-
tu-ally to be passed to \T1/zi4/m/n/10 print()\T1/ptm/m/n/10 , used by
[378] [379] [380] [381] [382] [383] [384] [385] [386]
Underfull \hbox (badness 10000) in paragraph at lines 25105--25107
[]\T1/zi4/m/n/10 isNamespaceLoaded(pkg) \T1/ptm/m/n/10 is equiv-a-lent to but m
ore ef-fi-cient than \T1/zi4/m/n/10 pkg %in%
[387] [388] [389] [390] [391] [392] [393] [394] [395] [396] [397] [398]
[399]
Underfull \hbox (badness 1038) in paragraph at lines 25945--25953
[]\T1/ptm/m/n/10 the pack-ages that are at-tached by de-fault when \T1/phv/m/n/
10 R \T1/ptm/m/n/10 starts up. Ini-tially

Underfull \hbox (badness 1735) in paragraph at lines 25945--25953
\T1/ptm/m/n/10 set from value of the en-vi-ron-ment vari-able \T1/zi4/m/n/10 R_
DEFAULT_PACKAGES\T1/ptm/m/n/10 , or if that is un-

Underfull \hbox (badness 1292) in paragraph at lines 25945--25953
\T1/ptm/m/n/10 set to \T1/zi4/m/n/10 c("datasets","utils","grDevices","graphics
","stats","methods")\T1/ptm/m/n/10 . (Set

Underfull \hbox (badness 1881) in paragraph at lines 25954--25957
[]\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str
ucts which are

Underfull \hbox (badness 6220) in paragraph at lines 25973--25975
[]\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see

[400] [401]
Underfull \hbox (badness 2142) in paragraph at lines 26114--26118
[]\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][]\T1/zi4/m/n/10 postscr
ipt[][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able

Underfull \hbox (badness 1968) in paragraph at lines 26164--26169
[]\T1/ptm/m/n/10 the com-mand used by [][]\T1/zi4/m/n/10 postscript[][][] \T1/p
tm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able
[402] [403] [404] [405]
Underfull \hbox (badness 10000) in paragraph at lines 26452--26458
[]\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][]\T1/zi4/m/
n/10 setRepositories[][][]\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 26452--26458
\T1/ptm/m/n/10 e.g. the de-fault `\T1/zi4/m/n/10 "https://bioconductor.org"\T1/
ptm/m/n/10 ' or the Eu-ro-pean mir-ror

Underfull \hbox (badness 10000) in paragraph at lines 26452--26458
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de"\
T1/ptm/m/n/10 '. Can be set by

Underfull \hbox (badness 10000) in paragraph at lines 26465--26468
[]\T1/ptm/m/n/10 default Cc: ad-dress used by [][]\T1/zi4/m/n/10 create.post[][
][] \T1/ptm/m/n/10 (and hence[][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/n/10
 and

Underfull \hbox (badness 2689) in paragraph at lines 26491--26493
[]\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na
l HTTP server, see

Underfull \hbox (badness 10000) in paragraph at lines 26526--26531
[]\T1/ptm/m/n/10 Used by [][]\T1/zi4/m/n/10 install.packages[][][] \T1/ptm/m/n/
10 (and in-di-rectly

Underfull \hbox (badness 2529) in paragraph at lines 26532--26543
\T1/ptm/m/n/10 in-di-rectly [][]\T1/zi4/m/n/10 update.packages[][][]\T1/ptm/m/n
/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si-

Underfull \hbox (badness 2512) in paragraph at lines 26532--26543
\T1/ptm/m/n/10 ble val-ues are \T1/zi4/m/n/10 "never"\T1/ptm/m/n/10 , \T1/zi4/m
/n/10 "interactive" \T1/ptm/m/n/10 (which means ask in in-ter-ac-tive use and
[406]
Underfull \hbox (badness 7203) in paragraph at lines 26544--26547
[]\T1/ptm/m/n/10 default email-ing method used by [][]\T1/zi4/m/n/10 create.pos
t[][][] \T1/ptm/m/n/10 and hence [][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/
n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 26568--26573
[]\T1/zi4/m/n/10 "source" \T1/ptm/m/n/10 (the de-fault ex-cept un-der a CRAN ma
-cOS build),

Underfull \hbox (badness 2057) in paragraph at lines 26568--26573
\T1/zi4/m/n/10 "mac.binary.el-capitan" \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "both"
 \T1/ptm/m/n/10 (the de-fault for CRAN ma-cOS builds).
[407] [408] [409] [410] [411] [412] [413] [414]
Underfull \hbox (badness 10000) in paragraph at lines 27086--27089
[]\T1/zi4/m/n/10 str2expression(s) \T1/ptm/m/n/10 and \T1/zi4/m/n/10 str2lang(s
) \T1/ptm/m/n/10 re-turn spe-cial ver-sions of
[415]
Underfull \hbox (badness 7925) in paragraph at lines 27165--27169
[]\T1/ptm/m/n/10 for a [][]\T1/zi4/m/n/10 character[][][] \T1/ptm/m/n/10 vec-to
r \T1/zi4/m/n/10 s\T1/ptm/m/n/10 , \T1/zi4/m/n/10 str2expression(s) \T1/ptm/m/n
/10 cor-re-sponds to

Underfull \hbox (badness 1622) in paragraph at lines 27165--27169
[][]\T1/zi4/m/n/10 parse[][][](text = s,keep.source=FALSE)\T1/ptm/m/n/10 , whic
h is al-ways of type ([][]\T1/zi4/m/n/10 typeof[][][]\T1/ptm/m/n/10 ) and [][]\
T1/zi4/m/n/10 class[][][]

Underfull \hbox (badness 6125) in paragraph at lines 27170--27179
[]\T1/ptm/m/n/10 for a [][]\T1/zi4/m/n/10 character[][][] \T1/ptm/m/n/10 string
 \T1/zi4/m/n/10 s\T1/ptm/m/n/10 , \T1/zi4/m/n/10 str2lang(s) \T1/ptm/m/n/10 cor
-re-sponds to [][]\T1/zi4/m/n/10 parse[][][](text =
[416] [417] [418] [419] [420] [421] [422] [423] [424] [425] [426]
Underfull \hbox (badness 2726) in paragraph at lines 27891--27894
[]\T1/ptm/m/n/10 character string (or \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 ) in-di
-cat-ing [][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 val-ues in printed out-put,
 see
[427] [428] [429] [430] [431] [432] [433] [434] [435] [436] [437] [438]
[439] [440] [441] [442] [443] [444]
Underfull \vbox (badness 3803) has occurred while \output is active [445]
[446] [447] [448] [449] [450] [451] [452]
Underfull \hbox (badness 1533) in paragraph at lines 29582--29585
[]\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca
n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the
[453] [454] [455]
Underfull \hbox (badness 1163) in paragraph at lines 29745--29756
[]\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no \T1/zi4/m/n/10 NA\
T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in
[456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467]
[468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479]
Underfull \hbox (badness 10000) in paragraph at lines 31291--31295
[]\T1/zi4/m/n/10 regexpr \T1/ptm/m/n/10 and \T1/zi4/m/n/10 gregexpr \T1/ptm/m/n
/10 sup-port `named cap-ture'. If groups are named, e.g.,

Underfull \hbox (badness 1221) in paragraph at lines 31291--31295
\T1/zi4/m/n/10 "(?<first>[A-Z][a-z]+)" \T1/ptm/m/n/10 then the po-si-tions of t
he matches are also re-turned by name.

Underfull \hbox (badness 6188) in paragraph at lines 31313--31315
[]\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 http : / / p
ubs . opengroup . org / onlinepubs / 9699919799 /
[480] [481] [482] [483] [484] [485] [486] [487] [488]
Underfull \hbox (badness 1655) in paragraph at lines 31869--31871
[]\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for \T1/zi4/m/n/10 rle()\T1/ptm
/m/n/10 ; an ob-ject of class \T1/zi4/m/n/10 "rle" \T1/ptm/m/n/10 for
[489] [490] [491] [492] [493] [494] [495] [496] [497] [498] [499] [500]
[501] [502] [503] [504] [505]
Underfull \hbox (badness 2261) in paragraph at lines 32988--32993
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 strip.white \T1/ptm/m/n/10 is of length 1, i
t ap-plies to all fields; oth-er-wise, if
[506]
Underfull \hbox (badness 10000) in paragraph at lines 33015--33021
[]\T1/ptm/m/n/10 The es-capes which are in-ter-preted are the con-trol char-ac-
ters

Underfull \hbox (badness 1484) in paragraph at lines 33015--33021
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 \a,\b,\f,\n,\r,\t,\v\T1/ptm/m/n/10 ' and oc-tal 
and hex-adec-i-mal rep-re-sen-ta-tions like
[507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518]
[519] [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530]
[531] [532] [533] [534] [535] [536] [537] [538] [539] [540] [541] [542]
[543] [544] [545] [546] [547] [548] [549] [550] [551] [552] [553] [554]
Underfull \hbox (badness 1072) in paragraph at lines 36157--36161
[]\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea
d from the file spec-i-fied by

Underfull \hbox (badness 10000) in paragraph at lines 36162--36166
[]\T1/ptm/m/n/10 The command-line op-tion `\T1/zi4/m/n/10 --vanilla\T1/ptm/m/n/
10 ' im-plies `\T1/zi4/m/n/10 --no-site-file\T1/ptm/m/n/10 ', `\T1/zi4/m/n/10 -
-no-init-file\T1/ptm/m/n/10 ',

Underfull \hbox (badness 10000) in paragraph at lines 36190--36196
[]\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file
s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 '

Underfull \hbox (badness 10000) in paragraph at lines 36190--36196
\T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for
 first in architecture-specific di-rec-to-ries,

Underfull \hbox (badness 1320) in paragraph at lines 36190--36196
\T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R
environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/
n/10 ' will be used in

Underfull \hbox (badness 3009) in paragraph at lines 36202--36209
[]\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is 
also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt
m/m/n/10 ' which is read

Underfull \hbox (badness 1038) in paragraph at lines 36202--36209
\T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron-
ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the

Underfull \hbox (badness 2573) in paragraph at lines 36202--36209
\T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i
n site or user en-vi-ron-ment

Underfull \hbox (badness 1917) in paragraph at lines 36202--36209
\T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/
n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from
[555] [556] [557] [558] [559] [560]
Underfull \hbox (badness 1142) in paragraph at lines 36556--36562
[]\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the \T1/zi4/m/n/10 form
at \T1/ptm/m/n/10 meth-ods is \T1/zi4/m/n/10 "%Y-%m-%d
[561] [562] [563] [564] [565] [566] [567] [568] [569] [570] [571] [572]
[573] [574] [575] [576] [577] [578] [579] [580]
Underfull \hbox (badness 1565) in paragraph at lines 37829--37831
[]\T1/ptm/m/n/10 integer code used in \T1/zi4/m/n/10 quantile(*,type=quantile.t
ype) \T1/ptm/m/n/10 for the de-fault
[581] [582] [583] [584] [585] [586] [587] [588] [589] [590]
Underfull \hbox (badness 4967) in paragraph at lines 38428--38433
[]\T1/ptm/m/n/10 If a file-name starts with \T1/zi4/m/n/10 . \T1/ptm/m/n/10 thi
s may need to be matched ex-plic-itly: for ex-am-ple
[591] [592]
Underfull \hbox (badness 1616) in paragraph at lines 38541--38546
\T1/zi4/m/n/10 system("id") \T1/ptm/m/n/10 is much more portable on Unix-alikes
, pro-vided only the POSIX op-tions
[593] [594] [595] [596] [597] [598] [599] [600]
Underfull \hbox (badness 1472) in paragraph at lines 39067--39070
[]\T1/ptm/m/n/10 logical. If \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , func-tions kee
p their source in-clud-ing com-ments, see
[601] [602] [603] [604] [605] [606] [607] [608] [609] [610] [611] [612]
[613] [614]
Underfull \hbox (badness 10000) in paragraph at lines 39981--39985
[]\T1/ptm/m/n/10 On 64-bit plat-forms \T1/zi4/m/n/10 bin \T1/ptm/m/n/10 can hav
e $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., \T1/zi4/m/n/10
 length(bin) >
[615] [616] [617] [618]
Underfull \hbox (badness 10000) in paragraph at lines 40232--40235
[][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [
][]$https : / / developer . r-[]project . org /
[619] [620] [621]
Underfull \hbox (badness 10000) in paragraph at lines 40416--40420
[][][]\T1/zi4/m/n/10 addTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 r
emoveTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 taskCallbackManager[
][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer .
[622] [623] [624] [625] [626] [627] [628] [629] [630]
Underfull \hbox (badness 10000) in paragraph at lines 41029--41032
[][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][
] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[
]zones /
[631] [632] [633] [634] [635] [636]
Underfull \vbox (badness 10000) has occurred while \output is active [637]
[638] [639] [640] [641] [642] [643] [644]
Underfull \hbox (badness 1990) in paragraph at lines 41933--41941
[]\T1/zi4/m/n/10 try \T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any e
r-rors that oc-cur dur-ing the eval-u-a-tion. If

Underfull \hbox (badness 4846) in paragraph at lines 41933--41941
\T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][
]\T1/zi4/m/n/10 stderr[][][] \T1/ptm/m/n/10 con-nec-tion un-less
[645] [646] [647] [648] [649] [650] [651] [652]
Underfull \hbox (badness 1917) in paragraph at lines 42439--42446
[]\T1/ptm/m/n/10 When a func-tion call-ing \T1/zi4/m/n/10 UseMethod("fun") \T1/
ptm/m/n/10 is ap-plied to an ob-ject with class at-tribute
[653] [654] [655] [656] [657] [658] [659] [660] [661] [662] [663]
Underfull \hbox (badness 3668) in paragraph at lines 43168--43170
[]\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di-
ately, even if
[664] [665]
Underfull \hbox (badness 2401) in paragraph at lines 43296--43300
[]\T1/ptm/m/n/10 See the de-scrip-tion of [][]\T1/zi4/m/n/10 options[][][]("war
n") \T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a
[666] [667] [668]
Underfull \hbox (badness 2111) in paragraph at lines 43485--43490
\T1/ptm/m/n/10 If [][]\T1/zi4/m/n/10 names[][][](.dimnames) \T1/ptm/m/n/10 is n
ot empty, these are used as col-umn names.

Underfull \hbox (badness 10000) in paragraph at lines 43506--43511
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 arr.ind == TRUE \T1/ptm/m/n/10 and \T1/zi4/m
/n/10 x \T1/ptm/m/n/10 is an [][]\T1/zi4/m/n/10 array[][][] \T1/ptm/m/n/10 (has
 a [][]\T1/zi4/m/n/10 dim[][][] \T1/ptm/m/n/10 at-tribute), the re-sult is
[669] [670] [671] [672] [673] [674] [675] [676] [677]
Underfull \hbox (badness 5417) in paragraph at lines 44088--44092
[]\T1/zi4/m/n/10 .packages() \T1/ptm/m/n/10 re-turns the names of the cur-rentl
y at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas
[678]
Underfull \hbox (badness 10000) in paragraph at lines 44149--44153
[]\T1/zi4/m/n/10 .standard_regexps \T1/ptm/m/n/10 re-turns a list of `stan-dard
' reg-exps, in-clud-ing el-e-ments named
[679] [680]) (./compiler-pkg.tex
Chapter 2.
[681] [682] [683] [684]) (./datasets-pkg.tex
Chapter 3.
[685] [686] [687] [688] [689] [690] [691] [692] [693] [694] [695] [696]
[697] [698] [699] [700] [701]
Underfull \hbox (badness 1097) in paragraph at lines 1031--1035
[]\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th
e iden-ti-fi-ca-tion of crim-i-nals.
[702] [703] [704] [705] [706] [707] [708] [709] [710] [711] [712] [713]
[714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724]
Underfull \vbox (badness 1448) has occurred while \output is active [725]
[726] [727] [728] [729] [730] [731] [732] [733] [734] [735] [736]
Overfull \vbox (19.74611pt too high) has occurred while \output is active
[737] [738] [739] [740] [741] [742] [743] [744] [745] [746] [747] [748]
[749] [750] [751] [752]
Underfull \vbox (badness 10000) has occurred while \output is active [753]
[754] [755] [756]
Underfull \vbox (badness 10000) has occurred while \output is active [757]
[758] [759] [760] [761] [762] [763] [764] [765] [766]) (./grDevices-pkg.tex
Chapter 4.
[767] [768] [769] [770] [771]
Underfull \hbox (badness 3158) in paragraph at lines 282--286
[]\T1/ptm/m/n/10 numeric vec-tor of length 3, \T1/zi4/m/n/10 c(mi,ma,n.)\T1/ptm
/m/n/10 , with iden-ti-cal mean-ing to

Underfull \hbox (badness 10000) in paragraph at lines 298--303
[]\T1/ptm/m/n/10 Apart from that, [][]\T1/zi4/m/n/10 axisTicks[][][]() \T1/ptm/
m/n/10 just calls the C func-tion \T1/zi4/m/n/10 CreateAtVector() \T1/ptm/m/n/1
0 in

Underfull \hbox (badness 1852) in paragraph at lines 298--303
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 <Rsrc>/src/main/plot.c\T1/ptm/m/n/10 ' which is 
also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t
ion
[772] [773] [774] [775] [776] [777] [778] [779]
Underfull \hbox (badness 1424) in paragraph at lines 830--832
[][][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) and 
\T1/zi4/m/n/10 "NA" \T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i
-fied as
[780] [781] [782] [783] [784]
Underfull \hbox (badness 5175) in paragraph at lines 1124--1126
[]\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm
. The source code is in
[785] [786] [787] [788]
Underfull \hbox (badness 1852) in paragraph at lines 1326--1329
[]\T1/zi4/m/n/10 densCols \T1/ptm/m/n/10 com-putes and re-turns the set of col-
ors that will be used in plot-ting, call-ing
[789] [790] [791]
Underfull \hbox (badness 1490) in paragraph at lines 1532--1537
\T1/ptm/m/n/10 by [][]\T1/zi4/m/n/10 rasterImage[][][] \T1/ptm/m/n/10 and [][]\
T1/zi4/m/n/10 grid.raster[][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues \T1/zi4/m/n/
10 "no"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "yes" \T1/ptm/m/n/10 and
[792] [793] [794] [795] [796] [797]
Underfull \hbox (badness 1325) in paragraph at lines 1938--1948
\T1/zi4/m/n/10 "png48"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pngmono"\T1/ptm/m/n/10 ,
 \T1/zi4/m/n/10 "pnggray"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pngalpha"\T1/ptm/m/n/
10 , \T1/zi4/m/n/10 "bmp16"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "bmp16m" "bmp256"\T1
/ptm/m/n/10 , \T1/zi4/m/n/10 "bmp32b"\T1/ptm/m/n/10 ,
[798] [799]
Underfull \hbox (badness 10000) in paragraph at lines 2050--2052
[]\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the 
set-ting of
[800] [801] [802]
Underfull \hbox (badness 6758) in paragraph at lines 2228--2231
[]\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript
 doc-u-men-ta-tion) are
[803] [804] [805] [806] [807] [808] [809] [810] [811] [812]
Underfull \hbox (badness 10000) in paragraph at lines 2832--2833

[813] [814] [815] [816] [817] [818] [819] [820] [821]
Underfull \hbox (badness 10000) in paragraph at lines 3388--3393
[]\T1/zi4/m/n/10 nclass.FD \T1/ptm/m/n/10 uses the Freedman-Diaconis choice bas
ed on the inter-quartile range
[822] [823] [824] [825] [826]
Underfull \vbox (badness 10000) has occurred while \output is active [827]
Underfull \hbox (badness 10000) in paragraph at lines 3789--3792
[]\T1/ptm/m/n/10 For use with \T1/zi4/m/n/10 onefile = FALSE \T1/ptm/m/n/10 giv
e a C in-te-ger for-mat such as
[828] [829] [830] [831] [832] [833] [834] [835] [836] [837] [838]
Underfull \hbox (badness 10000) in paragraph at lines 4518--4523
[][][]$\T1/zi4/m/n/10 https : / / www . adobe . com / content / dam / acom / en
 / devnet / actionscript / articles / PLRM . pdf$[][]

Underfull \hbox (badness 4181) in paragraph at lines 4518--4523
\T1/ptm/m/n/10 or PDF [][]$\T1/zi4/m/n/10 https : / / www . adobe . com / devne
t / acrobat / pdfs / pdf _ reference _ 1-[]7 . pdf$[][] \T1/ptm/m/n/10 and in
[839]
Underfull \vbox (badness 10000) has occurred while \output is active [840]
[841]
Underfull \hbox (badness 1067) in paragraph at lines 4672--4679
\T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled
 with sup-
[842] [843] [844] [845]
Underfull \hbox (badness 1377) in paragraph at lines 4975--4980
[]\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently 
al-lowed val-ues
[846]
Underfull \hbox (badness 1418) in paragraph at lines 5051--5058
\T1/ptm/m/n/10 it is one of \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4
/m/n/10 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/
zi4/m/n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm
/m/n/10 ,

Underfull \hbox (badness 1755) in paragraph at lines 5069--5071
[]\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East 
Asian lan-guages -- see
[847] [848]
Underfull \hbox (badness 1377) in paragraph at lines 5180--5185
[]\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are \
T1/zi4/m/n/10 "rgb" \T1/ptm/m/n/10 (which is RGB+gray) and
[849]
Underfull \hbox (badness 7344) in paragraph at lines 5249--5251
[]\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t
ion by Brian D'Urso
[850] [851]
Underfull \hbox (badness 2035) in paragraph at lines 5384--5393
[]\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv
-a-lents) are also pro-

Underfull \hbox (badness 10000) in paragraph at lines 5384--5393
\T1/ptm/m/n/10 vided: \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/zi4/m/
n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm/m/n/1
0 ,

Underfull \hbox (badness 10000) in paragraph at lines 5384--5393
\T1/zi4/m/n/10 "NewCenturySchoolbook"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Palatino"
 \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "Times"\T1/ptm/m/n/10 ; \T1/zi4/m/n/10 "URWG
othic"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "URWBookman"\T1/ptm/m/n/10 ,
[852]
Underfull \hbox (badness 10000) in paragraph at lines 5452--5459
[]\T1/zi4/m/n/10 BousungEG-Light-GB \T1/ptm/m/n/10 can be found at [][]$\T1/zi4
/m/n/10 ftp : / / ftp . gnu . org / pub / non-[]gnu /

Underfull \hbox (badness 2189) in paragraph at lines 5452--5459
\T1/zi4/m/n/10 chinese-[]fonts-[]truetype/$[][]\T1/ptm/m/n/10 . Ken Lunde's CJK
V re-sources are at [][]$\T1/zi4/m/n/10 ftp : / / ftp . oreilly .
[853] [854] [855]
Underfull \hbox (badness 1546) in paragraph at lines 5594--5602
[]\T1/ptm/m/n/10 arguments \T1/zi4/m/n/10 onefile\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 family\T1/ptm/m/n/10 , \T1/zi4/m/n/10 title\T1/ptm/m/n/10 , \T1/zi4/m/n/10 fo
nts\T1/ptm/m/n/10 , \T1/zi4/m/n/10 encoding\T1/ptm/m/n/10 , \T1/zi4/m/n/10 bg\T
1/ptm/m/n/10 , \T1/zi4/m/n/10 fg\T1/ptm/m/n/10 , \T1/zi4/m/n/10 width\T1/ptm/m/
n/10 ,
[856] [857] [858] [859] [860] [861] [862] [863]
Underfull \hbox (badness 10000) in paragraph at lines 6129--6132
[]\T1/zi4/m/n/10 rgb2hsv \T1/ptm/m/n/10 trans-forms col-ors from RGB space (red
/green/blue) into HSV space
[864] [865] [866] [867] [868] [869] [870] [871] [872] [873] [874] [875]
[876]
Underfull \hbox (badness 1189) in paragraph at lines 6951--6953
[]\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used
. One of
[877]
Underfull \hbox (badness 10000) in paragraph at lines 7049--7051
[]\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" \T1/ptm/m/n/10 for CJK 
lan-guages and
[878] [879] [880] [881] [882]
Underfull \hbox (badness 3780) in paragraph at lines 7349--7355
[]\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of \T1/zi4/m/n/1
0 "AvantGarde"\T1/ptm/m/n/10 ,
[883] [884] [885]
Underfull \hbox (badness 2680) in paragraph at lines 7550--7552
[]\T1/ptm/m/n/10 multiplicities (pos-i-tive in-te-gers); i.e., \T1/zi4/m/n/10 n
umber[i] \T1/ptm/m/n/10 is the mul-ti-plic-ity of
[886] [887] [888]) (./graphics-pkg.tex
Chapter 5.
[889] [890] [891] [892] [893] [894] [895] [896] [897] [898] [899] [900]
[901] [902] [903] [904] [905] [906] [907] [908] [909] [910]
Underfull \hbox (badness 4634) in paragraph at lines 1351--1354
[][][]\T1/zi4/m/n/10 boxplot.default[][][] \T1/ptm/m/n/10 which al-ready works 
nowa-days with data.frames; [][]\T1/zi4/m/n/10 boxplot.formula[][][]\T1/ptm/m/n
/10 ,
[911] [912] [913] [914] [915] [916] [917] [918] [919] [920] [921] [922]
[923] [924] [925] [926]
Underfull \hbox (badness 1728) in paragraph at lines 2308--2310
[]\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use \T1/zi4/m/n/10 "n
" \T1/ptm/m/n/10 to sup-press and see also
[927] [928]
Underfull \hbox (badness 1009) in paragraph at lines 2399--2406
\T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n
ot ap-ply to
[929] [930] [931] [932] [933] [934] [935] [936] [937] [938] [939] [940]
[941] [942] [943] [944] [945] [946] [947] [948] [949] [950]
Underfull \vbox (badness 10000) has occurred while \output is active [951]
[952] [953] [954] [955] [956] [957] [958] [959] [960] [961] [962] [963]
Underfull \hbox (badness 3229) in paragraph at lines 4544--4549
[]\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are 
to be used, see
[964] [965] [966] [967] [968]
Underfull \hbox (badness 10000) in paragraph at lines 4901--4907
[]\T1/ptm/b/it/10 R.O.\T1/ptm/m/n/10 ; size of de-fault char-ac-ter \T1/zi4/m/n
/10 (width,height) \T1/ptm/m/n/10 in user co-or-di-nate units.

Underfull \hbox (badness 5908) in paragraph at lines 4901--4907
\T1/zi4/m/n/10 par("cxy") \T1/ptm/m/n/10 is \T1/zi4/m/n/10 par("cin")/par("pin"
) \T1/ptm/m/n/10 scaled to user co-or-di-nates. Note that
[969]
Underfull \hbox (badness 10000) in paragraph at lines 5032--5035

[970]
Underfull \hbox (badness 10000) in paragraph at lines 5093--5095

[971 </<<PKGBUILDDIR>>/library/graphics/help/figures/
mai.pdf>] [972 </<<PKGBUILDDIR>>/library/graphics/hel
p/figures/oma.pdf>] [973]
Underfull \hbox (badness 10000) in paragraph at lines 5283--5285
[]\T1/ptm/m/n/10 The five stan-dard dash-dot line types (\T1/zi4/m/n/10 lty = 2
:6\T1/ptm/m/n/10 ) cor-re-spond to
[974]
Underfull \vbox (badness 3803) has occurred while \output is active [975]
[976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987]
[988] [989] [990] [991] [992] [993] [994] [995] [996]
Overfull \hbox (31.57222pt too wide) in paragraph at lines 6761--6762
[][] 
[997] [998 </<<PKGBUILDDIR>>/library/graphics/help/fi
gures/pch.pdf>] [999] [1000] [1001] [1002] [1003] [1004] [1005] [1006] [1007]
[1008] [1009] [1010]
Underfull \hbox (badness 2012) in paragraph at lines 7586--7589
[]\T1/ptm/m/n/10 For each \T1/zi4/m/n/10 i\T1/ptm/m/n/10 , a line seg-ment is d
rawn be-tween the point \T1/zi4/m/n/10 (x0[i],y0[i]) \T1/ptm/m/n/10 and the poi
nt
[1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021]
[1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031]
Underfull \hbox (badness 10000) in paragraph at lines 8846--8848
[]\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color

Underfull \hbox (badness 10000) in paragraph at lines 8848--8850
[]\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color
[1032]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.uni
ts}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.8928 \HeaderA{units}{Graphical Units}{units}
                                               [1033] [1034] [1035] [1036])
(./grid-pkg.tex
Chapter 6.

Underfull \vbox (badness 10000) has occurred while \output is active [1037]
[1038] [1039] [1040] [1041] [1042] [1043] [1044]
Underfull \hbox (badness 2680) in paragraph at lines 483--486
[]\T1/ptm/m/n/10 Note that \T1/zi4/m/n/10 preDrawDetails \T1/ptm/m/n/10 and \T1
/zi4/m/n/10 postDrawDetails \T1/ptm/m/n/10 are also called in the cal-cu-la-tio
n of
[1045] [1046] [1047] [1048] [1049] [1050] [1051] [1052] [1053] [1054]
Underfull \hbox (badness 4279) in paragraph at lines 1064--1073
[][][]\T1/ptm/m/n/10 Grid[][][], [][]\T1/zi4/m/n/10 pushViewport[][][]\T1/ptm/m
/n/10 , [][]\T1/zi4/m/n/10 popViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10
 downViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 seekViewport[][][]\T1/pt
m/m/n/10 , [][]\T1/zi4/m/n/10 upViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/
10 unit[][][]\T1/ptm/m/n/10 ,
[1055] [1056] [1057] [1058] [1059] [1060] [1061] [1062] [1063] [1064] [1065]
[1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] [1076]
[1077] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087]
[1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098]
Underfull \vbox (badness 10000) has occurred while \output is active [1099]
[1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110]
[1111] [1112]
Underfull \hbox (badness 1067) in paragraph at lines 4486--4489
[]\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec
t de-scrib-ing seg-ments), but only
[1113] [1114] [1115] [1116]
Underfull \hbox (badness 7256) in paragraph at lines 4731--4733
[]\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject
s are co-erced by
[1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] [1127]
[1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] [1137] [1138]
[1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147]
Underfull \hbox (badness 1824) in paragraph at lines 6535--6538
[]\T1/ptm/m/n/10 This can be use-ful for re-turn-ing to your start-ing point by
 do-ing some-thing like \T1/zi4/m/n/10 depth
[1148] [1149] [1150] [1151]) (./methods-pkg.tex [1152]
Chapter 7.
[1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160]
Underfull \vbox (badness 10000) has occurred while \output is active [1161]
Underfull \vbox (badness 10000) has occurred while \output is active [1162]
[1163] [1164] [1165] [1166] [1167] [1168] [1169] [1170] [1171]
Underfull \hbox (badness 2237) in paragraph at lines 1385--1387
[]\T1/ptm/m/n/10 The class \T1/zi4/m/n/10 "className" \T1/ptm/m/n/10 ex-tends \
T1/zi4/m/n/10 "character" \T1/ptm/m/n/10 and has a slot \T1/zi4/m/n/10 "package
"\T1/ptm/m/n/10 , also of class
[1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179]
Underfull \hbox (badness 2181) in paragraph at lines 1932--1939
[]\T1/ptm/m/n/10 Two vir-tual classes are sup-plied to test for ref-er-ence ob-
jects: \T1/zi4/m/n/10 is(x,"refClass") \T1/ptm/m/n/10 tests
[1180]
Underfull \hbox (badness 10000) in paragraph at lines 1981--1986
[]\T1/ptm/m/n/10 The ar-gu-ment to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/10 c
an be an ob-ject of class

Underfull \hbox (badness 1038) in paragraph at lines 1981--1986
\T1/ptm/m/n/10 file name is passed to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/1
0 it calls \T1/zi4/m/n/10 evalSource \T1/ptm/m/n/10 to ob-tain the
[1181] [1182] [1183]
Underfull \hbox (badness 2213) in paragraph at lines 2214--2219
[]\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age
, use \T1/zi4/m/n/10 where =
[1184] [1185] [1186] [1187] [1188]
Underfull \hbox (badness 10000) in paragraph at lines 2574--2577
[]\T1/ptm/m/n/10 As you might ex-pect [][]\T1/zi4/m/n/10 setGeneric[][][] \T1/p
tm/m/n/10 and [][]\T1/zi4/m/n/10 setGroupGeneric[][][] \T1/ptm/m/n/10 cre-ate o
b-jects of class
[1189] [1190]
Underfull \hbox (badness 1132) in paragraph at lines 2714--2718
[]\T1/ptm/m/n/10 In \T1/zi4/m/n/10 getGenerics\T1/ptm/m/n/10 , if \T1/zi4/m/n/1
0 TRUE\T1/ptm/m/n/10 , the \T1/zi4/m/n/10 package \T1/ptm/m/n/10 slot of the re
-turned re-sult is in
[1191]
Underfull \hbox (badness 1033) in paragraph at lines 2746--2751
\T1/ptm/m/n/10 In ad-di-tion, \T1/zi4/m/n/10 removeGeneric \T1/ptm/m/n/10 re-mo
ves the func-tion it-self; \T1/zi4/m/n/10 removeMethods \T1/ptm/m/n/10 re-store
s the
[1192] [1193] [1194] [1195] [1196] [1197] [1198]
Underfull \hbox (badness 1102) in paragraph at lines 3303--3305
[]\T1/zi4/m/n/10 getPackageName \T1/ptm/m/n/10 re-turns the character-string na
me of the pack-age (with-out the ex-tra-ne-ous
[1199] [1200] [1201] [1202] [1203]
Underfull \hbox (badness 10000) in paragraph at lines 3634--3639
[]\T1/ptm/m/n/10 The \T1/zi4/m/n/10 initialize \T1/ptm/m/n/10 method for these 
classes takes spe-cial ar-gu-ments
[1204]
Underfull \hbox (badness 10000) in paragraph at lines 3642--3651
[]\T1/ptm/m/n/10 The
[1205]
Underfull \hbox (badness 10000) in paragraph at lines 3762--3763
[] \T1/zi4/m/n/10 Pos <-setClass("Pos",slots = c(latitude = "numeric",longitude
 = "numeric",altitude
[1206] [1207] [1208] [1209] [1210] [1211] [1212] [1213] [1214] [1215] [1216]
Underfull \hbox (badness 1769) in paragraph at lines 4472--4478
[]\T1/ptm/m/n/10 class [][]\T1/zi4/m/n/10 MethodsList[][][] \T1/ptm/m/n/10 for 
the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar

Underfull \hbox (badness 1939) in paragraph at lines 4472--4478
\T1/zi4/m/n/10 MethodDefinition\T1/ptm/m/n/10 , or an ex-ten-sion. Class [][]\T
1/zi4/m/n/10 MethodWithNext[][][] \T1/ptm/m/n/10 for an ex-ten-sion used by
[1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226]
Underfull \vbox (badness 10000) has occurred while \output is active [1227]
[1228] [1229]
Underfull \hbox (badness 4036) in paragraph at lines 5437--5440
[]\T1/ptm/m/n/10 Object of class \T1/zi4/m/n/10 "PossibleMethod" \T1/ptm/m/n/10
 the method to use in re-sponse to a
[1230]
Underfull \hbox (badness 3803) in paragraph at lines 5512--5514
[]\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p
assed to
[1231] [1232] [1233] [1234]
Underfull \hbox (badness 1087) in paragraph at lines 5744--5749
[]\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o
ds for this class are found (us-ing
[1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242]
Underfull \hbox (badness 1675) in paragraph at lines 6451--6457
\T1/ptm/m/n/10 can be con-verted ex-plic-itly as \T1/zi4/m/n/10 externalRefMeth
od(f)\T1/ptm/m/n/10 , which re-turns an ob-ject of class
[1243] [1244] [1245] [1246]
Underfull \vbox (badness 10000) has occurred while \output is active [1247]
[1248] [1249] [1250]pdfTeX warning (ext4): destination with the same identifier
 (name{Rfn.S4}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.6973 \aliasA{S4}{S3Part}{S4}
                               [1251] [1252] [1253]pdfTeX warning (ext4): desti
nation with the same identifier (name{Rfn.Complex}) has been already used, dupl
icate ignored
<to be read again> 
                   \relax 
l.7229 \aliasA{Complex}{S4groupGeneric}{Complex}
                                                pdfTeX warning (ext4): destinat
ion with the same identifier (name{Rfn.Logic}) has been already used, duplicate
 ignored
<to be read again> 
                   \relax 
l.7231 \aliasA{Logic}{S4groupGeneric}{Logic}
                                            pdfTeX warning (ext4): destination 
with the same identifier (name{Rfn.Math}) has been already used, duplicate igno
red
<to be read again> 
                   \relax 
l.7232 \aliasA{Math}{S4groupGeneric}{Math}
                                          pdfTeX warning (ext4): destination wi
th the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored

<to be read again> 
                   \relax 
l.7234 \aliasA{Ops}{S4groupGeneric}{Ops}
                                        pdfTeX warning (ext4): destination with
 the same identifier (name{Rfn.Summary}) has been already used, duplicate ignor
ed
<to be read again> 
                   \relax 
l.7235 \aliasA{Summary}{S4groupGeneric}{Summary}
                                                 [1254]
Underfull \hbox (badness 2050) in paragraph at lines 7296--7300
[]\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic 
can be ob-tained by call-ing
[1255] [1256] [1257]
Underfull \hbox (badness 1286) in paragraph at lines 7484--7486
[]\T1/ptm/m/n/10 for \T1/zi4/m/n/10 .selectSuperClasses() \T1/ptm/m/n/10 only, 
a [][]\T1/zi4/m/n/10 list[][][] \T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cal
ly
[1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] [1266] [1267] [1268]
[1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] [1279]
[1280] [1281] [1282] [1283] [1284]
Underfull \vbox (badness 10000) has occurred while \output is active [1285]
[1286] [1287] [1288] [1289] [1290] [1291] [1292]
Underfull \hbox (badness 1137) in paragraph at lines 10011--10019
[]\T1/ptm/m/n/10 Objects can be cre-ated by calls of the form \T1/zi4/m/n/10 ne
w("signature",functionDef,...)\T1/ptm/m/n/10 . The
[1293] [1294] [1295] [1296] [1297] [1298] [1299]
Underfull \hbox (badness 1852) in paragraph at lines 10564--10568
[]\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl
ass, from the data part; e.g.,
[1300] [1301] [1302] [1303]) (./parallel-pkg.tex [1304]
Chapter 8.

Underfull \hbox (badness 5490) in paragraph at lines 14--16
[]\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `\T1/zi4
/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"\T1/ptm/m/n/10 ' [][]RNG[
][][]: see
[1305] [1306] [1307] [1308] [1309] [1310] [1311] [1312] [1313] [1314] [1315]
[1316] [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325]
Underfull \hbox (badness 3386) in paragraph at lines 1365--1368
[]\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by \T1/zi4/m/n/10 .R
andom.seed \T1/ptm/m/n/10 when the
[1326] [1327] [1328]) (./splines-pkg.tex
Chapter 9.

Underfull \hbox (badness 10000) in paragraph at lines 22--24
[]\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 <bates@stat.wisc.edu> \T1/ptm/
m/n/10 and William N. Ven-ables
[1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] [1338] [1339]
[1340] [1341] [1342] [1343] [1344]) (./stats-pkg.tex
Chapter 10.
[1345] [1346] [1347] [1348] [1349] [1350] [1351] [1352] [1353] [1354] [1355]
[1356] [1357] [1358]
Underfull \hbox (badness 1412) in paragraph at lines 875--877
[]\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from \T1/zi4/m/n/10 lm 
\T1/ptm/m/n/10 or \T1/zi4/m/n/10 aov\T1/ptm/m/n/10 , or a for-mula for
[1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366]
Underfull \hbox (badness 2503) in paragraph at lines 1356--1359
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1367] [1368] [1369]
Underfull \hbox (badness 10000) in paragraph at lines 1536--1540
[]\T1/ptm/m/n/10 An ob-ject of class \T1/zi4/m/n/10 c("aov","lm") \T1/ptm/m/n/1
0 or for mul-ti-ple re-sponses of class
[1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] [1379] [1380]
[1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391]
[1392] [1393] [1394] [1395] [1396] [1397] [1398] [1399]
Underfull \hbox (badness 2503) in paragraph at lines 3437--3440
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1400] [1401] [1402] [1403] [1404] [1405] [1406] [1407] [1408] [1409] [1410]
[1411] [1412] [1413] [1414]
Underfull \hbox (badness 1127) in paragraph at lines 4351--4354
[]\T1/ptm/m/n/10 standardized resid-u-als, \T1/zi4/m/n/10 (observed -expected) 
/ sqrt(V)\T1/ptm/m/n/10 , where \T1/zi4/m/n/10 V \T1/ptm/m/n/10 is the
[1415] [1416] [1417] [1418] [1419]
Underfull \hbox (badness 3989) in paragraph at lines 4681--4688
[]\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 
(\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/
it/10 g[] \OT1/cmr/m/n/10 =
[1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] [1428] [1429]
Underfull \hbox (badness 2556) in paragraph at lines 5317--5320
[]\T1/ptm/m/n/10 character; par-tially matched to \T1/zi4/m/n/10 "circular"\T1/
ptm/m/n/10 , \T1/zi4/m/n/10 "open"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "filter"\T1/p
tm/m/n/10 . For

Underfull \hbox (badness 2932) in paragraph at lines 5334--5336
[]\T1/ptm/m/n/10 Note that the usual def-i-ni-tion of con-vo-lu-tion of two se-
quences \T1/zi4/m/n/10 x \T1/ptm/m/n/10 and \T1/zi4/m/n/10 y \T1/ptm/m/n/10 is 
given by
[1430] [1431] [1432] [1433] [1434] [1435] [1436]
Underfull \hbox (badness 2503) in paragraph at lines 5726--5730
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447]
[1448] [1449]
Underfull \hbox (badness 7081) in paragraph at lines 6520--6523
[]\T1/ptm/m/n/10 Objects of class \T1/zi4/m/n/10 "hclust" \T1/ptm/m/n/10 can be
 con-verted to class \T1/zi4/m/n/10 "dendrogram" \T1/ptm/m/n/10 us-ing method

Underfull \hbox (badness 10000) in paragraph at lines 6524--6526
[]\T1/zi4/m/n/10 rev.dendrogram \T1/ptm/m/n/10 sim-ply re-turns the den-dro-gra
m \T1/zi4/m/n/10 x \T1/ptm/m/n/10 with re-versed nodes, see also
[1450] [1451] [1452] [1453] [1454]
Underfull \vbox (badness 3803) has occurred while \output is active [1455]
[1456] [1457] [1458] [1459] [1460] [1461] [1462]
Underfull \hbox (badness 10000) in paragraph at lines 7369--7372
[]\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][]\T
1/zi4/m/n/10 dist[][][]()\T1/ptm/m/n/10 , the
[1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473]
[1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484]
Underfull \vbox (badness 10000) has occurred while \output is active [1485]
[1486] [1487] [1488] [1489]
Underfull \hbox (badness 2626) in paragraph at lines 9048--9051
[]\T1/ptm/m/n/10 Either \T1/zi4/m/n/10 "convolution" \T1/ptm/m/n/10 or \T1/zi4/
m/n/10 "recursive" \T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If
[1490] [1491]
Underfull \hbox (badness 2503) in paragraph at lines 9155--9159
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1492] [1493] [1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] [1502]
[1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511]
Underfull \hbox (badness 4518) in paragraph at lines 10469--10474
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1512] [1513] [1514] [1515] [1516]
Underfull \hbox (badness 2142) in paragraph at lines 10830--10833
[]\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p
tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1
0 dev \OMS/cmsy/m/n/10 ^^@

Underfull \hbox (badness 1253) in paragraph at lines 10849--10852
[]\T1/ptm/m/n/10 When \T1/zi4/m/n/10 trace \T1/ptm/m/n/10 is true, calls to [][
]\T1/zi4/m/n/10 cat[][][] \T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-
er-a-tion. Hence,
[1517]
Underfull \hbox (badness 1708) in paragraph at lines 10911--10915
[]\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter-
na-tives are:
[1518] [1519] [1520] [1521] [1522] [1523]
Underfull \hbox (badness 1694) in paragraph at lines 11307--11310
[]\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these 
de-fault to
[1524] [1525] [1526] [1527] [1528] [1529] [1530] [1531]pdfTeX warning (ext4): d
estination with the same identifier (name{Rfn.hat}) has been already used, dupl
icate ignored
<to be read again> 
                   \relax 
l.11791 \aliasA{hat}{influence.measures}{hat}
                                              [1532] [1533]
Underfull \hbox (badness 1484) in paragraph at lines 11926--11928
[]\T1/ptm/m/n/10 The func-tion \T1/zi4/m/n/10 hat() \T1/ptm/m/n/10 ex-ists main
ly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing
[1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543]
Underfull \hbox (badness 10000) in paragraph at lines 12519--12521
[]\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][]\T1/zi4/m/n/10 solve.defa
ult[][][] \T1/ptm/m/n/10 when \T1/zi4/m/n/10 SSinit =
[1544] [1545] [1546] [1547] [1548] [1549]
Underfull \hbox (badness 2894) in paragraph at lines 12855--12859
[]\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f
ault method
[1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] [1558] [1559] [1560]
[1561]
Underfull \hbox (badness 4518) in paragraph at lines 13605--13610
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1562] [1563] [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571]
Underfull \hbox (badness 4518) in paragraph at lines 14257--14262
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1572] [1573]
Underfull \hbox (badness 8151) in paragraph at lines 14395--14399
[]\T1/ptm/m/n/10 Only for the (de-fault) case \T1/zi4/m/n/10 (surface = "interp
olate",statistics =

Underfull \hbox (badness 1199) in paragraph at lines 14402--14404
[]\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on
ly if \T1/zi4/m/n/10 family \T1/ptm/m/n/10 is
[1574] [1575] [1576] [1577] [1578] [1579] [1580] [1581] [1582] [1583] [1584]
[1585] [1586] [1587] [1588] [1589] [1590] [1591]
Underfull \hbox (badness 2503) in paragraph at lines 15473--15477
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599]
Underfull \hbox (badness 4621) in paragraph at lines 15985--15991
[]\T1/zi4/m/n/10 model.offset \T1/ptm/m/n/10 and \T1/zi4/m/n/10 model.response 
\T1/ptm/m/n/10 are equiv-a-lent to \T1/zi4/m/n/10 model.extract(,"offset") \T1/
ptm/m/n/10 and
[1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610]
[1611] [1612] [1613] [1614] [1615] [1616] [1617] [1618] [1619] [1620] [1621]
[1622] [1623] [1624] [1625] [1626] [1627]
Underfull \vbox (badness 10000) has occurred while \output is active [1628]
Underfull \vbox (badness 10000) has occurred while \output is active [1629]
[1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640]
[1641]
Underfull \hbox (badness 1377) in paragraph at lines 18588--18593
[]\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz
a-tion is per-formed on

Underfull \hbox (badness 1735) in paragraph at lines 18593--18596
[]\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma
-tion to the gra-di-ent, on
[1642]
Underfull \hbox (badness 2343) in paragraph at lines 18606--18610
[]\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i
t is un-able to re-duce

Underfull \hbox (badness 3471) in paragraph at lines 18606--18610
\T1/ptm/m/n/10 the value by a fac-tor of \T1/zi4/m/n/10 reltol * (abs(val) + re
ltol) \T1/ptm/m/n/10 at a step. De-faults to

Underfull \hbox (badness 2662) in paragraph at lines 18614--18618
[]\T1/ptm/m/n/10 The fre-quency of re-ports for the \T1/zi4/m/n/10 "BFGS"\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 "L-BFGS-B" \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "SANN" \
T1/ptm/m/n/10 meth-ods if
[1643] [1644] [1645]
Overfull \hbox (15.73795pt too wide) in paragraph at lines 18839--18839
 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b
ut NM may be ok and "unavoidable",[] 

Overfull \hbox (3.75941pt too wide) in paragraph at lines 18842--18842
 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list(
warn.1d.NelderMead = FALSE)))[] 

Underfull \vbox (badness 10000) has occurred while \output is active [1646]
[1647] [1648] [1649] [1650] [1651] [1652]
Underfull \hbox (badness 1337) in paragraph at lines 19264--19267
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661]
Underfull \hbox (badness 3049) in paragraph at lines 19760--19764
[]\T1/ptm/m/n/10 In the Cook's dis-tance vs leverage/(1-leverage) plot, con-tou
rs of stan-dard-ized resid-u-als
[1662] [1663] [1664] [1665]
Underfull \hbox (badness 1194) in paragraph at lines 20018--20021
[]\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting
 of the con-fi-dence
[1666] [1667] [1668] [1669] [1670] [1671] [1672]
Underfull \hbox (badness 2503) in paragraph at lines 20397--20400
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3919) in paragraph at lines 20424--20426
[]\T1/ptm/m/n/10 the char-ac-ter string \T1/zi4/m/n/10 "Exact Poisson test" \T1
/ptm/m/n/10 or \T1/zi4/m/n/10 "Comparison of Poisson
[1673] [1674] [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683]
[1684] [1685] [1686] [1687] [1688] [1689] [1690]
Underfull \hbox (badness 10000) in paragraph at lines 21501--21507
[]\T1/ptm/m/n/10 For time-series pre-dic-tion, [][]\T1/zi4/m/n/10 predict.ar[][
][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 predict.Arima[][][]\T1/ptm/m/n/10 , [][]
\T1/zi4/m/n/10 predict.arima0[][][]\T1/ptm/m/n/10 ,
[1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701]
[1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712]
[1713]
Underfull \hbox (badness 1337) in paragraph at lines 22855--22861
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721]
Overfull \hbox (27.74408pt too wide) in paragraph at lines 23420--23420
 []  \T1/zi4/m/n/9 t(vapply(1:9, function(typ) quantile(x, prob=prob, type = ty
p, ...), quantile(x, prob, type=1)))[] 
[1722] [1723] [1724] [1725] [1726]
Underfull \hbox (badness 10000) in paragraph at lines 23671--23674
[]\T1/ptm/m/n/10 Optional vec-tor with clus-ter mem-ber-ships as re-turned by

Underfull \hbox (badness 4205) in paragraph at lines 23671--23674
\T1/zi4/m/n/10 cutree(hclust.obj,k = k)\T1/ptm/m/n/10 , can be spec-i-fied for 
ef-fi-ciency if al-ready
[1727] [1728] [1729] [1730] [1731] [1732] [1733] [1734] [1735]
Underfull \hbox (badness 1824) in paragraph at lines 24257--24263
[]\T1/ptm/m/n/10 Here, all the NAs in \T1/zi4/m/n/10 x \T1/ptm/m/n/10 are first
 re-placed by al-ter-

Underfull \hbox (badness 1033) in paragraph at lines 24257--24263
\T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 
where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/
m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where
[1736]
Underfull \hbox (badness 10000) in paragraph at lines 24278--24281
[]\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult \T1/zi4/m/n/10 y = run
med(x,k) \T1/ptm/m/n/10 sim-ply has \T1/zi4/m/n/10 y[j] =

Underfull \hbox (badness 3690) in paragraph at lines 24347--24351
[][][]\T1/zi4/m/n/10 smoothEnds[][][] \T1/ptm/m/n/10 which im-ple-ments Tukey's
 end point rule and is called by de-fault from
[1737]
Underfull \vbox (badness 3803) has occurred while \output is active [1738]
[1739] [1740] [1741] [1742] [1743] [1744] [1745]
Underfull \hbox (badness 2165) in paragraph at lines 24856--24861
[]\T1/ptm/m/n/10 Each of the fol-low-ing are \T1/zi4/m/n/10 "selfStart" \T1/ptm
/m/n/10 mod-els (with ex-am-ples) [][]\T1/zi4/m/n/10 SSasymp[][][]\T1/ptm/m/n/1
0 , [][]\T1/zi4/m/n/10 SSasympOff[][][]\T1/ptm/m/n/10 ,
[1746] [1747] [1748] [1749]
Underfull \hbox (badness 1867) in paragraph at lines 25061--25063
[]\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. 
Passed to

Underfull \hbox (badness 10000) in paragraph at lines 25074--25078
\T1/ptm/m/n/10 where \T1/zi4/m/n/10 NN <-[][]nobs[][][](object,use.fallback = u
se.fallback) \T1/ptm/m/n/10 and \T1/zi4/m/n/10 PP
[1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] [1760]
Underfull \vbox (badness 3803) has occurred while \output is active [1761]
[1762] [1763] [1764] [1765] [1766] [1767] [1768] [1769] [1770] [1771] [1772]
[1773]
Underfull \vbox (badness 10000) has occurred while \output is active [1774]
Underfull \hbox (badness 3514) in paragraph at lines 26634--26639
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1775] [1776] [1777] [1778]
Overfull \hbox (2.23795pt too wide) in paragraph at lines 26868--26868
 []       \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5]
 == frac(log(2), e^{phi[2]})}),[] 
[1779]
Underfull \hbox (badness 3514) in paragraph at lines 26904--26910
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1780] [1781] [1782] [1783]
Underfull \hbox (badness 3514) in paragraph at lines 27118--27123
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1784]
Underfull \hbox (badness 3514) in paragraph at lines 27205--27210
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1785]
Underfull \hbox (badness 3514) in paragraph at lines 27270--27275
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1786] [1787]
Underfull \hbox (badness 3514) in paragraph at lines 27364--27369
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1788] [1789]
Underfull \hbox (badness 6691) in paragraph at lines 27456--27461
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 x\T1/p
tm/m/n/10 . It is the value of the ex-pres-sion
[1790] [1791] [1792] [1793] [1794] [1795] [1796] [1797]
Underfull \hbox (badness 4024) in paragraph at lines 27984--27987
[]\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion
, which
[1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807]
Underfull \hbox (badness 5431) in paragraph at lines 28590--28592
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1808] [1809] [1810] [1811]
Underfull \hbox (badness 5431) in paragraph at lines 28800--28803
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1812] [1813] [1814] [1815] [1816]
Underfull \hbox (badness 1337) in paragraph at lines 29114--29118
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1817] [1818] [1819] [1820] [1821]
Underfull \hbox (badness 1616) in paragraph at lines 29416--29419
[]\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial
 resid-u-als, when
[1822] [1823] [1824] [1825] [1826] [1827] [1828] [1829] [1830] [1831] [1832]
[1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840]
Underfull \hbox (badness 3557) in paragraph at lines 30546--30550
[]\T1/ptm/m/n/10 Setting \T1/zi4/m/n/10 extendInt \T1/ptm/m/n/10 to a non-\T1/z
i4/m/n/10 "no" \T1/ptm/m/n/10 string, means search-ing for the cor-rect \T1/zi4
/m/n/10 interval =
[1841] [1842] [1843]
Underfull \vbox (badness 10000) has occurred while \output is active [1844]
[1845] [1846]
Underfull \hbox (badness 1337) in paragraph at lines 30910--30914
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] [1855]
Underfull \hbox (badness 1337) in paragraph at lines 31437--31441
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1856] [1857] [1858] [1859] [1860] [1861] [1862] [1863] [1864] [1865])
(./stats4-pkg.tex [1866]
Chapter 11.
[1867] [1868] [1869] [1870] [1871] [1872]pdfTeX warning (ext4): destination wit
h the same identifier (name{Rfn.show.Rdash.methods}) has been already used, dup
licate ignored
<to be read again> 
                   \relax 
l.407 ...Package \pkg{stats4}}{show.Rdash.methods}
                                                   [1873] [1874] [1875])
(./tcltk-pkg.tex [1876]
Chapter 12.
[1877] [1878] [1879] [1880] [1881] [1882] [1883]
Underfull \vbox (badness 10000) has occurred while \output is active [1884]
Underfull \vbox (badness 10000) has occurred while \output is active [1885]
Underfull \hbox (badness 1546) in paragraph at lines 664--671
[]\T1/zi4/m/n/10 tcl \T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-ing
 any Tk or Tcl com-mand by sim-ply run-ning
[1886] [1887] [1888] [1889] [1890] [1891] [1892] [1893] [1894] [1895] [1896]
[1897]) (./tools-pkg.tex [1898]
Chapter 13.
[1899]

LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined
(Font)              using `T1/zi4/m/n' instead on input line 72.

[1900]
Underfull \hbox (badness 3039) in paragraph at lines 164--167
[]\T1/zi4/m/n/10 assertWarning() \T1/ptm/m/n/10 as-serts that a warn-ing will b
e sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas
[1901] [1902]
Underfull \hbox (badness 1308) in paragraph at lines 285--298
[]\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t
o ren-der each of the 12 types

Underfull \hbox (badness 4967) in paragraph at lines 285--298
\T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][]\T1/zi4/m/n/10 bibe
ntry[][][] \T1/ptm/m/n/10 as well as sev-eral other rou-tines de-

Underfull \hbox (badness 10000) in paragraph at lines 285--298
\T1/zi4/m/n/10 formatIncollection\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatInProcee
dings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatManual\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 formatMastersthesis\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 285--298
\T1/zi4/m/n/10 formatMisc\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatPhdthesis\T1/ptm
/m/n/10 , \T1/zi4/m/n/10 formatProceedings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 forma
tTechreport \T1/ptm/m/n/10 and
[1903] [1904]
Underfull \hbox (badness 3039) in paragraph at lines 389--391
[]\T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gine 
to use. Over-rides any
[1905] [1906] [1907] [1908] [1909] [1910] [1911] [1912] [1913] [1914] [1915]
[1916] [1917]
Underfull \hbox (badness 4441) in paragraph at lines 1139--1149
\T1/ptm/m/n/10 giv-ing the repos-i-to-ries to use for lo-cat-ing re-verse de-pe
n-den-cies (de-

Underfull \hbox (badness 1014) in paragraph at lines 1163--1165
[]\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v
erse de-pen-den-cies

Underfull \hbox (badness 7238) in paragraph at lines 1169--1171
[]\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a 
pre-vi-ous
[1918]
Underfull \hbox (badness 10000) in paragraph at lines 1206--1209
[]\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing


Overfull \hbox (15.52087pt too wide) in paragraph at lines 1206--1209
\T1/zi4/m/n/10 summarize_check_packages_in_dir_results \T1/ptm/m/n/10 and \T1/z
i4/m/n/10 summarize_check_packages_in_dir_timings\T1/ptm/m/n/10 ,
[1919] [1920] [1921] [1922] [1923]
Underfull \hbox (badness 2293) in paragraph at lines 1558--1560
[]\T1/zi4/m/n/10 CRAN_memtest_notes() \T1/ptm/m/n/10 is now dep-re-cated, with 
its func-tion-al-ity in-te-grated into that of
[1924] [1925] [1926]
Underfull \hbox (badness 7981) in paragraph at lines 1696--1701
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
 sub-set of

Underfull \hbox (badness 1082) in paragraph at lines 1703--1705
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br
ary trees, or \T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 for all known trees (see
[1927] [1928] [1929]pdfTeX warning (ext4): destination with the same identifier
 (name{Rfn.R.Rul.GSCMD}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.1900 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD}
                                                   [1930] [1931] [1932]
[1933] [1934] [1935]
Overfull \hbox (17.27782pt too wide) in paragraph at lines 2202--2202
 []\T1/zi4/m/n/9 writeLines(paste0("\\newcommand{\\logo}{\\if{html}{\\figure{Rl
ogo.svg}{options: width=100}",[] 
[1936] [1937] [1938]
Underfull \hbox (badness 7981) in paragraph at lines 2371--2377
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
 sub-set of
[1939] [1940] [1941] [1942] [1943] [1944] [1945]

LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 2846.


LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 2847.


LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 2847.

[1946] [1947] [1948] [1949] [1950]
Underfull \hbox (badness 1424) in paragraph at lines 3128--3130
[]\T1/zi4/m/it/10 NULL \T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec-t
or of links, as re-turned by
[1951] [1952] [1953] [1954] [1955] [1956] [1957] [1958] [1959] [1960] [1961]
Underfull \hbox (badness 10000) in paragraph at lines 3832--3834
[]\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run
,
[1962] [1963]
Underfull \hbox (badness 10000) in paragraph at lines 3971--3974
[]\T1/ptm/m/n/10 Where sup-ported (\T1/zi4/m/it/10 texi2dvi \T1/ptm/m/n/10 5.0 
and later; \T1/zi4/m/it/10 texify.exe \T1/ptm/m/n/10 from MiK-TeX), op-tion
[1964] [1965]
Underfull \hbox (badness 1137) in paragraph at lines 4073--4075
[]\T1/ptm/m/n/10 a ma-trix spec-i-fy-ing all pack-ages in-stalled on the lo-cal
 sys-tem, as from
[1966] [1967] [1968] [1969] [1970]
Underfull \hbox (badness 1796) in paragraph at lines 4381--4386
[]\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over \T
1/zi4/m/it/10 write_PACKAGES \T1/ptm/m/n/10 in the \T1/zi4/m/it/10 type ==
[1971]
Underfull \hbox (badness 1838) in paragraph at lines 4455--4461
[]\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p
o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists.
 The

Underfull \hbox (badness 10000) in paragraph at lines 4455--4461
\T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in 
the pack-age are ex-am-ined to cre-ate a file
[1972] [1973] [1974]
Underfull \hbox (badness 2197) in paragraph at lines 4671--4681
[]\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][]\T1/zi4
/m/it/10 available.packages[][][]\T1/ptm/m/n/10 :
[1975]
Underfull \hbox (badness 1571) in paragraph at lines 4734--4738
[]\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down-
load speed and time spent by
[1976] [1977] [1978]) (./utils-pkg.tex
Chapter 14.
[1979]
Underfull \hbox (badness 2556) in paragraph at lines 47--52
[]\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `\T
1/zi4/m/it/10 insertions\T1/ptm/m/n/10 ',
[1980] [1981] [1982] [1983] [1984]
Underfull \hbox (badness 10000) in paragraph at lines 376--381
\T1/zi4/m/it/10 c("vertical","horizontal","cascade","minimize","restore") \T1/p
tm/m/n/10 with
[1985] [1986] [1987] [1988] [1989]
Underfull \hbox (badness 10000) in paragraph at lines 717--723
[]\T1/ptm/m/n/10 Functions \T1/zi4/m/it/10 aspell_package_Rd_files\T1/ptm/m/n/1
0 , \T1/zi4/m/it/10 aspell_package_vignettes\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3343) in paragraph at lines 717--723
\T1/zi4/m/it/10 aspell_package_R_files \T1/ptm/m/n/10 and \T1/zi4/m/it/10 aspel
l_package_C_files \T1/ptm/m/n/10 per-form spell check-ing on the
[1990] [1991]
Underfull \hbox (badness 5847) in paragraph at lines 850--856
[]\T1/ptm/m/n/10 Argument \T1/zi4/m/it/10 filters \T1/ptm/m/n/10 can be used to
 se-lect which of the pack-ages on the repos-i-to-

Underfull \hbox (badness 4229) in paragraph at lines 850--856
\T1/ptm/m/n/10 ries are re-ported. It is called with its de-fault value (\T1/zi
4/m/it/10 NULL\T1/ptm/m/n/10 ) by func-tions such as
[1992]
Underfull \hbox (badness 3861) in paragraph at lines 918--923
[]\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields \T1/zi4/m/it/10 "O
S_type"\T1/ptm/m/n/10 , \T1/zi4/m/it/10 "License"\T1/ptm/m/n/10 , \T1/zi4/m/it/
10 "License_is_FOSS"\T1/ptm/m/n/10 ,
[1993] [1994]
Underfull \hbox (badness 3323) in paragraph at lines 1089--1097
[]\T1/ptm/m/n/10 (\T1/ptm/m/it/10 deprecated\T1/ptm/m/n/10 , use \T1/zi4/m/it/1
0 bibtex = T|F \T1/ptm/m/n/10 in-stead!) a num-ber, say $\OML/cmm/m/it/10 m$\T1
/ptm/m/n/10 , in-di-cat-

Underfull \hbox (badness 2961) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 ing that the bib-tex code should be given in ad-di-tion to the f
or-mat-

Underfull \hbox (badness 3919) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 ted tex \T1/ptm/m/it/10 when \T1/ptm/m/n/10 there are not more t
han $\OML/cmm/m/it/10 m$ \T1/ptm/m/n/10 en-tries. The de-fault is

Underfull \hbox (badness 3735) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 taken as [][]\T1/zi4/m/it/10 getOption[][][]("citation.bibtex.ma
x",1) \T1/ptm/m/n/10 which is \T1/zi4/m/it/10 1 \T1/ptm/m/n/10 typ-i-cally.

Underfull \hbox (badness 1817) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 For ex-am-ple, to see no bib-tex at all, you can change the de-f
ault by
[1995]
Underfull \hbox (badness 10000) in paragraph at lines 1101--1103
[]\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing
[1996] [1997]
Underfull \vbox (badness 3803) has occurred while \output is active [1998]
[1999] [2000] [2001] [2002]
Underfull \hbox (badness 1371) in paragraph at lines 1606--1608
[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/it/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/it/10 ccaddress \T1/ptm/m/n/10 to pass to
[2003]

LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 1676.

[2004] [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012]
Underfull \hbox (badness 2057) in paragraph at lines 2215--2217
[]\T1/ptm/m/n/10 None for \T1/zi4/m/it/10 chooseCRANmirror()\T1/ptm/m/n/10 , th
is func-tion is in-voked for its side ef-fect of up-dat-ing
[2013] [2014] [2015] [2016] [2017] [2018]pdfTeX warning (ext4): destination wit
h the same identifier (name{Rfn.clipboard}) has been already used, duplicate ig
nored
<to be read again> 
                   \relax 
l.2566 ... the Clipboard in MS Windows}{clipboard}
                                                   [2019] [2020]
Underfull \hbox (badness 1748) in paragraph at lines 2733--2736
[]\T1/ptm/m/n/10 A [][]\T1/zi4/m/it/10 list[][][] \T1/ptm/m/n/10 or [][]\T1/zi4
/m/it/10 array[][][]\T1/ptm/m/n/10 , see the \T1/zi4/m/it/10 simplify \T1/ptm/m
/n/10 ar-gu-ment above. In the lat-ter case, the iden-tity
[2021] [2022] [2023] [2024] [2025] [2026] [2027]
Underfull \hbox (badness 5388) in paragraph at lines 3142--3146
[]\T1/ptm/m/n/10 files end-ing `\T1/zi4/m/it/10 .tab\T1/ptm/m/n/10 ', `\T1/zi4/
m/it/10 .txt\T1/ptm/m/n/10 ' or `\T1/zi4/m/it/10 .TXT\T1/ptm/m/n/10 ' are read 
us-ing [][]\T1/zi4/m/it/10 read.table[][][](...,header =

Underfull \hbox (badness 2285) in paragraph at lines 3147--3150
[]\T1/ptm/m/n/10 files end-ing `\T1/zi4/m/it/10 .csv\T1/ptm/m/n/10 ' or `\T1/zi
4/m/it/10 .CSV\T1/ptm/m/n/10 ' are read us-ing [][]\T1/zi4/m/it/10 read.table[]
[][](...,header = TRUE,sep =
[2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] [2036] [2037] [2038]
Underfull \hbox (badness 1430) in paragraph at lines 3906--3914
[]\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by
 the \T1/zi4/m/it/10 quiet \T1/ptm/m/n/10 ar-gu-ment and the
[2039]
Underfull \hbox (badness 1231) in paragraph at lines 3983--3995
[]\T1/ptm/m/n/10 Usernames and pass-words can be set for HTTP proxy trans-fers 
via en-vi-ron-ment vari-able
[2040] [2041]
Underfull \hbox (badness 10000) in paragraph at lines 4141--4143
[]\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][]\T1/zi4/m/it/10 dow
nload.file[][][] \T1/ptm/m/n/10 and
[2042] [2043] [2044] [2045] [2046] [2047] [2048] [2049] [2050] [2051] [2052]
[2053]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.for
mat}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.4839 ...mat Unordered and Ordered Lists}{format}
                                                  pdfTeX warning (ext4): destin
ation with the same identifier (name{Rfn.format.1}) has been already used, dupl
icate ignored
<to be read again> 
                   \relax 
l.4839 ...mat Unordered and Ordered Lists}{format}
                                                   [2054] [2055] [2056]
[2057] [2058] [2059] [2060] [2061]
Underfull \hbox (badness 1622) in paragraph at lines 5358--5362
[]\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing
 to ex-ter-nal GUIs or to the
[2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071]

LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 5990.


Underfull \hbox (badness 1371) in paragraph at lines 5994--5996
[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/it/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/it/10 ccaddress \T1/ptm/m/n/10 to pass to
[2072]
Underfull \hbox (badness 1502) in paragraph at lines 6083--6088
[]\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words
'. `Key-

Underfull \hbox (badness 2103) in paragraph at lines 6083--6088
\T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are 
listed in file
[2073] [2074] [2075]
Underfull \hbox (badness 10000) in paragraph at lines 6256--6265
[]\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de
x,
[2076]
Underfull \hbox (badness 2150) in paragraph at lines 6320--6323
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion 
to search. See
[2077] [2078]
Underfull \hbox (badness 3118) in paragraph at lines 6458--6460
[]\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion `
Lock-ing' in the help for
[2079] [2080] [2081]
Underfull \hbox (badness 1325) in paragraph at lines 6630--6634
[]\T1/ptm/m/n/10 a ma-trix as re-turned by [][]\T1/zi4/m/it/10 available.packag
es[][][] \T1/ptm/m/n/10 list-ing pack-ages avail-able

Underfull \hbox (badness 4726) in paragraph at lines 6642--6648
\T1/ptm/m/n/10 used if \T1/zi4/m/it/10 repos = NULL\T1/ptm/m/n/10 . Can also be
 a char-ac-ter vec-tor, a sub-set of
[2082]
Underfull \hbox (badness 10000) in paragraph at lines 6714--6717
[]\T1/ptm/m/n/10 an op-tional char-ac-ter vec-tor of ad-di-tional op-tion(s) to
 be

Underfull \hbox (badness 10000) in paragraph at lines 6714--6717
\T1/ptm/m/n/10 passed to \T1/zi4/m/it/10 R CMD INSTALL \T1/ptm/m/n/10 for a sou
rce pack-age in-stall. E.g.,
[2083]
Underfull \hbox (badness 3219) in paragraph at lines 6790--6797
[]\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is \T1/zi4/m/it/
10 "both" \T1/ptm/m/n/10 which means `use bi-nary if avail-

Underfull \hbox (badness 5175) in paragraph at lines 6790--6797
\T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there
 are source pack-ages

Underfull \hbox (badness 1342) in paragraph at lines 6790--6797
\T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com
-piled is con-trolled by

Underfull \hbox (badness 1596) in paragraph at lines 6790--6797
[][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")\T1/
ptm/m/n/10 . \T1/zi4/m/it/10 type = "both" \T1/ptm/m/n/10 will be silently

Underfull \hbox (badness 2932) in paragraph at lines 6798--6801
[]\T1/ptm/m/n/10 Using pack-ages with \T1/zi4/m/it/10 type = "source" \T1/ptm/m
/n/10 al-ways works pro-vided the pack-age con-tains no
[2084]
Underfull \hbox (badness 10000) in paragraph at lines 6934--6939
[][][]\T1/zi4/m/it/10 update.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10
 available.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 download.packages
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 installed.packages[][][]\T1/ptm/m/n/
10 ,
[2085] [2086] [2087] [2088] [2089] [2090] [2091] [2092] [2093] [2094] [2095]
[2096] [2097] [2098] [2099] [2100] [2101] [2102] [2103] [2104] [2105] [2106]
[2107] [2108] [2109]
Underfull \hbox (badness 10000) in paragraph at lines 8434--8436
[]\T1/ptm/m/n/10 for \T1/zi4/m/it/10 asDateBuilt()\T1/ptm/m/n/10 , a [][]\T1/zi
4/m/it/10 character[][][] \T1/ptm/m/n/10 string as from

Underfull \hbox (badness 2310) in paragraph at lines 8456--8461
[]\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the
 given pack-age is found and can suc-cess-fully be read,
[2110] [2111] [2112] [2113] [2114] [2115] [2116] [2117]
Underfull \hbox (badness 1248) in paragraph at lines 8980--8984
[]\T1/zi4/m/it/10 R CMD build \T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/m/
n/10 source tar-balls. The name(s) of the pack-ages are taken from the
[2118]
Underfull \hbox (badness 1789) in paragraph at lines 9058--9060
[]\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for
 more dis-cus-sion of the
[2119] [2120] [2121] [2122] [2123] [2124] [2125] [2126] [2127] [2128] [2129]
[2130] [2131]
Underfull \hbox (badness 1097) in paragraph at lines 9895--9898
[]\T1/ptm/m/n/10 The name \T1/zi4/m/it/10 "clipboard" \T1/ptm/m/n/10 may also b
e used on Win-dows, in which case
[2132] [2133]
Underfull \hbox (badness 3000) in paragraph at lines 10031--10036
[][][]\T1/zi4/m/it/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/it/10 read.t
able[][][]\T1/ptm/m/n/10 ;
[2134] [2135] [2136] [2137] [2138] [2139] [2140] [2141] [2142]
Underfull \hbox (badness 2134) in paragraph at lines 10614--10619
[][][]\T1/zi4/m/it/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/it/10 write.
table[][][]\T1/ptm/m/n/10 ;

Underfull \hbox (badness 10000) in paragraph at lines 10670--10675
[]\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for


Underfull \hbox (badness 10000) in paragraph at lines 10670--10675
\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE\T1/ptm/m/n/10 , \T1/zi4/m/it/10 HKEY_CLASSES
_ROOT\T1/ptm/m/n/10 . \T1/zi4/m/it/10 HKEY_CURRENT_USER\T1/ptm/m/n/10 ,
[2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151]
Underfull \hbox (badness 2469) in paragraph at lines 11163--11167
[]\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia
, The Free En-cy-clo-pe-dia.

Underfull \hbox (badness 3428) in paragraph at lines 11163--11167
[][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title
 = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac-
[2152] [2153] [2154] [2155] [2156]
Underfull \hbox (badness 4060) in paragraph at lines 11494--11497
[]\T1/ptm/m/n/10 If `\T1/zi4/m/it/10 --default-packages\T1/ptm/m/n/10 ' is not 
used, then \T1/zi4/m/it/10 Rscript \T1/ptm/m/n/10 checks the en-vi-ron-ment var
i-able

Overfull \hbox (18.77168pt too wide) in paragraph at lines 11517--11517
 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr
aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] 
[2157] [2158] [2159] [2160]
Underfull \hbox (badness 2150) in paragraph at lines 11756--11758
[][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/
ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac
s / manual /
[2161] [2162] [2163] [2164]
Underfull \hbox (badness 10000) in paragraph at lines 11975--11979
[]\T1/ptm/m/n/10 The de-fault for \T1/zi4/m/it/10 stylepath \T1/ptm/m/n/10 is n
ow taken from the en-vi-ron-ment vari-able

Underfull \hbox (badness 10000) in paragraph at lines 12006--12012
[]\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y
ou can add a
[2165] [2166]
Underfull \hbox (badness 1009) in paragraph at lines 12200--12212
[]\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func-
tions can be ex-e-cuted. If
[2167]
Underfull \hbox (badness 4779) in paragraph at lines 12237--12239
[]\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure
s the R GUI (\T1/zi4/m/it/10 Rgui\T1/ptm/m/n/10 ) con-sole un-der MS Win-dows a
nd

Underfull \hbox (badness 1077) in paragraph at lines 12267--12274
\T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p
er-sonal' di-rec-tory, oth-er-wise to
[2168] [2169] [2170] [2171] [2172] [2173] [2174]
Underfull \hbox (badness 3780) in paragraph at lines 12668--12672
[]\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][]\T1
/zi4/m/it/10 options[][][]("BioC_mirror")\T1/ptm/m/n/10 , e.g. via

Underfull \hbox (badness 2635) in paragraph at lines 12684--12687
[]\T1/ptm/m/n/10 Repository `\T1/zi4/m/it/10 CRAN\T1/ptm/m/n/10 ' is treated sp
e-cially: the value is taken from the cur-rent set-ting of
[2175] [2176] [2177] [2178]
Underfull \hbox (badness 2302) in paragraph at lines 12889--12891
[]\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t
o the Win-dows API call
[2179] [2180] [2181] [2182]
Underfull \hbox (badness 10000) in paragraph at lines 13185--13190
[]\T1/ptm/m/n/10 logical; if \T1/zi4/m/it/10 TRUE \T1/ptm/m/n/10 (de-fault), []
[]\T1/zi4/m/it/10 deparse[][][](control = <S>) \T1/ptm/m/n/10 will not have

Underfull \hbox (badness 5970) in paragraph at lines 13194--13197
[]\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t
ive
[2183] [2184]
Underfull \vbox (badness 10000) has occurred while \output is active [2185]
[2186] [2187] [2188] [2189]
Underfull \hbox (badness 2932) in paragraph at lines 13614--13621
[]\T1/ptm/m/n/10 If \T1/zi4/m/it/10 syntax = NULL \T1/ptm/m/n/10 (the de-fault)
 then the avail-able syn-tax ob-jects are con-sulted in turn,

Underfull \hbox (badness 1688) in paragraph at lines 13614--13621
\T1/ptm/m/n/10 and se-lected if their \T1/zi4/m/it/10 extension \T1/ptm/m/n/10 
com-po-nent matches (as a reg-exp) the file name. Ob-
[2190] [2191] [2192] [2193] [2194]
Underfull \hbox (badness 6510) in paragraph at lines 13923--13927
[]\T1/ptm/m/n/10 When ar-gu-ment \T1/zi4/m/it/10 tar \T1/ptm/m/n/10 is set to t
he com-mand \T1/zi4/m/it/10 tar \T1/ptm/m/n/10 on ma-cOS, en-vi-ron-ment vari-a
ble

Underfull \hbox (badness 10000) in paragraph at lines 13930--13933
[][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ 
format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 http : / / pubs . opengroup .
 org /

Underfull \hbox (badness 2245) in paragraph at lines 13930--13933
\T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9
2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX
[2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204]
Underfull \hbox (badness 10000) in paragraph at lines 14594--14599
[]\T1/ptm/m/n/10 Arguments such as \T1/zi4/m/it/10 destdir \T1/ptm/m/n/10 and \
T1/zi4/m/it/10 dependencies \T1/ptm/m/n/10 to be passed to

Underfull \hbox (badness 3861) in paragraph at lines 14594--14599
[][]\T1/zi4/m/it/10 install.packages[][][] \T1/ptm/m/n/10 and \T1/zi4/m/it/10 i
gnore_repo_cache\T1/ptm/m/n/10 , \T1/zi4/m/it/10 max_repo_cache_age \T1/ptm/m/n
/10 and

Underfull \hbox (badness 1052) in paragraph at lines 14600--14602
[]\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and
 in-stall. See
[2205]
Underfull \hbox (badness 10000) in paragraph at lines 14659--14662
[][][]\T1/zi4/m/it/10 install.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/1
0 available.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 download.package
s[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 installed.packages[][][]\T1/ptm/m/n
/10 ,
[2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] [2214] [2215] [2216]
[2217]
Underfull \hbox (badness 10000) in paragraph at lines 15432--15434
[]\T1/ptm/m/n/10 To write a Unix-style file on Win-dows, use a bi-nary con-nec-
tion e.g. \T1/zi4/m/it/10 file =
[2218] [2219] [2220] [2221]) [2222] (./fullrefman.ind [2223] [2224] [2225]
[2226] [2227] [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236]
[2237] [2238] [2239] [2240] [2241] [2242] [2243] [2244] [2245] [2246] [2247]
[2248] [2249] [2250] [2251] [2252] [2253] [2254] [2255] [2256] [2257] [2258]
[2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] [2267] [2268] [2269]
[2270] [2271] [2272]
Overfull \hbox (33.3567pt too wide) in paragraph at lines 8871--8873
[]\T1/zi4/m/it/10 package_native_routine_registration_skeleton\T1/ptm/m/n/10 , 

[2273] [2274] [2275] [2276] [2277] [2278]
Overfull \hbox (20.8567pt too wide) in paragraph at lines 10190--10192
[]\T1/zi4/m/it/10 R_AVAILABLE_PACKAGES_CACHE_CONTROL_MAX_AGE 
[2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286]
Overfull \hbox (5.8567pt too wide) in paragraph at lines 11936--11938
[]\T1/zi4/m/it/10 summarize_check_packages_in_dir_depends 

Overfull \hbox (5.8567pt too wide) in paragraph at lines 11938--11940
[]\T1/zi4/m/it/10 summarize_check_packages_in_dir_results 

Overfull \hbox (5.8567pt too wide) in paragraph at lines 11940--11942
[]\T1/zi4/m/it/10 summarize_check_packages_in_dir_timings 
[2287] [2288] [2289] [2290] [2291] [2292] [2293] [2294] [2295])
(./fullrefman.aux)

Package rerunfilecheck Warning: File `fullrefman.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Font Warning: Some font shapes were not available, defaults substituted.

 )
(see the transcript file for additional information)pdfTeX warning (dest): name
{Rfn.write.matrix} has been referenced but does not exist, replaced by a fixed 
one

pdfTeX warning (dest): name{Rfn.lmList} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dgTMatrix} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.glht} has been referenced but does not exist, r
eplaced by a fixed one

pdfTeX warning (dest): name{Rfn.survreg} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.coxph} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.stepAIC} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rinvGauss} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.gamma.shape} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.profile.glm} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cov.mcd} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cov.mve} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.Insurance} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.sparse.model.matrix} has been referenced but do
es not exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.lqs} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.logLik.lme} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.logLik.gls} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.lmrob} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rlm} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.wilcox.Rul.test} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.loglm} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.nlsList} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.daisy} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.spearman.test} has been referenced but does not
 exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.pSpearman} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.pKendall} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.Kendall} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cor.fk} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dMatrix} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dgCMatrix} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.confint.nls} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.confint.glm} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.sammon} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.isoMDS} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.width.SJ} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.bcv} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.ucv} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.bandwidth.nrd} has been referenced but does not
 exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.agnes} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.diana} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.lme} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.ansari.Rul.test} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rpart} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.sparseMatrix} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.showDefault} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getGroupMembers} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.resetGeneric} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.linearizeMlist} has been referenced but does no
t exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getGeneric} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getMethodsForDispatch} has been referenced but 
does not exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.setDataPart} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getDataPart} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rBind} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cBind} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.possibleExtends} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.panel.identify} has been referenced but does no
t exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.trellis.focus} has been referenced but does not
 exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.mosaic} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.levelplot} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.contourplot} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.assoc} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dpih} has been referenced but does not exist, r
eplaced by a fixed one

pdfTeX warning (dest): name{Rfn.truehist} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.bkde2D} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.which.is.max} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getNamespace} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.asNamespace} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.formalArgs} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.isRematched} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.chron} has been referenced but does not exist, 
replaced by a fixed one

{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc} </tmp/texfonts/pk/l
jfour/jknappen/ec/tctt1000.600pk> </tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900
.600pk>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}{/
usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-t1-0.enc}</usr/shar
e/texlive/texmf-dist/fonts/type1/public/inconsolata/Inconsolata-zi4b.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/inconsolata/Inconsolata-zi4r.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cmextra/cmbsy7.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmbx10.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb></usr/share/tex
live/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/t
exmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/font
s/type1/public/amsfonts/cm/cmmib10.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmr5.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfo
nts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/c
msy10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy5.p
fb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy7.pfb></us
r/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/
fonts/type1/urw/times/utmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/ur
w/times/utmr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.
pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on fullrefman.pdf (2326 pages, 6266887 bytes).
Transcript written on fullrefman.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./fullrefman.tex
LaTeX2e <2020-02-02> patch level 2
L3 programming layer <2020-02-14>
(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls
Document Class: book 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))
(../../share/texmf/tex/latex/Rd.sty
(/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/bm.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/inconsolata/zi4.sty
`inconsolata-zi4' v1.12, 2019/05/17 Text macros for Inconsolata (msharpe)
(/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty
(/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex
(/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex
(/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex)))))
(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))

Package hyperref Warning: Option `hyperindex' has already been used,
(hyperref)                setting the option has no effect on input line 377.


Package hyperref Warning: Option `pagebackref' has already been used,
(hyperref)                setting the option has no effect on input line 377.

) (/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)))
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
Writing index file fullrefman.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
(./fullrefman.aux) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd)
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(./fullrefman.out) (./fullrefman.out)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (./version.tex)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}] (./fullrefman.toc
(/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd) [1] [2] [3]
[4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19]
[20] [21] [22] [23] [24] [25] [26] [27] [28] [29]) [30] (./base-pkg.tex
Chapter 1.
[1] [2]
Underfull \hbox (badness 6995) in paragraph at lines 141--149
[]\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber \T1/zi4/m/n/10 x \T1
/ptm/m/n/10 such that \T1/zi4/m/n/10 1 -x != 1\T1/ptm/m/n/10 . It

Underfull \hbox (badness 10000) in paragraph at lines 141--149
\T1/ptm/m/n/10 equals \T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits \T1/pt
m/m/n/10 if \T1/zi4/m/n/10 double.base

Underfull \hbox (badness 10000) in paragraph at lines 141--149
\T1/ptm/m/n/10 is 2 or \T1/zi4/m/n/10 double.rounding \T1/ptm/m/n/10 is 0; oth-
er-wise, it is \T1/zi4/m/n/10 (double.base

Underfull \hbox (badness 10000) in paragraph at lines 141--149
\T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2\T1/ptm/m/n/10 . Nor-mally \T1/zi4/m
/n/10 1.110223e-16\T1/ptm/m/n/10 . As

Underfull \hbox (badness 4995) in paragraph at lines 141--149
\T1/zi4/m/n/10 double.neg.ulp.digits \T1/ptm/m/n/10 is bounded be-low by \T1/zi
4/m/n/10 -(double.digits + 3)\T1/ptm/m/n/10 ,
[3] [4] [5]
Underfull \hbox (badness 1178) in paragraph at lines 297--301
[]\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][]\T1/zi4/m/n/
10 options[][][]("pkgType")\T1/ptm/m/n/10 . Val-ues
[6] [7] [8]
Underfull \hbox (badness 2556) in paragraph at lines 534--540
[]\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `\T
1/zi4/m/n/10 insertions\T1/ptm/m/n/10 ',
[9] [10] [11] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd)
[12] [13] [14] [15] [16] [17] [18]
Underfull \hbox (badness 2671) in paragraph at lines 1178--1181
[]\T1/ptm/m/n/10 If the calls to \T1/zi4/m/n/10 FUN \T1/ptm/m/n/10 re-turn vec-
tors of dif-fer-ent lengths, \T1/zi4/m/n/10 apply \T1/ptm/m/n/10 re-turns a lis
t of length
[19] [20] [21] (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd)
(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [22] [23] [24]
[25] [26] [27] [28] [29] [30]
Overfull \hbox (26.27782pt too wide) in paragraph at lines 1966--1966
 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen
t-date-and-times-in-MATLAB.html)[] 
[31] [32] [33] [34] [35] [36] [37]
Underfull \hbox (badness 10000) in paragraph at lines 2402--2404
[]\T1/ptm/m/n/10 The val-ues of the splits can also be ob-tained (less ef-fi-ci
ently) by

Underfull \hbox (badness 10000) in paragraph at lines 2405--2410
[][][]\T1/zi4/m/n/10 apply[][][] \T1/ptm/m/n/10 al-ways sim-pli-fies com-mon le
ngth re-sults, so at-tempt-ing to split via

Underfull \hbox (badness 1102) in paragraph at lines 2405--2410
\T1/zi4/m/n/10 apply(x,MARGIN,identity) \T1/ptm/m/n/10 does not work (as it sim
-ply gives \T1/zi4/m/n/10 x\T1/ptm/m/n/10 ). By chain-ing \T1/zi4/m/n/10 asplit

[38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52]
[53] [54] [55] [56] [57] [58] [59]
Underfull \hbox (badness 10000) in paragraph at lines 3784--3786
[]\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim
-ited by set-ting
[60] [61] [62]
Overfull \hbox (6.42029pt too wide) in paragraph at lines 4025--4025
 []   \T1/zi4/m/n/10 c.factor <- function(..., recursive=TRUE) unlist(list(...)
, recursive=recursive) 
[63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77]
[78]
Underfull \hbox (badness 2521) in paragraph at lines 5046--5048
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c
har-ac-ter by
[79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93]
[94] [95] [96]
Overfull \hbox (5.27168pt too wide) in paragraph at lines 6202--6202
 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex
_)), is.na(Im(NA_complex_)))[] 
[97] [98] [99] [100] [101] [102]
Overfull \hbox (46.35893pt too wide) in paragraph at lines 6611--6613
[]\T1/ptm/m/n/10 character string, par-tially matched to \T1/zi4/m/n/10 c("defa
ult","internal","wininet","libcurl")\T1/ptm/m/n/10 : 
[103] [104]
Underfull \hbox (badness 10000) in paragraph at lines 6759--6762
[]\T1/ptm/m/n/10 A note on `\T1/zi4/m/n/10 file://\T1/ptm/m/n/10 ' URLs. The mo
st gen-eral form (from RFC1738) is
[105] [106]
Underfull \hbox (badness 6063) in paragraph at lines 6941--6947
[]\T1/ptm/m/n/10 As from \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.0.0 the en-cod-ing \
T1/zi4/m/n/10 "UTF-8-BOM" \T1/ptm/m/n/10 is ac-cepted for read-ing and will re-


Underfull \hbox (badness 2343) in paragraph at lines 6941--6947
\T1/ptm/m/n/10 move a Byte Or-der Mark if present (which it of-ten is for files
 and web-pages gen-er-

Underfull \hbox (badness 1708) in paragraph at lines 6941--6947
\T1/ptm/m/n/10 ated by Mi-crosoft ap-pli-ca-tions). If a BOM is re-quired (it i
s not rec-om-mended) when

Underfull \hbox (badness 1831) in paragraph at lines 6941--6947
\T1/ptm/m/n/10 writ-ing it should be writ-ten ex-plic-itly, e.g. by \T1/zi4/m/n
/10 writeChar("\ufeff",con,eos = NULL) \T1/ptm/m/n/10 or
[107]
Underfull \hbox (badness 3568) in paragraph at lines 7003--7010
\T1/zi4/m/n/10 txt$[][]\T1/ptm/m/n/10 ), which can also be spec-i-fied as \T1/z
i4/m/n/10 "X11_primary" \T1/ptm/m/n/10 and the sec-ondary se-lec-tion as
[108] [109]
Underfull \vbox (badness 3803) has occurred while \output is active [110]
Underfull \vbox (badness 10000) has occurred while \output is active [111]
[112]
Underfull \hbox (badness 1077) in paragraph at lines 7330--7336
[]\T1/ptm/m/n/10 A length-one log-i-cal vec-tor that is not \T1/zi4/m/n/10 NA\T
1/ptm/m/n/10 . Con-di-tions of length greater

Underfull \hbox (badness 1231) in paragraph at lines 7330--7336
\T1/ptm/m/n/10 than one are cur-rently ac-cepted with a warn-ing, but only the 
first el-e-
[113] [114] [115] [116] [117] [118]
Underfull \hbox (badness 2096) in paragraph at lines 7671--7675
\T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https
 : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$
[][]\T1/ptm/m/n/10 .
[119] [120]
Underfull \hbox (badness 2351) in paragraph at lines 7789--7792
[][][]\T1/zi4/m/n/10 split[][][] \T1/ptm/m/n/10 for split-ting a vari-able ac-c
ord-ing to a group fac-tor; [][]\T1/zi4/m/n/10 factor[][][]\T1/ptm/m/n/10 , [][
]\T1/zi4/m/n/10 tabulate[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 table[][][]\T
1/ptm/m/n/10 ,
[121] [122] [123] [124] [125]
Underfull \hbox (badness 4479) in paragraph at lines 8115--8125
[][][]\T1/zi4/m/n/10 I[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 plot.data.frame
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 print.data.frame[][][]\T1/ptm/m/n/10 
, [][]\T1/zi4/m/n/10 row.names[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 names[]
[][] \T1/ptm/m/n/10 (for the col-umn names),
[126] [127] [128] [129] [130] [131]
Underfull \hbox (badness 1629) in paragraph at lines 8562--8574
[]\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a
re ig-nored, and real times

Underfull \hbox (badness 1609) in paragraph at lines 8562--8574
\T1/ptm/m/n/10 there is a prob-lem in the POSIX/C99 stan-dard with \T1/zi4/m/n/
10 "1969-12-31 23:59:59 UTC"\T1/ptm/m/n/10 , which

Underfull \hbox (badness 2426) in paragraph at lines 8562--8574
\T1/ptm/m/n/10 is \T1/zi4/m/n/10 -1 \T1/ptm/m/n/10 in cal-en-dar time and that 
value is on those OSes also used as an er-ror code.
[132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142]
Underfull \hbox (badness 1178) in paragraph at lines 9298--9302
[]\T1/ptm/m/n/10 If true, [][]\T1/zi4/m/n/10 list[][][]\T1/ptm/m/n/10 s and ato
mic vec-tors with non-[][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 names (see [][
]\T1/zi4/m/n/10 names[][][]\T1/ptm/m/n/10 ) are de-
[143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154]
[155] [156] [157] [158] [159] [160]
Underfull \hbox (badness 1735) in paragraph at lines 10446--10450
\T1/zi4/m/n/10 754-[]2008$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/n/10 https : / / 
en . wikipedia . org / wiki / Double _ precision$[][]\T1/ptm/m/n/10 , [][]$\T1/
zi4/m/n/10 https : / / en . wikipedia .
[161] [162] [163] [164] [165] [166] [167]
Underfull \hbox (badness 6396) in paragraph at lines 10885--10893
[]\T1/ptm/m/n/10 For the de-fault meth-ods, and when-ever there are equiv-a-len
t method def-i-ni-tions for

Underfull \hbox (badness 1946) in paragraph at lines 10885--10893
\T1/zi4/m/n/10 duplicated \T1/ptm/m/n/10 and \T1/zi4/m/n/10 anyDuplicated\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 anyDuplicated(x,...) \T1/ptm/m/n/10 is a ``gen-er-al-
ized'' short-cut for
[168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179]
[180] [181] [182] [183]
Underfull \hbox (badness 4569) in paragraph at lines 12002--12006
[]\T1/ptm/m/n/10 When eval-u-at-ing ex-pres-sions in a data frame that has been
 passed as an ar-gu-ment

Underfull \hbox (badness 2401) in paragraph at lines 12002--12006
\T1/ptm/m/n/10 to a func-tion, the rel-e-vant en-clo-sure is of-ten the caller'
s en-vi-ron-ment, i.e., one needs
[184]
Underfull \vbox (badness 10000) has occurred while \output is active [185]
[186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197]
[198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208]
Underfull \hbox (badness 2253) in paragraph at lines 13665--13667
[]\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is
 done: see
[209] [210]
Underfull \hbox (badness 1565) in paragraph at lines 13738--13742
[][][]\T1/zi4/m/n/10 Sys.readlink[][][] \T1/ptm/m/n/10 to find out about sym-bo
lic links, [][]\T1/zi4/m/n/10 files[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 fi
le.access[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files[][][]\T1/ptm/m/n/
10 , and

Underfull \hbox (badness 4927) in paragraph at lines 13782--13784
[]\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as \T1/zi4/m
/n/10 PATH \T1/ptm/m/n/10 and \T1/zi4/m/n/10 R_LIBS \T1/ptm/m/n/10 with \T1/zi4
/m/n/10 fsep =
[211] [212]
Underfull \hbox (badness 3148) in paragraph at lines 13875--13880
[][][]\T1/zi4/m/n/10 files[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files[
][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 help[][][]\T1/ptm/m/n/10 ; [][]\T1/zi4
/m/n/10 RShowDoc[][][] \T1/ptm/m/n/10 call \T1/zi4/m/n/10 file.show() \T1/ptm/m
/n/10 for \T1/zi4/m/n/10 type = "text"\T1/ptm/m/n/10 . Con-sider
[213]
Underfull \hbox (badness 1466) in paragraph at lines 13922--13925
[]\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For \T1/
zi4/m/n/10 file.copy \T1/ptm/m/n/10 and
[214]
Underfull \hbox (badness 10000) in paragraph at lines 14049--14053
[][][]\T1/zi4/m/n/10 file.info[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.ac
cess[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.path[][][]\T1/ptm/m/n/10 , [
][]\T1/zi4/m/n/10 file.show[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 unlink[][][]\T1/ptm/m/n/10 , [][]\T1/
zi4/m/n/10 basename[][][]\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 14060--14063
[][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][
] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik
i /
[215] [216] [217] [218] [219]
Underfull \hbox (badness 3965) in paragraph at lines 14352--14356
[]\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr
i-bu-tion func-tion, and in-deed,
[220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230] [231]
Underfull \hbox (badness 4429) in paragraph at lines 15128--15131
[]\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][]
\T1/zi4/m/n/10 complex[][][] \T1/ptm/m/n/10 only for
[232] [233]
Underfull \hbox (badness 10000) in paragraph at lines 15234--15236
[]\T1/ptm/m/n/10 This works via \T1/zi4/m/n/10 prettyNum()\T1/ptm/m/n/10 , whic
h calls

Underfull \hbox (badness 1215) in paragraph at lines 15234--15236
\T1/zi4/m/n/10 .format.zeros(*,replace=replace.zero) \T1/ptm/m/n/10 three times
 in this case, see

Underfull \hbox (badness 10000) in paragraph at lines 15256--15261
[]\T1/ptm/m/n/10 For num-bers, \T1/zi4/m/n/10 formatC() \T1/ptm/m/n/10 calls \T
1/zi4/m/n/10 prettyNum() \T1/ptm/m/n/10 when needed which it-self calls

Underfull \hbox (badness 1558) in paragraph at lines 15256--15261
\T1/zi4/m/n/10 .format.zeros(*,replace=replace.zero)\T1/ptm/m/n/10 . (\T1/ptm/m
/it/10 ``when needed''\T1/ptm/m/n/10 : when \T1/zi4/m/n/10 zero.print \T1/ptm/m
/n/10 is not

Underfull \hbox (badness 10000) in paragraph at lines 15268--15272
[]\T1/zi4/m/n/10 formatC \T1/ptm/m/n/10 does not nec-es-sar-ily align the num-b
ers on the dec-i-mal point, so

Underfull \hbox (badness 2426) in paragraph at lines 15268--15272
\T1/zi4/m/n/10 formatC(c(6.11,13.1),digits = 2,format = "fg") \T1/ptm/m/n/10 gi
ves \T1/zi4/m/n/10 c("6.1"," 13")\T1/ptm/m/n/10 . If you want
[234]
Underfull \hbox (badness 2035) in paragraph at lines 15307--15311
[]\T1/ptm/m/n/10 The de-fault for \T1/zi4/m/n/10 decimal.mark \T1/ptm/m/n/10 in
 \T1/zi4/m/n/10 formatC() \T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/pt
m/m/n/10 3.2.0: for use within
[235]
Underfull \vbox (badness 10000) has occurred while \output is active [236]
[237] [238] [239] [240] [241] [242] [243]
Underfull \hbox (badness 2452) in paragraph at lines 15906--15910
[]\T1/zi4/m/n/10 gctorture2 \T1/ptm/m/n/10 can also be in-voked via en-vi-ron-m
ent vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses-

Underfull \hbox (badness 1147) in paragraph at lines 15906--15910
\T1/ptm/m/n/10 sion. \T1/zi4/m/n/10 R_GCTORTURE \T1/ptm/m/n/10 cor-re-sponds to
 the \T1/zi4/m/n/10 step \T1/ptm/m/n/10 ar-gu-ment, \T1/zi4/m/n/10 R_GCTORTURE_
WAIT \T1/ptm/m/n/10 to \T1/zi4/m/n/10 wait\T1/ptm/m/n/10 , and
[244] [245] [246]
Underfull \hbox (badness 1092) in paragraph at lines 16079--16084
[][]\T1/zi4/m/n/10 library.dynam[][][]\T1/ptm/m/n/10 , or can be found af-ter t
he DLL has been loaded us-ing
[247] [248] [249]
Underfull \hbox (badness 6741) in paragraph at lines 16329--16333
\T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing \
T1/zi4/m/n/10 CRoutine\T1/ptm/m/n/10 , \T1/zi4/m/n/10 CallRoutine\T1/ptm/m/n/10
 ,
[250] [251] [252] [253] [254] [255] [256] [257] [258]
Underfull \vbox (badness 3803) has occurred while \output is active [259]
Underfull \vbox (badness 10000) has occurred while \output is active [260]
[261] [262] [263] [264] [265] [266] [267] [268] [269]
Underfull \hbox (badness 1478) in paragraph at lines 17622--17625
[]\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha
r-ac-ter vec-tor
[270] [271] [272] [273]
Underfull \hbox (badness 10000) in paragraph at lines 17877--17879
[]\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 http : / / www
 . unicode . org / reports / tr35 /
[274] [275] [276] [277] [278] [279] [280] [281] [282]
Underfull \hbox (badness 1442) in paragraph at lines 18477--18479
[]\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed 
and by [][]\T1/zi4/m/n/10 dev.new[][][]\T1/ptm/m/n/10 : see
[283]
Underfull \hbox (badness 2452) in paragraph at lines 18569--18585
[][][]\T1/zi4/m/n/10 as.character[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.c
omplex[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.double[][][]\T1/ptm/m/n/10 ,
 [][]\T1/zi4/m/n/10 as.integer[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.logi
cal[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.raw[][][]\T1/ptm/m/n/10 , [][]\
T1/zi4/m/n/10 as.vector[][][]\T1/ptm/m/n/10 ,
[284] [285] [286] [287] [288] [289] [290]
Underfull \hbox (badness 1248) in paragraph at lines 18988--18991
[]\T1/zi4/m/n/10 is.atomic \T1/ptm/m/n/10 is true for the [][]atomic[][][] type
s (\T1/zi4/m/n/10 "logical"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "integer"\T1/ptm/m/n
/10 , \T1/zi4/m/n/10 "numeric"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "complex"\T1/ptm/
m/n/10 ,
[291] [292] [293] [294]
Underfull \hbox (badness 4739) in paragraph at lines 19246--19248
[]\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere
d, see
[295] [296] [297] [298] [299] [300]
Underfull \hbox (badness 1596) in paragraph at lines 19665--19670
\T1/ptm/m/n/10 trix or, if \T1/zi4/m/n/10 simplify = "array"\T1/ptm/m/n/10 , an
 ar-ray if ap-pro-pri-ate, by ap-ply-ing \T1/zi4/m/n/10 simplify2array()\T1/ptm
/m/n/10 .
[301] [302] [303] [304] [305] [306] [307] [308] [309] [310] [311]
Underfull \hbox (badness 2469) in paragraph at lines 20269--20274
[]\T1/ptm/m/n/10 In late 2017 a \T1/zi4/m/n/10 libcurl \T1/ptm/m/n/10 in-stal-l
a-tion was seen di-vided into two li-braries, \T1/zi4/m/n/10 libcurl \T1/ptm/m/
n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 20283--20290
[][][]$\T1/zi4/m/n/10 http : / / curl . haxx . se / docs / sslcerts . html$[][]
 \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 http : / / curl . haxx . se / docs /
[312]
Underfull \hbox (badness 10000) in paragraph at lines 20357--20361
[]\T1/ptm/m/n/10 By de-fault \T1/zi4/m/n/10 R_LIBS \T1/ptm/m/n/10 is un-set, an
d \T1/zi4/m/n/10 R_LIBS_USER \T1/ptm/m/n/10 is set to di-rec-tory

Underfull \hbox (badness 2460) in paragraph at lines 20357--20361
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 R/\T1/ptm/m/sl/10 R.version$platform\T1/zi4/m/n/
10 -library/\T1/ptm/m/sl/10 x.y\T1/ptm/m/n/10 ' of the home di-rec-tory (or `\T
1/zi4/m/n/10 Library/R/\T1/ptm/m/sl/10 x.y\T1/zi4/m/n/10 /library\T1/ptm/m/n/10
 '
[313] [314]
Underfull \hbox (badness 1014) in paragraph at lines 20527--20532
[]\T1/ptm/m/n/10 Normally \T1/zi4/m/n/10 library \T1/ptm/m/n/10 re-turns (in-vi
s-i-bly) the list of at-tached pack-ages, but \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/1
0 or \T1/zi4/m/n/10 FALSE \T1/ptm/m/n/10 if
[315] [316] [317] [318] [319] [320] [321] [322] [323] [324] [325] [326]
Underfull \hbox (badness 1264) in paragraph at lines 21317--21322
[]\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways 
be sup-ported:
[327]
Underfull \hbox (badness 4441) in paragraph at lines 21346--21349
[]\T1/ptm/m/n/10 Note that set-ting cat-e-gory \T1/zi4/m/n/10 "LC_ALL" \T1/ptm/
m/n/10 sets only cat-e-gories \T1/zi4/m/n/10 "LC_COLLATE"\T1/ptm/m/n/10 , \T1/z
i4/m/n/10 "LC_CTYPE"\T1/ptm/m/n/10 ,
[328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338]
Underfull \hbox (badness 6047) in paragraph at lines 22093--22095
[]\T1/ptm/m/n/10 The al-go-rithm used by \T1/zi4/m/n/10 make.unique \T1/ptm/m/n
/10 has the prop-erty that \T1/zi4/m/n/10 make.unique(c(A,B)) ==
[339] [340] [341] [342] [343] [344] [345] [346] [347] [348] [349] [350]
[351] [352] [353] [354] [355]
Underfull \hbox (badness 1077) in paragraph at lines 23134--23140
\T1/zi4/m/n/10 / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm/m/n/10 , [][
]$\T1/zi4/m/n/10 http : / / tukaani . org / xz/$[][] \T1/ptm/m/n/10 and [][]$\T
1/zi4/m/n/10 https : / / en . wikipedia .
[356] [357] [358] [359] [360] [361] [362] [363]
Underfull \hbox (badness 2790) in paragraph at lines 23630--23633
[]\T1/zi4/m/n/10 packageStartupMessage \T1/ptm/m/n/10 is a vari-ant whose mes-s
ages can be sup-pressed sep-a-rately by

Underfull \hbox (badness 1571) in paragraph at lines 23630--23633
\T1/zi4/m/n/10 suppressPackageStartupMessages\T1/ptm/m/n/10 . (They are still m
es-sages, so can be sup-pressed by
[364] [365] [366] [367] [368]
Underfull \hbox (badness 1194) in paragraph at lines 23912--23915
[]\T1/ptm/m/n/10 The de-fault method for \T1/zi4/m/n/10 anyNA \T1/ptm/m/n/10 ha
n-dles atomic vec-tors with-out a class and \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 .
 It calls
[369] [370] [371]
Underfull \hbox (badness 2368) in paragraph at lines 24118--24124
[]\T1/ptm/m/n/10 For an [][]\T1/zi4/m/n/10 environment[][][] env\T1/ptm/m/n/10 
, \T1/zi4/m/n/10 names(env) \T1/ptm/m/n/10 gives the names of the cor-re-spond-
ing list, i.e.,

Underfull \hbox (badness 4981) in paragraph at lines 24118--24124
\T1/zi4/m/n/10 names(as.list(env,all.names = TRUE)) \T1/ptm/m/n/10 which are al
so given by [][]\T1/zi4/m/n/10 ls[][][](env,all.names =
[372] [373] [374] [375] [376] [377]
Underfull \hbox (badness 10000) in paragraph at lines 24500--24503
[]\T1/ptm/m/n/10 optional [][]\T1/zi4/m/n/10 logical[][][] \T1/ptm/m/n/10 even-
tu-ally to be passed to \T1/zi4/m/n/10 print()\T1/ptm/m/n/10 , used by
[378] [379] [380] [381] [382] [383] [384] [385] [386]
Underfull \hbox (badness 10000) in paragraph at lines 25105--25107
[]\T1/zi4/m/n/10 isNamespaceLoaded(pkg) \T1/ptm/m/n/10 is equiv-a-lent to but m
ore ef-fi-cient than \T1/zi4/m/n/10 pkg %in%
[387] [388] [389] [390] [391] [392] [393] [394] [395] [396] [397] [398]
[399]
Underfull \hbox (badness 1038) in paragraph at lines 25945--25953
[]\T1/ptm/m/n/10 the pack-ages that are at-tached by de-fault when \T1/phv/m/n/
10 R \T1/ptm/m/n/10 starts up. Ini-tially

Underfull \hbox (badness 1735) in paragraph at lines 25945--25953
\T1/ptm/m/n/10 set from value of the en-vi-ron-ment vari-able \T1/zi4/m/n/10 R_
DEFAULT_PACKAGES\T1/ptm/m/n/10 , or if that is un-

Underfull \hbox (badness 1292) in paragraph at lines 25945--25953
\T1/ptm/m/n/10 set to \T1/zi4/m/n/10 c("datasets","utils","grDevices","graphics
","stats","methods")\T1/ptm/m/n/10 . (Set

Underfull \hbox (badness 1881) in paragraph at lines 25954--25957
[]\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str
ucts which are

Underfull \hbox (badness 6220) in paragraph at lines 25973--25975
[]\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see

[400] [401]
Underfull \hbox (badness 2142) in paragraph at lines 26114--26118
[]\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][]\T1/zi4/m/n/10 postscr
ipt[][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able

Underfull \hbox (badness 1968) in paragraph at lines 26164--26169
[]\T1/ptm/m/n/10 the com-mand used by [][]\T1/zi4/m/n/10 postscript[][][] \T1/p
tm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able
[402] [403] [404] [405]
Underfull \hbox (badness 10000) in paragraph at lines 26452--26458
[]\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][]\T1/zi4/m/
n/10 setRepositories[][][]\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 26452--26458
\T1/ptm/m/n/10 e.g. the de-fault `\T1/zi4/m/n/10 "https://bioconductor.org"\T1/
ptm/m/n/10 ' or the Eu-ro-pean mir-ror

Underfull \hbox (badness 10000) in paragraph at lines 26452--26458
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de"\
T1/ptm/m/n/10 '. Can be set by

Underfull \hbox (badness 10000) in paragraph at lines 26465--26468
[]\T1/ptm/m/n/10 default Cc: ad-dress used by [][]\T1/zi4/m/n/10 create.post[][
][] \T1/ptm/m/n/10 (and hence[][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/n/10
 and

Underfull \hbox (badness 2689) in paragraph at lines 26491--26493
[]\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na
l HTTP server, see

Underfull \hbox (badness 10000) in paragraph at lines 26526--26531
[]\T1/ptm/m/n/10 Used by [][]\T1/zi4/m/n/10 install.packages[][][] \T1/ptm/m/n/
10 (and in-di-rectly

Underfull \hbox (badness 2529) in paragraph at lines 26532--26543
\T1/ptm/m/n/10 in-di-rectly [][]\T1/zi4/m/n/10 update.packages[][][]\T1/ptm/m/n
/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si-

Underfull \hbox (badness 2512) in paragraph at lines 26532--26543
\T1/ptm/m/n/10 ble val-ues are \T1/zi4/m/n/10 "never"\T1/ptm/m/n/10 , \T1/zi4/m
/n/10 "interactive" \T1/ptm/m/n/10 (which means ask in in-ter-ac-tive use and
[406]
Underfull \hbox (badness 7203) in paragraph at lines 26544--26547
[]\T1/ptm/m/n/10 default email-ing method used by [][]\T1/zi4/m/n/10 create.pos
t[][][] \T1/ptm/m/n/10 and hence [][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/
n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 26568--26573
[]\T1/zi4/m/n/10 "source" \T1/ptm/m/n/10 (the de-fault ex-cept un-der a CRAN ma
-cOS build),

Underfull \hbox (badness 2057) in paragraph at lines 26568--26573
\T1/zi4/m/n/10 "mac.binary.el-capitan" \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "both"
 \T1/ptm/m/n/10 (the de-fault for CRAN ma-cOS builds).
[407] [408] [409] [410] [411] [412] [413] [414]
Underfull \hbox (badness 10000) in paragraph at lines 27086--27089
[]\T1/zi4/m/n/10 str2expression(s) \T1/ptm/m/n/10 and \T1/zi4/m/n/10 str2lang(s
) \T1/ptm/m/n/10 re-turn spe-cial ver-sions of
[415]
Underfull \hbox (badness 7925) in paragraph at lines 27165--27169
[]\T1/ptm/m/n/10 for a [][]\T1/zi4/m/n/10 character[][][] \T1/ptm/m/n/10 vec-to
r \T1/zi4/m/n/10 s\T1/ptm/m/n/10 , \T1/zi4/m/n/10 str2expression(s) \T1/ptm/m/n
/10 cor-re-sponds to

Underfull \hbox (badness 1622) in paragraph at lines 27165--27169
[][]\T1/zi4/m/n/10 parse[][][](text = s,keep.source=FALSE)\T1/ptm/m/n/10 , whic
h is al-ways of type ([][]\T1/zi4/m/n/10 typeof[][][]\T1/ptm/m/n/10 ) and [][]\
T1/zi4/m/n/10 class[][][]

Underfull \hbox (badness 6125) in paragraph at lines 27170--27179
[]\T1/ptm/m/n/10 for a [][]\T1/zi4/m/n/10 character[][][] \T1/ptm/m/n/10 string
 \T1/zi4/m/n/10 s\T1/ptm/m/n/10 , \T1/zi4/m/n/10 str2lang(s) \T1/ptm/m/n/10 cor
-re-sponds to [][]\T1/zi4/m/n/10 parse[][][](text =
[416] [417] [418] [419] [420] [421] [422] [423] [424] [425] [426]
Underfull \hbox (badness 2726) in paragraph at lines 27891--27894
[]\T1/ptm/m/n/10 character string (or \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 ) in-di
-cat-ing [][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 val-ues in printed out-put,
 see
[427] [428] [429] [430] [431] [432] [433] [434] [435] [436] [437] [438]
[439] [440] [441] [442] [443] [444]
Underfull \vbox (badness 3803) has occurred while \output is active [445]
[446] [447] [448] [449] [450] [451] [452]
Underfull \hbox (badness 1533) in paragraph at lines 29582--29585
[]\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca
n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the
[453] [454] [455]
Underfull \hbox (badness 1163) in paragraph at lines 29745--29756
[]\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no \T1/zi4/m/n/10 NA\
T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in
[456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467]
[468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479]
Underfull \hbox (badness 10000) in paragraph at lines 31291--31295
[]\T1/zi4/m/n/10 regexpr \T1/ptm/m/n/10 and \T1/zi4/m/n/10 gregexpr \T1/ptm/m/n
/10 sup-port `named cap-ture'. If groups are named, e.g.,

Underfull \hbox (badness 1221) in paragraph at lines 31291--31295
\T1/zi4/m/n/10 "(?<first>[A-Z][a-z]+)" \T1/ptm/m/n/10 then the po-si-tions of t
he matches are also re-turned by name.

Underfull \hbox (badness 6188) in paragraph at lines 31313--31315
[]\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 http : / / p
ubs . opengroup . org / onlinepubs / 9699919799 /
[480] [481] [482] [483] [484] [485] [486] [487] [488]
Underfull \hbox (badness 1655) in paragraph at lines 31869--31871
[]\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for \T1/zi4/m/n/10 rle()\T1/ptm
/m/n/10 ; an ob-ject of class \T1/zi4/m/n/10 "rle" \T1/ptm/m/n/10 for
[489] [490] [491] [492] [493] [494] [495] [496] [497] [498] [499] [500]
[501] [502] [503] [504] [505]
Underfull \hbox (badness 2261) in paragraph at lines 32988--32993
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 strip.white \T1/ptm/m/n/10 is of length 1, i
t ap-plies to all fields; oth-er-wise, if
[506]
Underfull \hbox (badness 10000) in paragraph at lines 33015--33021
[]\T1/ptm/m/n/10 The es-capes which are in-ter-preted are the con-trol char-ac-
ters

Underfull \hbox (badness 1484) in paragraph at lines 33015--33021
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 \a,\b,\f,\n,\r,\t,\v\T1/ptm/m/n/10 ' and oc-tal 
and hex-adec-i-mal rep-re-sen-ta-tions like
[507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518]
[519] [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530]
[531] [532] [533] [534] [535] [536] [537] [538] [539] [540] [541] [542]
[543] [544] [545] [546] [547] [548] [549] [550] [551] [552] [553] [554]
Underfull \hbox (badness 1072) in paragraph at lines 36157--36161
[]\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea
d from the file spec-i-fied by

Underfull \hbox (badness 10000) in paragraph at lines 36162--36166
[]\T1/ptm/m/n/10 The command-line op-tion `\T1/zi4/m/n/10 --vanilla\T1/ptm/m/n/
10 ' im-plies `\T1/zi4/m/n/10 --no-site-file\T1/ptm/m/n/10 ', `\T1/zi4/m/n/10 -
-no-init-file\T1/ptm/m/n/10 ',

Underfull \hbox (badness 10000) in paragraph at lines 36190--36196
[]\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file
s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 '

Underfull \hbox (badness 10000) in paragraph at lines 36190--36196
\T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for
 first in architecture-specific di-rec-to-ries,

Underfull \hbox (badness 1320) in paragraph at lines 36190--36196
\T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R
environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/
n/10 ' will be used in

Underfull \hbox (badness 3009) in paragraph at lines 36202--36209
[]\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is 
also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt
m/m/n/10 ' which is read

Underfull \hbox (badness 1038) in paragraph at lines 36202--36209
\T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron-
ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the

Underfull \hbox (badness 2573) in paragraph at lines 36202--36209
\T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i
n site or user en-vi-ron-ment

Underfull \hbox (badness 1917) in paragraph at lines 36202--36209
\T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/
n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from
[555] [556] [557] [558] [559] [560]
Underfull \hbox (badness 1142) in paragraph at lines 36556--36562
[]\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the \T1/zi4/m/n/10 form
at \T1/ptm/m/n/10 meth-ods is \T1/zi4/m/n/10 "%Y-%m-%d
[561] [562] [563] [564] [565] [566] [567] [568] [569] [570] [571] [572]
[573] [574] [575] [576] [577] [578] [579] [580]
Underfull \hbox (badness 1565) in paragraph at lines 37829--37831
[]\T1/ptm/m/n/10 integer code used in \T1/zi4/m/n/10 quantile(*,type=quantile.t
ype) \T1/ptm/m/n/10 for the de-fault
[581] [582] [583] [584] [585] [586] [587] [588] [589] [590]
Underfull \hbox (badness 4967) in paragraph at lines 38428--38433
[]\T1/ptm/m/n/10 If a file-name starts with \T1/zi4/m/n/10 . \T1/ptm/m/n/10 thi
s may need to be matched ex-plic-itly: for ex-am-ple
[591] [592]
Underfull \hbox (badness 1616) in paragraph at lines 38541--38546
\T1/zi4/m/n/10 system("id") \T1/ptm/m/n/10 is much more portable on Unix-alikes
, pro-vided only the POSIX op-tions
[593] [594] [595] [596] [597] [598] [599] [600]
Underfull \hbox (badness 1472) in paragraph at lines 39067--39070
[]\T1/ptm/m/n/10 logical. If \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , func-tions kee
p their source in-clud-ing com-ments, see
[601] [602] [603] [604] [605] [606] [607] [608] [609] [610] [611] [612]
[613] [614]
Underfull \hbox (badness 10000) in paragraph at lines 39981--39985
[]\T1/ptm/m/n/10 On 64-bit plat-forms \T1/zi4/m/n/10 bin \T1/ptm/m/n/10 can hav
e $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., \T1/zi4/m/n/10
 length(bin) >
[615] [616] [617] [618]
Underfull \hbox (badness 10000) in paragraph at lines 40232--40235
[][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [
][]$https : / / developer . r-[]project . org /
[619] [620] [621]
Underfull \hbox (badness 10000) in paragraph at lines 40416--40420
[][][]\T1/zi4/m/n/10 addTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 r
emoveTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 taskCallbackManager[
][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer .
[622] [623] [624] [625] [626] [627] [628] [629] [630]
Underfull \hbox (badness 10000) in paragraph at lines 41029--41032
[][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][
] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[
]zones /
[631] [632] [633] [634] [635] [636]
Underfull \vbox (badness 10000) has occurred while \output is active [637]
[638] [639] [640] [641] [642] [643] [644]
Underfull \hbox (badness 1990) in paragraph at lines 41933--41941
[]\T1/zi4/m/n/10 try \T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any e
r-rors that oc-cur dur-ing the eval-u-a-tion. If

Underfull \hbox (badness 4846) in paragraph at lines 41933--41941
\T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][
]\T1/zi4/m/n/10 stderr[][][] \T1/ptm/m/n/10 con-nec-tion un-less
[645] [646] [647] [648] [649] [650] [651] [652]
Underfull \hbox (badness 1917) in paragraph at lines 42439--42446
[]\T1/ptm/m/n/10 When a func-tion call-ing \T1/zi4/m/n/10 UseMethod("fun") \T1/
ptm/m/n/10 is ap-plied to an ob-ject with class at-tribute
[653] [654] [655] [656] [657] [658] [659] [660] [661] [662] [663]
Underfull \hbox (badness 3668) in paragraph at lines 43168--43170
[]\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di-
ately, even if
[664] [665]
Underfull \hbox (badness 2401) in paragraph at lines 43296--43300
[]\T1/ptm/m/n/10 See the de-scrip-tion of [][]\T1/zi4/m/n/10 options[][][]("war
n") \T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a
[666] [667] [668]
Underfull \hbox (badness 2111) in paragraph at lines 43485--43490
\T1/ptm/m/n/10 If [][]\T1/zi4/m/n/10 names[][][](.dimnames) \T1/ptm/m/n/10 is n
ot empty, these are used as col-umn names.

Underfull \hbox (badness 10000) in paragraph at lines 43506--43511
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 arr.ind == TRUE \T1/ptm/m/n/10 and \T1/zi4/m
/n/10 x \T1/ptm/m/n/10 is an [][]\T1/zi4/m/n/10 array[][][] \T1/ptm/m/n/10 (has
 a [][]\T1/zi4/m/n/10 dim[][][] \T1/ptm/m/n/10 at-tribute), the re-sult is
[669] [670] [671] [672] [673] [674] [675] [676] [677]
Underfull \hbox (badness 5417) in paragraph at lines 44088--44092
[]\T1/zi4/m/n/10 .packages() \T1/ptm/m/n/10 re-turns the names of the cur-rentl
y at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas
[678]
Underfull \hbox (badness 10000) in paragraph at lines 44149--44153
[]\T1/zi4/m/n/10 .standard_regexps \T1/ptm/m/n/10 re-turns a list of `stan-dard
' reg-exps, in-clud-ing el-e-ments named
[679] [680]) (./compiler-pkg.tex
Chapter 2.
[681] [682] [683] [684]) (./datasets-pkg.tex
Chapter 3.
[685] [686] [687] [688] [689] [690] [691] [692] [693] [694] [695] [696]
[697] [698] [699] [700] [701]
Underfull \hbox (badness 1097) in paragraph at lines 1031--1035
[]\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th
e iden-ti-fi-ca-tion of crim-i-nals.
[702] [703] [704] [705] [706] [707] [708] [709] [710] [711] [712] [713]
[714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724]
Underfull \vbox (badness 1448) has occurred while \output is active [725]
[726] [727] [728] [729] [730] [731] [732] [733] [734] [735] [736]
Overfull \vbox (19.74611pt too high) has occurred while \output is active
[737] [738] [739] [740] [741] [742] [743] [744] [745] [746] [747] [748]
[749] [750] [751] [752]
Underfull \vbox (badness 10000) has occurred while \output is active [753]
[754] [755] [756]
Underfull \vbox (badness 10000) has occurred while \output is active [757]
[758] [759] [760] [761] [762] [763] [764] [765] [766]) (./grDevices-pkg.tex
Chapter 4.
[767] [768] [769] [770] [771]
Underfull \hbox (badness 3158) in paragraph at lines 282--286
[]\T1/ptm/m/n/10 numeric vec-tor of length 3, \T1/zi4/m/n/10 c(mi,ma,n.)\T1/ptm
/m/n/10 , with iden-ti-cal mean-ing to

Underfull \hbox (badness 10000) in paragraph at lines 298--303
[]\T1/ptm/m/n/10 Apart from that, [][]\T1/zi4/m/n/10 axisTicks[][][]() \T1/ptm/
m/n/10 just calls the C func-tion \T1/zi4/m/n/10 CreateAtVector() \T1/ptm/m/n/1
0 in

Underfull \hbox (badness 1852) in paragraph at lines 298--303
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 <Rsrc>/src/main/plot.c\T1/ptm/m/n/10 ' which is 
also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t
ion
[772] [773] [774] [775] [776] [777] [778] [779]
Underfull \hbox (badness 1424) in paragraph at lines 830--832
[][][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) and 
\T1/zi4/m/n/10 "NA" \T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i
-fied as
[780] [781] [782] [783] [784]
Underfull \hbox (badness 5175) in paragraph at lines 1124--1126
[]\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm
. The source code is in
[785] [786] [787] [788]
Underfull \hbox (badness 1852) in paragraph at lines 1326--1329
[]\T1/zi4/m/n/10 densCols \T1/ptm/m/n/10 com-putes and re-turns the set of col-
ors that will be used in plot-ting, call-ing
[789] [790] [791]
Underfull \hbox (badness 1490) in paragraph at lines 1532--1537
\T1/ptm/m/n/10 by [][]\T1/zi4/m/n/10 rasterImage[][][] \T1/ptm/m/n/10 and [][]\
T1/zi4/m/n/10 grid.raster[][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues \T1/zi4/m/n/
10 "no"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "yes" \T1/ptm/m/n/10 and
[792] [793] [794] [795] [796] [797]
Underfull \hbox (badness 1325) in paragraph at lines 1938--1948
\T1/zi4/m/n/10 "png48"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pngmono"\T1/ptm/m/n/10 ,
 \T1/zi4/m/n/10 "pnggray"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pngalpha"\T1/ptm/m/n/
10 , \T1/zi4/m/n/10 "bmp16"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "bmp16m" "bmp256"\T1
/ptm/m/n/10 , \T1/zi4/m/n/10 "bmp32b"\T1/ptm/m/n/10 ,
[798] [799]
Underfull \hbox (badness 10000) in paragraph at lines 2050--2052
[]\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the 
set-ting of
[800] [801] [802]
Underfull \hbox (badness 6758) in paragraph at lines 2228--2231
[]\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript
 doc-u-men-ta-tion) are
[803] [804] [805] [806] [807] [808] [809] [810] [811] [812]
Underfull \hbox (badness 10000) in paragraph at lines 2832--2833

[813] [814] [815] [816] [817] [818] [819] [820] [821]
Underfull \hbox (badness 10000) in paragraph at lines 3388--3393
[]\T1/zi4/m/n/10 nclass.FD \T1/ptm/m/n/10 uses the Freedman-Diaconis choice bas
ed on the inter-quartile range
[822] [823] [824] [825] [826]
Underfull \vbox (badness 10000) has occurred while \output is active [827]
Underfull \hbox (badness 10000) in paragraph at lines 3789--3792
[]\T1/ptm/m/n/10 For use with \T1/zi4/m/n/10 onefile = FALSE \T1/ptm/m/n/10 giv
e a C in-te-ger for-mat such as
[828] [829] [830] [831] [832] [833] [834] [835] [836] [837] [838]
Underfull \hbox (badness 10000) in paragraph at lines 4518--4523
[][][]$\T1/zi4/m/n/10 https : / / www . adobe . com / content / dam / acom / en
 / devnet / actionscript / articles / PLRM . pdf$[][]

Underfull \hbox (badness 4181) in paragraph at lines 4518--4523
\T1/ptm/m/n/10 or PDF [][]$\T1/zi4/m/n/10 https : / / www . adobe . com / devne
t / acrobat / pdfs / pdf _ reference _ 1-[]7 . pdf$[][] \T1/ptm/m/n/10 and in
[839]
Underfull \vbox (badness 10000) has occurred while \output is active [840]
[841]
Underfull \hbox (badness 1067) in paragraph at lines 4672--4679
\T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled
 with sup-
[842] [843] [844] [845]
Underfull \hbox (badness 1377) in paragraph at lines 4975--4980
[]\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently 
al-lowed val-ues
[846]
Underfull \hbox (badness 1418) in paragraph at lines 5051--5058
\T1/ptm/m/n/10 it is one of \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4
/m/n/10 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/
zi4/m/n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm
/m/n/10 ,

Underfull \hbox (badness 1755) in paragraph at lines 5069--5071
[]\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East 
Asian lan-guages -- see
[847] [848]
Underfull \hbox (badness 1377) in paragraph at lines 5180--5185
[]\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are \
T1/zi4/m/n/10 "rgb" \T1/ptm/m/n/10 (which is RGB+gray) and
[849]
Underfull \hbox (badness 7344) in paragraph at lines 5249--5251
[]\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t
ion by Brian D'Urso
[850] [851]
Underfull \hbox (badness 2035) in paragraph at lines 5384--5393
[]\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv
-a-lents) are also pro-

Underfull \hbox (badness 10000) in paragraph at lines 5384--5393
\T1/ptm/m/n/10 vided: \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/zi4/m/
n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm/m/n/1
0 ,

Underfull \hbox (badness 10000) in paragraph at lines 5384--5393
\T1/zi4/m/n/10 "NewCenturySchoolbook"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Palatino"
 \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "Times"\T1/ptm/m/n/10 ; \T1/zi4/m/n/10 "URWG
othic"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "URWBookman"\T1/ptm/m/n/10 ,
[852]
Underfull \hbox (badness 10000) in paragraph at lines 5452--5459
[]\T1/zi4/m/n/10 BousungEG-Light-GB \T1/ptm/m/n/10 can be found at [][]$\T1/zi4
/m/n/10 ftp : / / ftp . gnu . org / pub / non-[]gnu /

Underfull \hbox (badness 2189) in paragraph at lines 5452--5459
\T1/zi4/m/n/10 chinese-[]fonts-[]truetype/$[][]\T1/ptm/m/n/10 . Ken Lunde's CJK
V re-sources are at [][]$\T1/zi4/m/n/10 ftp : / / ftp . oreilly .
[853] [854] [855]
Underfull \hbox (badness 1546) in paragraph at lines 5594--5602
[]\T1/ptm/m/n/10 arguments \T1/zi4/m/n/10 onefile\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 family\T1/ptm/m/n/10 , \T1/zi4/m/n/10 title\T1/ptm/m/n/10 , \T1/zi4/m/n/10 fo
nts\T1/ptm/m/n/10 , \T1/zi4/m/n/10 encoding\T1/ptm/m/n/10 , \T1/zi4/m/n/10 bg\T
1/ptm/m/n/10 , \T1/zi4/m/n/10 fg\T1/ptm/m/n/10 , \T1/zi4/m/n/10 width\T1/ptm/m/
n/10 ,
[856] [857] [858] [859] [860] [861] [862] [863]
Underfull \hbox (badness 10000) in paragraph at lines 6129--6132
[]\T1/zi4/m/n/10 rgb2hsv \T1/ptm/m/n/10 trans-forms col-ors from RGB space (red
/green/blue) into HSV space
[864] [865] [866] [867] [868] [869] [870] [871] [872] [873] [874] [875]
[876]
Underfull \hbox (badness 1189) in paragraph at lines 6951--6953
[]\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used
. One of
[877]
Underfull \hbox (badness 10000) in paragraph at lines 7049--7051
[]\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" \T1/ptm/m/n/10 for CJK 
lan-guages and
[878] [879] [880] [881] [882]
Underfull \hbox (badness 3780) in paragraph at lines 7349--7355
[]\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of \T1/zi4/m/n/1
0 "AvantGarde"\T1/ptm/m/n/10 ,
[883] [884] [885]
Underfull \hbox (badness 2680) in paragraph at lines 7550--7552
[]\T1/ptm/m/n/10 multiplicities (pos-i-tive in-te-gers); i.e., \T1/zi4/m/n/10 n
umber[i] \T1/ptm/m/n/10 is the mul-ti-plic-ity of
[886] [887] [888]) (./graphics-pkg.tex
Chapter 5.
[889] [890] [891] [892] [893] [894] [895] [896] [897] [898] [899] [900]
[901] [902] [903] [904] [905] [906] [907] [908] [909] [910]
Underfull \hbox (badness 4634) in paragraph at lines 1351--1354
[][][]\T1/zi4/m/n/10 boxplot.default[][][] \T1/ptm/m/n/10 which al-ready works 
nowa-days with data.frames; [][]\T1/zi4/m/n/10 boxplot.formula[][][]\T1/ptm/m/n
/10 ,
[911] [912] [913] [914] [915] [916] [917] [918] [919] [920] [921] [922]
[923] [924] [925] [926]
Underfull \hbox (badness 1728) in paragraph at lines 2308--2310
[]\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use \T1/zi4/m/n/10 "n
" \T1/ptm/m/n/10 to sup-press and see also
[927] [928]
Underfull \hbox (badness 1009) in paragraph at lines 2399--2406
\T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n
ot ap-ply to
[929] [930] [931] [932] [933] [934] [935] [936] [937] [938] [939] [940]
[941] [942] [943] [944] [945] [946] [947] [948] [949] [950]
Underfull \vbox (badness 10000) has occurred while \output is active [951]
[952] [953] [954] [955] [956] [957] [958] [959] [960] [961] [962] [963]
Underfull \hbox (badness 3229) in paragraph at lines 4544--4549
[]\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are 
to be used, see
[964] [965] [966] [967] [968]
Underfull \hbox (badness 10000) in paragraph at lines 4901--4907
[]\T1/ptm/b/it/10 R.O.\T1/ptm/m/n/10 ; size of de-fault char-ac-ter \T1/zi4/m/n
/10 (width,height) \T1/ptm/m/n/10 in user co-or-di-nate units.

Underfull \hbox (badness 5908) in paragraph at lines 4901--4907
\T1/zi4/m/n/10 par("cxy") \T1/ptm/m/n/10 is \T1/zi4/m/n/10 par("cin")/par("pin"
) \T1/ptm/m/n/10 scaled to user co-or-di-nates. Note that
[969]
Underfull \hbox (badness 10000) in paragraph at lines 5032--5035

[970]
Underfull \hbox (badness 10000) in paragraph at lines 5093--5095

[971 </<<PKGBUILDDIR>>/library/graphics/help/figures/
mai.pdf>] [972 </<<PKGBUILDDIR>>/library/graphics/hel
p/figures/oma.pdf>] [973]
Underfull \hbox (badness 10000) in paragraph at lines 5283--5285
[]\T1/ptm/m/n/10 The five stan-dard dash-dot line types (\T1/zi4/m/n/10 lty = 2
:6\T1/ptm/m/n/10 ) cor-re-spond to
[974]
Underfull \vbox (badness 3803) has occurred while \output is active [975]
[976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987]
[988] [989] [990] [991] [992] [993] [994] [995] [996]
Overfull \hbox (31.57222pt too wide) in paragraph at lines 6761--6762
[][] 
[997] [998 </<<PKGBUILDDIR>>/library/graphics/help/fi
gures/pch.pdf>] [999] [1000] [1001] [1002] [1003] [1004] [1005] [1006] [1007]
[1008] [1009] [1010]
Underfull \hbox (badness 2012) in paragraph at lines 7586--7589
[]\T1/ptm/m/n/10 For each \T1/zi4/m/n/10 i\T1/ptm/m/n/10 , a line seg-ment is d
rawn be-tween the point \T1/zi4/m/n/10 (x0[i],y0[i]) \T1/ptm/m/n/10 and the poi
nt
[1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021]
[1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031]
Underfull \hbox (badness 10000) in paragraph at lines 8846--8848
[]\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color

Underfull \hbox (badness 10000) in paragraph at lines 8848--8850
[]\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color
[1032]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.uni
ts}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.8928 \HeaderA{units}{Graphical Units}{units}
                                               [1033] [1034] [1035] [1036])
(./grid-pkg.tex
Chapter 6.

Underfull \vbox (badness 10000) has occurred while \output is active [1037]
[1038] [1039] [1040] [1041] [1042] [1043] [1044]
Underfull \hbox (badness 2680) in paragraph at lines 483--486
[]\T1/ptm/m/n/10 Note that \T1/zi4/m/n/10 preDrawDetails \T1/ptm/m/n/10 and \T1
/zi4/m/n/10 postDrawDetails \T1/ptm/m/n/10 are also called in the cal-cu-la-tio
n of
[1045] [1046] [1047] [1048] [1049] [1050] [1051] [1052] [1053] [1054]
Underfull \hbox (badness 4279) in paragraph at lines 1064--1073
[][][]\T1/ptm/m/n/10 Grid[][][], [][]\T1/zi4/m/n/10 pushViewport[][][]\T1/ptm/m
/n/10 , [][]\T1/zi4/m/n/10 popViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10
 downViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 seekViewport[][][]\T1/pt
m/m/n/10 , [][]\T1/zi4/m/n/10 upViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/
10 unit[][][]\T1/ptm/m/n/10 ,
[1055] [1056] [1057] [1058] [1059] [1060] [1061] [1062] [1063] [1064] [1065]
[1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] [1076]
[1077] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087]
[1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098]
Underfull \vbox (badness 10000) has occurred while \output is active [1099]
[1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110]
[1111] [1112]
Underfull \hbox (badness 1067) in paragraph at lines 4486--4489
[]\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec
t de-scrib-ing seg-ments), but only
[1113] [1114] [1115] [1116]
Underfull \hbox (badness 7256) in paragraph at lines 4731--4733
[]\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject
s are co-erced by
[1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] [1127]
[1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] [1137] [1138]
[1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147]
Underfull \hbox (badness 1824) in paragraph at lines 6535--6538
[]\T1/ptm/m/n/10 This can be use-ful for re-turn-ing to your start-ing point by
 do-ing some-thing like \T1/zi4/m/n/10 depth
[1148] [1149] [1150] [1151]) (./methods-pkg.tex [1152]
Chapter 7.
[1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160]
Underfull \vbox (badness 10000) has occurred while \output is active [1161]
Underfull \vbox (badness 10000) has occurred while \output is active [1162]
[1163] [1164] [1165] [1166] [1167] [1168] [1169] [1170] [1171]
Underfull \hbox (badness 2237) in paragraph at lines 1385--1387
[]\T1/ptm/m/n/10 The class \T1/zi4/m/n/10 "className" \T1/ptm/m/n/10 ex-tends \
T1/zi4/m/n/10 "character" \T1/ptm/m/n/10 and has a slot \T1/zi4/m/n/10 "package
"\T1/ptm/m/n/10 , also of class
[1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179]
Underfull \hbox (badness 2181) in paragraph at lines 1932--1939
[]\T1/ptm/m/n/10 Two vir-tual classes are sup-plied to test for ref-er-ence ob-
jects: \T1/zi4/m/n/10 is(x,"refClass") \T1/ptm/m/n/10 tests
[1180]
Underfull \hbox (badness 10000) in paragraph at lines 1981--1986
[]\T1/ptm/m/n/10 The ar-gu-ment to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/10 c
an be an ob-ject of class

Underfull \hbox (badness 1038) in paragraph at lines 1981--1986
\T1/ptm/m/n/10 file name is passed to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/1
0 it calls \T1/zi4/m/n/10 evalSource \T1/ptm/m/n/10 to ob-tain the
[1181] [1182] [1183]
Underfull \hbox (badness 2213) in paragraph at lines 2214--2219
[]\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age
, use \T1/zi4/m/n/10 where =
[1184] [1185] [1186] [1187] [1188]
Underfull \hbox (badness 10000) in paragraph at lines 2574--2577
[]\T1/ptm/m/n/10 As you might ex-pect [][]\T1/zi4/m/n/10 setGeneric[][][] \T1/p
tm/m/n/10 and [][]\T1/zi4/m/n/10 setGroupGeneric[][][] \T1/ptm/m/n/10 cre-ate o
b-jects of class
[1189] [1190]
Underfull \hbox (badness 1132) in paragraph at lines 2714--2718
[]\T1/ptm/m/n/10 In \T1/zi4/m/n/10 getGenerics\T1/ptm/m/n/10 , if \T1/zi4/m/n/1
0 TRUE\T1/ptm/m/n/10 , the \T1/zi4/m/n/10 package \T1/ptm/m/n/10 slot of the re
-turned re-sult is in
[1191]
Underfull \hbox (badness 1033) in paragraph at lines 2746--2751
\T1/ptm/m/n/10 In ad-di-tion, \T1/zi4/m/n/10 removeGeneric \T1/ptm/m/n/10 re-mo
ves the func-tion it-self; \T1/zi4/m/n/10 removeMethods \T1/ptm/m/n/10 re-store
s the
[1192] [1193] [1194] [1195] [1196] [1197] [1198]
Underfull \hbox (badness 1102) in paragraph at lines 3303--3305
[]\T1/zi4/m/n/10 getPackageName \T1/ptm/m/n/10 re-turns the character-string na
me of the pack-age (with-out the ex-tra-ne-ous
[1199] [1200] [1201] [1202] [1203]
Underfull \hbox (badness 10000) in paragraph at lines 3634--3639
[]\T1/ptm/m/n/10 The \T1/zi4/m/n/10 initialize \T1/ptm/m/n/10 method for these 
classes takes spe-cial ar-gu-ments
[1204]
Underfull \hbox (badness 10000) in paragraph at lines 3642--3651
[]\T1/ptm/m/n/10 The
[1205]
Underfull \hbox (badness 10000) in paragraph at lines 3762--3763
[] \T1/zi4/m/n/10 Pos <-setClass("Pos",slots = c(latitude = "numeric",longitude
 = "numeric",altitude
[1206] [1207] [1208] [1209] [1210] [1211] [1212] [1213] [1214] [1215] [1216]
Underfull \hbox (badness 1769) in paragraph at lines 4472--4478
[]\T1/ptm/m/n/10 class [][]\T1/zi4/m/n/10 MethodsList[][][] \T1/ptm/m/n/10 for 
the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar

Underfull \hbox (badness 1939) in paragraph at lines 4472--4478
\T1/zi4/m/n/10 MethodDefinition\T1/ptm/m/n/10 , or an ex-ten-sion. Class [][]\T
1/zi4/m/n/10 MethodWithNext[][][] \T1/ptm/m/n/10 for an ex-ten-sion used by
[1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226]
Underfull \vbox (badness 10000) has occurred while \output is active [1227]
[1228] [1229]
Underfull \hbox (badness 4036) in paragraph at lines 5437--5440
[]\T1/ptm/m/n/10 Object of class \T1/zi4/m/n/10 "PossibleMethod" \T1/ptm/m/n/10
 the method to use in re-sponse to a
[1230]
Underfull \hbox (badness 3803) in paragraph at lines 5512--5514
[]\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p
assed to
[1231] [1232] [1233] [1234]
Underfull \hbox (badness 1087) in paragraph at lines 5744--5749
[]\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o
ds for this class are found (us-ing
[1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242]
Underfull \hbox (badness 1675) in paragraph at lines 6451--6457
\T1/ptm/m/n/10 can be con-verted ex-plic-itly as \T1/zi4/m/n/10 externalRefMeth
od(f)\T1/ptm/m/n/10 , which re-turns an ob-ject of class
[1243] [1244] [1245] [1246]
Underfull \vbox (badness 10000) has occurred while \output is active [1247]
[1248] [1249] [1250]pdfTeX warning (ext4): destination with the same identifier
 (name{Rfn.S4}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.6973 \aliasA{S4}{S3Part}{S4}
                               [1251] [1252] [1253]pdfTeX warning (ext4): desti
nation with the same identifier (name{Rfn.Complex}) has been already used, dupl
icate ignored
<to be read again> 
                   \relax 
l.7229 \aliasA{Complex}{S4groupGeneric}{Complex}
                                                pdfTeX warning (ext4): destinat
ion with the same identifier (name{Rfn.Logic}) has been already used, duplicate
 ignored
<to be read again> 
                   \relax 
l.7231 \aliasA{Logic}{S4groupGeneric}{Logic}
                                            pdfTeX warning (ext4): destination 
with the same identifier (name{Rfn.Math}) has been already used, duplicate igno
red
<to be read again> 
                   \relax 
l.7232 \aliasA{Math}{S4groupGeneric}{Math}
                                          pdfTeX warning (ext4): destination wi
th the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored

<to be read again> 
                   \relax 
l.7234 \aliasA{Ops}{S4groupGeneric}{Ops}
                                        pdfTeX warning (ext4): destination with
 the same identifier (name{Rfn.Summary}) has been already used, duplicate ignor
ed
<to be read again> 
                   \relax 
l.7235 \aliasA{Summary}{S4groupGeneric}{Summary}
                                                 [1254]
Underfull \hbox (badness 2050) in paragraph at lines 7296--7300
[]\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic 
can be ob-tained by call-ing
[1255] [1256] [1257]
Underfull \hbox (badness 1286) in paragraph at lines 7484--7486
[]\T1/ptm/m/n/10 for \T1/zi4/m/n/10 .selectSuperClasses() \T1/ptm/m/n/10 only, 
a [][]\T1/zi4/m/n/10 list[][][] \T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cal
ly
[1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] [1266] [1267] [1268]
[1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] [1279]
[1280] [1281] [1282] [1283] [1284]
Underfull \vbox (badness 10000) has occurred while \output is active [1285]
[1286] [1287] [1288] [1289] [1290] [1291] [1292]
Underfull \hbox (badness 1137) in paragraph at lines 10011--10019
[]\T1/ptm/m/n/10 Objects can be cre-ated by calls of the form \T1/zi4/m/n/10 ne
w("signature",functionDef,...)\T1/ptm/m/n/10 . The
[1293] [1294] [1295] [1296] [1297] [1298] [1299]
Underfull \hbox (badness 1852) in paragraph at lines 10564--10568
[]\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl
ass, from the data part; e.g.,
[1300] [1301] [1302] [1303]) (./parallel-pkg.tex [1304]
Chapter 8.

Underfull \hbox (badness 5490) in paragraph at lines 14--16
[]\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `\T1/zi4
/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"\T1/ptm/m/n/10 ' [][]RNG[
][][]: see
[1305] [1306] [1307] [1308] [1309] [1310] [1311] [1312] [1313] [1314] [1315]
[1316] [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325]
Underfull \hbox (badness 3386) in paragraph at lines 1365--1368
[]\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by \T1/zi4/m/n/10 .R
andom.seed \T1/ptm/m/n/10 when the
[1326] [1327] [1328]) (./splines-pkg.tex
Chapter 9.

Underfull \hbox (badness 10000) in paragraph at lines 22--24
[]\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 <bates@stat.wisc.edu> \T1/ptm/
m/n/10 and William N. Ven-ables
[1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] [1338] [1339]
[1340] [1341] [1342] [1343] [1344]) (./stats-pkg.tex
Chapter 10.
[1345] [1346] [1347] [1348] [1349] [1350] [1351] [1352] [1353] [1354] [1355]
[1356] [1357] [1358]
Underfull \hbox (badness 1412) in paragraph at lines 875--877
[]\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from \T1/zi4/m/n/10 lm 
\T1/ptm/m/n/10 or \T1/zi4/m/n/10 aov\T1/ptm/m/n/10 , or a for-mula for
[1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366]
Underfull \hbox (badness 2503) in paragraph at lines 1356--1359
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1367] [1368] [1369]
Underfull \hbox (badness 10000) in paragraph at lines 1536--1540
[]\T1/ptm/m/n/10 An ob-ject of class \T1/zi4/m/n/10 c("aov","lm") \T1/ptm/m/n/1
0 or for mul-ti-ple re-sponses of class
[1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] [1379] [1380]
[1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391]
[1392] [1393] [1394] [1395] [1396] [1397] [1398] [1399]
Underfull \hbox (badness 2503) in paragraph at lines 3437--3440
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1400] [1401] [1402] [1403] [1404] [1405] [1406] [1407] [1408] [1409] [1410]
[1411] [1412] [1413] [1414]
Underfull \hbox (badness 1127) in paragraph at lines 4351--4354
[]\T1/ptm/m/n/10 standardized resid-u-als, \T1/zi4/m/n/10 (observed -expected) 
/ sqrt(V)\T1/ptm/m/n/10 , where \T1/zi4/m/n/10 V \T1/ptm/m/n/10 is the
[1415] [1416] [1417] [1418] [1419]
Underfull \hbox (badness 3989) in paragraph at lines 4681--4688
[]\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 
(\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/
it/10 g[] \OT1/cmr/m/n/10 =
[1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] [1428] [1429]
Underfull \hbox (badness 2556) in paragraph at lines 5317--5320
[]\T1/ptm/m/n/10 character; par-tially matched to \T1/zi4/m/n/10 "circular"\T1/
ptm/m/n/10 , \T1/zi4/m/n/10 "open"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "filter"\T1/p
tm/m/n/10 . For

Underfull \hbox (badness 2932) in paragraph at lines 5334--5336
[]\T1/ptm/m/n/10 Note that the usual def-i-ni-tion of con-vo-lu-tion of two se-
quences \T1/zi4/m/n/10 x \T1/ptm/m/n/10 and \T1/zi4/m/n/10 y \T1/ptm/m/n/10 is 
given by
[1430] [1431] [1432] [1433] [1434] [1435] [1436]
Underfull \hbox (badness 2503) in paragraph at lines 5726--5730
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447]
[1448] [1449]
Underfull \hbox (badness 7081) in paragraph at lines 6520--6523
[]\T1/ptm/m/n/10 Objects of class \T1/zi4/m/n/10 "hclust" \T1/ptm/m/n/10 can be
 con-verted to class \T1/zi4/m/n/10 "dendrogram" \T1/ptm/m/n/10 us-ing method

Underfull \hbox (badness 10000) in paragraph at lines 6524--6526
[]\T1/zi4/m/n/10 rev.dendrogram \T1/ptm/m/n/10 sim-ply re-turns the den-dro-gra
m \T1/zi4/m/n/10 x \T1/ptm/m/n/10 with re-versed nodes, see also
[1450] [1451] [1452] [1453] [1454]
Underfull \vbox (badness 3803) has occurred while \output is active [1455]
[1456] [1457] [1458] [1459] [1460] [1461] [1462]
Underfull \hbox (badness 10000) in paragraph at lines 7369--7372
[]\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][]\T
1/zi4/m/n/10 dist[][][]()\T1/ptm/m/n/10 , the
[1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473]
[1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484]
Underfull \vbox (badness 10000) has occurred while \output is active [1485]
[1486] [1487] [1488] [1489]
Underfull \hbox (badness 2626) in paragraph at lines 9048--9051
[]\T1/ptm/m/n/10 Either \T1/zi4/m/n/10 "convolution" \T1/ptm/m/n/10 or \T1/zi4/
m/n/10 "recursive" \T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If
[1490] [1491]
Underfull \hbox (badness 2503) in paragraph at lines 9155--9159
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1492] [1493] [1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] [1502]
[1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511]
Underfull \hbox (badness 4518) in paragraph at lines 10469--10474
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1512] [1513] [1514] [1515] [1516]
Underfull \hbox (badness 2142) in paragraph at lines 10830--10833
[]\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p
tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1
0 dev \OMS/cmsy/m/n/10 ^^@

Underfull \hbox (badness 1253) in paragraph at lines 10849--10852
[]\T1/ptm/m/n/10 When \T1/zi4/m/n/10 trace \T1/ptm/m/n/10 is true, calls to [][
]\T1/zi4/m/n/10 cat[][][] \T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-
er-a-tion. Hence,
[1517]
Underfull \hbox (badness 1708) in paragraph at lines 10911--10915
[]\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter-
na-tives are:
[1518] [1519] [1520] [1521] [1522] [1523]
Underfull \hbox (badness 1694) in paragraph at lines 11307--11310
[]\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these 
de-fault to
[1524] [1525] [1526] [1527] [1528] [1529] [1530] [1531]pdfTeX warning (ext4): d
estination with the same identifier (name{Rfn.hat}) has been already used, dupl
icate ignored
<to be read again> 
                   \relax 
l.11791 \aliasA{hat}{influence.measures}{hat}
                                              [1532] [1533]
Underfull \hbox (badness 1484) in paragraph at lines 11926--11928
[]\T1/ptm/m/n/10 The func-tion \T1/zi4/m/n/10 hat() \T1/ptm/m/n/10 ex-ists main
ly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing
[1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543]
Underfull \hbox (badness 10000) in paragraph at lines 12519--12521
[]\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][]\T1/zi4/m/n/10 solve.defa
ult[][][] \T1/ptm/m/n/10 when \T1/zi4/m/n/10 SSinit =
[1544] [1545] [1546] [1547] [1548] [1549]
Underfull \hbox (badness 2894) in paragraph at lines 12855--12859
[]\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f
ault method
[1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] [1558] [1559] [1560]
[1561]
Underfull \hbox (badness 4518) in paragraph at lines 13605--13610
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1562] [1563] [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571]
Underfull \hbox (badness 4518) in paragraph at lines 14257--14262
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1572] [1573]
Underfull \hbox (badness 8151) in paragraph at lines 14395--14399
[]\T1/ptm/m/n/10 Only for the (de-fault) case \T1/zi4/m/n/10 (surface = "interp
olate",statistics =

Underfull \hbox (badness 1199) in paragraph at lines 14402--14404
[]\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on
ly if \T1/zi4/m/n/10 family \T1/ptm/m/n/10 is
[1574] [1575] [1576] [1577] [1578] [1579] [1580] [1581] [1582] [1583] [1584]
[1585] [1586] [1587] [1588] [1589] [1590] [1591]
Underfull \hbox (badness 2503) in paragraph at lines 15473--15477
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599]
Underfull \hbox (badness 4621) in paragraph at lines 15985--15991
[]\T1/zi4/m/n/10 model.offset \T1/ptm/m/n/10 and \T1/zi4/m/n/10 model.response 
\T1/ptm/m/n/10 are equiv-a-lent to \T1/zi4/m/n/10 model.extract(,"offset") \T1/
ptm/m/n/10 and
[1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610]
[1611] [1612] [1613] [1614] [1615] [1616] [1617] [1618] [1619] [1620] [1621]
[1622] [1623] [1624] [1625] [1626] [1627]
Underfull \vbox (badness 10000) has occurred while \output is active [1628]
Underfull \vbox (badness 10000) has occurred while \output is active [1629]
[1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640]
[1641]
Underfull \hbox (badness 1377) in paragraph at lines 18588--18593
[]\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz
a-tion is per-formed on

Underfull \hbox (badness 1735) in paragraph at lines 18593--18596
[]\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma
-tion to the gra-di-ent, on
[1642]
Underfull \hbox (badness 2343) in paragraph at lines 18606--18610
[]\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i
t is un-able to re-duce

Underfull \hbox (badness 3471) in paragraph at lines 18606--18610
\T1/ptm/m/n/10 the value by a fac-tor of \T1/zi4/m/n/10 reltol * (abs(val) + re
ltol) \T1/ptm/m/n/10 at a step. De-faults to

Underfull \hbox (badness 2662) in paragraph at lines 18614--18618
[]\T1/ptm/m/n/10 The fre-quency of re-ports for the \T1/zi4/m/n/10 "BFGS"\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 "L-BFGS-B" \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "SANN" \
T1/ptm/m/n/10 meth-ods if
[1643] [1644] [1645]
Overfull \hbox (15.73795pt too wide) in paragraph at lines 18839--18839
 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b
ut NM may be ok and "unavoidable",[] 

Overfull \hbox (3.75941pt too wide) in paragraph at lines 18842--18842
 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list(
warn.1d.NelderMead = FALSE)))[] 

Underfull \vbox (badness 10000) has occurred while \output is active [1646]
[1647] [1648] [1649] [1650] [1651] [1652]
Underfull \hbox (badness 1337) in paragraph at lines 19264--19267
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661]
Underfull \hbox (badness 3049) in paragraph at lines 19760--19764
[]\T1/ptm/m/n/10 In the Cook's dis-tance vs leverage/(1-leverage) plot, con-tou
rs of stan-dard-ized resid-u-als
[1662] [1663] [1664] [1665]
Underfull \hbox (badness 1194) in paragraph at lines 20018--20021
[]\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting
 of the con-fi-dence
[1666] [1667] [1668] [1669] [1670] [1671] [1672]
Underfull \hbox (badness 2503) in paragraph at lines 20397--20400
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3919) in paragraph at lines 20424--20426
[]\T1/ptm/m/n/10 the char-ac-ter string \T1/zi4/m/n/10 "Exact Poisson test" \T1
/ptm/m/n/10 or \T1/zi4/m/n/10 "Comparison of Poisson
[1673] [1674] [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683]
[1684] [1685] [1686] [1687] [1688] [1689] [1690]
Underfull \hbox (badness 10000) in paragraph at lines 21501--21507
[]\T1/ptm/m/n/10 For time-series pre-dic-tion, [][]\T1/zi4/m/n/10 predict.ar[][
][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 predict.Arima[][][]\T1/ptm/m/n/10 , [][]
\T1/zi4/m/n/10 predict.arima0[][][]\T1/ptm/m/n/10 ,
[1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] [1701]
[1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712]
[1713]
Underfull \hbox (badness 1337) in paragraph at lines 22855--22861
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721]
Overfull \hbox (27.74408pt too wide) in paragraph at lines 23420--23420
 []  \T1/zi4/m/n/9 t(vapply(1:9, function(typ) quantile(x, prob=prob, type = ty
p, ...), quantile(x, prob, type=1)))[] 
[1722] [1723] [1724] [1725] [1726]
Underfull \hbox (badness 10000) in paragraph at lines 23671--23674
[]\T1/ptm/m/n/10 Optional vec-tor with clus-ter mem-ber-ships as re-turned by

Underfull \hbox (badness 4205) in paragraph at lines 23671--23674
\T1/zi4/m/n/10 cutree(hclust.obj,k = k)\T1/ptm/m/n/10 , can be spec-i-fied for 
ef-fi-ciency if al-ready
[1727] [1728] [1729] [1730] [1731] [1732] [1733] [1734] [1735]
Underfull \hbox (badness 1824) in paragraph at lines 24257--24263
[]\T1/ptm/m/n/10 Here, all the NAs in \T1/zi4/m/n/10 x \T1/ptm/m/n/10 are first
 re-placed by al-ter-

Underfull \hbox (badness 1033) in paragraph at lines 24257--24263
\T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 
where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/
m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where
[1736]
Underfull \hbox (badness 10000) in paragraph at lines 24278--24281
[]\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult \T1/zi4/m/n/10 y = run
med(x,k) \T1/ptm/m/n/10 sim-ply has \T1/zi4/m/n/10 y[j] =

Underfull \hbox (badness 3690) in paragraph at lines 24347--24351
[][][]\T1/zi4/m/n/10 smoothEnds[][][] \T1/ptm/m/n/10 which im-ple-ments Tukey's
 end point rule and is called by de-fault from
[1737]
Underfull \vbox (badness 3803) has occurred while \output is active [1738]
[1739] [1740] [1741] [1742] [1743] [1744] [1745]
Underfull \hbox (badness 2165) in paragraph at lines 24856--24861
[]\T1/ptm/m/n/10 Each of the fol-low-ing are \T1/zi4/m/n/10 "selfStart" \T1/ptm
/m/n/10 mod-els (with ex-am-ples) [][]\T1/zi4/m/n/10 SSasymp[][][]\T1/ptm/m/n/1
0 , [][]\T1/zi4/m/n/10 SSasympOff[][][]\T1/ptm/m/n/10 ,
[1746] [1747] [1748] [1749]
Underfull \hbox (badness 1867) in paragraph at lines 25061--25063
[]\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. 
Passed to

Underfull \hbox (badness 10000) in paragraph at lines 25074--25078
\T1/ptm/m/n/10 where \T1/zi4/m/n/10 NN <-[][]nobs[][][](object,use.fallback = u
se.fallback) \T1/ptm/m/n/10 and \T1/zi4/m/n/10 PP
[1750] [1751] [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] [1760]
Underfull \vbox (badness 3803) has occurred while \output is active [1761]
[1762] [1763] [1764] [1765] [1766] [1767] [1768] [1769] [1770] [1771] [1772]
[1773]
Underfull \vbox (badness 10000) has occurred while \output is active [1774]
Underfull \hbox (badness 3514) in paragraph at lines 26634--26639
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1775] [1776] [1777] [1778]
Overfull \hbox (2.23795pt too wide) in paragraph at lines 26868--26868
 []       \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5]
 == frac(log(2), e^{phi[2]})}),[] 
[1779]
Underfull \hbox (badness 3514) in paragraph at lines 26904--26910
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1780] [1781] [1782] [1783]
Underfull \hbox (badness 3514) in paragraph at lines 27118--27123
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1784]
Underfull \hbox (badness 3514) in paragraph at lines 27205--27210
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1785]
Underfull \hbox (badness 3514) in paragraph at lines 27270--27275
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1786] [1787]
Underfull \hbox (badness 3514) in paragraph at lines 27364--27369
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1788] [1789]
Underfull \hbox (badness 6691) in paragraph at lines 27456--27461
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 x\T1/p
tm/m/n/10 . It is the value of the ex-pres-sion
[1790] [1791] [1792] [1793] [1794] [1795] [1796] [1797]
Underfull \hbox (badness 4024) in paragraph at lines 27984--27987
[]\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion
, which
[1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807]
Underfull \hbox (badness 5431) in paragraph at lines 28590--28592
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1808] [1809] [1810] [1811]
Underfull \hbox (badness 5431) in paragraph at lines 28800--28803
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1812] [1813] [1814] [1815] [1816]
Underfull \hbox (badness 1337) in paragraph at lines 29114--29118
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1817] [1818] [1819] [1820] [1821]
Underfull \hbox (badness 1616) in paragraph at lines 29416--29419
[]\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial
 resid-u-als, when
[1822] [1823] [1824] [1825] [1826] [1827] [1828] [1829] [1830] [1831] [1832]
[1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840]
Underfull \hbox (badness 3557) in paragraph at lines 30546--30550
[]\T1/ptm/m/n/10 Setting \T1/zi4/m/n/10 extendInt \T1/ptm/m/n/10 to a non-\T1/z
i4/m/n/10 "no" \T1/ptm/m/n/10 string, means search-ing for the cor-rect \T1/zi4
/m/n/10 interval =
[1841] [1842] [1843]
Underfull \vbox (badness 10000) has occurred while \output is active [1844]
[1845] [1846]
Underfull \hbox (badness 1337) in paragraph at lines 30910--30914
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] [1855]
Underfull \hbox (badness 1337) in paragraph at lines 31437--31441
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1856] [1857] [1858] [1859] [1860] [1861] [1862] [1863] [1864] [1865])
(./stats4-pkg.tex [1866]
Chapter 11.
[1867] [1868] [1869] [1870] [1871] [1872]pdfTeX warning (ext4): destination wit
h the same identifier (name{Rfn.show.Rdash.methods}) has been already used, dup
licate ignored
<to be read again> 
                   \relax 
l.407 ...Package \pkg{stats4}}{show.Rdash.methods}
                                                   [1873] [1874] [1875])
(./tcltk-pkg.tex [1876]
Chapter 12.
[1877] [1878] [1879] [1880] [1881] [1882] [1883]
Underfull \vbox (badness 10000) has occurred while \output is active [1884]
Underfull \vbox (badness 10000) has occurred while \output is active [1885]
Underfull \hbox (badness 1546) in paragraph at lines 664--671
[]\T1/zi4/m/n/10 tcl \T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-ing
 any Tk or Tcl com-mand by sim-ply run-ning
[1886] [1887] [1888] [1889] [1890] [1891] [1892] [1893] [1894] [1895] [1896]
[1897]) (./tools-pkg.tex [1898]
Chapter 13.
[1899]

LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined
(Font)              using `T1/zi4/m/n' instead on input line 72.

[1900]
Underfull \hbox (badness 3039) in paragraph at lines 164--167
[]\T1/zi4/m/n/10 assertWarning() \T1/ptm/m/n/10 as-serts that a warn-ing will b
e sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas
[1901] [1902]
Underfull \hbox (badness 1308) in paragraph at lines 285--298
[]\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t
o ren-der each of the 12 types

Underfull \hbox (badness 4967) in paragraph at lines 285--298
\T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][]\T1/zi4/m/n/10 bibe
ntry[][][] \T1/ptm/m/n/10 as well as sev-eral other rou-tines de-

Underfull \hbox (badness 10000) in paragraph at lines 285--298
\T1/zi4/m/n/10 formatIncollection\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatInProcee
dings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatManual\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 formatMastersthesis\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 285--298
\T1/zi4/m/n/10 formatMisc\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatPhdthesis\T1/ptm
/m/n/10 , \T1/zi4/m/n/10 formatProceedings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 forma
tTechreport \T1/ptm/m/n/10 and
[1903] [1904]
Underfull \hbox (badness 3039) in paragraph at lines 389--391
[]\T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gine 
to use. Over-rides any
[1905] [1906] [1907] [1908] [1909] [1910] [1911] [1912] [1913] [1914] [1915]
[1916] [1917]
Underfull \hbox (badness 4441) in paragraph at lines 1139--1149
\T1/ptm/m/n/10 giv-ing the repos-i-to-ries to use for lo-cat-ing re-verse de-pe
n-den-cies (de-

Underfull \hbox (badness 1014) in paragraph at lines 1163--1165
[]\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v
erse de-pen-den-cies

Underfull \hbox (badness 7238) in paragraph at lines 1169--1171
[]\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a 
pre-vi-ous
[1918]
Underfull \hbox (badness 10000) in paragraph at lines 1206--1209
[]\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing


Overfull \hbox (15.52087pt too wide) in paragraph at lines 1206--1209
\T1/zi4/m/n/10 summarize_check_packages_in_dir_results \T1/ptm/m/n/10 and \T1/z
i4/m/n/10 summarize_check_packages_in_dir_timings\T1/ptm/m/n/10 ,
[1919] [1920] [1921] [1922] [1923]
Underfull \hbox (badness 2293) in paragraph at lines 1558--1560
[]\T1/zi4/m/n/10 CRAN_memtest_notes() \T1/ptm/m/n/10 is now dep-re-cated, with 
its func-tion-al-ity in-te-grated into that of
[1924] [1925] [1926]
Underfull \hbox (badness 7981) in paragraph at lines 1696--1701
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
 sub-set of

Underfull \hbox (badness 1082) in paragraph at lines 1703--1705
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br
ary trees, or \T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 for all known trees (see
[1927] [1928] [1929]pdfTeX warning (ext4): destination with the same identifier
 (name{Rfn.R.Rul.GSCMD}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.1900 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD}
                                                   [1930] [1931] [1932]
[1933] [1934] [1935]
Overfull \hbox (17.27782pt too wide) in paragraph at lines 2202--2202
 []\T1/zi4/m/n/9 writeLines(paste0("\\newcommand{\\logo}{\\if{html}{\\figure{Rl
ogo.svg}{options: width=100}",[] 
[1936] [1937] [1938]
Underfull \hbox (badness 7981) in paragraph at lines 2371--2377
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
 sub-set of
[1939] [1940] [1941] [1942] [1943] [1944] [1945]

LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 2846.


LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 2847.


LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 2847.

[1946] [1947] [1948] [1949] [1950]
Underfull \hbox (badness 1424) in paragraph at lines 3128--3130
[]\T1/zi4/m/it/10 NULL \T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec-t
or of links, as re-turned by
[1951] [1952] [1953] [1954] [1955] [1956] [1957] [1958] [1959] [1960] [1961]
Underfull \hbox (badness 10000) in paragraph at lines 3832--3834
[]\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run
,
[1962] [1963]
Underfull \hbox (badness 10000) in paragraph at lines 3971--3974
[]\T1/ptm/m/n/10 Where sup-ported (\T1/zi4/m/it/10 texi2dvi \T1/ptm/m/n/10 5.0 
and later; \T1/zi4/m/it/10 texify.exe \T1/ptm/m/n/10 from MiK-TeX), op-tion
[1964] [1965]
Underfull \hbox (badness 1137) in paragraph at lines 4073--4075
[]\T1/ptm/m/n/10 a ma-trix spec-i-fy-ing all pack-ages in-stalled on the lo-cal
 sys-tem, as from
[1966] [1967] [1968] [1969] [1970]
Underfull \hbox (badness 1796) in paragraph at lines 4381--4386
[]\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over \T
1/zi4/m/it/10 write_PACKAGES \T1/ptm/m/n/10 in the \T1/zi4/m/it/10 type ==
[1971]
Underfull \hbox (badness 1838) in paragraph at lines 4455--4461
[]\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p
o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists.
 The

Underfull \hbox (badness 10000) in paragraph at lines 4455--4461
\T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in 
the pack-age are ex-am-ined to cre-ate a file
[1972] [1973] [1974]
Underfull \hbox (badness 2197) in paragraph at lines 4671--4681
[]\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][]\T1/zi4
/m/it/10 available.packages[][][]\T1/ptm/m/n/10 :
[1975]
Underfull \hbox (badness 1571) in paragraph at lines 4734--4738
[]\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down-
load speed and time spent by
[1976] [1977] [1978]) (./utils-pkg.tex
Chapter 14.
[1979]
Underfull \hbox (badness 2556) in paragraph at lines 47--52
[]\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `\T
1/zi4/m/it/10 insertions\T1/ptm/m/n/10 ',
[1980] [1981] [1982] [1983] [1984]
Underfull \hbox (badness 10000) in paragraph at lines 376--381
\T1/zi4/m/it/10 c("vertical","horizontal","cascade","minimize","restore") \T1/p
tm/m/n/10 with
[1985] [1986] [1987] [1988] [1989]
Underfull \hbox (badness 10000) in paragraph at lines 717--723
[]\T1/ptm/m/n/10 Functions \T1/zi4/m/it/10 aspell_package_Rd_files\T1/ptm/m/n/1
0 , \T1/zi4/m/it/10 aspell_package_vignettes\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3343) in paragraph at lines 717--723
\T1/zi4/m/it/10 aspell_package_R_files \T1/ptm/m/n/10 and \T1/zi4/m/it/10 aspel
l_package_C_files \T1/ptm/m/n/10 per-form spell check-ing on the
[1990] [1991]
Underfull \hbox (badness 5847) in paragraph at lines 850--856
[]\T1/ptm/m/n/10 Argument \T1/zi4/m/it/10 filters \T1/ptm/m/n/10 can be used to
 se-lect which of the pack-ages on the repos-i-to-

Underfull \hbox (badness 4229) in paragraph at lines 850--856
\T1/ptm/m/n/10 ries are re-ported. It is called with its de-fault value (\T1/zi
4/m/it/10 NULL\T1/ptm/m/n/10 ) by func-tions such as
[1992]
Underfull \hbox (badness 3861) in paragraph at lines 918--923
[]\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields \T1/zi4/m/it/10 "O
S_type"\T1/ptm/m/n/10 , \T1/zi4/m/it/10 "License"\T1/ptm/m/n/10 , \T1/zi4/m/it/
10 "License_is_FOSS"\T1/ptm/m/n/10 ,
[1993] [1994]
Underfull \hbox (badness 3323) in paragraph at lines 1089--1097
[]\T1/ptm/m/n/10 (\T1/ptm/m/it/10 deprecated\T1/ptm/m/n/10 , use \T1/zi4/m/it/1
0 bibtex = T|F \T1/ptm/m/n/10 in-stead!) a num-ber, say $\OML/cmm/m/it/10 m$\T1
/ptm/m/n/10 , in-di-cat-

Underfull \hbox (badness 2961) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 ing that the bib-tex code should be given in ad-di-tion to the f
or-mat-

Underfull \hbox (badness 3919) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 ted tex \T1/ptm/m/it/10 when \T1/ptm/m/n/10 there are not more t
han $\OML/cmm/m/it/10 m$ \T1/ptm/m/n/10 en-tries. The de-fault is

Underfull \hbox (badness 3735) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 taken as [][]\T1/zi4/m/it/10 getOption[][][]("citation.bibtex.ma
x",1) \T1/ptm/m/n/10 which is \T1/zi4/m/it/10 1 \T1/ptm/m/n/10 typ-i-cally.

Underfull \hbox (badness 1817) in paragraph at lines 1089--1097
\T1/ptm/m/n/10 For ex-am-ple, to see no bib-tex at all, you can change the de-f
ault by
[1995]
Underfull \hbox (badness 10000) in paragraph at lines 1101--1103
[]\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing
[1996] [1997]
Underfull \vbox (badness 3803) has occurred while \output is active [1998]
[1999] [2000] [2001] [2002]
Underfull \hbox (badness 1371) in paragraph at lines 1606--1608
[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/it/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/it/10 ccaddress \T1/ptm/m/n/10 to pass to
[2003]

LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 1676.

[2004] [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012]
Underfull \hbox (badness 2057) in paragraph at lines 2215--2217
[]\T1/ptm/m/n/10 None for \T1/zi4/m/it/10 chooseCRANmirror()\T1/ptm/m/n/10 , th
is func-tion is in-voked for its side ef-fect of up-dat-ing
[2013] [2014] [2015] [2016] [2017] [2018]pdfTeX warning (ext4): destination wit
h the same identifier (name{Rfn.clipboard}) has been already used, duplicate ig
nored
<to be read again> 
                   \relax 
l.2566 ... the Clipboard in MS Windows}{clipboard}
                                                   [2019] [2020]
Underfull \hbox (badness 1748) in paragraph at lines 2733--2736
[]\T1/ptm/m/n/10 A [][]\T1/zi4/m/it/10 list[][][] \T1/ptm/m/n/10 or [][]\T1/zi4
/m/it/10 array[][][]\T1/ptm/m/n/10 , see the \T1/zi4/m/it/10 simplify \T1/ptm/m
/n/10 ar-gu-ment above. In the lat-ter case, the iden-tity
[2021] [2022] [2023] [2024] [2025] [2026] [2027]
Underfull \hbox (badness 5388) in paragraph at lines 3142--3146
[]\T1/ptm/m/n/10 files end-ing `\T1/zi4/m/it/10 .tab\T1/ptm/m/n/10 ', `\T1/zi4/
m/it/10 .txt\T1/ptm/m/n/10 ' or `\T1/zi4/m/it/10 .TXT\T1/ptm/m/n/10 ' are read 
us-ing [][]\T1/zi4/m/it/10 read.table[][][](...,header =

Underfull \hbox (badness 2285) in paragraph at lines 3147--3150
[]\T1/ptm/m/n/10 files end-ing `\T1/zi4/m/it/10 .csv\T1/ptm/m/n/10 ' or `\T1/zi
4/m/it/10 .CSV\T1/ptm/m/n/10 ' are read us-ing [][]\T1/zi4/m/it/10 read.table[]
[][](...,header = TRUE,sep =
[2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] [2036] [2037] [2038]
Underfull \hbox (badness 1430) in paragraph at lines 3906--3914
[]\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by
 the \T1/zi4/m/it/10 quiet \T1/ptm/m/n/10 ar-gu-ment and the
[2039]
Underfull \hbox (badness 1231) in paragraph at lines 3983--3995
[]\T1/ptm/m/n/10 Usernames and pass-words can be set for HTTP proxy trans-fers 
via en-vi-ron-ment vari-able
[2040] [2041]
Underfull \hbox (badness 10000) in paragraph at lines 4141--4143
[]\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][]\T1/zi4/m/it/10 dow
nload.file[][][] \T1/ptm/m/n/10 and
[2042] [2043] [2044] [2045] [2046] [2047] [2048] [2049] [2050] [2051] [2052]
[2053]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.for
mat}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.4839 ...mat Unordered and Ordered Lists}{format}
                                                  pdfTeX warning (ext4): destin
ation with the same identifier (name{Rfn.format.1}) has been already used, dupl
icate ignored
<to be read again> 
                   \relax 
l.4839 ...mat Unordered and Ordered Lists}{format}
                                                   [2054] [2055] [2056]
[2057] [2058] [2059] [2060] [2061]
Underfull \hbox (badness 1622) in paragraph at lines 5358--5362
[]\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing
 to ex-ter-nal GUIs or to the
[2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071]

LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/it' instead on input line 5990.


Underfull \hbox (badness 1371) in paragraph at lines 5994--5996
[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/it/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/it/10 ccaddress \T1/ptm/m/n/10 to pass to
[2072]
Underfull \hbox (badness 1502) in paragraph at lines 6083--6088
[]\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words
'. `Key-

Underfull \hbox (badness 2103) in paragraph at lines 6083--6088
\T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are 
listed in file
[2073] [2074] [2075]
Underfull \hbox (badness 10000) in paragraph at lines 6256--6265
[]\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de
x,
[2076]
Underfull \hbox (badness 2150) in paragraph at lines 6320--6323
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion 
to search. See
[2077] [2078]
Underfull \hbox (badness 3118) in paragraph at lines 6458--6460
[]\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion `
Lock-ing' in the help for
[2079] [2080] [2081]
Underfull \hbox (badness 1325) in paragraph at lines 6630--6634
[]\T1/ptm/m/n/10 a ma-trix as re-turned by [][]\T1/zi4/m/it/10 available.packag
es[][][] \T1/ptm/m/n/10 list-ing pack-ages avail-able

Underfull \hbox (badness 4726) in paragraph at lines 6642--6648
\T1/ptm/m/n/10 used if \T1/zi4/m/it/10 repos = NULL\T1/ptm/m/n/10 . Can also be
 a char-ac-ter vec-tor, a sub-set of
[2082]
Underfull \hbox (badness 10000) in paragraph at lines 6714--6717
[]\T1/ptm/m/n/10 an op-tional char-ac-ter vec-tor of ad-di-tional op-tion(s) to
 be

Underfull \hbox (badness 10000) in paragraph at lines 6714--6717
\T1/ptm/m/n/10 passed to \T1/zi4/m/it/10 R CMD INSTALL \T1/ptm/m/n/10 for a sou
rce pack-age in-stall. E.g.,
[2083]
Underfull \hbox (badness 3219) in paragraph at lines 6790--6797
[]\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is \T1/zi4/m/it/
10 "both" \T1/ptm/m/n/10 which means `use bi-nary if avail-

Underfull \hbox (badness 5175) in paragraph at lines 6790--6797
\T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there
 are source pack-ages

Underfull \hbox (badness 1342) in paragraph at lines 6790--6797
\T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com
-piled is con-trolled by

Underfull \hbox (badness 1596) in paragraph at lines 6790--6797
[][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")\T1/
ptm/m/n/10 . \T1/zi4/m/it/10 type = "both" \T1/ptm/m/n/10 will be silently

Underfull \hbox (badness 2932) in paragraph at lines 6798--6801
[]\T1/ptm/m/n/10 Using pack-ages with \T1/zi4/m/it/10 type = "source" \T1/ptm/m
/n/10 al-ways works pro-vided the pack-age con-tains no
[2084]
Underfull \hbox (badness 10000) in paragraph at lines 6934--6939
[][][]\T1/zi4/m/it/10 update.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10
 available.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 download.packages
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 installed.packages[][][]\T1/ptm/m/n/
10 ,
[2085] [2086] [2087] [2088] [2089] [2090] [2091] [2092] [2093] [2094] [2095]
[2096] [2097] [2098] [2099] [2100] [2101] [2102] [2103] [2104] [2105] [2106]
[2107] [2108] [2109]
Underfull \hbox (badness 10000) in paragraph at lines 8434--8436
[]\T1/ptm/m/n/10 for \T1/zi4/m/it/10 asDateBuilt()\T1/ptm/m/n/10 , a [][]\T1/zi
4/m/it/10 character[][][] \T1/ptm/m/n/10 string as from

Underfull \hbox (badness 2310) in paragraph at lines 8456--8461
[]\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the
 given pack-age is found and can suc-cess-fully be read,
[2110] [2111] [2112] [2113] [2114] [2115] [2116] [2117]
Underfull \hbox (badness 1248) in paragraph at lines 8980--8984
[]\T1/zi4/m/it/10 R CMD build \T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/m/
n/10 source tar-balls. The name(s) of the pack-ages are taken from the
[2118]
Underfull \hbox (badness 1789) in paragraph at lines 9058--9060
[]\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for
 more dis-cus-sion of the
[2119] [2120] [2121] [2122] [2123] [2124] [2125] [2126] [2127] [2128] [2129]
[2130] [2131]
Underfull \hbox (badness 1097) in paragraph at lines 9895--9898
[]\T1/ptm/m/n/10 The name \T1/zi4/m/it/10 "clipboard" \T1/ptm/m/n/10 may also b
e used on Win-dows, in which case
[2132] [2133]
Underfull \hbox (badness 3000) in paragraph at lines 10031--10036
[][][]\T1/zi4/m/it/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/it/10 read.t
able[][][]\T1/ptm/m/n/10 ;
[2134] [2135] [2136] [2137] [2138] [2139] [2140] [2141] [2142]
Underfull \hbox (badness 2134) in paragraph at lines 10614--10619
[][][]\T1/zi4/m/it/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/it/10 write.
table[][][]\T1/ptm/m/n/10 ;

Underfull \hbox (badness 10000) in paragraph at lines 10670--10675
[]\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for


Underfull \hbox (badness 10000) in paragraph at lines 10670--10675
\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE\T1/ptm/m/n/10 , \T1/zi4/m/it/10 HKEY_CLASSES
_ROOT\T1/ptm/m/n/10 . \T1/zi4/m/it/10 HKEY_CURRENT_USER\T1/ptm/m/n/10 ,
[2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151]
Underfull \hbox (badness 2469) in paragraph at lines 11163--11167
[]\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia
, The Free En-cy-clo-pe-dia.

Underfull \hbox (badness 3428) in paragraph at lines 11163--11167
[][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title
 = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac-
[2152] [2153] [2154] [2155] [2156]
Underfull \hbox (badness 4060) in paragraph at lines 11494--11497
[]\T1/ptm/m/n/10 If `\T1/zi4/m/it/10 --default-packages\T1/ptm/m/n/10 ' is not 
used, then \T1/zi4/m/it/10 Rscript \T1/ptm/m/n/10 checks the en-vi-ron-ment var
i-able

Overfull \hbox (18.77168pt too wide) in paragraph at lines 11517--11517
 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr
aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] 
[2157] [2158] [2159] [2160]
Underfull \hbox (badness 2150) in paragraph at lines 11756--11758
[][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/
ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac
s / manual /
[2161] [2162] [2163] [2164]
Underfull \hbox (badness 10000) in paragraph at lines 11975--11979
[]\T1/ptm/m/n/10 The de-fault for \T1/zi4/m/it/10 stylepath \T1/ptm/m/n/10 is n
ow taken from the en-vi-ron-ment vari-able

Underfull \hbox (badness 10000) in paragraph at lines 12006--12012
[]\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y
ou can add a
[2165] [2166]
Underfull \hbox (badness 1009) in paragraph at lines 12200--12212
[]\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func-
tions can be ex-e-cuted. If
[2167]
Underfull \hbox (badness 4779) in paragraph at lines 12237--12239
[]\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure
s the R GUI (\T1/zi4/m/it/10 Rgui\T1/ptm/m/n/10 ) con-sole un-der MS Win-dows a
nd

Underfull \hbox (badness 1077) in paragraph at lines 12267--12274
\T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p
er-sonal' di-rec-tory, oth-er-wise to
[2168] [2169] [2170] [2171] [2172] [2173] [2174]
Underfull \hbox (badness 3780) in paragraph at lines 12668--12672
[]\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][]\T1
/zi4/m/it/10 options[][][]("BioC_mirror")\T1/ptm/m/n/10 , e.g. via

Underfull \hbox (badness 2635) in paragraph at lines 12684--12687
[]\T1/ptm/m/n/10 Repository `\T1/zi4/m/it/10 CRAN\T1/ptm/m/n/10 ' is treated sp
e-cially: the value is taken from the cur-rent set-ting of
[2175] [2176] [2177] [2178]
Underfull \hbox (badness 2302) in paragraph at lines 12889--12891
[]\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t
o the Win-dows API call
[2179] [2180] [2181] [2182]
Underfull \hbox (badness 10000) in paragraph at lines 13185--13190
[]\T1/ptm/m/n/10 logical; if \T1/zi4/m/it/10 TRUE \T1/ptm/m/n/10 (de-fault), []
[]\T1/zi4/m/it/10 deparse[][][](control = <S>) \T1/ptm/m/n/10 will not have

Underfull \hbox (badness 5970) in paragraph at lines 13194--13197
[]\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t
ive
[2183] [2184]
Underfull \vbox (badness 10000) has occurred while \output is active [2185]
[2186] [2187] [2188] [2189]
Underfull \hbox (badness 2932) in paragraph at lines 13614--13621
[]\T1/ptm/m/n/10 If \T1/zi4/m/it/10 syntax = NULL \T1/ptm/m/n/10 (the de-fault)
 then the avail-able syn-tax ob-jects are con-sulted in turn,

Underfull \hbox (badness 1688) in paragraph at lines 13614--13621
\T1/ptm/m/n/10 and se-lected if their \T1/zi4/m/it/10 extension \T1/ptm/m/n/10 
com-po-nent matches (as a reg-exp) the file name. Ob-
[2190] [2191] [2192] [2193] [2194]
Underfull \hbox (badness 6510) in paragraph at lines 13923--13927
[]\T1/ptm/m/n/10 When ar-gu-ment \T1/zi4/m/it/10 tar \T1/ptm/m/n/10 is set to t
he com-mand \T1/zi4/m/it/10 tar \T1/ptm/m/n/10 on ma-cOS, en-vi-ron-ment vari-a
ble

Underfull \hbox (badness 10000) in paragraph at lines 13930--13933
[][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ 
format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 http : / / pubs . opengroup .
 org /

Underfull \hbox (badness 2245) in paragraph at lines 13930--13933
\T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9
2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX
[2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204]
Underfull \hbox (badness 10000) in paragraph at lines 14594--14599
[]\T1/ptm/m/n/10 Arguments such as \T1/zi4/m/it/10 destdir \T1/ptm/m/n/10 and \
T1/zi4/m/it/10 dependencies \T1/ptm/m/n/10 to be passed to

Underfull \hbox (badness 3861) in paragraph at lines 14594--14599
[][]\T1/zi4/m/it/10 install.packages[][][] \T1/ptm/m/n/10 and \T1/zi4/m/it/10 i
gnore_repo_cache\T1/ptm/m/n/10 , \T1/zi4/m/it/10 max_repo_cache_age \T1/ptm/m/n
/10 and

Underfull \hbox (badness 1052) in paragraph at lines 14600--14602
[]\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and
 in-stall. See
[2205]
Underfull \hbox (badness 10000) in paragraph at lines 14659--14662
[][][]\T1/zi4/m/it/10 install.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/1
0 available.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 download.package
s[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/it/10 installed.packages[][][]\T1/ptm/m/n
/10 ,
[2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] [2214] [2215] [2216]
[2217]
Underfull \hbox (badness 10000) in paragraph at lines 15432--15434
[]\T1/ptm/m/n/10 To write a Unix-style file on Win-dows, use a bi-nary con-nec-
tion e.g. \T1/zi4/m/it/10 file =
[2218] [2219] [2220] [2221]) [2222] (./fullrefman.ind [2223] [2224] [2225]
[2226] [2227] [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236]
[2237] [2238] [2239] [2240] [2241] [2242] [2243] [2244] [2245] [2246] [2247]
[2248] [2249] [2250] [2251] [2252] [2253] [2254] [2255] [2256] [2257] [2258]
[2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] [2267] [2268] [2269]
[2270] [2271] [2272]
Overfull \hbox (33.3567pt too wide) in paragraph at lines 8871--8873
[]\T1/zi4/m/it/10 package_native_routine_registration_skeleton\T1/ptm/m/n/10 , 

[2273] [2274] [2275] [2276] [2277] [2278]
Overfull \hbox (20.8567pt too wide) in paragraph at lines 10190--10192
[]\T1/zi4/m/it/10 R_AVAILABLE_PACKAGES_CACHE_CONTROL_MAX_AGE 
[2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286]
Overfull \hbox (5.8567pt too wide) in paragraph at lines 11936--11938
[]\T1/zi4/m/it/10 summarize_check_packages_in_dir_depends 

Overfull \hbox (5.8567pt too wide) in paragraph at lines 11938--11940
[]\T1/zi4/m/it/10 summarize_check_packages_in_dir_results 

Overfull \hbox (5.8567pt too wide) in paragraph at lines 11940--11942
[]\T1/zi4/m/it/10 summarize_check_packages_in_dir_timings 
[2287] [2288] [2289] [2290] [2291] [2292] [2293] [2294] [2295])
(./fullrefman.aux)

LaTeX Font Warning: Some font shapes were not available, defaults substituted.

 )
(see the transcript file for additional information)pdfTeX warning (dest): name
{Rfn.write.matrix} has been referenced but does not exist, replaced by a fixed 
one

pdfTeX warning (dest): name{Rfn.lmList} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dgTMatrix} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.glht} has been referenced but does not exist, r
eplaced by a fixed one

pdfTeX warning (dest): name{Rfn.survreg} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.coxph} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.stepAIC} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rinvGauss} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.gamma.shape} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.profile.glm} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cov.mcd} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cov.mve} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.Insurance} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.sparse.model.matrix} has been referenced but do
es not exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.lqs} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.logLik.lme} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.logLik.gls} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.lmrob} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rlm} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.wilcox.Rul.test} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.loglm} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.nlsList} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.daisy} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.spearman.test} has been referenced but does not
 exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.pSpearman} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.pKendall} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.Kendall} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cor.fk} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dMatrix} has been referenced but does not exist
, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dgCMatrix} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.confint.nls} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.confint.glm} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.sammon} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.isoMDS} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.width.SJ} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.bcv} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.ucv} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.bandwidth.nrd} has been referenced but does not
 exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.agnes} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.diana} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.lme} has been referenced but does not exist, re
placed by a fixed one

pdfTeX warning (dest): name{Rfn.ansari.Rul.test} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rpart} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.sparseMatrix} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.showDefault} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getGroupMembers} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.resetGeneric} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.linearizeMlist} has been referenced but does no
t exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getGeneric} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getMethodsForDispatch} has been referenced but 
does not exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.setDataPart} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getDataPart} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.rBind} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.cBind} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.possibleExtends} has been referenced but does n
ot exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.panel.identify} has been referenced but does no
t exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.trellis.focus} has been referenced but does not
 exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.mosaic} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.levelplot} has been referenced but does not exi
st, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.contourplot} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.assoc} has been referenced but does not exist, 
replaced by a fixed one

pdfTeX warning (dest): name{Rfn.dpih} has been referenced but does not exist, r
eplaced by a fixed one

pdfTeX warning (dest): name{Rfn.truehist} has been referenced but does not exis
t, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.bkde2D} has been referenced but does not exist,
 replaced by a fixed one

pdfTeX warning (dest): name{Rfn.which.is.max} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.getNamespace} has been referenced but does not 
exist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.asNamespace} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.formalArgs} has been referenced but does not ex
ist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.isRematched} has been referenced but does not e
xist, replaced by a fixed one

pdfTeX warning (dest): name{Rfn.chron} has been referenced but does not exist, 
replaced by a fixed one

{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc} </tmp/texfonts/pk/l
jfour/jknappen/ec/tctt1000.600pk> </tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900
.600pk>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}{/
usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-t1-0.enc}</usr/shar
e/texlive/texmf-dist/fonts/type1/public/inconsolata/Inconsolata-zi4b.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/inconsolata/Inconsolata-zi4r.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cmextra/cmbsy7.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmbx10.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb></usr/share/tex
live/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/t
exmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/font
s/type1/public/amsfonts/cm/cmmib10.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmr5.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfo
nts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/c
msy10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy5.p
fb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy7.pfb></us
r/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/
fonts/type1/urw/times/utmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/ur
w/times/utmr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.
pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on fullrefman.pdf (2326 pages, 6266432 bytes).
Transcript written on fullrefman.log.
TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-FAQ.texi
@setfilename R-FAQ.info
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.
texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
(/usr/share/texmf/tex/texinfo/txi-en.tex) [1{/var/lib/texmf/fonts/map/pdftex/up
dmap/pdftex.map}] [-1] Chapter 1
Cross reference values unknown; you must run TeX again. [1] Chapter 2 [2]
[3] [4] [5] [6] [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16]
[17] [18] Chapter 4 [19] Chapter 5 [20] [21] [22] [23] [24] Chapter 6 [25]
[26] Chapter 7 [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38]
Writing index file R-FAQ.fn
[39] [40] [41]
Underfull \hbox (badness 10000) in paragraph at lines 3271--3279
@texttt download.file()[] @textrm func-tion), a down-load method is cho-sen bas
ed on the
[42] Chapter 8 [43] Chapter 9 [44] [45] Chapter 10 [46] [47] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmcsc10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/a
msfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfont
s/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/c
mmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pf
b></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/te
xlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texm
f-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf-dist/fonts
/type1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf-dist/fonts/type1
/public/amsfonts/cm/cmtt12.pfb></usr/share/texlive/texmf-dist/fonts/type1/publi
c/amsfonts/cm/cmtt9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfo
nts/latxfont/lcircle1.pfb>
Output written on R-FAQ.pdf (49 pages, 357795 bytes).
Transcript written on R-FAQ.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.
texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
(/usr/share/texmf/tex/texinfo/txi-en.tex) [1{/var/lib/texmf/fonts/map/pdftex/up
dmap/pdftex.map}]
(/<<PKGBUILDDIR>>/doc/manual/R-FAQ.toc [-1] [-2])
[-3] (/<<PKGBUILDDIR>>/doc/manual/R-FAQ.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-FAQ.toc) Chapter 1
(/<<PKGBUILDDIR>>/doc/manual/R-FAQ.aux) [1]
Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] Chapter 3 [10] [11] [12] [13]
[14] [15] [16] [17] [18] Chapter 4 [19] Chapter 5 [20] [21] [22] [23] [24]
Chapter 6 [25] [26] Chapter 7 [27] [28] [29] [30] [31] [32] [33] [34] [35]
[36] [37] [38]
Writing index file R-FAQ.fn
[39] [40] [41]
Underfull \hbox (badness 10000) in paragraph at lines 3271--3279
@texttt download.file()[] @textrm func-tion), a down-load method is cho-sen bas
ed on the
[42] Chapter 8 [43] Chapter 9 [44] [45] Chapter 10 [46] [47] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmcsc10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/a
msfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfont
s/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/c
mmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pf
b></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/te
xlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texm
f-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf-dist/fonts
/type1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf-dist/fonts/type1
/public/amsfonts/cm/cmtt12.pfb></usr/share/texlive/texmf-dist/fonts/type1/publi
c/amsfonts/cm/cmtt9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfo
nts/latxfont/lcircle1.pfb>
Output written on R-FAQ.pdf (51 pages, 374487 bytes).
Transcript written on R-FAQ.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.
texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
(/usr/share/texmf/tex/texinfo/txi-en.tex) [1{/var/lib/texmf/fonts/map/pdftex/up
dmap/pdftex.map}]
(/<<PKGBUILDDIR>>/doc/manual/R-FAQ.toc [-1] [-2])
[-3] (/<<PKGBUILDDIR>>/doc/manual/R-FAQ.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-FAQ.toc) Chapter 1
(/<<PKGBUILDDIR>>/doc/manual/R-FAQ.aux) [1]
Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] Chapter 3 [10] [11] [12] [13]
[14] [15] [16] [17] [18] Chapter 4 [19] Chapter 5 [20] [21] [22] [23] [24]
Chapter 6 [25] [26] Chapter 7 [27] [28] [29] [30] [31] [32] [33] [34] [35]
[36] [37] [38]
Writing index file R-FAQ.fn
[39] [40] [41]
Underfull \hbox (badness 10000) in paragraph at lines 3271--3279
@texttt download.file()[] @textrm func-tion), a down-load method is cho-sen bas
ed on the
[42] Chapter 8 [43] Chapter 9 [44] [45] Chapter 10 [46] [47] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmcsc10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/a
msfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfont
s/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/c
mmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pf
b></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/te
xlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texm
f-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf-dist/fonts
/type1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf-dist/fonts/type1
/public/amsfonts/cm/cmtt12.pfb></usr/share/texlive/texmf-dist/fonts/type1/publi
c/amsfonts/cm/cmtt9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfo
nts/latxfont/lcircle1.pfb>
Output written on R-FAQ.pdf (51 pages, 374487 bytes).
Transcript written on R-FAQ.log.
TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-admin.texi
@setfilename R-admin.info
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-admin.t2d/pdf/xtr/R-ad
min.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-admin.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1
Writing index file R-admin.cp
Writing index file R-admin.en
[1] Chapter 2 [2] Cross reference values unknown; you must run TeX again.
[3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15] [16]
[17] [18] [19] [20] [21] Chapter 4 [22] [23]
Underfull \hbox (badness 10000) in paragraph at lines 1963--1975
@texttt capitan.fw.pkg[]@textrm , @texttt org.r-project.R.el-capitan.GUI.pkg[]@
textrm , @texttt org.r-project.x86_
[24] Chapter 5 [25] Chapter 6 [26]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 2113--2113
 []@texttt [1] "datasets"  "utils"     "grDevices" "graphics"  "stats"     "met
hods"[] 
[27] [28]
Underfull \hbox (badness 6842) in paragraph at lines 2307--2318
[]@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age
s. No ad-di-
[29] [30] [31] [32] [33] [34]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 2783--2783
 []@texttt R --arch @textttsl arch @texttt CMD check -l @textttsl lib-dir @text
tt --extra-arch --install=check:@textttsl pkg@texttt .log @textttsl pkg[] 
[35]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 2803--2803
 []@texttt .../bin/i386/Rcmd check -l @textttsl lib-dir @texttt --extra-arch --
install=check:@textttsl pkg@texttt .log @textttsl pkg[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 2804--2804
 []@texttt .../bin/x64/Rcmd check -l @textttsl lib-dir @texttt --extra-arch --i
nstall=check:@textttsl pkg@texttt .log @textttsl pkg[] 
Chapter 7 [36] [37] [38] Chapter 8 [39] Chapter 9 [40] [41] [42] [43]
Appendix A [44] [45]
Overfull \hbox (49.43388pt too wide) in paragraph at lines 3437--3437
 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit --
disable-cpp[] 
[46] [47] [48] [49]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 3708--3708
 []@texttt JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.212.b04-0.fc30.x86_6
4/jre[] 
[50] [51] [52] [53] [54] [55] [56] Appendix B [57] [58] [59] [60] [61] [62]
Appendix C [63] [64] [65] [66]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 4981--4981
 []@texttt -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSER
TIONS[] 
[67] [68]
Overfull \hbox (36.62297pt too wide) in paragraph at lines 5171--5171
 []@texttt curl -OL https://mac.r-project.org/libs/pcre-8.40-darwin.15-x86_64.t
ar.gz[] 

Overfull \hbox (30.87428pt too wide) in paragraph at lines 5173--5173
 []@texttt curl -OL https://mac.r-project.org/libs/xz-5.2.3-darwin.15-x86_64.ta
r.gz[] 

Underfull \hbox (badness 6995) in paragraph at lines 5180--5183
 []@textrm GNU @texttt readline[] @textrm from [][]@texttt https://  mac.  R-pr
oject.  org/  libs[][][]@textrm , or con-fig-ure with
[69]
Overfull \hbox (128.60197pt too wide) in paragraph at lines 5216--5216
 []@texttt export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconf
ig:/usr/lib/pkgconfig[] 

Overfull \hbox (66.67995pt too wide) in paragraph at lines 5248--5248
 []@texttt PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconfig:/usr
/lib/pkgconfig[] 

Overfull \hbox (43.51776pt too wide) in paragraph at lines 5265--5266
[][][]@smallrm See [][]@smalltt https://  developer.  apple.  com//  documentat
ion/  xcode/  notarizing_macos_software_before_distribution[][][]@smallrm .| 
[70]
Overfull \hbox (78.17732pt too wide) in paragraph at lines 5317--5317
 []@texttt /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_m
acOS_10.14.pkg \[] 

Overfull \hbox (135.6642pt too wide) in paragraph at lines 5326--5326
 []@texttt CC="/usr/local/clang7/bin/clang -isysroot /Library/Developer/Command
LineTools/SDKs/MacOSX.sdk"[] 

Overfull \hbox (152.91026pt too wide) in paragraph at lines 5327--5327
 []@texttt CXX="/usr/local/clang7/bin/clang++ -isysroot /Library/Developer/Comm
andLineTools/SDKs/MacOSX.sdk"[] 
[71]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 5371--5371
 []@texttt --enable-memory-profiling --enable-R-framework --x-libraries=/opt/X1
1/lib[] 
[72]
Underfull \hbox (badness 10000) in paragraph at lines 5474--5479
[]@textrm To see what com-pat-i-ble ver-sions of Java are cur-rently in-stalled
, run
[73]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 5498--5498
 []@texttt JAVA_HOME=/Library/Java/JavaVirtualMachines/jdk1.8.0_191.jdk/Content
s/Home[] 
[74] [75]
Overfull \hbox (32.18782pt too wide) in paragraph at lines 5666--5666
 []@texttt R_LD_LIBRARY_PATH="/opt/developerstudio12.6/lib:/usr/local/lib:/opt/
csw/lib"[] 
[76]
Underfull \hbox (badness 10000) in paragraph at lines 5755--5761
@texttt LDFLAGS=-L/usr/local/lib/amd64[] @textrm or @texttt LDFLAGS=-L/usr/loca
l/lib/sparcv9[] @textrm as

Overfull \hbox (141.41289pt too wide) in paragraph at lines 5763--5763
 []@texttt PKG_CONFIG_PATH= /usr/local/lib/amd64/pkgconfig:/opt/csw/lib/64/pkgc
onfig:/usr/lib/64/pkgconfig[] 

Overfull \hbox (26.43913pt too wide) in paragraph at lines 5770--5770
 []@texttt JAVA_CPPFLAGS="-I${JAVA_HOME}/../include -I${JAVA_HOME}/../include/s
olaris"[] 
[77]
Underfull \hbox (badness 10000) in paragraph at lines 5820--5824
[]@textrm Note that paths such as @texttt /opt/csw/lib[]@textrm , @texttt /usr/
local/lib/amd64[] @textrm and
[78] Appendix D [79] [80] [81] (Function and variable index) [82]
No file R-admin.vrs.
(Concept index) [83]
No file R-admin.cps.
(Environment variable index) [84]
No file R-admin.ens.
[85] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmcsc10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmr8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.p
fb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/s
hare/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/cm/cmti9.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf-dist/f
onts/type1/public/amsfonts/cm/cmtt12.pfb></usr/share/texlive/texmf-dist/fonts/t
ype1/public/amsfonts/cm/cmtt9.pfb>
Output written on R-admin.pdf (88 pages, 482957 bytes).
Transcript written on R-admin.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-admin.t2d/pdf/xtr/R-ad
min.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-admin.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-admin.toc [-1]
[-2]) [-3] [-4]
(/<<PKGBUILDDIR>>/doc/manual/R-admin.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-admin.toc) Chapter 1
(/<<PKGBUILDDIR>>/doc/manual/R-admin.aux)
Writing index file R-admin.cp
Writing index file R-admin.en
[1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14]
Chapter 3 [15] [16] [17] [18] [19] [20] [21] Chapter 4 [22] [23]
Underfull \hbox (badness 10000) in paragraph at lines 1963--1975
@texttt capitan.fw.pkg[]@textrm , @texttt org.r-project.R.el-capitan.GUI.pkg[]@
textrm , @texttt org.r-project.x86_
[24] Chapter 5 [25] Chapter 6 [26]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 2113--2113
 []@texttt [1] "datasets"  "utils"     "grDevices" "graphics"  "stats"     "met
hods"[] 
[27] [28]
Underfull \hbox (badness 6842) in paragraph at lines 2307--2318
[]@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age
s. No ad-di-
[29] [30] [31] [32] [33] [34]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 2783--2783
 []@texttt R --arch @textttsl arch @texttt CMD check -l @textttsl lib-dir @text
tt --extra-arch --install=check:@textttsl pkg@texttt .log @textttsl pkg[] 
[35]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 2803--2803
 []@texttt .../bin/i386/Rcmd check -l @textttsl lib-dir @texttt --extra-arch --
install=check:@textttsl pkg@texttt .log @textttsl pkg[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 2804--2804
 []@texttt .../bin/x64/Rcmd check -l @textttsl lib-dir @texttt --extra-arch --i
nstall=check:@textttsl pkg@texttt .log @textttsl pkg[] 
Chapter 7 [36] [37] [38] Chapter 8 [39] Chapter 9 [40] [41] [42] [43]
Appendix A [44] [45]
Overfull \hbox (49.43388pt too wide) in paragraph at lines 3437--3437
 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit --
disable-cpp[] 
[46] [47] [48] [49]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 3708--3708
 []@texttt JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.212.b04-0.fc30.x86_6
4/jre[] 
[50] [51] [52] [53] [54] [55] [56] Appendix B [57] [58] [59] [60] [61] [62]
Appendix C [63] [64] [65] [66]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 4981--4981
 []@texttt -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSER
TIONS[] 
[67] [68]
Overfull \hbox (36.62297pt too wide) in paragraph at lines 5171--5171
 []@texttt curl -OL https://mac.r-project.org/libs/pcre-8.40-darwin.15-x86_64.t
ar.gz[] 

Overfull \hbox (30.87428pt too wide) in paragraph at lines 5173--5173
 []@texttt curl -OL https://mac.r-project.org/libs/xz-5.2.3-darwin.15-x86_64.ta
r.gz[] 

Underfull \hbox (badness 6995) in paragraph at lines 5180--5183
 []@textrm GNU @texttt readline[] @textrm from [][]@texttt https://  mac.  R-pr
oject.  org/  libs[][][]@textrm , or con-fig-ure with
[69]
Overfull \hbox (128.60197pt too wide) in paragraph at lines 5216--5216
 []@texttt export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconf
ig:/usr/lib/pkgconfig[] 

Overfull \hbox (66.67995pt too wide) in paragraph at lines 5248--5248
 []@texttt PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconfig:/usr
/lib/pkgconfig[] 

Overfull \hbox (43.51776pt too wide) in paragraph at lines 5265--5266
[][][]@smallrm See [][]@smalltt https://  developer.  apple.  com//  documentat
ion/  xcode/  notarizing_macos_software_before_distribution[][][]@smallrm .| 
[70]
Overfull \hbox (78.17732pt too wide) in paragraph at lines 5317--5317
 []@texttt /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_m
acOS_10.14.pkg \[] 

Overfull \hbox (135.6642pt too wide) in paragraph at lines 5326--5326
 []@texttt CC="/usr/local/clang7/bin/clang -isysroot /Library/Developer/Command
LineTools/SDKs/MacOSX.sdk"[] 

Overfull \hbox (152.91026pt too wide) in paragraph at lines 5327--5327
 []@texttt CXX="/usr/local/clang7/bin/clang++ -isysroot /Library/Developer/Comm
andLineTools/SDKs/MacOSX.sdk"[] 
[71]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 5371--5371
 []@texttt --enable-memory-profiling --enable-R-framework --x-libraries=/opt/X1
1/lib[] 
[72]
Underfull \hbox (badness 10000) in paragraph at lines 5474--5479
[]@textrm To see what com-pat-i-ble ver-sions of Java are cur-rently in-stalled
, run
[73]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 5498--5498
 []@texttt JAVA_HOME=/Library/Java/JavaVirtualMachines/jdk1.8.0_191.jdk/Content
s/Home[] 
[74] [75]
Overfull \hbox (32.18782pt too wide) in paragraph at lines 5666--5666
 []@texttt R_LD_LIBRARY_PATH="/opt/developerstudio12.6/lib:/usr/local/lib:/opt/
csw/lib"[] 
[76]
Underfull \hbox (badness 10000) in paragraph at lines 5755--5761
@texttt LDFLAGS=-L/usr/local/lib/amd64[] @textrm or @texttt LDFLAGS=-L/usr/loca
l/lib/sparcv9[] @textrm as

Overfull \hbox (141.41289pt too wide) in paragraph at lines 5763--5763
 []@texttt PKG_CONFIG_PATH= /usr/local/lib/amd64/pkgconfig:/opt/csw/lib/64/pkgc
onfig:/usr/lib/64/pkgconfig[] 

Overfull \hbox (26.43913pt too wide) in paragraph at lines 5770--5770
 []@texttt JAVA_CPPFLAGS="-I${JAVA_HOME}/../include -I${JAVA_HOME}/../include/s
olaris"[] 
[77]
Underfull \hbox (badness 10000) in paragraph at lines 5820--5824
[]@textrm Note that paths such as @texttt /opt/csw/lib[]@textrm , @texttt /usr/
local/lib/amd64[] @textrm and
[78] Appendix D [79] [80] [81] (Function and variable index) [82]
(/<<PKGBUILDDIR>>/doc/manual/R-admin.vrs)
(Concept index) [83]
(/<<PKGBUILDDIR>>/doc/manual/R-admin.cps)
(Environment variable index) [84]
(/<<PKGBUILDDIR>>/doc/manual/R-admin.ens) [85] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmcsc10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/a
msfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfont
s/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cm
r10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/sh
are/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texlive/te
xmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist/f
onts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf-dist/fonts/t
ype1/public/amsfonts/cm/cmti9.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/a
msfonts/cm/cmtt12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfont
s/cm/cmtt9.pfb>
Output written on R-admin.pdf (91 pages, 529015 bytes).
Transcript written on R-admin.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-admin.t2d/pdf/xtr/R-ad
min.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-admin.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-admin.toc [-1]
[-2]) [-3] [-4]
(/<<PKGBUILDDIR>>/doc/manual/R-admin.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-admin.toc) Chapter 1
(/<<PKGBUILDDIR>>/doc/manual/R-admin.aux)
Writing index file R-admin.cp
Writing index file R-admin.en
[1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14]
Chapter 3 [15] [16] [17] [18] [19] [20] [21] Chapter 4 [22] [23]
Underfull \hbox (badness 10000) in paragraph at lines 1963--1975
@texttt capitan.fw.pkg[]@textrm , @texttt org.r-project.R.el-capitan.GUI.pkg[]@
textrm , @texttt org.r-project.x86_
[24] Chapter 5 [25] Chapter 6 [26]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 2113--2113
 []@texttt [1] "datasets"  "utils"     "grDevices" "graphics"  "stats"     "met
hods"[] 
[27] [28]
Underfull \hbox (badness 6842) in paragraph at lines 2307--2318
[]@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age
s. No ad-di-
[29] [30] [31] [32] [33] [34]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 2783--2783
 []@texttt R --arch @textttsl arch @texttt CMD check -l @textttsl lib-dir @text
tt --extra-arch --install=check:@textttsl pkg@texttt .log @textttsl pkg[] 
[35]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 2803--2803
 []@texttt .../bin/i386/Rcmd check -l @textttsl lib-dir @texttt --extra-arch --
install=check:@textttsl pkg@texttt .log @textttsl pkg[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 2804--2804
 []@texttt .../bin/x64/Rcmd check -l @textttsl lib-dir @texttt --extra-arch --i
nstall=check:@textttsl pkg@texttt .log @textttsl pkg[] 
Chapter 7 [36] [37] [38] Chapter 8 [39] Chapter 9 [40] [41] [42] [43]
Appendix A [44] [45]
Overfull \hbox (49.43388pt too wide) in paragraph at lines 3437--3437
 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit --
disable-cpp[] 
[46] [47] [48] [49]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 3708--3708
 []@texttt JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.212.b04-0.fc30.x86_6
4/jre[] 
[50] [51] [52] [53] [54] [55] [56] Appendix B [57] [58] [59] [60] [61] [62]
Appendix C [63] [64] [65] [66]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 4981--4981
 []@texttt -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSER
TIONS[] 
[67] [68]
Overfull \hbox (36.62297pt too wide) in paragraph at lines 5171--5171
 []@texttt curl -OL https://mac.r-project.org/libs/pcre-8.40-darwin.15-x86_64.t
ar.gz[] 

Overfull \hbox (30.87428pt too wide) in paragraph at lines 5173--5173
 []@texttt curl -OL https://mac.r-project.org/libs/xz-5.2.3-darwin.15-x86_64.ta
r.gz[] 

Underfull \hbox (badness 6995) in paragraph at lines 5180--5183
 []@textrm GNU @texttt readline[] @textrm from [][]@texttt https://  mac.  R-pr
oject.  org/  libs[][][]@textrm , or con-fig-ure with
[69]
Overfull \hbox (128.60197pt too wide) in paragraph at lines 5216--5216
 []@texttt export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconf
ig:/usr/lib/pkgconfig[] 

Overfull \hbox (66.67995pt too wide) in paragraph at lines 5248--5248
 []@texttt PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconfig:/usr
/lib/pkgconfig[] 

Overfull \hbox (43.51776pt too wide) in paragraph at lines 5265--5266
[][][]@smallrm See [][]@smalltt https://  developer.  apple.  com//  documentat
ion/  xcode/  notarizing_macos_software_before_distribution[][][]@smallrm .| 
[70]
Overfull \hbox (78.17732pt too wide) in paragraph at lines 5317--5317
 []@texttt /Library/Developer/CommandLineTools/Packages/macOS_SDK_headers_for_m
acOS_10.14.pkg \[] 

Overfull \hbox (135.6642pt too wide) in paragraph at lines 5326--5326
 []@texttt CC="/usr/local/clang7/bin/clang -isysroot /Library/Developer/Command
LineTools/SDKs/MacOSX.sdk"[] 

Overfull \hbox (152.91026pt too wide) in paragraph at lines 5327--5327
 []@texttt CXX="/usr/local/clang7/bin/clang++ -isysroot /Library/Developer/Comm
andLineTools/SDKs/MacOSX.sdk"[] 
[71]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 5371--5371
 []@texttt --enable-memory-profiling --enable-R-framework --x-libraries=/opt/X1
1/lib[] 
[72]
Underfull \hbox (badness 10000) in paragraph at lines 5474--5479
[]@textrm To see what com-pat-i-ble ver-sions of Java are cur-rently in-stalled
, run
[73]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 5498--5498
 []@texttt JAVA_HOME=/Library/Java/JavaVirtualMachines/jdk1.8.0_191.jdk/Content
s/Home[] 
[74] [75]
Overfull \hbox (32.18782pt too wide) in paragraph at lines 5666--5666
 []@texttt R_LD_LIBRARY_PATH="/opt/developerstudio12.6/lib:/usr/local/lib:/opt/
csw/lib"[] 
[76]
Underfull \hbox (badness 10000) in paragraph at lines 5755--5761
@texttt LDFLAGS=-L/usr/local/lib/amd64[] @textrm or @texttt LDFLAGS=-L/usr/loca
l/lib/sparcv9[] @textrm as

Overfull \hbox (141.41289pt too wide) in paragraph at lines 5763--5763
 []@texttt PKG_CONFIG_PATH= /usr/local/lib/amd64/pkgconfig:/opt/csw/lib/64/pkgc
onfig:/usr/lib/64/pkgconfig[] 

Overfull \hbox (26.43913pt too wide) in paragraph at lines 5770--5770
 []@texttt JAVA_CPPFLAGS="-I${JAVA_HOME}/../include -I${JAVA_HOME}/../include/s
olaris"[] 
[77]
Underfull \hbox (badness 10000) in paragraph at lines 5820--5824
[]@textrm Note that paths such as @texttt /opt/csw/lib[]@textrm , @texttt /usr/
local/lib/amd64[] @textrm and
[78] Appendix D [79] [80] [81] (Function and variable index) [82]
(/<<PKGBUILDDIR>>/doc/manual/R-admin.vrs)
(Concept index) [83]
(/<<PKGBUILDDIR>>/doc/manual/R-admin.cps)
(Environment variable index) [84]
(/<<PKGBUILDDIR>>/doc/manual/R-admin.ens) [85] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmcsc10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/a
msfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfont
s/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cm
r10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/sh
are/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texlive/te
xmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist/f
onts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf-dist/fonts/t
ype1/public/amsfonts/cm/cmti9.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/a
msfonts/cm/cmtt12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfont
s/cm/cmtt9.pfb>
Output written on R-admin.pdf (91 pages, 528971 bytes).
Transcript written on R-admin.log.
TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-data.texi
@setfilename R-data.info
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-data.t2d/pdf/xtr/R-dat
a.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-data.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements)
Underfull \hbox (badness 10000) in paragraph at lines 87--87
 [][]@textbf DBI

Overfull \hbox (4.50087pt too wide) in paragraph at lines 87--87
 @texttt package=DBI[]@textrm )[][]| 

Overfull \hbox (8.53186pt too wide) in paragraph at lines 88--88
 [][]@textbf dataframes2xls

Overfull \hbox (67.73643pt too wide) in paragraph at lines 88--88
 @texttt package=dataframes2xls[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 89--89
 [][]@textbf foreign

Overfull \hbox (27.49562pt too wide) in paragraph at lines 89--89
 @texttt package=foreign[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 90--90
 [][]@textbf gdata

Overfull \hbox (15.99825pt too wide) in paragraph at lines 90--90
 @texttt package=gdata[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 91--91
 [][]@textbf ncdf4

Overfull \hbox (15.99825pt too wide) in paragraph at lines 91--91
 @texttt package=ncdf4[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 92--92
 [][]@textbf rJava

Overfull \hbox (15.99825pt too wide) in paragraph at lines 92--92
 @texttt package=rJava[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 93--93
 [][]@textbf RJDBC

Overfull \hbox (15.99825pt too wide) in paragraph at lines 93--93
 @texttt package=RJDBC[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 94--94
 [][]@textbf RMySQL

Overfull \hbox (21.74693pt too wide) in paragraph at lines 94--94
 @texttt package=RMySQL[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 95--95
 [][]@textbf RNetCDF

Overfull \hbox (27.49562pt too wide) in paragraph at lines 95--95
 @texttt package=RNetCDF[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 96--96
 [][]@textbf RODBC

Overfull \hbox (15.99825pt too wide) in paragraph at lines 96--96
 @texttt package=RODBC[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 97--97
 [][]@textbf ROracle

Overfull \hbox (27.49562pt too wide) in paragraph at lines 97--97
 @texttt package=ROracle[]@textrm )[][]| 

Overfull \hbox (2.70708pt too wide) in paragraph at lines 98--98
 [][]@textbf RPostgreSQL

Overfull \hbox (50.49037pt too wide) in paragraph at lines 98--98
 @texttt package=RPostgreSQL[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 101--101
 [][]@textbf RSQLite

Overfull \hbox (27.49562pt too wide) in paragraph at lines 101--101
 @texttt package=RSQLite[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 103--103
 [][]@textbf WriteXLS

Overfull \hbox (33.24431pt too wide) in paragraph at lines 103--103
 @texttt package=WriteXLS[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 104--104
 [][]@textbf XLConnect

Overfull \hbox (38.993pt too wide) in paragraph at lines 104--104
 @texttt package=XLConnect[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 105--105
 [][]@textbf XML

Overfull \hbox (4.50087pt too wide) in paragraph at lines 105--105
 @texttt package=XML[]@textrm )[][]| 
[1] [2] Chapter 1 [3]
Writing index file R-data.cp
Cross reference values unknown; you must run TeX again. [4] [5] [6] [7]
Chapter 2 [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15] [16] Chapter 4
[17] [18] [19] [20] [21] [22] [23] Chapter 5 [24]
Underfull \hbox (badness 10000) in paragraph at lines 1755--1761
[]@textrm Packages [][]@textbf h5 @textrm (@texttt https://  CRAN.  R-project. 
 org/  package=h5[]@textrm )[][], Bio-con-duc-tor's @textbf rhdf5@textrm ,
Chapter 6 [25] Chapter 7 [26] [27] [28] [29] [30] Chapter 8 [31] Chapter 9
[32] Appendix A [33] (Function and variable index) [34]
No file R-data.vrs.
(Concept index) [35]
No file R-data.cps.
[36] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm
/cmr9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt1
0.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/share/
texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt12.pfb></usr/share/texliv
e/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb>
Output written on R-data.pdf (39 pages, 271839 bytes).
Transcript written on R-data.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-data.t2d/pdf/xtr/R-dat
a.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-data.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-data.toc [-1])
[-2] (/<<PKGBUILDDIR>>/doc/manual/R-data.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-data.toc)
(Acknowledgements)
(/<<PKGBUILDDIR>>/doc/manual/R-data.aux)
Underfull \hbox (badness 10000) in paragraph at lines 87--87
 [][]@textbf DBI

Overfull \hbox (4.50087pt too wide) in paragraph at lines 87--87
 @texttt package=DBI[]@textrm )[][]| 

Overfull \hbox (8.53186pt too wide) in paragraph at lines 88--88
 [][]@textbf dataframes2xls

Overfull \hbox (67.73643pt too wide) in paragraph at lines 88--88
 @texttt package=dataframes2xls[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 89--89
 [][]@textbf foreign

Overfull \hbox (27.49562pt too wide) in paragraph at lines 89--89
 @texttt package=foreign[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 90--90
 [][]@textbf gdata

Overfull \hbox (15.99825pt too wide) in paragraph at lines 90--90
 @texttt package=gdata[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 91--91
 [][]@textbf ncdf4

Overfull \hbox (15.99825pt too wide) in paragraph at lines 91--91
 @texttt package=ncdf4[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 92--92
 [][]@textbf rJava

Overfull \hbox (15.99825pt too wide) in paragraph at lines 92--92
 @texttt package=rJava[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 93--93
 [][]@textbf RJDBC

Overfull \hbox (15.99825pt too wide) in paragraph at lines 93--93
 @texttt package=RJDBC[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 94--94
 [][]@textbf RMySQL

Overfull \hbox (21.74693pt too wide) in paragraph at lines 94--94
 @texttt package=RMySQL[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 95--95
 [][]@textbf RNetCDF

Overfull \hbox (27.49562pt too wide) in paragraph at lines 95--95
 @texttt package=RNetCDF[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 96--96
 [][]@textbf RODBC

Overfull \hbox (15.99825pt too wide) in paragraph at lines 96--96
 @texttt package=RODBC[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 97--97
 [][]@textbf ROracle

Overfull \hbox (27.49562pt too wide) in paragraph at lines 97--97
 @texttt package=ROracle[]@textrm )[][]| 

Overfull \hbox (2.70708pt too wide) in paragraph at lines 98--98
 [][]@textbf RPostgreSQL

Overfull \hbox (50.49037pt too wide) in paragraph at lines 98--98
 @texttt package=RPostgreSQL[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 101--101
 [][]@textbf RSQLite

Overfull \hbox (27.49562pt too wide) in paragraph at lines 101--101
 @texttt package=RSQLite[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 103--103
 [][]@textbf WriteXLS

Overfull \hbox (33.24431pt too wide) in paragraph at lines 103--103
 @texttt package=WriteXLS[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 104--104
 [][]@textbf XLConnect

Overfull \hbox (38.993pt too wide) in paragraph at lines 104--104
 @texttt package=XLConnect[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 105--105
 [][]@textbf XML

Overfull \hbox (4.50087pt too wide) in paragraph at lines 105--105
 @texttt package=XML[]@textrm )[][]| 
[1] [2] Chapter 1 [3]
Writing index file R-data.cp
[4] [5] [6] [7] Chapter 2 [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15]
[16] Chapter 4 [17] [18] [19] [20] [21] [22] [23] Chapter 5 [24]
Underfull \hbox (badness 10000) in paragraph at lines 1755--1761
[]@textrm Packages [][]@textbf h5 @textrm (@texttt https://  CRAN.  R-project. 
 org/  package=h5[]@textrm )[][], Bio-con-duc-tor's @textbf rhdf5@textrm ,
Chapter 6 [25] Chapter 7 [26] [27] [28] [29] [30] Chapter 8 [31] Chapter 9
[32] Appendix A [33] (Function and variable index) [34]
(/<<PKGBUILDDIR>>/doc/manual/R-data.vrs [35])
(Concept index) [36]
(/<<PKGBUILDDIR>>/doc/manual/R-data.cps) [37]
[38] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/s
hare/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf
-dist/fonts/type1/public/amsfonts/cm/cmtt12.pfb></usr/share/texlive/texmf-dist/
fonts/type1/public/amsfonts/cm/cmtt9.pfb>
Output written on R-data.pdf (42 pages, 311813 bytes).
Transcript written on R-data.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-data.t2d/pdf/xtr/R-dat
a.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-data.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-data.toc [-1])
[-2] (/<<PKGBUILDDIR>>/doc/manual/R-data.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-data.toc)
(Acknowledgements)
(/<<PKGBUILDDIR>>/doc/manual/R-data.aux)
Underfull \hbox (badness 10000) in paragraph at lines 87--87
 [][]@textbf DBI

Overfull \hbox (4.50087pt too wide) in paragraph at lines 87--87
 @texttt package=DBI[]@textrm )[][]| 

Overfull \hbox (8.53186pt too wide) in paragraph at lines 88--88
 [][]@textbf dataframes2xls

Overfull \hbox (67.73643pt too wide) in paragraph at lines 88--88
 @texttt package=dataframes2xls[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 89--89
 [][]@textbf foreign

Overfull \hbox (27.49562pt too wide) in paragraph at lines 89--89
 @texttt package=foreign[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 90--90
 [][]@textbf gdata

Overfull \hbox (15.99825pt too wide) in paragraph at lines 90--90
 @texttt package=gdata[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 91--91
 [][]@textbf ncdf4

Overfull \hbox (15.99825pt too wide) in paragraph at lines 91--91
 @texttt package=ncdf4[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 92--92
 [][]@textbf rJava

Overfull \hbox (15.99825pt too wide) in paragraph at lines 92--92
 @texttt package=rJava[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 93--93
 [][]@textbf RJDBC

Overfull \hbox (15.99825pt too wide) in paragraph at lines 93--93
 @texttt package=RJDBC[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 94--94
 [][]@textbf RMySQL

Overfull \hbox (21.74693pt too wide) in paragraph at lines 94--94
 @texttt package=RMySQL[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 95--95
 [][]@textbf RNetCDF

Overfull \hbox (27.49562pt too wide) in paragraph at lines 95--95
 @texttt package=RNetCDF[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 96--96
 [][]@textbf RODBC

Overfull \hbox (15.99825pt too wide) in paragraph at lines 96--96
 @texttt package=RODBC[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 97--97
 [][]@textbf ROracle

Overfull \hbox (27.49562pt too wide) in paragraph at lines 97--97
 @texttt package=ROracle[]@textrm )[][]| 

Overfull \hbox (2.70708pt too wide) in paragraph at lines 98--98
 [][]@textbf RPostgreSQL

Overfull \hbox (50.49037pt too wide) in paragraph at lines 98--98
 @texttt package=RPostgreSQL[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 101--101
 [][]@textbf RSQLite

Overfull \hbox (27.49562pt too wide) in paragraph at lines 101--101
 @texttt package=RSQLite[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 103--103
 [][]@textbf WriteXLS

Overfull \hbox (33.24431pt too wide) in paragraph at lines 103--103
 @texttt package=WriteXLS[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 104--104
 [][]@textbf XLConnect

Overfull \hbox (38.993pt too wide) in paragraph at lines 104--104
 @texttt package=XLConnect[]@textrm )[][]| 

Underfull \hbox (badness 10000) in paragraph at lines 105--105
 [][]@textbf XML

Overfull \hbox (4.50087pt too wide) in paragraph at lines 105--105
 @texttt package=XML[]@textrm )[][]| 
[1] [2] Chapter 1 [3]
Writing index file R-data.cp
[4] [5] [6] [7] Chapter 2 [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15]
[16] Chapter 4 [17] [18] [19] [20] [21] [22] [23] Chapter 5 [24]
Underfull \hbox (badness 10000) in paragraph at lines 1755--1761
[]@textrm Packages [][]@textbf h5 @textrm (@texttt https://  CRAN.  R-project. 
 org/  package=h5[]@textrm )[][], Bio-con-duc-tor's @textbf rhdf5@textrm ,
Chapter 6 [25] Chapter 7 [26] [27] [28] [29] [30] Chapter 8 [31] Chapter 9
[32] Appendix A [33] (Function and variable index) [34]
(/<<PKGBUILDDIR>>/doc/manual/R-data.vrs [35])
(Concept index) [36]
(/<<PKGBUILDDIR>>/doc/manual/R-data.cps) [37]
[38] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/s
hare/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf
-dist/fonts/type1/public/amsfonts/cm/cmtt12.pfb></usr/share/texlive/texmf-dist/
fonts/type1/public/amsfonts/cm/cmtt9.pfb>
Output written on R-data.pdf (42 pages, 311811 bytes).
Transcript written on R-data.log.
TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-exts.texi
@setfilename R-exts.info
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-exts.t2d/pdf/xtr/R-ext
s.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-exts.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements)
Chapter 1 [1]
Writing index file R-exts.cp
Cross reference values unknown; you must run TeX again. [2] [3] [4] [5]
Underfull \hbox (badness 10000) in paragraph at lines 493--496
[]@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t
exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo
[]@textrm '[] and
[6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21]
[22] [23] [24] [25]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 2002--2002
 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF
LAGS)[] 
[26] [27] [28] [29] [30]
Overfull \hbox (67.78206pt too wide) in paragraph at lines 2391--2391
 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c
pp model/*/*.cpp model/*/*/*.cpp)[] 

Overfull \hbox (53.60722pt too wide) in paragraph at lines 2393--2393
 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien
a07models.o $(SOURCES:.cpp=.o)[] 
[31] [32]
Overfull \hbox (16.92342pt too wide) in paragraph at lines 2531--2531
 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar
e defined.[]  
[33] [34] [35]
Overfull \hbox (60.93126pt too wide) in paragraph at lines 2764--2764
 []            @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX
11PICFLAGS)")[] 
[36]
Underfull \hbox (badness 7221) in paragraph at lines 2812--2818
[][][]@smallrm See [][]@smalltt https://  isocpp.  org/  std/  standing-documen
ts/  sd-6-sg10-feature-test-recommendations[][][] @smallrm or
[37]
Overfull \hbox (2.98494pt too wide) in paragraph at lines 2906--2908
[][][]@smallrm On sys-tems which use sub-architectures, architecture-specific v
er-sions such as @smalltt ~/.R/check.Renviron.i386[]
[38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52]
[53] [54] [55] [56] [57] [58] [59] [60] [61]
Overfull \hbox (53.86903pt too wide) in paragraph at lines 4795--4795
 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v
ersion")[] 

Overfull \hbox (48.12035pt too wide) in paragraph at lines 4797--4797
 []  @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse 
= "."))[] 

Overfull \hbox (65.36641pt too wide) in paragraph at lines 4798--4798
 []  @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a
vailable")[] 
[62]
Overfull \hbox (76.86378pt too wide) in paragraph at lines 4813--4813
 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor 
version 52.0[] 
[63] [64] [65] [66]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 5128--5128
 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@
euro"[] 
[67] [68] [69]
Overfull \hbox (19.3769pt too wide) in paragraph at lines 5325--5325
 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall
oc[] 
[70]
Overfull \hbox (25.1256pt too wide) in paragraph at lines 5421--5421
 []@texttt erf expm1 fmin fmax lgamma lround loglp round snprintf strcasecmp tr
unc[] 

Overfull \hbox (53.86903pt too wide) in paragraph at lines 5452--5452
 []@texttt 'register' storage class specifier is deprecated and incompatible wi
th C++17[] 
[71]
Overfull \hbox (13.62822pt too wide) in paragraph at lines 5500--5500
 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__)
)[] 
[72] [73] [74]
Overfull \hbox (13.62822pt too wide) in paragraph at lines 5765--5765
 []@texttt #define dngettext(pkg, String, StringP, N) (N > 1 ? StringP : String
)[] 
[75] [76] [77] Chapter 2 [78] [79] [80] [81] [82] [83] [84] [85] [86] [87]
[88] [89] [90] [91]
Underfull \hbox (badness 10000) in paragraph at lines 7023--7030
[]@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi
lename@texttt }[] @textrm and
[92] [93] [94] [95] [96] [97] Chapter 3 [98] [99] [100] [101] [102] [103]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 7945--7945
 []                 @texttt as.integer(runif(N, 1, 12)), as.integer(runif(N, 1,
 28)))[] 
[104] [105] [106] Chapter 4 [107] [108] [109]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 8323--8323
 []@texttt evaluation nested too deeply: infinite recursion / options(expressio
ns=)?[] 
[110]
Overfull \hbox (25.25755pt too wide) in paragraph at lines 8364--8364
 []@smalltt Message:  Error: no valid set of coefficients has been found: pleas
e supply starting values[] 
[111]
Overfull \hbox (20.53261pt too wide) in paragraph at lines 8468--8468
 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star
t, etastart = etastart,[] 
[112]
Overfull \hbox (38.96663pt too wide) in paragraph at lines 8498--8507
[]@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by
 e.g. @texttt debug(stats:::predict.Arima)[]@textrm .
[113] [114] [115]
Overfull \hbox (44.18301pt too wide) in paragraph at lines 8776--8777
[][][]@smallrm see [][]@smalltt http://  llvm.  org/  devmtg/  2014-04/  PDFs/ 
 LightningTalks/  EuroLLVM%202014%20--%20container%20overflow.
[116] [117]
Overfull \hbox (78.17732pt too wide) in paragraph at lines 8914--8914
 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_
odr_violation=0'[] 

Overfull \hbox (29.50735pt too wide) in paragraph at lines 8942--8944
[]@textrm This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by @t
exttt -fsanitize=undefined,address[]
[118]
Overfull \hbox (32.18782pt too wide) in paragraph at lines 8956--8956
 []@texttt signed-integer-overflow,unreachable,unsigned-integer-overflow,vla-bo
und,vptr[] 
[119]
Overfull \hbox (72.42863pt too wide) in paragraph at lines 9074--9074
 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u
pper bound of 0[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 9119--9119
 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl
assi,[] 
[120]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 9122--9122
 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t(
cu)),[] 
[121]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 9201--9201
 []@texttt #5  0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9
698f98,[] 
[122] [123]
Overfull \hbox (124.16682pt too wide) in paragraph at lines 9406--9406
 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati
on [-Wlto-type-mismatch][] 
[124]
Overfull \hbox (147.16158pt too wide) in paragraph at lines 9423--9423
 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla
ration [-Wlto-type-mismatch][] 

Overfull \hbox (141.41289pt too wide) in paragraph at lines 9434--9434
 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar
ation [-Wlto-type-mismatch][] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 9454--9454
 []                                                                        @tex
ttt 1[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 9463--9463
 []                                                                        @tex
ttt 1[] 

Overfull \hbox (43.6852pt too wide) in paragraph at lines 9464--9464
 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to 
INTEGER(4)[] 
Chapter 5 [125] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135]
Overfull \hbox (30.87428pt too wide) in paragraph at lines 10241--10241
 []                      @texttt double *w, int *iper, double *span, double *al
pha,[] 

Overfull \hbox (51.66371pt too wide) in paragraph at lines 10297--10297
 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de
riv, PACKAGE = "splines")[] 
[136] [137] [138] [139] [140] [141] [142] [143]
Overfull \hbox (37.93651pt too wide) in paragraph at lines 10876--10876
 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH)
" -lpackB[] 
[144] [145] [146] [147] [148] [149] [150] [151] [152] [153]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 11657--11657
 []    @texttt if(ign == NA_LOGICAL) error("'ignore_quotes' must be TRUE or FAL
SE");[] 
[154]
Underfull \hbox (badness 10000) in paragraph at lines 11718--11720
[]@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated
3[] @textrm are fast ver-sions of R's
[155] [156] [157] [158] [159] [160] [161]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12245--12245
 []    @texttt // a version with (too) much PROTECT()ion .. "better safe than s
orry"[] 
[162] [163]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12368--12368
 []    @texttt gradient = PROTECT(allocMatrix(REALSXP, LENGTH(ans), LENGTH(thet
a)));[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 12373--12373
 []    @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an
s)) {[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 12428--12428
 []    @texttt gradient = PROTECT(allocMatrix(REALSXP, LENGTH(ans), LENGTH(thet
a)));[] 
[164]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12440--12440
 []    @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an
s)) {[] 
[165]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 12539--12539
 []        @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV
alue));[] 
[166] [167]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12675--12675
 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one
xit);[] 
[168]
Overfull \hbox (43.6852pt too wide) in paragraph at lines 12756--12756
 []    @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_
NilValue);[] 
[169]
Overfull \hbox (72.42863pt too wide) in paragraph at lines 12856--12856
 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE
_ANY} cetype_t;[] 
Chapter 6 [170] [171] [172] [173] [174] [175] [176] [177]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 13549--13549
 []        @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term
inator[] 
[178] [179] [180] [181] [182] [183] [184] [185]
Underfull \hbox (badness 10000) in paragraph at lines 14205--14209
 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na
.last, decreasing)[]@textrm .
[186] Warning: unbalanced parentheses in @def... [187] [188]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 14418--14418
 []                     @texttt void (*clean)(void *data, Rboolean jump), void 
*cdata,[] 
[189] [190] [191] [192] [193] Chapter 7 [194] [195] Chapter 8 [196] [197]
[198]
Overfull \hbox (43.6852pt too wide) in paragraph at lines 15174--15174
 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s
tatic libR[] 
[199]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 15217--15217
 []@texttt extern int  (*ptr_R_ReadConsole)(const char *, unsigned char *, int,
 int);[] 

Overfull \hbox (55.18257pt too wide) in paragraph at lines 15233--15233
 []@texttt extern int  (*ptr_R_EditFiles)(int, const char **, const char **, co
nst char *);[] 
[200] [201] [202] [203]
Underfull \hbox (badness 10000) in paragraph at lines 15476--15483
 @texttt modules/internet/nanoftp.c[]@textrm , @texttt src/modules/internet/nan
ohttp.c[] @textrm and @texttt src/
[204] [205] [206] [207] [208]
Underfull \hbox (badness 10000) in paragraph at lines 15859--15863
 []@textrm If the de-sired ar-chi-tec-ture is known, look in @texttt Software\R
-core\R32[] @textrm or
(Function and variable index) [209]
No file R-exts.vrs.
(Concept index) [210]
No file R-exts.cps.
[211] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.p
fb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr
/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share
/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/tex
live/texmf-dist/fonts/type1/public/amsfonts/cm/cmss10.pfb></usr/share/texlive/t
exmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmsy9.pfb></usr/share/texlive/texmf-dist/fonts/type
1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmti9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsf
onts/cm/cmtt10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmtt12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt
9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/latxfont/lcirc
le1.pfb>
Output written on R-exts.pdf (214 pages, 922080 bytes).
Transcript written on R-exts.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-exts.t2d/pdf/xtr/R-ext
s.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-exts.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-exts.toc [-1] [-2]
[-3] [-4]) [-5]
(/<<PKGBUILDDIR>>/doc/manual/R-exts.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-exts.toc)
(Acknowledgements)
(/<<PKGBUILDDIR>>/doc/manual/R-exts.aux) Chapter 1
[1]
Writing index file R-exts.cp
[2] [3] [4] [5]
Underfull \hbox (badness 10000) in paragraph at lines 493--496
[]@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t
exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo
[]@textrm '[] and
[6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21]
[22] [23] [24] [25]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 2002--2002
 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF
LAGS)[] 
[26] [27] [28] [29] [30]
Overfull \hbox (67.78206pt too wide) in paragraph at lines 2391--2391
 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c
pp model/*/*.cpp model/*/*/*.cpp)[] 

Overfull \hbox (53.60722pt too wide) in paragraph at lines 2393--2393
 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien
a07models.o $(SOURCES:.cpp=.o)[] 
[31] [32]
Overfull \hbox (16.92342pt too wide) in paragraph at lines 2531--2531
 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar
e defined.[]  
[33] [34] [35]
Overfull \hbox (60.93126pt too wide) in paragraph at lines 2764--2764
 []            @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX
11PICFLAGS)")[] 
[36]
Underfull \hbox (badness 7221) in paragraph at lines 2812--2818
[][][]@smallrm See [][]@smalltt https://  isocpp.  org/  std/  standing-documen
ts/  sd-6-sg10-feature-test-recommendations[][][] @smallrm or
[37]
Overfull \hbox (2.98494pt too wide) in paragraph at lines 2906--2908
[][][]@smallrm On sys-tems which use sub-architectures, architecture-specific v
er-sions such as @smalltt ~/.R/check.Renviron.i386[]
[38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52]
[53] [54] [55] [56] [57] [58] [59] [60] [61]
Overfull \hbox (53.86903pt too wide) in paragraph at lines 4795--4795
 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v
ersion")[] 

Overfull \hbox (48.12035pt too wide) in paragraph at lines 4797--4797
 []  @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse 
= "."))[] 

Overfull \hbox (65.36641pt too wide) in paragraph at lines 4798--4798
 []  @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a
vailable")[] 

Overfull \hbox (76.86378pt too wide) in paragraph at lines 4813--4813
 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor 
version 52.0[] 
[62] [63] [64] [65] [66]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 5128--5128
 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@
euro"[] 
[67] [68] [69]
Overfull \hbox (19.3769pt too wide) in paragraph at lines 5325--5325
 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall
oc[] 
[70]
Overfull \hbox (25.1256pt too wide) in paragraph at lines 5421--5421
 []@texttt erf expm1 fmin fmax lgamma lround loglp round snprintf strcasecmp tr
unc[] 

Overfull \hbox (53.86903pt too wide) in paragraph at lines 5452--5452
 []@texttt 'register' storage class specifier is deprecated and incompatible wi
th C++17[] 
[71]
Overfull \hbox (13.62822pt too wide) in paragraph at lines 5500--5500
 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__)
)[] 
[72] [73] [74]
Overfull \hbox (13.62822pt too wide) in paragraph at lines 5765--5765
 []@texttt #define dngettext(pkg, String, StringP, N) (N > 1 ? StringP : String
)[] 
[75] [76] [77] Chapter 2 [78] [79] [80] [81] [82] [83] [84] [85] [86] [87]
[88] [89] [90] [91]
Underfull \hbox (badness 10000) in paragraph at lines 7023--7030
[]@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi
lename@texttt }[] @textrm and
[92] [93] [94] [95] [96] [97] Chapter 3 [98] [99] [100] [101] [102] [103]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 7945--7945
 []                 @texttt as.integer(runif(N, 1, 12)), as.integer(runif(N, 1,
 28)))[] 
[104] [105] [106] Chapter 4 [107] [108] [109]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 8323--8323
 []@texttt evaluation nested too deeply: infinite recursion / options(expressio
ns=)?[] 
[110]
Overfull \hbox (25.25755pt too wide) in paragraph at lines 8364--8364
 []@smalltt Message:  Error: no valid set of coefficients has been found: pleas
e supply starting values[] 
[111]
Overfull \hbox (20.53261pt too wide) in paragraph at lines 8468--8468
 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star
t, etastart = etastart,[] 
[112]
Overfull \hbox (38.96663pt too wide) in paragraph at lines 8498--8507
[]@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by
 e.g. @texttt debug(stats:::predict.Arima)[]@textrm .
[113] [114] [115]
Overfull \hbox (44.18301pt too wide) in paragraph at lines 8776--8777
[][][]@smallrm see [][]@smalltt http://  llvm.  org/  devmtg/  2014-04/  PDFs/ 
 LightningTalks/  EuroLLVM%202014%20--%20container%20overflow.
[116] [117]
Overfull \hbox (78.17732pt too wide) in paragraph at lines 8914--8914
 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_
odr_violation=0'[] 

Overfull \hbox (29.50735pt too wide) in paragraph at lines 8942--8944
[]@textrm This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by @t
exttt -fsanitize=undefined,address[]
[118]
Overfull \hbox (32.18782pt too wide) in paragraph at lines 8956--8956
 []@texttt signed-integer-overflow,unreachable,unsigned-integer-overflow,vla-bo
und,vptr[] 
[119]
Overfull \hbox (72.42863pt too wide) in paragraph at lines 9074--9074
 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u
pper bound of 0[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 9119--9119
 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl
assi,[] 
[120]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 9122--9122
 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t(
cu)),[] 
[121]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 9201--9201
 []@texttt #5  0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9
698f98,[] 
[122] [123]
Overfull \hbox (124.16682pt too wide) in paragraph at lines 9406--9406
 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati
on [-Wlto-type-mismatch][] 
[124]
Overfull \hbox (147.16158pt too wide) in paragraph at lines 9423--9423
 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla
ration [-Wlto-type-mismatch][] 

Overfull \hbox (141.41289pt too wide) in paragraph at lines 9434--9434
 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar
ation [-Wlto-type-mismatch][] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 9454--9454
 []                                                                        @tex
ttt 1[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 9463--9463
 []                                                                        @tex
ttt 1[] 

Overfull \hbox (43.6852pt too wide) in paragraph at lines 9464--9464
 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to 
INTEGER(4)[] 
Chapter 5 [125] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135]
Overfull \hbox (30.87428pt too wide) in paragraph at lines 10241--10241
 []                      @texttt double *w, int *iper, double *span, double *al
pha,[] 

Overfull \hbox (51.66371pt too wide) in paragraph at lines 10297--10297
 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de
riv, PACKAGE = "splines")[] 
[136] [137] [138] [139] [140] [141] [142] [143]
Overfull \hbox (37.93651pt too wide) in paragraph at lines 10876--10876
 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH)
" -lpackB[] 
[144] [145] [146] [147] [148] [149] [150] [151] [152] [153]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 11657--11657
 []    @texttt if(ign == NA_LOGICAL) error("'ignore_quotes' must be TRUE or FAL
SE");[] 
[154]
Underfull \hbox (badness 10000) in paragraph at lines 11718--11720
[]@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated
3[] @textrm are fast ver-sions of R's
[155] [156] [157] [158] [159] [160] [161]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12245--12245
 []    @texttt // a version with (too) much PROTECT()ion .. "better safe than s
orry"[] 
[162] [163]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12368--12368
 []    @texttt gradient = PROTECT(allocMatrix(REALSXP, LENGTH(ans), LENGTH(thet
a)));[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 12373--12373
 []    @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an
s)) {[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 12428--12428
 []    @texttt gradient = PROTECT(allocMatrix(REALSXP, LENGTH(ans), LENGTH(thet
a)));[] 
[164]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12440--12440
 []    @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an
s)) {[] 
[165]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 12539--12539
 []        @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV
alue));[] 
[166] [167]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12675--12675
 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one
xit);[] 
[168]
Overfull \hbox (43.6852pt too wide) in paragraph at lines 12756--12756
 []    @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_
NilValue);[] 
[169]
Overfull \hbox (72.42863pt too wide) in paragraph at lines 12856--12856
 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE
_ANY} cetype_t;[] 
Chapter 6 [170] [171] [172] [173] [174] [175] [176] [177]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 13549--13549
 []        @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term
inator[] 
[178] [179] [180] [181] [182] [183] [184] [185]
Underfull \hbox (badness 10000) in paragraph at lines 14205--14209
 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na
.last, decreasing)[]@textrm .
[186] Warning: unbalanced parentheses in @def... [187] [188]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 14418--14418
 []                     @texttt void (*clean)(void *data, Rboolean jump), void 
*cdata,[] 
[189] [190] [191] [192] [193] Chapter 7 [194] [195] Chapter 8 [196] [197]
[198]
Overfull \hbox (43.6852pt too wide) in paragraph at lines 15174--15174
 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s
tatic libR[] 
[199]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 15217--15217
 []@texttt extern int  (*ptr_R_ReadConsole)(const char *, unsigned char *, int,
 int);[] 

Overfull \hbox (55.18257pt too wide) in paragraph at lines 15233--15233
 []@texttt extern int  (*ptr_R_EditFiles)(int, const char **, const char **, co
nst char *);[] 
[200] [201] [202] [203]
Underfull \hbox (badness 10000) in paragraph at lines 15476--15483
 @texttt modules/internet/nanoftp.c[]@textrm , @texttt src/modules/internet/nan
ohttp.c[] @textrm and @texttt src/
[204] [205] [206] [207] [208]
Underfull \hbox (badness 10000) in paragraph at lines 15859--15863
 []@textrm If the de-sired ar-chi-tec-ture is known, look in @texttt Software\R
-core\R32[] @textrm or
(Function and variable index) [209]
(/<<PKGBUILDDIR>>/doc/manual/R-exts.vrs [210]
[211] [212]) (Concept index) [213]
(/<<PKGBUILDDIR>>/doc/manual/R-exts.cps [214])
[215] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr1
0.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/shar
e/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share/texliv
e/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texlive/texm
f-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/cm/cmss10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmti9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmtt10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt
12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/latxfont/lcircle1.pf
b>
Output written on R-exts.pdf (222 pages, 986214 bytes).
Transcript written on R-exts.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-exts.t2d/pdf/xtr/R-ext
s.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-exts.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-exts.toc [-1] [-2]
[-3] [-4]) [-5]
(/<<PKGBUILDDIR>>/doc/manual/R-exts.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-exts.toc)
(Acknowledgements)
(/<<PKGBUILDDIR>>/doc/manual/R-exts.aux) Chapter 1
[1]
Writing index file R-exts.cp
[2] [3] [4] [5]
Underfull \hbox (badness 10000) in paragraph at lines 493--496
[]@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t
exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo
[]@textrm '[] and
[6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21]
[22] [23] [24] [25]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 2002--2002
 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF
LAGS)[] 
[26] [27] [28] [29] [30]
Overfull \hbox (67.78206pt too wide) in paragraph at lines 2391--2391
 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c
pp model/*/*.cpp model/*/*/*.cpp)[] 

Overfull \hbox (53.60722pt too wide) in paragraph at lines 2393--2393
 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien
a07models.o $(SOURCES:.cpp=.o)[] 
[31] [32]
Overfull \hbox (16.92342pt too wide) in paragraph at lines 2531--2531
 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar
e defined.[]  
[33] [34] [35]
Overfull \hbox (60.93126pt too wide) in paragraph at lines 2764--2764
 []            @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX
11PICFLAGS)")[] 
[36]
Underfull \hbox (badness 7221) in paragraph at lines 2812--2818
[][][]@smallrm See [][]@smalltt https://  isocpp.  org/  std/  standing-documen
ts/  sd-6-sg10-feature-test-recommendations[][][] @smallrm or
[37]
Overfull \hbox (2.98494pt too wide) in paragraph at lines 2906--2908
[][][]@smallrm On sys-tems which use sub-architectures, architecture-specific v
er-sions such as @smalltt ~/.R/check.Renviron.i386[]
[38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52]
[53] [54] [55] [56] [57] [58] [59] [60] [61]
Overfull \hbox (53.86903pt too wide) in paragraph at lines 4795--4795
 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v
ersion")[] 

Overfull \hbox (48.12035pt too wide) in paragraph at lines 4797--4797
 []  @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse 
= "."))[] 

Overfull \hbox (65.36641pt too wide) in paragraph at lines 4798--4798
 []  @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a
vailable")[] 

Overfull \hbox (76.86378pt too wide) in paragraph at lines 4813--4813
 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor 
version 52.0[] 
[62] [63] [64] [65] [66]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 5128--5128
 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@
euro"[] 
[67] [68] [69]
Overfull \hbox (19.3769pt too wide) in paragraph at lines 5325--5325
 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall
oc[] 
[70]
Overfull \hbox (25.1256pt too wide) in paragraph at lines 5421--5421
 []@texttt erf expm1 fmin fmax lgamma lround loglp round snprintf strcasecmp tr
unc[] 

Overfull \hbox (53.86903pt too wide) in paragraph at lines 5452--5452
 []@texttt 'register' storage class specifier is deprecated and incompatible wi
th C++17[] 
[71]
Overfull \hbox (13.62822pt too wide) in paragraph at lines 5500--5500
 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__)
)[] 
[72] [73] [74]
Overfull \hbox (13.62822pt too wide) in paragraph at lines 5765--5765
 []@texttt #define dngettext(pkg, String, StringP, N) (N > 1 ? StringP : String
)[] 
[75] [76] [77] Chapter 2 [78] [79] [80] [81] [82] [83] [84] [85] [86] [87]
[88] [89] [90] [91]
Underfull \hbox (badness 10000) in paragraph at lines 7023--7030
[]@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi
lename@texttt }[] @textrm and
[92] [93] [94] [95] [96] [97] Chapter 3 [98] [99] [100] [101] [102] [103]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 7945--7945
 []                 @texttt as.integer(runif(N, 1, 12)), as.integer(runif(N, 1,
 28)))[] 
[104] [105] [106] Chapter 4 [107] [108] [109]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 8323--8323
 []@texttt evaluation nested too deeply: infinite recursion / options(expressio
ns=)?[] 
[110]
Overfull \hbox (25.25755pt too wide) in paragraph at lines 8364--8364
 []@smalltt Message:  Error: no valid set of coefficients has been found: pleas
e supply starting values[] 
[111]
Overfull \hbox (20.53261pt too wide) in paragraph at lines 8468--8468
 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star
t, etastart = etastart,[] 
[112]
Overfull \hbox (38.96663pt too wide) in paragraph at lines 8498--8507
[]@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by
 e.g. @texttt debug(stats:::predict.Arima)[]@textrm .
[113] [114] [115]
Overfull \hbox (44.18301pt too wide) in paragraph at lines 8776--8777
[][][]@smallrm see [][]@smalltt http://  llvm.  org/  devmtg/  2014-04/  PDFs/ 
 LightningTalks/  EuroLLVM%202014%20--%20container%20overflow.
[116] [117]
Overfull \hbox (78.17732pt too wide) in paragraph at lines 8914--8914
 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_
odr_violation=0'[] 

Overfull \hbox (29.50735pt too wide) in paragraph at lines 8942--8944
[]@textrm This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by @t
exttt -fsanitize=undefined,address[]
[118]
Overfull \hbox (32.18782pt too wide) in paragraph at lines 8956--8956
 []@texttt signed-integer-overflow,unreachable,unsigned-integer-overflow,vla-bo
und,vptr[] 
[119]
Overfull \hbox (72.42863pt too wide) in paragraph at lines 9074--9074
 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u
pper bound of 0[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 9119--9119
 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl
assi,[] 
[120]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 9122--9122
 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t(
cu)),[] 
[121]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 9201--9201
 []@texttt #5  0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9
698f98,[] 
[122] [123]
Overfull \hbox (124.16682pt too wide) in paragraph at lines 9406--9406
 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati
on [-Wlto-type-mismatch][] 
[124]
Overfull \hbox (147.16158pt too wide) in paragraph at lines 9423--9423
 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla
ration [-Wlto-type-mismatch][] 

Overfull \hbox (141.41289pt too wide) in paragraph at lines 9434--9434
 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar
ation [-Wlto-type-mismatch][] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 9454--9454
 []                                                                        @tex
ttt 1[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 9463--9463
 []                                                                        @tex
ttt 1[] 

Overfull \hbox (43.6852pt too wide) in paragraph at lines 9464--9464
 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to 
INTEGER(4)[] 
Chapter 5 [125] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135]
Overfull \hbox (30.87428pt too wide) in paragraph at lines 10241--10241
 []                      @texttt double *w, int *iper, double *span, double *al
pha,[] 

Overfull \hbox (51.66371pt too wide) in paragraph at lines 10297--10297
 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de
riv, PACKAGE = "splines")[] 
[136] [137] [138] [139] [140] [141] [142] [143]
Overfull \hbox (37.93651pt too wide) in paragraph at lines 10876--10876
 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH)
" -lpackB[] 
[144] [145] [146] [147] [148] [149] [150] [151] [152] [153]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 11657--11657
 []    @texttt if(ign == NA_LOGICAL) error("'ignore_quotes' must be TRUE or FAL
SE");[] 
[154]
Underfull \hbox (badness 10000) in paragraph at lines 11718--11720
[]@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated
3[] @textrm are fast ver-sions of R's
[155] [156] [157] [158] [159] [160] [161]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12245--12245
 []    @texttt // a version with (too) much PROTECT()ion .. "better safe than s
orry"[] 
[162] [163]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12368--12368
 []    @texttt gradient = PROTECT(allocMatrix(REALSXP, LENGTH(ans), LENGTH(thet
a)));[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 12373--12373
 []    @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an
s)) {[] 

Overfull \hbox (14.94176pt too wide) in paragraph at lines 12428--12428
 []    @texttt gradient = PROTECT(allocMatrix(REALSXP, LENGTH(ans), LENGTH(thet
a)));[] 
[164]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12440--12440
 []    @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an
s)) {[] 
[165]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 12539--12539
 []        @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV
alue));[] 
[166] [167]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 12675--12675
 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one
xit);[] 
[168]
Overfull \hbox (43.6852pt too wide) in paragraph at lines 12756--12756
 []    @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_
NilValue);[] 
[169]
Overfull \hbox (72.42863pt too wide) in paragraph at lines 12856--12856
 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE
_ANY} cetype_t;[] 
Chapter 6 [170] [171] [172] [173] [174] [175] [176] [177]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 13549--13549
 []        @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term
inator[] 
[178] [179] [180] [181] [182] [183] [184] [185]
Underfull \hbox (badness 10000) in paragraph at lines 14205--14209
 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na
.last, decreasing)[]@textrm .
[186] Warning: unbalanced parentheses in @def... [187] [188]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 14418--14418
 []                     @texttt void (*clean)(void *data, Rboolean jump), void 
*cdata,[] 
[189] [190] [191] [192] [193] Chapter 7 [194] [195] Chapter 8 [196] [197]
[198]
Overfull \hbox (43.6852pt too wide) in paragraph at lines 15174--15174
 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s
tatic libR[] 
[199]
Overfull \hbox (20.69044pt too wide) in paragraph at lines 15217--15217
 []@texttt extern int  (*ptr_R_ReadConsole)(const char *, unsigned char *, int,
 int);[] 

Overfull \hbox (55.18257pt too wide) in paragraph at lines 15233--15233
 []@texttt extern int  (*ptr_R_EditFiles)(int, const char **, const char **, co
nst char *);[] 
[200] [201] [202] [203]
Underfull \hbox (badness 10000) in paragraph at lines 15476--15483
 @texttt modules/internet/nanoftp.c[]@textrm , @texttt src/modules/internet/nan
ohttp.c[] @textrm and @texttt src/
[204] [205] [206] [207] [208]
Underfull \hbox (badness 10000) in paragraph at lines 15859--15863
 []@textrm If the de-sired ar-chi-tec-ture is known, look in @texttt Software\R
-core\R32[] @textrm or
(Function and variable index) [209]
(/<<PKGBUILDDIR>>/doc/manual/R-exts.vrs [210]
[211] [212]) (Concept index) [213]
(/<<PKGBUILDDIR>>/doc/manual/R-exts.cps [214])
[215] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr1
0.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/shar
e/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share/texliv
e/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texlive/texm
f-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/cm/cmss10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmti9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmtt10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt
12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/latxfont/lcircle1.pf
b>
Output written on R-exts.pdf (222 pages, 986185 bytes).
Transcript written on R-exts.log.
TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-intro.texi
@setfilename R-intro.info
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-intro.t2d/pdf/xtr/R-in
tro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-intro.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Preface)
Cross reference values unknown; you must run TeX again. Chapter 1 [1]
Writing index file R-intro.cp
[2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13]
[14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24]
[25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34]
Chapter 8 [35] [36] [37] </<<PKGBUILDDIR>>/doc/manual
/images/hist.pdf> </<<PKGBUILDDIR>>/doc/manual/images
/ecdf.pdf> [38] </<<PKGBUILDDIR>>/doc/manual/images/Q
Q.pdf> [39] </<<PKGBUILDDIR>>/doc/manual/images/ice.p
df> [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49]
[50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] [61] [62]
[63] [64] [65] [66] Chapter 12 [67] [68] [69] [70] [71]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 5741--5741
 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{
n-x})))[] 
[72] [73] [74] [75] [76] </<<PKGBUILDDIR>>/doc/manual
/images/fig11.pdf> [77] </<<PKGBUILDDIR>>/doc/manual/
images/fig12.pdf> [78] [79] [80] [81] Chapter 13 [82]
Underfull \hbox (badness 10000) in paragraph at lines 6447--6452
[]@textrm Users con-nected to the In-ter-net can use the @texttt install.packag
es()[] @textrm and
[83] Chapter 14 [84] [85]
Underfull \hbox (badness 10000) in paragraph at lines 6647--6652
 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t
extrm and
[86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95]
[96] [97] [98] Appendix C [99] [100] Appendix D [101]
No file R-intro.vrs.
Appendix E [102]
No file R-intro.cps.
Appendix F [103] [104] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmcsc10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/a
msfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfont
s/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cm
mi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb
></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/s
hare/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/tex
live/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share/texlive/tex
mf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texlive/texmf-dis
t/fonts/type1/public/amsfonts/cm/cmsl9.pfb></usr/share/texlive/texmf-dist/fonts
/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmsy9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmti10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti
9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt12.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/public/amsfonts/latxfont/lcircle1.pfb>
Output written on R-intro.pdf (107 pages, 576742 bytes).
Transcript written on R-intro.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-intro.t2d/pdf/xtr/R-in
tro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-intro.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-intro.toc [-1]
[-2] [-3]) [-4]
(/<<PKGBUILDDIR>>/doc/manual/R-intro.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-intro.toc) (Preface)
(/<<PKGBUILDDIR>>/doc/manual/R-intro.aux) Chapter 1
[1]
Writing index file R-intro.cp
[2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13]
[14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24]
[25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34]
Chapter 8 [35] [36] [37] </<<PKGBUILDDIR>>/doc/manual
/images/hist.pdf> </<<PKGBUILDDIR>>/doc/manual/images
/ecdf.pdf> [38] </<<PKGBUILDDIR>>/doc/manual/images/Q
Q.pdf> [39] </<<PKGBUILDDIR>>/doc/manual/images/ice.p
df> [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49]
[50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] [61] [62]
[63] [64] [65] [66] Chapter 12 [67] [68] [69] [70] [71]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 5741--5741
 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{
n-x})))[] 
[72] [73] [74] [75] [76] </<<PKGBUILDDIR>>/doc/manual
/images/fig11.pdf> [77] </<<PKGBUILDDIR>>/doc/manual/
images/fig12.pdf> [78] [79] [80] [81] Chapter 13 [82]
Underfull \hbox (badness 10000) in paragraph at lines 6447--6452
[]@textrm Users con-nected to the In-ter-net can use the @texttt install.packag
es()[] @textrm and
[83] Chapter 14 [84] [85]
Underfull \hbox (badness 10000) in paragraph at lines 6647--6652
 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t
extrm and
[86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95]
[96] [97] [98] Appendix C [99] [100] Appendix D [101]
(/<<PKGBUILDDIR>>/doc/manual/R-intro.vrs [102]
[103]) Appendix E [104]
(/<<PKGBUILDDIR>>/doc/manual/R-intro.cps [105])
Appendix F [106] [107] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmcsc10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/a
msfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfont
s/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/c
mmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pf
b></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr
/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr12.pfb></usr/share/
texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share/texlive/texmf-dist/fonts
/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texlive/texmf-dist/fonts/type1
/public/amsfonts/cm/cmsl9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public
/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti
10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti9.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt12.pfb></usr/share/
texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/latxfont/lcircle1.pfb>
Output written on R-intro.pdf (113 pages, 633226 bytes).
Transcript written on R-intro.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-intro.t2d/pdf/xtr/R-in
tro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-intro.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-intro.toc [-1]
[-2] [-3]) [-4]
(/<<PKGBUILDDIR>>/doc/manual/R-intro.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-intro.toc) (Preface)
(/<<PKGBUILDDIR>>/doc/manual/R-intro.aux) Chapter 1
[1]
Writing index file R-intro.cp
[2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13]
[14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24]
[25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34]
Chapter 8 [35] [36] [37] </<<PKGBUILDDIR>>/doc/manual
/images/hist.pdf> </<<PKGBUILDDIR>>/doc/manual/images
/ecdf.pdf> [38] </<<PKGBUILDDIR>>/doc/manual/images/Q
Q.pdf> [39] </<<PKGBUILDDIR>>/doc/manual/images/ice.p
df> [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49]
[50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] [61] [62]
[63] [64] [65] [66] Chapter 12 [67] [68] [69] [70] [71]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 5741--5741
 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{
n-x})))[] 
[72] [73] [74] [75] [76] </<<PKGBUILDDIR>>/doc/manual
/images/fig11.pdf> [77] </<<PKGBUILDDIR>>/doc/manual/
images/fig12.pdf> [78] [79] [80] [81] Chapter 13 [82]
Underfull \hbox (badness 10000) in paragraph at lines 6447--6452
[]@textrm Users con-nected to the In-ter-net can use the @texttt install.packag
es()[] @textrm and
[83] Chapter 14 [84] [85]
Underfull \hbox (badness 10000) in paragraph at lines 6647--6652
 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t
extrm and
[86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95]
[96] [97] [98] Appendix C [99] [100] Appendix D [101]
(/<<PKGBUILDDIR>>/doc/manual/R-intro.vrs [102]
[103]) Appendix E [104]
(/<<PKGBUILDDIR>>/doc/manual/R-intro.cps [105])
Appendix F [106] [107] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmcsc10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pu
blic/amsfonts/cm/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/a
msfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfont
s/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/c
mmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pf
b></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr
/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr12.pfb></usr/share/
texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share/texlive/texmf-dist/fonts
/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texlive/texmf-dist/fonts/type1
/public/amsfonts/cm/cmsl9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public
/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti
10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti9.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt12.pfb></usr/share/
texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/latxfont/lcircle1.pfb>
Output written on R-intro.pdf (113 pages, 633335 bytes).
Transcript written on R-intro.log.
TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-ints.texi
@setfilename R-ints.info
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-ints.t2d/pdf/xtr/R-int
s.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-ints.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1
Writing index file R-ints.cp
[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17]
[18]
Overfull \hbox (49.43388pt too wide) in paragraph at lines 1455--1455
 [] @texttt length(nM <- asNamespace("Matrix") )                    # 941 for M
atrix 1.2-6[] 

Overfull \hbox (78.17732pt too wide) in paragraph at lines 1456--1456
 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener
ics with methods[] 

Overfull \hbox (66.67995pt too wide) in paragraph at lines 1457--1457
 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' 
(group)generic[] 

Overfull \hbox (158.65895pt too wide) in paragraph at lines 1458--1458
 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix
" "ANY#ldiMatrix" "ANY#Matrix"[] 
[19] [20] [21] [22] [23] [24] Chapter 2 [25]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 1983--1983
 []    @texttt if (!is.character(x)) x <- structure(as.character(x), names = na
mes(x))[] 
[26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34]
Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47]
Chapter 7 [48]
Underfull \hbox (badness 10000) in paragraph at lines 3631--3640
@textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a 
sym-bolic link,

Underfull \hbox (badness 10000) in paragraph at lines 3631--3640
@texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl
ib[]@textrm ,
[49] Chapter 8 [50] [51] [52] [53] [54] [55]
Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value
[] @textrm pairs (with @textsl value[] @textrm a

Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex
tbf codetools

Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 @textrm (@texttt https://  CRAN.  R-project.  org/  package=codetools[]@textrm
 )[][] func-tions used

Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa
tchArgs = FALSE[] @textrm and
[56] [57] [58] [59] [60] Chapter 9 [61] [62] Chapter 10 [63] Chapter 11
[64] Chapter 12 [65] [66] (Function and variable index) [67] [68]
No file R-ints.vrs.
(Concept index) [69]
No file R-ints.cps.
[70] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfo
nts/cm/cmr8.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/c
mr9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pf
b></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/sh
are/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/te
xlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti9.pfb></usr/share/texlive/t
exmf-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmtt12.pfb></usr/share/texlive/texmf-dist/fo
nts/type1/public/amsfonts/cm/cmtt9.pfb>
Output written on R-ints.pdf (73 pages, 402278 bytes).
Transcript written on R-ints.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-ints.t2d/pdf/xtr/R-int
s.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-ints.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-ints.toc [-1] [-2])
[-3] (/<<PKGBUILDDIR>>/doc/manual/R-ints.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-ints.toc) Chapter 1
(/<<PKGBUILDDIR>>/doc/manual/R-ints.aux)
Writing index file R-ints.cp
[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17]
[18]
Overfull \hbox (49.43388pt too wide) in paragraph at lines 1455--1455
 [] @texttt length(nM <- asNamespace("Matrix") )                    # 941 for M
atrix 1.2-6[] 

Overfull \hbox (78.17732pt too wide) in paragraph at lines 1456--1456
 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener
ics with methods[] 

Overfull \hbox (66.67995pt too wide) in paragraph at lines 1457--1457
 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' 
(group)generic[] 

Overfull \hbox (158.65895pt too wide) in paragraph at lines 1458--1458
 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix
" "ANY#ldiMatrix" "ANY#Matrix"[] 
[19] [20] [21] [22] [23] [24] Chapter 2 [25]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 1983--1983
 []    @texttt if (!is.character(x)) x <- structure(as.character(x), names = na
mes(x))[] 
[26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34]
Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47]
Chapter 7 [48]
Underfull \hbox (badness 10000) in paragraph at lines 3631--3640
@textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a 
sym-bolic link,

Underfull \hbox (badness 10000) in paragraph at lines 3631--3640
@texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl
ib[]@textrm ,
[49] Chapter 8 [50] [51] [52] [53] [54] [55]
Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value
[] @textrm pairs (with @textsl value[] @textrm a

Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex
tbf codetools

Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 @textrm (@texttt https://  CRAN.  R-project.  org/  package=codetools[]@textrm
 )[][] func-tions used

Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa
tchArgs = FALSE[] @textrm and
[56] [57] [58] [59] [60] Chapter 9 [61] [62] Chapter 10 [63] Chapter 11
[64] Chapter 12 [65] [66] (Function and variable index) [67] [68]
(/<<PKGBUILDDIR>>/doc/manual/R-ints.vrs [69])
(Concept index) [70]
(/<<PKGBUILDDIR>>/doc/manual/R-ints.cps) [71] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share
/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texli
ve/texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/t
exmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf-dist/fo
nts/type1/public/amsfonts/cm/cmti9.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmtt12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmtt9.pfb>
Output written on R-ints.pdf (76 pages, 452849 bytes).
Transcript written on R-ints.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-ints.t2d/pdf/xtr/R-int
s.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-ints.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-ints.toc [-1] [-2])
[-3] (/<<PKGBUILDDIR>>/doc/manual/R-ints.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-ints.toc) Chapter 1
(/<<PKGBUILDDIR>>/doc/manual/R-ints.aux)
Writing index file R-ints.cp
[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17]
[18]
Overfull \hbox (49.43388pt too wide) in paragraph at lines 1455--1455
 [] @texttt length(nM <- asNamespace("Matrix") )                    # 941 for M
atrix 1.2-6[] 

Overfull \hbox (78.17732pt too wide) in paragraph at lines 1456--1456
 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener
ics with methods[] 

Overfull \hbox (66.67995pt too wide) in paragraph at lines 1457--1457
 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' 
(group)generic[] 

Overfull \hbox (158.65895pt too wide) in paragraph at lines 1458--1458
 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix
" "ANY#ldiMatrix" "ANY#Matrix"[] 
[19] [20] [21] [22] [23] [24] Chapter 2 [25]
Overfull \hbox (26.43913pt too wide) in paragraph at lines 1983--1983
 []    @texttt if (!is.character(x)) x <- structure(as.character(x), names = na
mes(x))[] 
[26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34]
Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47]
Chapter 7 [48]
Underfull \hbox (badness 10000) in paragraph at lines 3631--3640
@textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a 
sym-bolic link,

Underfull \hbox (badness 10000) in paragraph at lines 3631--3640
@texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl
ib[]@textrm ,
[49] Chapter 8 [50] [51] [52] [53] [54] [55]
Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value
[] @textrm pairs (with @textsl value[] @textrm a

Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex
tbf codetools

Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 @textrm (@texttt https://  CRAN.  R-project.  org/  package=codetools[]@textrm
 )[][] func-tions used

Underfull \hbox (badness 10000) in paragraph at lines 4039--4047
 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa
tchArgs = FALSE[] @textrm and
[56] [57] [58] [59] [60] Chapter 9 [61] [62] Chapter 10 [63] Chapter 11
[64] Chapter 12 [65] [66] (Function and variable index) [67] [68]
(/<<PKGBUILDDIR>>/doc/manual/R-ints.vrs [69])
(Concept index) [70]
(/<<PKGBUILDDIR>>/doc/manual/R-ints.cps) [71] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share
/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texli
ve/texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/t
exmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf-dist/fo
nts/type1/public/amsfonts/cm/cmti9.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmtt12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmtt9.pfb>
Output written on R-ints.pdf (76 pages, 452855 bytes).
Transcript written on R-ints.log.
TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-lang.texi
@setfilename R-lang.info
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-lang.t2d/pdf/xtr/R-lan
g.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-lang.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1
Writing index file R-lang.cp
Chapter 2 [1] [2] Cross reference values unknown; you must run TeX again.
Overfull \hbox (8.41086pt too wide) in paragraph at lines 293--294
 @textbf storage.mode| 
[3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16]
[17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] [28]
Chapter 5 [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39]
[40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48]
[49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58]
(Function and Variable Index) [59]
No file R-lang.vrs.
(Concept Index) [60]
No file R-lang.cps.
Appendix A [61] [62] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm
/cmr9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.
pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy9.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf
-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb>
Output written on R-lang.pdf (65 pages, 330517 bytes).
Transcript written on R-lang.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-lang.t2d/pdf/xtr/R-lan
g.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-lang.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-lang.toc [-1] [-2])
[-3] (/<<PKGBUILDDIR>>/doc/manual/R-lang.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-lang.toc) Chapter 1
(/<<PKGBUILDDIR>>/doc/manual/R-lang.aux)
Writing index file R-lang.cp
Chapter 2 [1] [2]
Overfull \hbox (8.41086pt too wide) in paragraph at lines 293--294
 @textbf storage.mode| 
[3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16]
[17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] [28]
Chapter 5 [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39]
[40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48]
[49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58]
(Function and Variable Index) [59]
(/<<PKGBUILDDIR>>/doc/manual/R-lang.vrs [60])
(Concept Index) [61]
(/<<PKGBUILDDIR>>/doc/manual/R-lang.cps) [62]
Appendix A [63] [64] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf
-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf-dist/
fonts/type1/public/amsfonts/cm/cmtt9.pfb>
Output written on R-lang.pdf (69 pages, 379570 bytes).
Transcript written on R-lang.log.
This is pdfTeX, Version 3.14159265-2.6-1.40.20 (TeX Live 2019/Debian) (preloaded format=pdfetex)
 restricted \write18 enabled.
entering extended mode


(/<<PKGBUILDDIR>>/doc/manual/R-lang.t2d/pdf/xtr/R-lan
g.texi (/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2019-09-20.22]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions,
(/<<PKGBUILDDIR>>/doc/manual/epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
Writing index file R-lang.vr
(/<<PKGBUILDDIR>>/doc/manual/R-defs.texi
(/usr/share/texmf/tex/texinfo/txi-en.tex))
(/<<PKGBUILDDIR>>/doc/manual/version.texi) [1{/var/li
b/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2]
(/<<PKGBUILDDIR>>/doc/manual/R-lang.toc [-1] [-2])
[-3] (/<<PKGBUILDDIR>>/doc/manual/R-lang.toc)
(/<<PKGBUILDDIR>>/doc/manual/R-lang.toc) Chapter 1
(/<<PKGBUILDDIR>>/doc/manual/R-lang.aux)
Writing index file R-lang.cp
Chapter 2 [1] [2]
Overfull \hbox (8.41086pt too wide) in paragraph at lines 293--294
 @textbf storage.mode| 
[3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16]
[17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] [28]
Chapter 5 [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39]
[40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48]
[49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58]
(Function and Variable Index) [59]
(/<<PKGBUILDDIR>>/doc/manual/R-lang.vrs [60])
(Concept Index) [61]
(/<<PKGBUILDDIR>>/doc/manual/R-lang.cps) [62]
Appendix A [63] [64] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></u
sr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/sha
re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texlive/texmf
-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/share/texlive/texmf-dist/
fonts/type1/public/amsfonts/cm/cmtt9.pfb>
Output written on R-lang.pdf (69 pages, 379564 bytes).
Transcript written on R-lang.log.
installing R manuals in PDF format ...
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc/manual'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make		prefix=/<<PKGBUILDDIR>>/debian/r-base-core/usr  \
		infodir=/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info	install-info
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/doc/manual'
/usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-FAQ.texi
/usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-admin.texi
/usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-data.texi
/usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-exts.texi
/usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-intro.texi
/usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-ints.texi
/usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-lang.texi
mkdir -p -- /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info
/usr/bin/install -c -m 644 "./dir" "/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info"
installing R info pages ...
updating '/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/dir' ...
you need to adjust /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/dir manually
you need to adjust /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/dir manually
you need to adjust /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/dir manually
you need to adjust /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/dir manually
you need to adjust /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/dir manually
you need to adjust /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/dir manually
you need to adjust /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/dir manually
make[2]: Leaving directory '/<<PKGBUILDDIR>>/doc/manual'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_movefiles	--sourcedir=debian/r-base-core -pr-doc-pdf
dh_movefiles	--sourcedir=debian/r-base-core -pr-doc-html
gunzip -9v /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/*.gz
/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-FAQ.info.gz:	 67.2% -- replaced with /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-FAQ.info
/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-admin.info.gz:	 68.0% -- replaced with /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-admin.info
/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-data.info.gz:	 70.6% -- replaced with /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-data.info
/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-exts.info-1.gz:	 66.6% -- replaced with /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-exts.info-1
/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-exts.info-2.gz:	 67.5% -- replaced with /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-exts.info-2
/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-exts.info-3.gz:	 85.7% -- replaced with /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-exts.info-3
/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-exts.info.gz:	 70.1% -- replaced with /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-exts.info
/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-intro.info.gz:	 70.1% -- replaced with /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-intro.info
/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-ints.info.gz:	 68.0% -- replaced with /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-ints.info
/<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-lang.info.gz:	 71.6% -- replaced with /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/info/R-lang.info
dh_movefiles	--sourcedir=debian/r-base-core -pr-doc-info
rm -vf	/<<PKGBUILDDIR>>/debian/r-doc-info/usr/share/info/dir		\
	/<<PKGBUILDDIR>>/debian/r-doc-info/usr/share/info/dir.old
removed '/<<PKGBUILDDIR>>/debian/r-doc-info/usr/share/info/dir'
touch install-indep-stamp
dh_installdirs -pr-mathlib usr/include usr/lib \
				usr/share/lintian/overrides \
				usr/lib/pkgconfig
dh_movefiles	--sourcedir=debian/r-base-core -pr-mathlib
(cd /<<PKGBUILDDIR>>/debian/r-mathlib/usr/lib; \
		ls -l ; \
		mv -v  libRmath.so 	     libRmath.so.1.0.0; \
		ln -sv libRmath.so.1.0.0 libRmath.so.1; \
		ln -sv libRmath.so.1  libRmath.so)
total 2200
-rw-rw-r-- 1 root root 1346334 Feb 28 20:17 libRmath.a
-rwxrwxr-x 1 root root  901776 Feb 28 20:17 libRmath.so
drwxr-xr-x 1 root root      22 Feb 28 20:55 pkgconfig
renamed 'libRmath.so' -> 'libRmath.so.1.0.0'
'libRmath.so.1' -> 'libRmath.so.1.0.0'
'libRmath.so' -> 'libRmath.so.1'
install -m 0644 src/include/Rmath.h			\
		/<<PKGBUILDDIR>>/debian/r-mathlib/usr/include
install -m 0644 debian/Rprofile.site /<<PKGBUILDDIR>>/debian/r-base-core/etc/R
install -m 0644 debian/Renviron.site /<<PKGBUILDDIR>>/debian/r-base-core/etc/R
(cd /<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/R/etc; \
	cat /<<PKGBUILDDIR>>/debian/Renviron-R_LIBS.patch | patch --verbose;	\
	mv Makeconf repositories ldpaths ../../../../etc/R/;	\
	mv Renviron Renviron.ucf;				\
	ln -s  /etc/R/Makeconf	.;				\
	ln -s  /etc/R/Renviron	.;				\
	ln -s  /etc/R/Renviron.site .;				\
	ln -s  /etc/R/Rprofile.site .;				\
	ln -s  /etc/R/ldpaths   .;                              \
	ln -s  /etc/R/repositories .				)
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|--- Renviron.orig	2003-04-04 06:52:22.000000000 -0500
|+++ Renviron	2003-04-04 06:49:05.000000000 -0500
--------------------------
patching file Renviron
Using Plan A...
Hunk #1 succeeded at 46 with fuzz 2 (offset 13 lines).
done
dh_bash-completion
# edd 12 Jan 2016  new location
#install -m 0644 debian/R.bash-completion \
#	debian/r-base-core/usr/share/bash-completion/completions/R
(cd /<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/; \
	ln -sv R/lib/libR.so . )
'./libR.so' -> 'R/lib/libR.so'
(cd debian/icon-class-patch && munpack rlogo_icon.png.mpack)
rlogo_icon.png (application/octet-stream)
install -m 0644 debian/icon-class-patch/rlogo_icon.png	\
	debian/r-base-core/usr/share/icons/hicolor/48x48/apps
install -m 0644 debian/icon-class-patch/R.desktop		\
	debian/r-base-core/usr/share/applications
rm debian/icon-class-patch/rlogo_icon.png
touch install-arch-stamp
*** binary-arch ***
dh_testdir -a
dh_testroot -a
dh_installdocs -pr-base-core doc/NEWS.* README \
				debian/README.Atlas \
				debian/README.mathlib
dh_installdocs -pr-mathlib  doc/NEWS.* README \
				debian/README.mathlib
dh_installdocs -pr-base-core-dbg
dh_installexamples -pr-mathlib	src/nmath/standalone/test.c
#dh_installmenu -a
# (cd /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../../lib/R/doc .)
(cd /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../R/doc .)
(cd /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../../lib/R/library .)
install -p -m 0644  debian/r-base-core.lintian \
   /<<PKGBUILDDIR>>/debian/r-base-core/usr/share/lintian/overrides/r-base-core
install -p -m 0644  debian/r-recommended.lintian \
   /<<PKGBUILDDIR>>/debian/r-recommended/usr/share/lintian/overrides/r-recommended
install -p -m 0644  debian/r-mathlib.lintian \
   /<<PKGBUILDDIR>>/debian/r-mathlib/usr/share/lintian/overrides/r-mathlib
dh_installchangelogs -a	-k doc/NEWS
dh_strip --dbg-package=r-base-core-dbg
dh_compress -a
dh_fixperms -a
dh_link -a
dh_makeshlibs -a
dh_installdeb -a
dh_perl -a
dh_shlibdeps -a -l /<<PKGBUILDDIR>>/debian/r-base-core/usr/lib/R/lib
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libtcl8.6.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libtk8.6.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so'
dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package r-base-core: substitution variable ${perl:Depends} used, but is not defined
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'r-base-core-dbg' in '../r-base-core-dbg_3.6.2.20200221-1_armhf.deb'.
dpkg-deb: building package 'r-mathlib' in '../r-mathlib_3.6.2.20200221-1_armhf.deb'.
dpkg-deb: building package 'r-base-core' in '../r-base-core_3.6.2.20200221-1_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../r-base_3.6.2.20200221-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-02-28T21:00:06Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


r-base_3.6.2.20200221-1_armhf.changes:
--------------------------------------

Format: 1.8
Date: Sat, 22 Feb 2020 07:25:19 -0600
Source: r-base
Binary: r-base-core r-base-core-dbg r-mathlib
Architecture: armhf
Version: 3.6.2.20200221-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Dirk Eddelbuettel <edd@debian.org>
Description:
 r-base-core - GNU R core of statistical computation and graphics system
 r-base-core-dbg - GNU R debug symbols for statistical comp. language and environmen
 r-mathlib  - GNU R standalone mathematics library
Changes:
 r-base (3.6.2.20200221-1) unstable; urgency=medium
 .
   * Initial rc release (r77847) of R 3.6.3 expected for Feb 29
 .
   * debian/control: Set Standards-Version: to current version
Checksums-Sha1:
 1ebb505c90c683c7f9ccb39beb572d851ab93ba2 6412028 r-base-core-dbg_3.6.2.20200221-1_armhf.deb
 075a57461466b36dcc0e22357a216c551b6431ea 24330296 r-base-core_3.6.2.20200221-1_armhf.deb
 995eacd80dd6c73a24dc99efa7f5af5c6e0b3fc9 13615 r-base_3.6.2.20200221-1_armhf.buildinfo
 1758b54598c3638e8590dcd7e5c564961850bc94 1958104 r-mathlib_3.6.2.20200221-1_armhf.deb
Checksums-Sha256:
 582890bde4be6e2d4b954c6d78aa6abc466009db6d0d9fa60672453ff479d583 6412028 r-base-core-dbg_3.6.2.20200221-1_armhf.deb
 01cbc9753e5bdf725c826a889d4c27d5d2de94732d93ddc9c0d4098f6147c24c 24330296 r-base-core_3.6.2.20200221-1_armhf.deb
 272306c5c7b839fa04cece2be5661b3440f1eafbb0c56e2dd2b77d286eba966c 13615 r-base_3.6.2.20200221-1_armhf.buildinfo
 7a765c1d9c6421d515a690e5e8840da6ac93f63e9010b751c2f8402a92b74c1f 1958104 r-mathlib_3.6.2.20200221-1_armhf.deb
Files:
 804ff91e8de8195e4238e975b6c87439 6412028 debug optional r-base-core-dbg_3.6.2.20200221-1_armhf.deb
 c27d780f680f4fc986830cc280bcce3e 24330296 gnu-r optional r-base-core_3.6.2.20200221-1_armhf.deb
 c5c57dab8c3df39f47b6e6cdfb5b10d3 13615 gnu-r optional r-base_3.6.2.20200221-1_armhf.buildinfo
 8820aadb6a52052e1eadfd54dd2cea11 1958104 gnu-r optional r-mathlib_3.6.2.20200221-1_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


r-base-core-dbg_3.6.2.20200221-1_armhf.deb
------------------------------------------

 new Debian package, version 2.0.
 size 6412028 bytes: control archive=2272 bytes.
    2584 bytes,    39 lines      control              
    2249 bytes,    22 lines      md5sums              
 Package: r-base-core-dbg
 Source: r-base
 Version: 3.6.2.20200221-1
 Architecture: armhf
 Maintainer: Dirk Eddelbuettel <edd@debian.org>
 Installed-Size: 6738
 Depends: r-base-core (= 3.6.2.20200221-1), r-base-dev (= 3.6.2.20200221-1)
 Section: debug
 Priority: optional
 Homepage: http://www.r-project.org/
 Description: GNU R debug symbols for statistical comp. language and environment
  R is a system for statistical computation and graphics.  It consists
  of a language plus a run-time environment with graphics, a debugger,
  access to certain system functions, and the ability to run programs
  stored in script files.
  .
  The design of R has been heavily influenced by two existing languages:
  Becker, Chambers & Wilks' S and Sussman's Scheme.  Whereas the
  resulting language is very similar in appearance to S, the underlying
  implementation and semantics are derived from Scheme.
  .
  The core of R is an interpreted computer language which allows
  branching and looping as well as modular programming using functions.
  Most of the user-visible functions in R are written in R.  It is
  possible for the user to interface to procedures written in the
  C, C++, or FORTRAN languages for efficiency, and many of R's core
  functions do so.  The R distribution contains functionality for a
  large number of statistical procedures and underlying applied math
  computations.  There is also a large set of functions which provide
  a flexible graphical environment for creating various kinds of data
  presentations.
  .
  Additionally, several thousand extension "packages" are available from
  CRAN, the Comprehensive R Archive Network, many also as Debian packages,
  named 'r-cran-<name>'.
  .
  This package contains debugging symbol tables for the binaries and dynamic
  libraries in the r-base-core package.
 Build-Ids: 0830d9db7e9dae2adf1f51d883e862414addd48b 24a5cad5e6bddf9a60923ceb9e18e2ffa40997f4 37b90d30d9933992316dbcc94aab61bba1701bf0 3d0a16cf565777653b93097c327e34579bceb713 465bbab624544583d2ddf94814e335e51901e382 7b0ed33c6e1cd5a7ff2f5cd9a7a853183f780fdb 7d834e84224acc0437822f6d7cb5ebf58d173a3c 8ae5730746b3199193d5d621c28ea2d8fe31b21f 8b4c5024000bcf836d50ba4fb0a16a7f690b540f 8cb7b3fa7a072e8068bf91aae256e4478d2c047e a6ed8056844156b0ee76d664938d178ea6ddc1f3 acb065ffdeefc5f94447c2f60bb5759ea06aa414 bf677d6b400f9ee905c1d360c5eaffacd2248495 c146b6c6bdbddf8c811d99e006c1686a2640a20f cc9612878450d355d02e035d4b387374b4c3f65a ccb4ee0a1ea7c7558c186d8f1080c81fefc6c0e7 e6a8a1c135435475917609d218642eab6561a711 f8f6fac8e4dfa7ce60f47dee022801800ea31b2f fc3675c2d0c53ee6bd06bd8c0e8d1015df741ddb

drwxr-xr-x root/root         0 2020-02-22 13:25 ./
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/08/
-rw-r--r-- root/root    113280 2020-02-22 13:25 ./usr/lib/debug/.build-id/08/30d9db7e9dae2adf1f51d883e862414addd48b.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/24/
-rw-r--r-- root/root    126396 2020-02-22 13:25 ./usr/lib/debug/.build-id/24/a5cad5e6bddf9a60923ceb9e18e2ffa40997f4.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/37/
-rw-r--r-- root/root    166944 2020-02-22 13:25 ./usr/lib/debug/.build-id/37/b90d30d9933992316dbcc94aab61bba1701bf0.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/3d/
-rw-r--r-- root/root     55116 2020-02-22 13:25 ./usr/lib/debug/.build-id/3d/0a16cf565777653b93097c327e34579bceb713.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/46/
-rw-r--r-- root/root      7096 2020-02-22 13:25 ./usr/lib/debug/.build-id/46/5bbab624544583d2ddf94814e335e51901e382.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/7b/
-rw-r--r-- root/root    257828 2020-02-22 13:25 ./usr/lib/debug/.build-id/7b/0ed33c6e1cd5a7ff2f5cd9a7a853183f780fdb.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/7d/
-rw-r--r-- root/root     55084 2020-02-22 13:25 ./usr/lib/debug/.build-id/7d/834e84224acc0437822f6d7cb5ebf58d173a3c.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/8a/
-rw-r--r-- root/root    369380 2020-02-22 13:25 ./usr/lib/debug/.build-id/8a/e5730746b3199193d5d621c28ea2d8fe31b21f.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/8b/
-rw-r--r-- root/root     76692 2020-02-22 13:25 ./usr/lib/debug/.build-id/8b/4c5024000bcf836d50ba4fb0a16a7f690b540f.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/8c/
-rw-r--r-- root/root     75220 2020-02-22 13:25 ./usr/lib/debug/.build-id/8c/b7b3fa7a072e8068bf91aae256e4478d2c047e.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/a6/
-rw-r--r-- root/root     68276 2020-02-22 13:25 ./usr/lib/debug/.build-id/a6/ed8056844156b0ee76d664938d178ea6ddc1f3.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/ac/
-rw-r--r-- root/root    145552 2020-02-22 13:25 ./usr/lib/debug/.build-id/ac/b065ffdeefc5f94447c2f60bb5759ea06aa414.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/bf/
-rw-r--r-- root/root     12344 2020-02-22 13:25 ./usr/lib/debug/.build-id/bf/677d6b400f9ee905c1d360c5eaffacd2248495.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/c1/
-rw-r--r-- root/root    765416 2020-02-22 13:25 ./usr/lib/debug/.build-id/c1/46b6c6bdbddf8c811d99e006c1686a2640a20f.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/cc/
-rw-r--r-- root/root    226736 2020-02-22 13:25 ./usr/lib/debug/.build-id/cc/9612878450d355d02e035d4b387374b4c3f65a.debug
-rw-r--r-- root/root    146448 2020-02-22 13:25 ./usr/lib/debug/.build-id/cc/b4ee0a1ea7c7558c186d8f1080c81fefc6c0e7.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/e6/
-rw-r--r-- root/root   3972240 2020-02-22 13:25 ./usr/lib/debug/.build-id/e6/a8a1c135435475917609d218642eab6561a711.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/f8/
-rw-r--r-- root/root     12476 2020-02-22 13:25 ./usr/lib/debug/.build-id/f8/f6fac8e4dfa7ce60f47dee022801800ea31b2f.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/debug/.build-id/fc/
-rw-r--r-- root/root     37960 2020-02-22 13:25 ./usr/lib/debug/.build-id/fc/3675c2d0c53ee6bd06bd8c0e8d1015df741ddb.debug
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/doc/r-base-core-dbg/
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/share/doc/r-base-core-dbg/NEWS.gz -> changelog.gz
-rw-r--r-- root/root     33103 2020-02-22 13:25 ./usr/share/doc/r-base-core-dbg/changelog.Debian.gz
-rw-r--r-- root/root    112234 2020-02-22 13:25 ./usr/share/doc/r-base-core-dbg/changelog.gz
-rw-r--r-- root/root     20761 2019-03-05 11:56 ./usr/share/doc/r-base-core-dbg/copyright
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/lintian/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/lintian/overrides/


r-base-core_3.6.2.20200221-1_armhf.deb
--------------------------------------

 new Debian package, version 2.0.
 size 24330296 bytes: control archive=23404 bytes.
      93 bytes,     5 lines      conffiles            
    3498 bytes,    45 lines      control              
   70799 bytes,   896 lines      md5sums              
    2424 bytes,    68 lines   *  postinst             #!/bin/sh
     205 bytes,     5 lines   *  postrm               #!/bin/sh
     855 bytes,    37 lines   *  preinst              #!/bin/sh
     877 bytes,    29 lines   *  prerm                #!/bin/sh
 Package: r-base-core
 Source: r-base
 Version: 3.6.2.20200221-1
 Architecture: armhf
 Maintainer: Dirk Eddelbuettel <edd@debian.org>
 Installed-Size: 37010
 Depends: zip, unzip, libpaper-utils, xdg-utils, libblas3 | libblas.so.3, libbz2-1.0, libc6 (>= 2.29), libcairo2 (>= 1.6.0), libcurl4 (>= 7.28.0), libglib2.0-0 (>= 2.12.0), libgomp1 (>= 4.9), libicu63 (>= 63.1-1~), libjpeg62-turbo (>= 1.3.1), liblapack3 | liblapack.so.3, liblzma5 (>= 5.1.1alpha+20120614), libpango-1.0-0 (>= 1.14.0), libpangocairo-1.0-0 (>= 1.14.0), libpcre3, libpng16-16 (>= 1.6.2-1), libreadline8 (>= 6.0), libtcl8.6 (>= 8.6.0), libtiff5 (>= 4.0.3), libtk8.6 (>= 8.6.0), libx11-6, libxt6, zlib1g (>= 1:1.1.4), ucf (>= 3.0), ca-certificates
 Recommends: r-recommended, r-base-dev, r-doc-html
 Suggests: elpa-ess, r-doc-info | r-doc-pdf, r-mathlib, r-base-html
 Conflicts: r-base-latex, r-cran-rcompgen, r-gnome
 Breaks: r-bioc-graph (<< 1.62.0-1~), r-cran-bbmle (<< 1.0.20-5~), r-cran-biocmanager (<< 1.30.4+dfsg-2~), r-cran-caret (<< 6.0-84-2~), r-cran-cmprsk (<< 2.2-8-1~), r-cran-coin (<< 1.3-0-1~), r-cran-dendextend (<< 1.12.0+dfsg-1~), r-cran-fields (<< 9.8-3-1~), r-cran-filehash (<< 2.4-2-2~), r-cran-future (<< 1.14.0+dfsg-1~), r-cran-genetics (<< 1.3.8.1.2-1~), r-cran-haplo.stats (<< 1.7.9-4~), r-cran-igraph (<< 1.2.4.1-1~), r-cran-lava (<< 1.6.5-1~), r-cran-libcoin (<< 1.0-4-1~), r-cran-msm (<< 1.6.7-1~), r-cran-permute (<< 0.9-5-1~), r-cran-phangorn (<< 2.5.5-1~), r-cran-popepi (<< 0.4.7-1~), r-cran-recipes (<< 0.1.6-1~), r-cran-sp (<< 1:1.3-1-2~), r-cran-spam (<< 2.2-2-1~), r-cran-units (<< 0.6-3-1~), r-cran-vegan (<< 2.5-5+dfsg-1~), r-cran-zelig (<< 5.1.6.1-1~)
 Replaces: r-base (<= 1.4.1-1), r-base-latex (<= 2.9.2-4), r-cran-rcompgen (<= 0.1-17-1), r-gnome (<= 2.3.1), r-recommended (<< 1.9.0)
 Provides: r-api-3.5, r-base-latex, r-cran-rcompgen, r-gnome
 Section: gnu-r
 Priority: optional
 Homepage: http://www.r-project.org/
 Description: GNU R core of statistical computation and graphics system
  R is a system for statistical computation and graphics.  It consists
  of a language plus a run-time environment with graphics, a debugger,
  access to certain system functions, and the ability to run programs
  stored in script files.
  .
  The design of R has been heavily influenced by two existing languages:
  Becker, Chambers & Wilks' S and Sussman's Scheme.  Whereas the
  resulting language is very similar in appearance to S, the underlying
  implementation and semantics are derived from Scheme.
  .
  The core of R is an interpreted computer language which allows
  branching and looping as well as modular programming using functions.
  Most of the user-visible functions in R are written in R.  It is
  possible for the user to interface to procedures written in the
  C, C++, or FORTRAN languages for efficiency, and many of R's core
  functions do so.  The R distribution contains functionality for a
  large number of statistical procedures and underlying applied math
  computations.  There is also a large set of functions which provide
  a flexible graphical environment for creating various kinds of data
  presentations.
  .
  Additionally, several thousand extension "packages" are available
  from CRAN, the Comprehensive R Archive Network, many also as Debian
  packages, named 'r-cran-<name>'.
  .
  This package provides the core GNU R system from which only the optional
  documentation packages r-base-html, r-doc-html, r-doc-pdf and r-doc-info
  have been split off to somewhat reduce the size of this package.

drwxr-xr-x root/root         0 2020-02-22 13:25 ./
drwxr-xr-x root/root         0 2020-02-22 13:25 ./etc/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./etc/R/
-rw-r--r-- root/root      8547 2020-02-22 13:25 ./etc/R/Makeconf
-rw-r--r-- root/root      1640 2020-02-22 13:25 ./etc/R/Renviron.site
-rw-r--r-- root/root       988 2020-02-22 13:25 ./etc/R/Rprofile.site
-rw-r--r-- root/root       789 2020-02-22 13:25 ./etc/R/ldpaths
-rw-r--r-- root/root      1095 2020-02-22 13:25 ./etc/R/repositories
drwxr-xr-x root/root         0 2020-02-22 13:25 ./etc/ld.so.conf.d/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/bin/
-rwxr-xr-x root/root      8818 2020-02-22 13:25 ./usr/bin/R
-rwxr-xr-x root/root      9784 2020-02-22 13:25 ./usr/bin/Rscript
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/lib/R/COPYING -> ../../share/common-licenses/GPL-2
-rw-r--r-- root/root        46 2020-02-22 13:25 ./usr/lib/R/SVN-REVISION
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/bin/
-rwxr-xr-x root/root      1837 2020-02-22 13:25 ./usr/lib/R/bin/BATCH
-rwxr-xr-x root/root      2168 2020-02-22 13:25 ./usr/lib/R/bin/COMPILE
-rwxr-xr-x root/root       823 2020-02-22 13:25 ./usr/lib/R/bin/INSTALL
-rwxr-xr-x root/root      1324 2020-02-22 13:25 ./usr/lib/R/bin/LINK
-rwxr-xr-x root/root      8818 2020-02-22 13:25 ./usr/lib/R/bin/R
-rwxr-xr-x root/root       158 2020-02-22 13:25 ./usr/lib/R/bin/REMOVE
-rwxr-xr-x root/root      1378 2020-02-22 13:25 ./usr/lib/R/bin/Rcmd
-rwxr-xr-x root/root       316 2020-02-22 13:25 ./usr/lib/R/bin/Rd2pdf
-rwxr-xr-x root/root       359 2020-02-22 13:25 ./usr/lib/R/bin/Rdconv
-rwxr-xr-x root/root       258 2020-02-22 13:25 ./usr/lib/R/bin/Rdiff
-rwxr-xr-x root/root       310 2020-02-22 13:25 ./usr/lib/R/bin/Rprof
-rwxr-xr-x root/root      9784 2020-02-22 13:25 ./usr/lib/R/bin/Rscript
-rwxr-xr-x root/root       155 2020-02-22 13:25 ./usr/lib/R/bin/SHLIB
-rwxr-xr-x root/root       318 2020-02-22 13:25 ./usr/lib/R/bin/Stangle
-rwxr-xr-x root/root       316 2020-02-22 13:25 ./usr/lib/R/bin/Sweave
-rwxr-xr-x root/root       350 2020-02-22 13:25 ./usr/lib/R/bin/build
-rwxr-xr-x root/root       317 2020-02-22 13:25 ./usr/lib/R/bin/check
-rwxr-xr-x root/root     11933 2020-02-22 13:25 ./usr/lib/R/bin/config
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/bin/exec/
-rwxr-xr-x root/root      5576 2020-02-22 13:25 ./usr/lib/R/bin/exec/R
-rwxr-xr-x root/root     14530 2020-02-22 13:25 ./usr/lib/R/bin/javareconf
-rwxr-xr-x root/root    350733 2020-02-22 13:25 ./usr/lib/R/bin/libtool
-rwxr-xr-x root/root      3496 2020-02-22 13:25 ./usr/lib/R/bin/mkinstalldirs
-rwxr-xr-x root/root       483 2020-02-22 13:25 ./usr/lib/R/bin/pager
-rwxr-xr-x root/root      4121 2020-02-22 13:25 ./usr/lib/R/bin/rtags
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/etc/
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/lib/R/etc/Makeconf -> /etc/R/Makeconf
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/lib/R/etc/Renviron -> /etc/R/Renviron
-rw-r--r-- root/root      1708 2020-02-22 13:25 ./usr/lib/R/etc/Renviron.orig
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/lib/R/etc/Renviron.site -> /etc/R/Renviron.site
-rw-r--r-- root/root      2011 2020-02-22 13:25 ./usr/lib/R/etc/Renviron.ucf
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/lib/R/etc/Rprofile.site -> /etc/R/Rprofile.site
-rw-r--r-- root/root       234 2020-02-22 13:25 ./usr/lib/R/etc/javaconf
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/lib/R/etc/ldpaths -> /etc/R/ldpaths
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/lib/R/etc/repositories -> /etc/R/repositories
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/lib/
-rw-r--r-- root/root   2834548 2020-02-22 13:25 ./usr/lib/R/lib/libR.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/base/
-rw-r--r-- root/root       956 2020-02-22 13:25 ./usr/lib/R/library/base/CITATION
-rw-r--r-- root/root       286 2020-02-22 13:25 ./usr/lib/R/library/base/DESCRIPTION
-rw-r--r-- root/root     23968 2020-02-22 13:25 ./usr/lib/R/library/base/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/base/Meta/
-rw-r--r-- root/root     21722 2020-02-22 13:25 ./usr/lib/R/library/base/Meta/Rd.rds
-rw-r--r-- root/root       266 2020-02-22 13:25 ./usr/lib/R/library/base/Meta/demo.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/base/Meta/features.rds
-rw-r--r-- root/root     22511 2020-02-22 13:25 ./usr/lib/R/library/base/Meta/hsearch.rds
-rw-r--r-- root/root     13024 2020-02-22 13:25 ./usr/lib/R/library/base/Meta/links.rds
-rw-r--r-- root/root       517 2020-02-22 13:25 ./usr/lib/R/library/base/Meta/package.rds
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/base/R/
-rw-r--r-- root/root      6074 2020-02-22 13:25 ./usr/lib/R/library/base/R/Rprofile
-rw-r--r-- root/root      5387 2020-02-22 13:25 ./usr/lib/R/library/base/R/base
-rw-r--r-- root/root   1027028 2020-02-22 13:25 ./usr/lib/R/library/base/R/base.rdb
-rw-r--r-- root/root     13449 2020-02-22 13:25 ./usr/lib/R/library/base/R/base.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/base/demo/
-rw-r--r-- root/root      1179 2020-02-22 13:25 ./usr/lib/R/library/base/demo/error.catching.R
-rw-r--r-- root/root      4798 2020-02-22 13:25 ./usr/lib/R/library/base/demo/is.things.R
-rw-r--r-- root/root      2115 2020-02-22 13:25 ./usr/lib/R/library/base/demo/recursion.R
-rw-r--r-- root/root      1560 2020-02-22 13:25 ./usr/lib/R/library/base/demo/scoping.R
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/base/help/
-rw-r--r-- root/root     33897 2020-02-22 13:25 ./usr/lib/R/library/base/help/AnIndex
-rw-r--r-- root/root     12139 2020-02-22 13:25 ./usr/lib/R/library/base/help/aliases.rds
-rw-r--r-- root/root   2172704 2020-02-22 13:25 ./usr/lib/R/library/base/help/base.rdb
-rw-r--r-- root/root      9002 2020-02-22 13:25 ./usr/lib/R/library/base/help/base.rdx
-rw-r--r-- root/root      3192 2020-02-22 13:25 ./usr/lib/R/library/base/help/paths.rds
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/base/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/compiler/
-rw-r--r-- root/root       283 2020-02-22 13:25 ./usr/lib/R/library/compiler/DESCRIPTION
-rw-r--r-- root/root        43 2020-02-22 13:25 ./usr/lib/R/library/compiler/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/compiler/Meta/
-rw-r--r-- root/root       321 2020-02-22 13:25 ./usr/lib/R/library/compiler/Meta/Rd.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/compiler/Meta/features.rds
-rw-r--r-- root/root       392 2020-02-22 13:25 ./usr/lib/R/library/compiler/Meta/hsearch.rds
-rw-r--r-- root/root       226 2020-02-22 13:25 ./usr/lib/R/library/compiler/Meta/links.rds
-rw-r--r-- root/root       274 2020-02-22 13:25 ./usr/lib/R/library/compiler/Meta/nsInfo.rds
-rw-r--r-- root/root       496 2020-02-22 13:25 ./usr/lib/R/library/compiler/Meta/package.rds
-rw-r--r-- root/root       127 2020-02-22 13:25 ./usr/lib/R/library/compiler/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/compiler/R/
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/compiler/R/compiler
-rw-r--r-- root/root    196779 2020-02-22 13:25 ./usr/lib/R/library/compiler/R/compiler.rdb
-rw-r--r-- root/root      3583 2020-02-22 13:25 ./usr/lib/R/library/compiler/R/compiler.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/compiler/help/
-rw-r--r-- root/root       174 2020-02-22 13:25 ./usr/lib/R/library/compiler/help/AnIndex
-rw-r--r-- root/root       162 2020-02-22 13:25 ./usr/lib/R/library/compiler/help/aliases.rds
-rw-r--r-- root/root      8688 2020-02-22 13:25 ./usr/lib/R/library/compiler/help/compiler.rdb
-rw-r--r-- root/root       166 2020-02-22 13:25 ./usr/lib/R/library/compiler/help/compiler.rdx
-rw-r--r-- root/root       150 2020-02-22 13:25 ./usr/lib/R/library/compiler/help/paths.rds
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/compiler/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/datasets/
-rw-r--r-- root/root       275 2020-02-22 13:25 ./usr/lib/R/library/datasets/DESCRIPTION
-rw-r--r-- root/root      5688 2020-02-22 13:25 ./usr/lib/R/library/datasets/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/datasets/Meta/
-rw-r--r-- root/root      3666 2020-02-22 13:25 ./usr/lib/R/library/datasets/Meta/Rd.rds
-rw-r--r-- root/root      2712 2020-02-22 13:25 ./usr/lib/R/library/datasets/Meta/data.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/datasets/Meta/features.rds
-rw-r--r-- root/root      3367 2020-02-22 13:25 ./usr/lib/R/library/datasets/Meta/hsearch.rds
-rw-r--r-- root/root      1412 2020-02-22 13:25 ./usr/lib/R/library/datasets/Meta/links.rds
-rw-r--r-- root/root       199 2020-02-22 13:25 ./usr/lib/R/library/datasets/Meta/nsInfo.rds
-rw-r--r-- root/root       489 2020-02-22 13:25 ./usr/lib/R/library/datasets/Meta/package.rds
-rw-r--r-- root/root        71 2020-02-22 13:25 ./usr/lib/R/library/datasets/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/datasets/data/
-rw-r--r-- root/root    116907 2020-02-22 13:25 ./usr/lib/R/library/datasets/data/Rdata.rdb
-rw-r--r-- root/root      1083 2020-02-22 13:25 ./usr/lib/R/library/datasets/data/Rdata.rds
-rw-r--r-- root/root      1553 2020-02-22 13:25 ./usr/lib/R/library/datasets/data/Rdata.rdx
-rw-r--r-- root/root      2122 2020-02-22 13:25 ./usr/lib/R/library/datasets/data/morley.tab
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/datasets/help/
-rw-r--r-- root/root      2036 2020-02-22 13:25 ./usr/lib/R/library/datasets/help/AnIndex
-rw-r--r-- root/root       958 2020-02-22 13:25 ./usr/lib/R/library/datasets/help/aliases.rds
-rw-r--r-- root/root    210138 2020-02-22 13:25 ./usr/lib/R/library/datasets/help/datasets.rdb
-rw-r--r-- root/root      2044 2020-02-22 13:25 ./usr/lib/R/library/datasets/help/datasets.rdx
-rw-r--r-- root/root       913 2020-02-22 13:25 ./usr/lib/R/library/datasets/help/paths.rds
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/datasets/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grDevices/
-rw-r--r-- root/root       420 2020-02-22 13:25 ./usr/lib/R/library/grDevices/DESCRIPTION
-rw-r--r-- root/root      4227 2020-02-22 13:25 ./usr/lib/R/library/grDevices/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grDevices/Meta/
-rw-r--r-- root/root      3263 2020-02-22 13:25 ./usr/lib/R/library/grDevices/Meta/Rd.rds
-rw-r--r-- root/root       151 2020-02-22 13:25 ./usr/lib/R/library/grDevices/Meta/demo.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/grDevices/Meta/features.rds
-rw-r--r-- root/root      3327 2020-02-22 13:25 ./usr/lib/R/library/grDevices/Meta/hsearch.rds
-rw-r--r-- root/root      1696 2020-02-22 13:25 ./usr/lib/R/library/grDevices/Meta/links.rds
-rw-r--r-- root/root      1160 2020-02-22 13:25 ./usr/lib/R/library/grDevices/Meta/nsInfo.rds
-rw-r--r-- root/root       596 2020-02-22 13:25 ./usr/lib/R/library/grDevices/Meta/package.rds
-rw-r--r-- root/root      2521 2020-02-22 13:25 ./usr/lib/R/library/grDevices/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grDevices/R/
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/grDevices/R/grDevices
-rw-r--r-- root/root    219377 2020-02-22 13:25 ./usr/lib/R/library/grDevices/R/grDevices.rdb
-rw-r--r-- root/root      2680 2020-02-22 13:25 ./usr/lib/R/library/grDevices/R/grDevices.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/
-rw-r--r-- root/root      8341 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/ArialMT-Bold.afm.gz
-rw-r--r-- root/root      8291 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/ArialMT-BoldItalic.afm.gz
-rw-r--r-- root/root      8343 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/ArialMT-Italic.afm.gz
-rw-r--r-- root/root      8556 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/ArialMT.afm.gz
-rw-r--r-- root/root      3037 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/CM_boldx_10.afm.gz
-rw-r--r-- root/root      3126 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/CM_boldx_italic_10.afm.gz
-rw-r--r-- root/root      3031 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/CM_italic_10.afm.gz
-rw-r--r-- root/root      2935 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/CM_regular_10.afm.gz
-rw-r--r-- root/root      2237 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/CM_symbol_10.afm.gz
-rw-r--r-- root/root      3967 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Courier-Bold.afm.gz
-rw-r--r-- root/root      4088 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Courier-BoldOblique.afm.gz
-rw-r--r-- root/root      4082 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Courier-Oblique.afm.gz
-rw-r--r-- root/root      3961 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Courier.afm.gz
-rw-r--r-- root/root     12984 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Helvetica-Bold.afm.gz
-rw-r--r-- root/root     13187 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Helvetica-BoldOblique.afm.gz
-rw-r--r-- root/root     13803 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Helvetica-Oblique.afm.gz
-rw-r--r-- root/root     13624 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Helvetica.afm.gz
-rw-r--r-- root/root      1001 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/MustRead.html
-rw-r--r-- root/root       851 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/README
-rw-r--r-- root/root      3432 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Symbol.afm.gz
-rw-r--r-- root/root     12314 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Times-Bold.afm.gz
-rw-r--r-- root/root     11690 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Times-BoldItalic.afm.gz
-rw-r--r-- root/root     12641 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Times-Italic.afm.gz
-rw-r--r-- root/root     11829 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/Times-Roman.afm.gz
-rw-r--r-- root/root      2527 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/ZapfDingbats.afm.gz
-rw-r--r-- root/root     10212 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/a010013l.afm.gz
-rw-r--r-- root/root     10035 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/a010015l.afm.gz
-rw-r--r-- root/root     10260 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/a010033l.afm.gz
-rw-r--r-- root/root     10177 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/a010035l.afm.gz
-rw-r--r-- root/root      4890 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/agd_____.afm.gz
-rw-r--r-- root/root      4965 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/agdo____.afm.gz
-rw-r--r-- root/root      5046 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/agw_____.afm.gz
-rw-r--r-- root/root      5126 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/agwo____.afm.gz
-rw-r--r-- root/root     10240 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/b018012l.afm.gz
-rw-r--r-- root/root     10074 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/b018015l.afm.gz
-rw-r--r-- root/root     10348 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/b018032l.afm.gz
-rw-r--r-- root/root     10346 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/b018035l.afm.gz
-rw-r--r-- root/root      4241 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/bkd_____.afm.gz
-rw-r--r-- root/root      4356 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/bkdi____.afm.gz
-rw-r--r-- root/root      4244 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/bkl_____.afm.gz
-rw-r--r-- root/root      4318 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/bkli____.afm.gz
-rw-r--r-- root/root     10330 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/c059013l.afm.gz
-rw-r--r-- root/root     10234 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/c059016l.afm.gz
-rw-r--r-- root/root     10527 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/c059033l.afm.gz
-rw-r--r-- root/root     10461 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/c059036l.afm.gz
-rw-r--r-- root/root      2924 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/cmbxti10.afm.gz
-rw-r--r-- root/root      2904 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/cmti10.afm.gz
-rw-r--r-- root/root      3960 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/cob_____.afm.gz
-rw-r--r-- root/root      4071 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/cobo____.afm.gz
-rw-r--r-- root/root      3959 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/com_____.afm.gz
-rw-r--r-- root/root      4079 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/coo_____.afm.gz
-rw-r--r-- root/root      4813 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/hv______.afm.gz
-rw-r--r-- root/root      4678 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/hvb_____.afm.gz
-rw-r--r-- root/root      4820 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/hvbo____.afm.gz
-rw-r--r-- root/root      4797 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/hvn_____.afm.gz
-rw-r--r-- root/root      4662 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/hvnb____.afm.gz
-rw-r--r-- root/root      4813 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/hvnbo___.afm.gz
-rw-r--r-- root/root      4950 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/hvno____.afm.gz
-rw-r--r-- root/root      4964 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/hvo_____.afm.gz
-rw-r--r-- root/root     10204 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n019003l.afm.gz
-rw-r--r-- root/root     10032 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n019004l.afm.gz
-rw-r--r-- root/root     10471 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n019023l.afm.gz
-rw-r--r-- root/root     10310 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n019024l.afm.gz
-rw-r--r-- root/root     10082 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n019043l.afm.gz
-rw-r--r-- root/root      9772 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n019044l.afm.gz
-rw-r--r-- root/root     10271 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n019063l.afm.gz
-rw-r--r-- root/root     10153 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n019064l.afm.gz
-rw-r--r-- root/root     10526 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n021003l.afm.gz
-rw-r--r-- root/root     10342 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n021004l.afm.gz
-rw-r--r-- root/root     10532 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n021023l.afm.gz
-rw-r--r-- root/root     10512 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n021024l.afm.gz
-rw-r--r-- root/root      5464 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n022003l.afm.gz
-rw-r--r-- root/root      5561 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n022004l.afm.gz
-rw-r--r-- root/root      5859 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n022023l.afm.gz
-rw-r--r-- root/root      5841 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/n022024l.afm.gz
-rw-r--r-- root/root      4268 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/ncb_____.afm.gz
-rw-r--r-- root/root      4908 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/ncbi____.afm.gz
-rw-r--r-- root/root      4506 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/nci_____.afm.gz
-rw-r--r-- root/root      4440 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/ncr_____.afm.gz
-rw-r--r-- root/root     10408 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/p052003l.afm.gz
-rw-r--r-- root/root     10217 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/p052004l.afm.gz
-rw-r--r-- root/root     10511 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/p052023l.afm.gz
-rw-r--r-- root/root     10268 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/p052024l.afm.gz
-rw-r--r-- root/root      4382 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/pob_____.afm.gz
-rw-r--r-- root/root      4419 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/pobi____.afm.gz
-rw-r--r-- root/root      4441 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/poi_____.afm.gz
-rw-r--r-- root/root      4473 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/por_____.afm.gz
-rw-r--r-- root/root      3370 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/s050000l.afm.gz
-rw-r--r-- root/root      3385 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/sy______.afm.gz
-rw-r--r-- root/root      4992 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/tib_____.afm.gz
-rw-r--r-- root/root      5089 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/tibi____.afm.gz
-rw-r--r-- root/root      5094 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/tii_____.afm.gz
-rw-r--r-- root/root      4970 2020-02-22 13:25 ./usr/lib/R/library/grDevices/afm/tir_____.afm.gz
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grDevices/demo/
-rw-r--r-- root/root      3757 2020-02-22 13:25 ./usr/lib/R/library/grDevices/demo/colors.R
-rw-r--r-- root/root      2588 2020-02-22 13:25 ./usr/lib/R/library/grDevices/demo/hclColors.R
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/
-rw-r--r-- root/root      2094 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/AdobeStd.enc
-rw-r--r-- root/root      2514 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/AdobeSym.enc
-rw-r--r-- root/root      2224 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/CP1250.enc
-rw-r--r-- root/root      2389 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/CP1251.enc
-rw-r--r-- root/root      2185 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/CP1253.enc
-rw-r--r-- root/root      2247 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/CP1257.enc
-rw-r--r-- root/root      2349 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/Cyrillic.enc
-rw-r--r-- root/root      2212 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/Greek.enc
-rw-r--r-- root/root      2213 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/ISOLatin1.enc
-rw-r--r-- root/root      2187 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/ISOLatin2.enc
-rw-r--r-- root/root      2272 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/ISOLatin7.enc
-rw-r--r-- root/root      2196 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/ISOLatin9.enc
-rw-r--r-- root/root      2290 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/KOI8-R.enc
-rw-r--r-- root/root      2308 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/KOI8-U.enc
-rw-r--r-- root/root      2262 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/MacRoman.enc
-rw-r--r-- root/root      2207 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/PDFDoc.enc
-rw-r--r-- root/root      2091 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/TeXtext.enc
-rw-r--r-- root/root      2311 2020-02-22 13:25 ./usr/lib/R/library/grDevices/enc/WinAnsi.enc
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grDevices/help/
-rw-r--r-- root/root      3186 2020-02-22 13:25 ./usr/lib/R/library/grDevices/help/AnIndex
-rw-r--r-- root/root      1418 2020-02-22 13:25 ./usr/lib/R/library/grDevices/help/aliases.rds
-rw-r--r-- root/root    378226 2020-02-22 13:25 ./usr/lib/R/library/grDevices/help/grDevices.rdb
-rw-r--r-- root/root      1687 2020-02-22 13:25 ./usr/lib/R/library/grDevices/help/grDevices.rdx
-rw-r--r-- root/root       766 2020-02-22 13:25 ./usr/lib/R/library/grDevices/help/paths.rds
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grDevices/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grDevices/icc/
-rw-r--r-- root/root      9521 2020-02-22 13:25 ./usr/lib/R/library/grDevices/icc/srgb
-rw-r--r-- root/root      2680 2020-02-22 13:25 ./usr/lib/R/library/grDevices/icc/srgb.flate
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grDevices/libs/
-rw-r--r-- root/root     30636 2020-02-22 13:25 ./usr/lib/R/library/grDevices/libs/cairo.so
-rw-r--r-- root/root    190572 2020-02-22 13:25 ./usr/lib/R/library/grDevices/libs/grDevices.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/graphics/
-rw-r--r-- root/root       357 2020-02-22 13:25 ./usr/lib/R/library/graphics/DESCRIPTION
-rw-r--r-- root/root      3773 2020-02-22 13:25 ./usr/lib/R/library/graphics/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/graphics/Meta/
-rw-r--r-- root/root      3200 2020-02-22 13:25 ./usr/lib/R/library/graphics/Meta/Rd.rds
-rw-r--r-- root/root       284 2020-02-22 13:25 ./usr/lib/R/library/graphics/Meta/demo.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/graphics/Meta/features.rds
-rw-r--r-- root/root      3256 2020-02-22 13:25 ./usr/lib/R/library/graphics/Meta/hsearch.rds
-rw-r--r-- root/root      1386 2020-02-22 13:25 ./usr/lib/R/library/graphics/Meta/links.rds
-rw-r--r-- root/root      1182 2020-02-22 13:25 ./usr/lib/R/library/graphics/Meta/nsInfo.rds
-rw-r--r-- root/root       572 2020-02-22 13:25 ./usr/lib/R/library/graphics/Meta/package.rds
-rw-r--r-- root/root      2804 2020-02-22 13:25 ./usr/lib/R/library/graphics/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/graphics/R/
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/graphics/R/graphics
-rw-r--r-- root/root    324841 2020-02-22 13:25 ./usr/lib/R/library/graphics/R/graphics.rdb
-rw-r--r-- root/root      1845 2020-02-22 13:25 ./usr/lib/R/library/graphics/R/graphics.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/graphics/demo/
-rw-r--r-- root/root     19972 2020-02-22 13:25 ./usr/lib/R/library/graphics/demo/Hershey.R
-rw-r--r-- root/root     34519 2020-02-22 13:25 ./usr/lib/R/library/graphics/demo/Japanese.R
-rw-r--r-- root/root      5039 2020-02-22 13:25 ./usr/lib/R/library/graphics/demo/graphics.R
-rw-r--r-- root/root      1105 2020-02-22 13:25 ./usr/lib/R/library/graphics/demo/image.R
-rw-r--r-- root/root      2791 2020-02-22 13:25 ./usr/lib/R/library/graphics/demo/persp.R
-rw-r--r-- root/root      8666 2020-02-22 13:25 ./usr/lib/R/library/graphics/demo/plotmath.R
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/
-rw-r--r-- root/root      2557 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/AnIndex
-rw-r--r-- root/root      1063 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/aliases.rds
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/figures/
-rw-r--r-- root/root      2541 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/figures/mai.pdf
-rw-r--r-- root/root      4667 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/figures/mai.png
-rw-r--r-- root/root      3763 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/figures/oma.pdf
-rw-r--r-- root/root      5114 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/figures/oma.png
-rw-r--r-- root/root      4994 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/figures/pch.pdf
-rw-r--r-- root/root      9287 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/figures/pch.png
-rw-r--r-- root/root     27187 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/figures/pch.svg
-rw-r--r-- root/root    477916 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/graphics.rdb
-rw-r--r-- root/root      1665 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/graphics.rdx
-rw-r--r-- root/root       704 2020-02-22 13:25 ./usr/lib/R/library/graphics/help/paths.rds
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/graphics/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/graphics/libs/
-rw-r--r-- root/root    251816 2020-02-22 13:25 ./usr/lib/R/library/graphics/libs/graphics.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grid/
-rw-r--r-- root/root       435 2020-02-22 13:25 ./usr/lib/R/library/grid/DESCRIPTION
-rw-r--r-- root/root      5090 2020-02-22 13:25 ./usr/lib/R/library/grid/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grid/Meta/
-rw-r--r-- root/root      3631 2020-02-22 13:25 ./usr/lib/R/library/grid/Meta/Rd.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/grid/Meta/features.rds
-rw-r--r-- root/root      3681 2020-02-22 13:25 ./usr/lib/R/library/grid/Meta/hsearch.rds
-rw-r--r-- root/root      2044 2020-02-22 13:25 ./usr/lib/R/library/grid/Meta/links.rds
-rw-r--r-- root/root      2202 2020-02-22 13:25 ./usr/lib/R/library/grid/Meta/nsInfo.rds
-rw-r--r-- root/root       659 2020-02-22 13:25 ./usr/lib/R/library/grid/Meta/package.rds
-rw-r--r-- root/root     13689 2020-02-22 13:25 ./usr/lib/R/library/grid/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grid/R/
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/grid/R/grid
-rw-r--r-- root/root    491448 2020-02-22 13:25 ./usr/lib/R/library/grid/R/grid.rdb
-rw-r--r-- root/root      8917 2020-02-22 13:25 ./usr/lib/R/library/grid/R/grid.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/
-rw-r--r-- root/root      2211 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/DivByZero.txt
-rw-r--r-- root/root     58184 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/changes.txt
-rw-r--r-- root/root    156885 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/displaylist.pdf
-rw-r--r-- root/root    155485 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/frame.pdf
-rw-r--r-- root/root    251175 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/grid.pdf
-rw-r--r-- root/root    106648 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/grobs.pdf
-rw-r--r-- root/root     90364 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/interactive.pdf
-rw-r--r-- root/root     89008 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/locndimn.pdf
-rw-r--r-- root/root     86752 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/moveline.pdf
-rw-r--r-- root/root     78991 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/nonfinite.pdf
-rw-r--r-- root/root    223170 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/plotexample.pdf
-rw-r--r-- root/root    121358 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/rotated.pdf
-rw-r--r-- root/root    133376 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/saveload.pdf
-rw-r--r-- root/root     70324 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/sharing.pdf
-rw-r--r-- root/root    162555 2020-02-22 13:25 ./usr/lib/R/library/grid/doc/viewports.pdf
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grid/help/
-rw-r--r-- root/root      5064 2020-02-22 13:25 ./usr/lib/R/library/grid/help/AnIndex
-rw-r--r-- root/root      1730 2020-02-22 13:25 ./usr/lib/R/library/grid/help/aliases.rds
-rw-r--r-- root/root    278993 2020-02-22 13:25 ./usr/lib/R/library/grid/help/grid.rdb
-rw-r--r-- root/root      2038 2020-02-22 13:25 ./usr/lib/R/library/grid/help/grid.rdx
-rw-r--r-- root/root       851 2020-02-22 13:25 ./usr/lib/R/library/grid/help/paths.rds
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grid/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/grid/libs/
-rw-r--r-- root/root     96108 2020-02-22 13:25 ./usr/lib/R/library/grid/libs/grid.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/methods/
-rw-r--r-- root/root       549 2020-02-22 13:25 ./usr/lib/R/library/methods/DESCRIPTION
-rw-r--r-- root/root      5203 2020-02-22 13:25 ./usr/lib/R/library/methods/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/methods/Meta/
-rw-r--r-- root/root      5783 2020-02-22 13:25 ./usr/lib/R/library/methods/Meta/Rd.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/methods/Meta/features.rds
-rw-r--r-- root/root      5954 2020-02-22 13:25 ./usr/lib/R/library/methods/Meta/hsearch.rds
-rw-r--r-- root/root      4094 2020-02-22 13:25 ./usr/lib/R/library/methods/Meta/links.rds
-rw-r--r-- root/root      1788 2020-02-22 13:25 ./usr/lib/R/library/methods/Meta/nsInfo.rds
-rw-r--r-- root/root       717 2020-02-22 13:25 ./usr/lib/R/library/methods/Meta/package.rds
-rw-r--r-- root/root      5567 2020-02-22 13:25 ./usr/lib/R/library/methods/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/methods/R/
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/methods/R/methods
-rw-r--r-- root/root   1305089 2020-02-22 13:25 ./usr/lib/R/library/methods/R/methods.rdb
-rw-r--r-- root/root     14518 2020-02-22 13:25 ./usr/lib/R/library/methods/R/methods.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/methods/help/
-rw-r--r-- root/root     14357 2020-02-22 13:25 ./usr/lib/R/library/methods/help/AnIndex
-rw-r--r-- root/root      4151 2020-02-22 13:25 ./usr/lib/R/library/methods/help/aliases.rds
-rw-r--r-- root/root    518905 2020-02-22 13:25 ./usr/lib/R/library/methods/help/methods.rdb
-rw-r--r-- root/root      2053 2020-02-22 13:25 ./usr/lib/R/library/methods/help/methods.rdx
-rw-r--r-- root/root       940 2020-02-22 13:25 ./usr/lib/R/library/methods/help/paths.rds
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/methods/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/methods/libs/
-rw-r--r-- root/root     30420 2020-02-22 13:25 ./usr/lib/R/library/methods/libs/methods.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/parallel/
-rw-r--r-- root/root       524 2020-02-22 13:25 ./usr/lib/R/library/parallel/DESCRIPTION
-rw-r--r-- root/root       914 2020-02-22 13:25 ./usr/lib/R/library/parallel/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/parallel/Meta/
-rw-r--r-- root/root       986 2020-02-22 13:25 ./usr/lib/R/library/parallel/Meta/Rd.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/parallel/Meta/features.rds
-rw-r--r-- root/root      1106 2020-02-22 13:25 ./usr/lib/R/library/parallel/Meta/hsearch.rds
-rw-r--r-- root/root       522 2020-02-22 13:25 ./usr/lib/R/library/parallel/Meta/links.rds
-rw-r--r-- root/root       650 2020-02-22 13:25 ./usr/lib/R/library/parallel/Meta/nsInfo.rds
-rw-r--r-- root/root       683 2020-02-22 13:25 ./usr/lib/R/library/parallel/Meta/package.rds
-rw-r--r-- root/root      1371 2020-02-22 13:25 ./usr/lib/R/library/parallel/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/parallel/R/
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/parallel/R/parallel
-rw-r--r-- root/root     97859 2020-02-22 13:25 ./usr/lib/R/library/parallel/R/parallel.rdb
-rw-r--r-- root/root      1807 2020-02-22 13:25 ./usr/lib/R/library/parallel/R/parallel.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/parallel/doc/
-rw-r--r-- root/root    295520 2020-02-22 13:25 ./usr/lib/R/library/parallel/doc/parallel.pdf
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/parallel/help/
-rw-r--r-- root/root      1053 2020-02-22 13:25 ./usr/lib/R/library/parallel/help/AnIndex
-rw-r--r-- root/root       468 2020-02-22 13:25 ./usr/lib/R/library/parallel/help/aliases.rds
-rw-r--r-- root/root     75259 2020-02-22 13:25 ./usr/lib/R/library/parallel/help/parallel.rdb
-rw-r--r-- root/root       456 2020-02-22 13:25 ./usr/lib/R/library/parallel/help/parallel.rdx
-rw-r--r-- root/root       282 2020-02-22 13:25 ./usr/lib/R/library/parallel/help/paths.rds
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/parallel/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/parallel/libs/
-rw-r--r-- root/root     22180 2020-02-22 13:25 ./usr/lib/R/library/parallel/libs/parallel.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/splines/
-rw-r--r-- root/root       465 2020-02-22 13:25 ./usr/lib/R/library/splines/DESCRIPTION
-rw-r--r-- root/root       832 2020-02-22 13:25 ./usr/lib/R/library/splines/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/splines/Meta/
-rw-r--r-- root/root       751 2020-02-22 13:25 ./usr/lib/R/library/splines/Meta/Rd.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/splines/Meta/features.rds
-rw-r--r-- root/root       825 2020-02-22 13:25 ./usr/lib/R/library/splines/Meta/hsearch.rds
-rw-r--r-- root/root       343 2020-02-22 13:25 ./usr/lib/R/library/splines/Meta/links.rds
-rw-r--r-- root/root       599 2020-02-22 13:25 ./usr/lib/R/library/splines/Meta/nsInfo.rds
-rw-r--r-- root/root       670 2020-02-22 13:25 ./usr/lib/R/library/splines/Meta/package.rds
-rw-r--r-- root/root      1425 2020-02-22 13:25 ./usr/lib/R/library/splines/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/splines/R/
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/splines/R/splines
-rw-r--r-- root/root     53701 2020-02-22 13:25 ./usr/lib/R/library/splines/R/splines.rdb
-rw-r--r-- root/root       824 2020-02-22 13:25 ./usr/lib/R/library/splines/R/splines.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/splines/help/
-rw-r--r-- root/root       541 2020-02-22 13:25 ./usr/lib/R/library/splines/help/AnIndex
-rw-r--r-- root/root       252 2020-02-22 13:25 ./usr/lib/R/library/splines/help/aliases.rds
-rw-r--r-- root/root       272 2020-02-22 13:25 ./usr/lib/R/library/splines/help/paths.rds
-rw-r--r-- root/root     40190 2020-02-22 13:25 ./usr/lib/R/library/splines/help/splines.rdb
-rw-r--r-- root/root       475 2020-02-22 13:25 ./usr/lib/R/library/splines/help/splines.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/splines/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/splines/libs/
-rw-r--r-- root/root      9648 2020-02-22 13:25 ./usr/lib/R/library/splines/libs/splines.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats/
-rw-r--r-- root/root      1552 2020-02-22 13:25 ./usr/lib/R/library/stats/COPYRIGHTS.modreg
-rw-r--r-- root/root       413 2020-02-22 13:25 ./usr/lib/R/library/stats/DESCRIPTION
-rw-r--r-- root/root     18782 2020-02-22 13:25 ./usr/lib/R/library/stats/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats/Meta/
-rw-r--r-- root/root     12843 2020-02-22 13:25 ./usr/lib/R/library/stats/Meta/Rd.rds
-rw-r--r-- root/root       285 2020-02-22 13:25 ./usr/lib/R/library/stats/Meta/demo.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/stats/Meta/features.rds
-rw-r--r-- root/root     13040 2020-02-22 13:25 ./usr/lib/R/library/stats/Meta/hsearch.rds
-rw-r--r-- root/root      6480 2020-02-22 13:25 ./usr/lib/R/library/stats/Meta/links.rds
-rw-r--r-- root/root      4425 2020-02-22 13:25 ./usr/lib/R/library/stats/Meta/nsInfo.rds
-rw-r--r-- root/root       680 2020-02-22 13:25 ./usr/lib/R/library/stats/Meta/package.rds
-rw-r--r-- root/root     16788 2020-02-22 13:25 ./usr/lib/R/library/stats/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats/R/
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/stats/R/stats
-rw-r--r-- root/root   1638882 2020-02-22 13:25 ./usr/lib/R/library/stats/R/stats.rdb
-rw-r--r-- root/root     10926 2020-02-22 13:25 ./usr/lib/R/library/stats/R/stats.rdx
-rw-r--r-- root/root       550 2020-02-22 13:25 ./usr/lib/R/library/stats/SOURCES.ts
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats/demo/
-rw-r--r-- root/root       744 2020-02-22 13:25 ./usr/lib/R/library/stats/demo/glm.vr.R
-rw-r--r-- root/root      4993 2020-02-22 13:25 ./usr/lib/R/library/stats/demo/lm.glm.R
-rw-r--r-- root/root      3250 2020-02-22 13:25 ./usr/lib/R/library/stats/demo/nlm.R
-rw-r--r-- root/root      1282 2020-02-22 13:25 ./usr/lib/R/library/stats/demo/smooth.R
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats/help/
-rw-r--r-- root/root     16076 2020-02-22 13:25 ./usr/lib/R/library/stats/help/AnIndex
-rw-r--r-- root/root      5398 2020-02-22 13:25 ./usr/lib/R/library/stats/help/aliases.rds
-rw-r--r-- root/root      2427 2020-02-22 13:25 ./usr/lib/R/library/stats/help/paths.rds
-rw-r--r-- root/root   1557243 2020-02-22 13:25 ./usr/lib/R/library/stats/help/stats.rdb
-rw-r--r-- root/root      6527 2020-02-22 13:25 ./usr/lib/R/library/stats/help/stats.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats/libs/
-rw-r--r-- root/root    570168 2020-02-22 13:25 ./usr/lib/R/library/stats/libs/stats.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats4/
-rw-r--r-- root/root       346 2020-02-22 13:25 ./usr/lib/R/library/stats4/DESCRIPTION
-rw-r--r-- root/root      1215 2020-02-22 13:25 ./usr/lib/R/library/stats4/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats4/Meta/
-rw-r--r-- root/root       809 2020-02-22 13:25 ./usr/lib/R/library/stats4/Meta/Rd.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/stats4/Meta/features.rds
-rw-r--r-- root/root       922 2020-02-22 13:25 ./usr/lib/R/library/stats4/Meta/hsearch.rds
-rw-r--r-- root/root       441 2020-02-22 13:25 ./usr/lib/R/library/stats4/Meta/links.rds
-rw-r--r-- root/root       436 2020-02-22 13:25 ./usr/lib/R/library/stats4/Meta/nsInfo.rds
-rw-r--r-- root/root       570 2020-02-22 13:25 ./usr/lib/R/library/stats4/Meta/package.rds
-rw-r--r-- root/root       694 2020-02-22 13:25 ./usr/lib/R/library/stats4/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats4/R/
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/stats4/R/stats4
-rw-r--r-- root/root    113310 2020-02-22 13:25 ./usr/lib/R/library/stats4/R/stats4.rdb
-rw-r--r-- root/root      1096 2020-02-22 13:25 ./usr/lib/R/library/stats4/R/stats4.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats4/help/
-rw-r--r-- root/root      1120 2020-02-22 13:25 ./usr/lib/R/library/stats4/help/AnIndex
-rw-r--r-- root/root       370 2020-02-22 13:25 ./usr/lib/R/library/stats4/help/aliases.rds
-rw-r--r-- root/root       277 2020-02-22 13:25 ./usr/lib/R/library/stats4/help/paths.rds
-rw-r--r-- root/root     31200 2020-02-22 13:25 ./usr/lib/R/library/stats4/help/stats4.rdb
-rw-r--r-- root/root       473 2020-02-22 13:25 ./usr/lib/R/library/stats4/help/stats4.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/stats4/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tcltk/
-rw-r--r-- root/root       342 2020-02-22 13:25 ./usr/lib/R/library/tcltk/DESCRIPTION
-rw-r--r-- root/root       626 2020-02-22 13:25 ./usr/lib/R/library/tcltk/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tcltk/Meta/
-rw-r--r-- root/root      2397 2020-02-22 13:25 ./usr/lib/R/library/tcltk/Meta/Rd.rds
-rw-r--r-- root/root       286 2020-02-22 13:25 ./usr/lib/R/library/tcltk/Meta/demo.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/tcltk/Meta/features.rds
-rw-r--r-- root/root      2552 2020-02-22 13:25 ./usr/lib/R/library/tcltk/Meta/hsearch.rds
-rw-r--r-- root/root      2134 2020-02-22 13:25 ./usr/lib/R/library/tcltk/Meta/links.rds
-rw-r--r-- root/root       482 2020-02-22 13:25 ./usr/lib/R/library/tcltk/Meta/nsInfo.rds
-rw-r--r-- root/root       563 2020-02-22 13:25 ./usr/lib/R/library/tcltk/Meta/package.rds
-rw-r--r-- root/root       980 2020-02-22 13:25 ./usr/lib/R/library/tcltk/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tcltk/R/
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/tcltk/R/tcltk
-rw-r--r-- root/root    101678 2020-02-22 13:25 ./usr/lib/R/library/tcltk/R/tcltk.rdb
-rw-r--r-- root/root      3497 2020-02-22 13:25 ./usr/lib/R/library/tcltk/R/tcltk.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tcltk/demo/
-rw-r--r-- root/root      5228 2020-02-22 13:25 ./usr/lib/R/library/tcltk/demo/tkcanvas.R
-rw-r--r-- root/root      3476 2020-02-22 13:25 ./usr/lib/R/library/tcltk/demo/tkdensity.R
-rw-r--r-- root/root      1229 2020-02-22 13:25 ./usr/lib/R/library/tcltk/demo/tkfaq.R
-rw-r--r-- root/root      2975 2020-02-22 13:25 ./usr/lib/R/library/tcltk/demo/tkttest.R
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/
-rw-r--r-- root/root       949 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/Tk-frontend.R
-rw-r--r-- root/root      2235 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/console.tcl
-rw-r--r-- root/root     39160 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/hierarchy.tcl
-rw-r--r-- root/root      1343 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/pkgIndex.tcl
-rw-r--r-- root/root     78634 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/progressbar.tcl
-rw-r--r-- root/root     17830 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/util-dump.tcl
-rw-r--r-- root/root      5753 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/util-expand.tcl
-rw-r--r-- root/root      2115 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/util-number.tcl
-rw-r--r-- root/root      3600 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/util-string.tcl
-rw-r--r-- root/root      7157 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/util-tk.tcl
-rw-r--r-- root/root     23267 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/util.tcl
-rw-r--r-- root/root     32703 2020-02-22 13:25 ./usr/lib/R/library/tcltk/exec/widget.tcl
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tcltk/help/
-rw-r--r-- root/root      7436 2020-02-22 13:25 ./usr/lib/R/library/tcltk/help/AnIndex
-rw-r--r-- root/root      2130 2020-02-22 13:25 ./usr/lib/R/library/tcltk/help/aliases.rds
-rw-r--r-- root/root       299 2020-02-22 13:25 ./usr/lib/R/library/tcltk/help/paths.rds
-rw-r--r-- root/root     51667 2020-02-22 13:25 ./usr/lib/R/library/tcltk/help/tcltk.rdb
-rw-r--r-- root/root       513 2020-02-22 13:25 ./usr/lib/R/library/tcltk/help/tcltk.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tcltk/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tcltk/libs/
-rw-r--r-- root/root     26404 2020-02-22 13:25 ./usr/lib/R/library/tcltk/libs/tcltk.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tools/
-rw-r--r-- root/root       402 2020-02-22 13:25 ./usr/lib/R/library/tools/DESCRIPTION
-rw-r--r-- root/root      3785 2020-02-22 13:25 ./usr/lib/R/library/tools/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tools/Meta/
-rw-r--r-- root/root      3260 2020-02-22 13:25 ./usr/lib/R/library/tools/Meta/Rd.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/tools/Meta/features.rds
-rw-r--r-- root/root      3285 2020-02-22 13:25 ./usr/lib/R/library/tools/Meta/hsearch.rds
-rw-r--r-- root/root      1784 2020-02-22 13:25 ./usr/lib/R/library/tools/Meta/links.rds
-rw-r--r-- root/root      1823 2020-02-22 13:25 ./usr/lib/R/library/tools/Meta/nsInfo.rds
-rw-r--r-- root/root       632 2020-02-22 13:25 ./usr/lib/R/library/tools/Meta/package.rds
-rw-r--r-- root/root      7602 2020-02-22 13:25 ./usr/lib/R/library/tools/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tools/R/
-rw-r--r-- root/root      8313 2020-02-22 13:25 ./usr/lib/R/library/tools/R/sysdata.rdb
-rw-r--r-- root/root       213 2020-02-22 13:25 ./usr/lib/R/library/tools/R/sysdata.rdx
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/tools/R/tools
-rw-r--r-- root/root   1873944 2020-02-22 13:25 ./usr/lib/R/library/tools/R/tools.rdb
-rw-r--r-- root/root     10954 2020-02-22 13:25 ./usr/lib/R/library/tools/R/tools.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tools/help/
-rw-r--r-- root/root      3788 2020-02-22 13:25 ./usr/lib/R/library/tools/help/AnIndex
-rw-r--r-- root/root      1550 2020-02-22 13:25 ./usr/lib/R/library/tools/help/aliases.rds
-rw-r--r-- root/root       823 2020-02-22 13:25 ./usr/lib/R/library/tools/help/paths.rds
-rw-r--r-- root/root    243577 2020-02-22 13:25 ./usr/lib/R/library/tools/help/tools.rdb
-rw-r--r-- root/root      1684 2020-02-22 13:25 ./usr/lib/R/library/tools/help/tools.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tools/html/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/tools/libs/
-rw-r--r-- root/root     79764 2020-02-22 13:25 ./usr/lib/R/library/tools/libs/tools.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/
-rw-r--r-- root/root       238 2020-02-22 13:25 ./usr/lib/R/library/translations/DESCRIPTION
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/da/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/
-rw-r--r-- root/root     53685 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      3227 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-compiler.mo
-rw-r--r-- root/root     10085 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root      1247 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-graphics.mo
-rw-r--r-- root/root      1247 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-grid.mo
-rw-r--r-- root/root      1335 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-methods.mo
-rw-r--r-- root/root      2626 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-parallel.mo
-rw-r--r-- root/root      2113 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-splines.mo
-rw-r--r-- root/root      4480 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1279 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root      2168 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-tcltk.mo
-rw-r--r-- root/root      5905 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root      4964 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root     48915 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/R.mo
-rw-r--r-- root/root     20034 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root      9186 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/grDevices.mo
-rw-r--r-- root/root       583 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/graphics.mo
-rw-r--r-- root/root       843 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/grid.mo
-rw-r--r-- root/root      4281 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/methods.mo
-rw-r--r-- root/root      1484 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/parallel.mo
-rw-r--r-- root/root       552 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/splines.mo
-rw-r--r-- root/root      6180 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/stats.mo
-rw-r--r-- root/root      1272 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/tcltk.mo
-rw-r--r-- root/root       969 2020-02-22 13:25 ./usr/lib/R/library/translations/da/LC_MESSAGES/tools.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/de/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/
-rw-r--r-- root/root     53834 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      3573 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-compiler.mo
-rw-r--r-- root/root     13424 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root     15442 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-graphics.mo
-rw-r--r-- root/root     17066 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-grid.mo
-rw-r--r-- root/root     68155 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-methods.mo
-rw-r--r-- root/root      3811 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-parallel.mo
-rw-r--r-- root/root      2612 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-splines.mo
-rw-r--r-- root/root     86428 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1294 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root      2238 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-tcltk.mo
-rw-r--r-- root/root     44798 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root     40881 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root    163281 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/R.mo
-rw-r--r-- root/root     20402 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root     16772 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/grDevices.mo
-rw-r--r-- root/root     12038 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/graphics.mo
-rw-r--r-- root/root      2751 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/grid.mo
-rw-r--r-- root/root      5251 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/methods.mo
-rw-r--r-- root/root      2083 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/parallel.mo
-rw-r--r-- root/root       560 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/splines.mo
-rw-r--r-- root/root     18919 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/stats.mo
-rw-r--r-- root/root      1310 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/tcltk.mo
-rw-r--r-- root/root      3614 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/tools.mo
-rw-r--r-- root/root      5352 2020-02-22 13:25 ./usr/lib/R/library/translations/de/LC_MESSAGES/utils.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/en/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/en/LC_MESSAGES/
-rw-r--r-- root/root       831 2020-02-22 13:25 ./usr/lib/R/library/translations/en/LC_MESSAGES/R.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/
-rw-r--r-- root/root     53797 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      3475 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-compiler.mo
-rw-r--r-- root/root     12779 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root     14883 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-graphics.mo
-rw-r--r-- root/root     16431 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-grid.mo
-rw-r--r-- root/root     65181 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-methods.mo
-rw-r--r-- root/root      3611 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-parallel.mo
-rw-r--r-- root/root      2491 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-splines.mo
-rw-r--r-- root/root     83649 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1207 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root      2149 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-tcltk.mo
-rw-r--r-- root/root     42929 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root     39471 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root    155793 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/R.mo
-rw-r--r-- root/root     15711 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/grDevices.mo
-rw-r--r-- root/root     11573 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/graphics.mo
-rw-r--r-- root/root      2563 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/grid.mo
-rw-r--r-- root/root      4943 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/methods.mo
-rw-r--r-- root/root      1959 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/parallel.mo
-rw-r--r-- root/root       509 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/splines.mo
-rw-r--r-- root/root     18097 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/stats.mo
-rw-r--r-- root/root      1217 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/tcltk.mo
-rw-r--r-- root/root      3427 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/tools.mo
-rw-r--r-- root/root      5127 2020-02-22 13:25 ./usr/lib/R/library/translations/en@quot/LC_MESSAGES/utils.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/en_GB/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/en_GB/LC_MESSAGES/
-rw-r--r-- root/root       396 2020-02-22 13:25 ./usr/lib/R/library/translations/en_GB/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root       956 2020-02-22 13:25 ./usr/lib/R/library/translations/en_GB/LC_MESSAGES/R.mo
-rw-r--r-- root/root      1166 2020-02-22 13:25 ./usr/lib/R/library/translations/en_GB/LC_MESSAGES/grDevices.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/es/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/es/LC_MESSAGES/
-rw-r--r-- root/root    115265 2020-02-22 13:25 ./usr/lib/R/library/translations/es/LC_MESSAGES/R.mo
-rw-r--r-- root/root     20799 2020-02-22 13:25 ./usr/lib/R/library/translations/es/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root      9207 2020-02-22 13:25 ./usr/lib/R/library/translations/es/LC_MESSAGES/graphics.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/fa/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/fa/LC_MESSAGES/
-rw-r--r-- root/root       553 2020-02-22 13:25 ./usr/lib/R/library/translations/fa/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      1656 2020-02-22 13:25 ./usr/lib/R/library/translations/fa/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root      2208 2020-02-22 13:25 ./usr/lib/R/library/translations/fa/LC_MESSAGES/R.mo
-rw-r--r-- root/root     26917 2020-02-22 13:25 ./usr/lib/R/library/translations/fa/LC_MESSAGES/RGui.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/
-rw-r--r-- root/root     56369 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      3787 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-compiler.mo
-rw-r--r-- root/root     13692 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root     15574 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-graphics.mo
-rw-r--r-- root/root     17309 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-grid.mo
-rw-r--r-- root/root     70340 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-methods.mo
-rw-r--r-- root/root      3951 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-parallel.mo
-rw-r--r-- root/root      2693 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-splines.mo
-rw-r--r-- root/root     87517 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1395 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root      2390 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-tcltk.mo
-rw-r--r-- root/root     43361 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root     40140 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root    164302 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/R.mo
-rw-r--r-- root/root     21274 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root     17092 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/grDevices.mo
-rw-r--r-- root/root     12487 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/graphics.mo
-rw-r--r-- root/root      2844 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/grid.mo
-rw-r--r-- root/root      5603 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/methods.mo
-rw-r--r-- root/root      2208 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/parallel.mo
-rw-r--r-- root/root       582 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/splines.mo
-rw-r--r-- root/root     18825 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/stats.mo
-rw-r--r-- root/root      1407 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/tcltk.mo
-rw-r--r-- root/root      3818 2020-02-22 13:25 ./usr/lib/R/library/translations/fr/LC_MESSAGES/tools.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/it/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/
-rw-r--r-- root/root     19901 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      5783 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root      8966 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/R-graphics.mo
-rw-r--r-- root/root     53920 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1269 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root       916 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/R-tcltk.mo
-rw-r--r-- root/root      5128 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root     85043 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/R.mo
-rw-r--r-- root/root     18580 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root      4616 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/grDevices.mo
-rw-r--r-- root/root      8747 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/graphics.mo
-rw-r--r-- root/root       566 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/grid.mo
-rw-r--r-- root/root     11776 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/stats.mo
-rw-r--r-- root/root       661 2020-02-22 13:25 ./usr/lib/R/library/translations/it/LC_MESSAGES/tools.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/
-rw-r--r-- root/root     64468 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      4364 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-compiler.mo
-rw-r--r-- root/root     15549 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root     17888 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-graphics.mo
-rw-r--r-- root/root     19961 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-grid.mo
-rw-r--r-- root/root     77674 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-methods.mo
-rw-r--r-- root/root      3174 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-splines.mo
-rw-r--r-- root/root     99101 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1492 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root      2733 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-tcltk.mo
-rw-r--r-- root/root     52810 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root     47232 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root    190790 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/R.mo
-rw-r--r-- root/root     23920 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root     19889 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/grDevices.mo
-rw-r--r-- root/root     13936 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/graphics.mo
-rw-r--r-- root/root      3230 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/grid.mo
-rw-r--r-- root/root      6020 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/methods.mo
-rw-r--r-- root/root       527 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/splines.mo
-rw-r--r-- root/root     21515 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/stats.mo
-rw-r--r-- root/root      1435 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/tcltk.mo
-rw-r--r-- root/root      4153 2020-02-22 13:25 ./usr/lib/R/library/translations/ja/LC_MESSAGES/tools.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/
-rw-r--r-- root/root     43665 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      2408 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-compiler.mo
-rw-r--r-- root/root     13770 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root     16151 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-graphics.mo
-rw-r--r-- root/root     16837 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-grid.mo
-rw-r--r-- root/root     58582 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-methods.mo
-rw-r--r-- root/root      4261 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-parallel.mo
-rw-r--r-- root/root      3039 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-splines.mo
-rw-r--r-- root/root     81831 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1407 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root      2530 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-tcltk.mo
-rw-r--r-- root/root     41387 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root     42915 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root    160357 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/R.mo
-rw-r--r-- root/root     23304 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root     18059 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/grDevices.mo
-rw-r--r-- root/root     12714 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/graphics.mo
-rw-r--r-- root/root      3055 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/grid.mo
-rw-r--r-- root/root      5773 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/methods.mo
-rw-r--r-- root/root      2363 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/parallel.mo
-rw-r--r-- root/root       561 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/splines.mo
-rw-r--r-- root/root     19503 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/stats.mo
-rw-r--r-- root/root      1489 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/tcltk.mo
-rw-r--r-- root/root      3722 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/tools.mo
-rw-r--r-- root/root      5663 2020-02-22 13:25 ./usr/lib/R/library/translations/ko/LC_MESSAGES/utils.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/nn/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/nn/LC_MESSAGES/
-rw-r--r-- root/root     39889 2020-02-22 13:25 ./usr/lib/R/library/translations/nn/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root    125529 2020-02-22 13:25 ./usr/lib/R/library/translations/nn/LC_MESSAGES/R.mo
-rw-r--r-- root/root     20215 2020-02-22 13:25 ./usr/lib/R/library/translations/nn/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root      9530 2020-02-22 13:25 ./usr/lib/R/library/translations/nn/LC_MESSAGES/graphics.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/
-rw-r--r-- root/root     60387 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      4009 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-compiler.mo
-rw-r--r-- root/root     14367 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root     16206 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-graphics.mo
-rw-r--r-- root/root     18066 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-grid.mo
-rw-r--r-- root/root     68446 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-methods.mo
-rw-r--r-- root/root      4251 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-parallel.mo
-rw-r--r-- root/root      2789 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-splines.mo
-rw-r--r-- root/root     92991 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1517 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root      2476 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-tcltk.mo
-rw-r--r-- root/root     48061 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root     43535 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root    168695 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/R.mo
-rw-r--r-- root/root     20979 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root     17327 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/grDevices.mo
-rw-r--r-- root/root     12703 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/graphics.mo
-rw-r--r-- root/root      2975 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/grid.mo
-rw-r--r-- root/root      5275 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/methods.mo
-rw-r--r-- root/root      2301 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/parallel.mo
-rw-r--r-- root/root       721 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/splines.mo
-rw-r--r-- root/root     19747 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/stats.mo
-rw-r--r-- root/root      1480 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/tcltk.mo
-rw-r--r-- root/root      3886 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/tools.mo
-rw-r--r-- root/root      5708 2020-02-22 13:25 ./usr/lib/R/library/translations/pl/LC_MESSAGES/utils.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/
-rw-r--r-- root/root     32403 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      3553 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-compiler.mo
-rw-r--r-- root/root      9668 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root     12405 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-graphics.mo
-rw-r--r-- root/root      5041 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-grid.mo
-rw-r--r-- root/root      5106 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-methods.mo
-rw-r--r-- root/root      2244 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-splines.mo
-rw-r--r-- root/root     49188 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1354 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root      2325 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-tcltk.mo
-rw-r--r-- root/root      2111 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root      1218 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root    131859 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/R.mo
-rw-r--r-- root/root     20729 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root      2529 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/grDevices.mo
-rw-r--r-- root/root     10057 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/graphics.mo
-rw-r--r-- root/root       957 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/grid.mo
-rw-r--r-- root/root      4679 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/methods.mo
-rw-r--r-- root/root       634 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/splines.mo
-rw-r--r-- root/root     16935 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/stats.mo
-rw-r--r-- root/root      1370 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/tcltk.mo
-rw-r--r-- root/root       814 2020-02-22 13:25 ./usr/lib/R/library/translations/pt_BR/LC_MESSAGES/tools.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/
-rw-r--r-- root/root     54805 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      4936 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-compiler.mo
-rw-r--r-- root/root     13627 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root     15532 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-graphics.mo
-rw-r--r-- root/root     16692 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-grid.mo
-rw-r--r-- root/root     65961 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-methods.mo
-rw-r--r-- root/root      3908 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-parallel.mo
-rw-r--r-- root/root      2662 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-splines.mo
-rw-r--r-- root/root     86604 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1449 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root      2334 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-tcltk.mo
-rw-r--r-- root/root     44414 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root     40653 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root    209653 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/R.mo
-rw-r--r-- root/root     20225 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root     16327 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/grDevices.mo
-rw-r--r-- root/root     15753 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/graphics.mo
-rw-r--r-- root/root      2788 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/grid.mo
-rw-r--r-- root/root      5072 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/methods.mo
-rw-r--r-- root/root      2134 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/parallel.mo
-rw-r--r-- root/root       605 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/splines.mo
-rw-r--r-- root/root     18617 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/stats.mo
-rw-r--r-- root/root      1376 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/tcltk.mo
-rw-r--r-- root/root      3675 2020-02-22 13:25 ./usr/lib/R/library/translations/ru/LC_MESSAGES/tools.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/tr/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/tr/LC_MESSAGES/
-rw-r--r-- root/root       790 2020-02-22 13:25 ./usr/lib/R/library/translations/tr/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root     34017 2020-02-22 13:25 ./usr/lib/R/library/translations/tr/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1275 2020-02-22 13:25 ./usr/lib/R/library/translations/tr/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root       522 2020-02-22 13:25 ./usr/lib/R/library/translations/tr/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root       941 2020-02-22 13:25 ./usr/lib/R/library/translations/tr/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root    124265 2020-02-22 13:25 ./usr/lib/R/library/translations/tr/LC_MESSAGES/R.mo
-rw-r--r-- root/root     20684 2020-02-22 13:25 ./usr/lib/R/library/translations/tr/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root      9716 2020-02-22 13:25 ./usr/lib/R/library/translations/tr/LC_MESSAGES/graphics.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/
-rw-r--r-- root/root     47656 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-base.mo
-rw-r--r-- root/root      3209 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-compiler.mo
-rw-r--r-- root/root     11427 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-grDevices.mo
-rw-r--r-- root/root     13590 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-graphics.mo
-rw-r--r-- root/root     14655 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-grid.mo
-rw-r--r-- root/root     58897 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-methods.mo
-rw-r--r-- root/root      3325 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-parallel.mo
-rw-r--r-- root/root      2390 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-splines.mo
-rw-r--r-- root/root     74985 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-stats.mo
-rw-r--r-- root/root      1204 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-stats4.mo
-rw-r--r-- root/root      2112 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-tcltk.mo
-rw-r--r-- root/root     30817 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-tools.mo
-rw-r--r-- root/root     34114 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R-utils.mo
-rw-r--r-- root/root    139868 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/R.mo
-rw-r--r-- root/root     17418 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root     14498 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/grDevices.mo
-rw-r--r-- root/root     10701 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/graphics.mo
-rw-r--r-- root/root      2362 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/grid.mo
-rw-r--r-- root/root      4726 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/methods.mo
-rw-r--r-- root/root      1909 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/parallel.mo
-rw-r--r-- root/root       501 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/splines.mo
-rw-r--r-- root/root     16194 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/stats.mo
-rw-r--r-- root/root      1220 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/tcltk.mo
-rw-r--r-- root/root      3227 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_CN/LC_MESSAGES/tools.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_TW/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_TW/LC_MESSAGES/
-rw-r--r-- root/root    125530 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_TW/LC_MESSAGES/R.mo
-rw-r--r-- root/root     17721 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_TW/LC_MESSAGES/RGui.mo
-rw-r--r-- root/root      9112 2020-02-22 13:25 ./usr/lib/R/library/translations/zh_TW/LC_MESSAGES/graphics.mo
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/utils/
-rw-r--r-- root/root       358 2020-02-22 13:25 ./usr/lib/R/library/utils/DESCRIPTION
-rw-r--r-- root/root      9149 2020-02-22 13:25 ./usr/lib/R/library/utils/INDEX
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/utils/Meta/
-rw-r--r-- root/root      6936 2020-02-22 13:25 ./usr/lib/R/library/utils/Meta/Rd.rds
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/lib/R/library/utils/Meta/features.rds
-rw-r--r-- root/root      6964 2020-02-22 13:25 ./usr/lib/R/library/utils/Meta/hsearch.rds
-rw-r--r-- root/root      3633 2020-02-22 13:25 ./usr/lib/R/library/utils/Meta/links.rds
-rw-r--r-- root/root      2300 2020-02-22 13:25 ./usr/lib/R/library/utils/Meta/nsInfo.rds
-rw-r--r-- root/root       601 2020-02-22 13:25 ./usr/lib/R/library/utils/Meta/package.rds
-rw-r--r-- root/root      7043 2020-02-22 13:25 ./usr/lib/R/library/utils/NAMESPACE
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/utils/R/
-rw-r--r-- root/root     14347 2020-02-22 13:25 ./usr/lib/R/library/utils/R/sysdata.rdb
-rw-r--r-- root/root       193 2020-02-22 13:25 ./usr/lib/R/library/utils/R/sysdata.rdx
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/lib/R/library/utils/R/utils
-rw-r--r-- root/root    923724 2020-02-22 13:25 ./usr/lib/R/library/utils/R/utils.rdb
-rw-r--r-- root/root      7025 2020-02-22 13:25 ./usr/lib/R/library/utils/R/utils.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/utils/Sweave/
-rw-r--r-- root/root      1305 2020-02-22 13:25 ./usr/lib/R/library/utils/Sweave/Sweave-test-1.Rnw
-rw-r--r-- root/root       725 2020-02-22 13:25 ./usr/lib/R/library/utils/Sweave/example-1.Rnw
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/utils/doc/
-rw-r--r-- root/root    321703 2020-02-22 13:25 ./usr/lib/R/library/utils/doc/Sweave.pdf
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/utils/help/
-rw-r--r-- root/root      8215 2020-02-22 13:25 ./usr/lib/R/library/utils/help/AnIndex
-rw-r--r-- root/root      3090 2020-02-22 13:25 ./usr/lib/R/library/utils/help/aliases.rds
-rw-r--r-- root/root      1464 2020-02-22 13:25 ./usr/lib/R/library/utils/help/paths.rds
-rw-r--r-- root/root    755110 2020-02-22 13:25 ./usr/lib/R/library/utils/help/utils.rdb
-rw-r--r-- root/root      3532 2020-02-22 13:25 ./usr/lib/R/library/utils/help/utils.rdx
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/utils/html/
-rw-r--r-- root/root     13586 2020-02-22 13:25 ./usr/lib/R/library/utils/iconvlist
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/utils/libs/
-rw-r--r-- root/root     42800 2020-02-22 13:25 ./usr/lib/R/library/utils/libs/utils.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/library/utils/misc/
-rw-r--r-- root/root        38 2020-02-22 13:25 ./usr/lib/R/library/utils/misc/exDIF.csv
-rw-r--r-- root/root       242 2020-02-22 13:25 ./usr/lib/R/library/utils/misc/exDIF.dif
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/modules/
-rw-r--r-- root/root    119292 2020-02-22 13:25 ./usr/lib/R/modules/R_X11.so
-rw-r--r-- root/root     47164 2020-02-22 13:25 ./usr/lib/R/modules/R_de.so
-rw-r--r-- root/root     75720 2020-02-22 13:25 ./usr/lib/R/modules/internet.so
-rw-r--r-- root/root     46680 2020-02-22 13:25 ./usr/lib/R/modules/lapack.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/R/site-library/
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/lib/libR.so -> R/lib/libR.so
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/pkgconfig/
-rw-r--r-- root/root       249 2020-02-22 13:25 ./usr/lib/pkgconfig/libR.pc
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/doc/
-rw-r--r-- root/root       979 2020-02-22 13:25 ./usr/share/R/doc/AUTHORS
-rw-r--r-- root/root      3283 2020-02-22 13:25 ./usr/share/R/doc/BioC_mirrors.csv
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/share/R/doc/COPYING -> ../../common-licenses/GPL-2
-rw-r--r-- root/root     23202 2020-02-22 13:25 ./usr/share/R/doc/COPYRIGHTS
-rw-r--r-- root/root     25774 2020-02-22 13:25 ./usr/share/R/doc/CRAN_mirrors.csv
-rw-r--r-- root/root    120169 2020-02-22 13:25 ./usr/share/R/doc/FAQ
-rw-r--r-- root/root      2530 2020-02-22 13:25 ./usr/share/R/doc/KEYWORDS
-rw-r--r-- root/root      3047 2020-02-22 13:25 ./usr/share/R/doc/KEYWORDS.db
-rw-r--r-- root/root    320577 2020-02-22 13:25 ./usr/share/R/doc/NEWS
-rw-r--r-- root/root     93568 2020-02-22 13:25 ./usr/share/R/doc/NEWS.0
-rw-r--r-- root/root    294277 2020-02-22 13:25 ./usr/share/R/doc/NEWS.1
-rw-r--r-- root/root    641822 2020-02-22 13:25 ./usr/share/R/doc/NEWS.2
-rw-r--r-- root/root    592697 2020-02-22 13:25 ./usr/share/R/doc/NEWS.pdf
-rw-r--r-- root/root    529610 2020-02-22 13:25 ./usr/share/R/doc/NEWS.rds
-rw-r--r-- root/root      1253 2020-02-22 13:25 ./usr/share/R/doc/RESOURCES
-rw-r--r-- root/root      3548 2020-02-22 13:25 ./usr/share/R/doc/THANKS
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/doc/html/
-rw-r--r-- root/root    356339 2020-02-22 13:25 ./usr/share/R/doc/html/NEWS.2.html
-rw-r--r-- root/root    458149 2020-02-22 13:25 ./usr/share/R/doc/html/NEWS.html
-rw-r--r-- root/root      1335 2020-02-22 13:25 ./usr/share/R/doc/html/R.css
-rw-r--r-- root/root      6755 2020-02-22 13:25 ./usr/share/R/doc/html/Rlogo.pdf
-rw-r--r-- root/root      2693 2020-02-22 13:25 ./usr/share/R/doc/html/Rlogo.svg
-rw-r--r-- root/root       610 2020-02-22 13:25 ./usr/share/R/doc/html/Search.html
-rw-r--r-- root/root      7799 2020-02-22 13:25 ./usr/share/R/doc/html/SearchOn.html
-rw-r--r-- root/root      1972 2020-02-22 13:25 ./usr/share/R/doc/html/about.html
-rw-r--r-- root/root      5430 2020-02-22 13:25 ./usr/share/R/doc/html/favicon.ico
-rw-r--r-- root/root      2152 2020-02-22 13:25 ./usr/share/R/doc/html/index.html
-rw-r--r-- root/root      1013 2020-02-22 13:25 ./usr/share/R/doc/html/left.jpg
-rw-r--r-- root/root     15985 2020-02-22 13:25 ./usr/share/R/doc/html/logo.jpg
-rw-r--r-- root/root       425 2020-02-22 13:25 ./usr/share/R/doc/html/packages-head-utf8.html
-rw-r--r-- root/root      2946 2020-02-22 13:25 ./usr/share/R/doc/html/packages.html
-rw-r--r-- root/root      5111 2020-02-22 13:25 ./usr/share/R/doc/html/resources.html
-rw-r--r-- root/root      1022 2020-02-22 13:25 ./usr/share/R/doc/html/right.jpg
-rw-r--r-- root/root      1021 2020-02-22 13:25 ./usr/share/R/doc/html/up.jpg
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/doc/manual/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/doc/manual/images/
-rw-r--r-- root/root      7185 2020-02-22 13:25 ./usr/share/R/doc/manual/images/QQ.png
-rw-r--r-- root/root      5570 2020-02-22 13:25 ./usr/share/R/doc/manual/images/ecdf.png
-rw-r--r-- root/root      3884 2020-02-22 13:25 ./usr/share/R/doc/manual/images/fig11.png
-rw-r--r-- root/root      3853 2020-02-22 13:25 ./usr/share/R/doc/manual/images/fig12.png
-rw-r--r-- root/root      9376 2020-02-22 13:25 ./usr/share/R/doc/manual/images/hist.png
-rw-r--r-- root/root      2728 2020-02-22 13:25 ./usr/share/R/doc/manual/images/ice.png
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/include/
-rw-r--r-- root/root      3413 2020-02-22 13:25 ./usr/share/R/include/R.h
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/include/R_ext/
-rw-r--r-- root/root      6084 2020-02-22 13:25 ./usr/share/R/include/R_ext/Altrep.h
-rw-r--r-- root/root      5858 2020-02-22 13:25 ./usr/share/R/include/R_ext/Applic.h
-rw-r--r-- root/root      2938 2020-02-22 13:25 ./usr/share/R/include/R_ext/Arith.h
-rw-r--r-- root/root     18461 2020-02-22 13:25 ./usr/share/R/include/R_ext/BLAS.h
-rw-r--r-- root/root      1307 2020-02-22 13:25 ./usr/share/R/include/R_ext/Boolean.h
-rw-r--r-- root/root      4208 2020-02-22 13:25 ./usr/share/R/include/R_ext/Callbacks.h
-rw-r--r-- root/root      1262 2020-02-22 13:25 ./usr/share/R/include/R_ext/Complex.h
-rw-r--r-- root/root      3408 2020-02-22 13:25 ./usr/share/R/include/R_ext/Connections.h
-rw-r--r-- root/root      1752 2020-02-22 13:25 ./usr/share/R/include/R_ext/Constants.h
-rw-r--r-- root/root      1591 2020-02-22 13:25 ./usr/share/R/include/R_ext/Error.h
-rw-r--r-- root/root      1082 2020-02-22 13:25 ./usr/share/R/include/R_ext/GetX11Image.h
-rw-r--r-- root/root     30315 2020-02-22 13:25 ./usr/share/R/include/R_ext/GraphicsDevice.h
-rw-r--r-- root/root     19329 2020-02-22 13:25 ./usr/share/R/include/R_ext/GraphicsEngine.h
-rw-r--r-- root/root      6795 2020-02-22 13:25 ./usr/share/R/include/R_ext/Itermacros.h
-rw-r--r-- root/root    127582 2020-02-22 13:25 ./usr/share/R/include/R_ext/Lapack.h
-rw-r--r-- root/root      4603 2020-02-22 13:25 ./usr/share/R/include/R_ext/Linpack.h
-rw-r--r-- root/root      1577 2020-02-22 13:25 ./usr/share/R/include/R_ext/MathThreads.h
-rw-r--r-- root/root      1822 2020-02-22 13:25 ./usr/share/R/include/R_ext/Memory.h
-rw-r--r-- root/root      1281 2020-02-22 13:25 ./usr/share/R/include/R_ext/Parse.h
-rw-r--r-- root/root      1706 2020-02-22 13:25 ./usr/share/R/include/R_ext/Print.h
-rw-r--r-- root/root      2820 2020-02-22 13:25 ./usr/share/R/include/R_ext/PrtUtil.h
-rw-r--r-- root/root     10981 2020-02-22 13:25 ./usr/share/R/include/R_ext/QuartzDevice.h
-rw-r--r-- root/root      2508 2020-02-22 13:25 ./usr/share/R/include/R_ext/R-ftp-http.h
-rw-r--r-- root/root      3553 2020-02-22 13:25 ./usr/share/R/include/R_ext/RS.h
-rw-r--r-- root/root      2956 2020-02-22 13:25 ./usr/share/R/include/R_ext/RStartup.h
-rw-r--r-- root/root      2010 2020-02-22 13:25 ./usr/share/R/include/R_ext/Rallocators.h
-rw-r--r-- root/root      2115 2020-02-22 13:25 ./usr/share/R/include/R_ext/Random.h
-rw-r--r-- root/root      3522 2020-02-22 13:25 ./usr/share/R/include/R_ext/Rdynload.h
-rw-r--r-- root/root      1548 2020-02-22 13:25 ./usr/share/R/include/R_ext/Riconv.h
-rw-r--r-- root/root      4103 2020-02-22 13:25 ./usr/share/R/include/R_ext/Utils.h
-rw-r--r-- root/root      1470 2020-02-22 13:25 ./usr/share/R/include/R_ext/Visibility.h
-rw-r--r-- root/root      3353 2020-02-22 13:25 ./usr/share/R/include/R_ext/eventloop.h
-rw-r--r-- root/root      1769 2020-02-22 13:25 ./usr/share/R/include/R_ext/libextern.h
-rw-r--r-- root/root      2819 2020-02-22 13:25 ./usr/share/R/include/R_ext/stats_package.h
-rw-r--r-- root/root      3108 2020-02-22 13:25 ./usr/share/R/include/R_ext/stats_stubs.h
-rw-r--r-- root/root       808 2020-02-22 13:25 ./usr/share/R/include/Rconfig.h
-rw-r--r-- root/root      6758 2020-02-22 13:25 ./usr/share/R/include/Rdefines.h
-rw-r--r-- root/root      2075 2020-02-22 13:25 ./usr/share/R/include/Rembedded.h
-rw-r--r-- root/root      5456 2020-02-22 13:25 ./usr/share/R/include/Rinterface.h
-rw-r--r-- root/root     57342 2020-02-22 13:25 ./usr/share/R/include/Rinternals.h
-rw-r--r-- root/root     17446 2020-02-22 13:25 ./usr/share/R/include/Rmath.h
-rw-r--r-- root/root       509 2020-02-22 13:25 ./usr/share/R/include/Rversion.h
-rw-r--r-- root/root      2593 2020-02-22 13:25 ./usr/share/R/include/S.h
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/R/
-rw-r--r-- root/root      3033 2020-02-22 13:25 ./usr/share/R/share/R/REMOVE.R
-rw-r--r-- root/root       283 2020-02-22 13:25 ./usr/share/R/share/R/examples-footer.R
-rw-r--r-- root/root      3915 2020-02-22 13:25 ./usr/share/R/share/R/examples-header.R
-rw-r--r-- root/root      1056 2020-02-22 13:25 ./usr/share/R/share/R/nspackloader.R
-rw-r--r-- root/root       131 2020-02-22 13:25 ./usr/share/R/share/R/tests-startup.R
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/Rd/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/Rd/macros/
-rw-r--r-- root/root      2364 2020-02-22 13:25 ./usr/share/R/share/Rd/macros/system.Rd
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/dictionaries/
-rw-r--r-- root/root      2614 2020-02-22 13:25 ./usr/share/R/share/dictionaries/en_stats.rds
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/encodings/
-rw-r--r-- root/root     74056 2020-02-22 13:25 ./usr/share/R/share/encodings/Adobe-glyphlist
-rw-r--r-- root/root     53369 2020-02-22 13:25 ./usr/share/R/share/encodings/character-sets
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/java/
-rw-r--r-- root/root        87 2020-02-22 13:25 ./usr/share/R/share/java/README
-rw-r--r-- root/root      1356 2020-02-22 13:25 ./usr/share/R/share/java/getsp.class
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/licenses/
-rw-r--r-- root/root     34523 2020-02-22 13:25 ./usr/share/R/share/licenses/AGPL-3
-rw-r--r-- root/root      9073 2020-02-22 13:25 ./usr/share/R/share/licenses/Artistic-2.0
-rw-r--r-- root/root      1630 2020-02-22 13:25 ./usr/share/R/share/licenses/BSD_2_clause
-rw-r--r-- root/root      1844 2020-02-22 13:25 ./usr/share/R/share/licenses/BSD_3_clause
-rw-r--r-- root/root     18092 2020-02-22 13:25 ./usr/share/R/share/licenses/GPL-2
-rw-r--r-- root/root     35149 2020-02-22 13:25 ./usr/share/R/share/licenses/GPL-3
-rw-r--r-- root/root     25292 2020-02-22 13:25 ./usr/share/R/share/licenses/LGPL-2
-rw-r--r-- root/root     26530 2020-02-22 13:25 ./usr/share/R/share/licenses/LGPL-2.1
-rw-r--r-- root/root      7652 2020-02-22 13:25 ./usr/share/R/share/licenses/LGPL-3
-rw-r--r-- root/root      1380 2020-02-22 13:25 ./usr/share/R/share/licenses/MIT
-rw-r--r-- root/root      9962 2020-02-22 13:25 ./usr/share/R/share/licenses/license.db
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/make/
-rw-r--r-- root/root      6647 2020-02-22 13:25 ./usr/share/R/share/make/basepkg.mk
-rw-r--r-- root/root       482 2020-02-22 13:25 ./usr/share/R/share/make/check_vars_ini.mk
-rw-r--r-- root/root       812 2020-02-22 13:25 ./usr/share/R/share/make/check_vars_out.mk
-rw-r--r-- root/root        86 2020-02-22 13:25 ./usr/share/R/share/make/clean.mk
-rw-r--r-- root/root        92 2020-02-22 13:25 ./usr/share/R/share/make/config.mk
-rw-r--r-- root/root       785 2020-02-22 13:25 ./usr/share/R/share/make/lazycomp.mk
-rw-r--r-- root/root       471 2020-02-22 13:25 ./usr/share/R/share/make/shlib.mk
-rw-r--r-- root/root       918 2020-02-22 13:25 ./usr/share/R/share/make/vars.mk
-rw-r--r-- root/root      1142 2020-02-22 13:25 ./usr/share/R/share/make/winshlib.mk
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/sh/
-rwxr-xr-x root/root        27 2020-02-22 13:25 ./usr/share/R/share/sh/echo.sh
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/texmf/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/texmf/bibtex/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/texmf/bibtex/bib/
-rw-r--r-- root/root    188744 2020-02-22 13:25 ./usr/share/R/share/texmf/bibtex/bib/RJournal.bib
-rw-r--r-- root/root     72374 2020-02-22 13:25 ./usr/share/R/share/texmf/bibtex/bib/Rnews.bib
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/texmf/bibtex/bst/
-rw-r--r-- root/root     32989 2020-02-22 13:25 ./usr/share/R/share/texmf/bibtex/bst/jss.bst
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/texmf/tex/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/R/share/texmf/tex/latex/
-rw-r--r-- root/root     15153 2020-02-22 13:25 ./usr/share/R/share/texmf/tex/latex/Rd.sty
-rw-r--r-- root/root      1635 2020-02-22 13:25 ./usr/share/R/share/texmf/tex/latex/Sweave.sty
-rw-r--r-- root/root     14804 2020-02-22 13:25 ./usr/share/R/share/texmf/tex/latex/jss.cls
-rw-r--r-- root/root       644 2020-02-22 13:25 ./usr/share/R/share/texmf/tex/latex/omsaer.fd
-rw-r--r-- root/root       607 2020-02-22 13:25 ./usr/share/R/share/texmf/tex/latex/omsaett.fd
-rw-r--r-- root/root       607 2020-02-22 13:25 ./usr/share/R/share/texmf/tex/latex/omscmtt.fd
-rw-r--r-- root/root       534 2020-02-22 13:25 ./usr/share/R/share/texmf/tex/latex/ts1aer.fd
-rw-r--r-- root/root       299 2020-02-22 13:25 ./usr/share/R/share/texmf/tex/latex/ts1aett.fd
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/applications/
-rw-r--r-- root/root       213 2020-02-22 13:25 ./usr/share/applications/R.desktop
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/bash-completion/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/bash-completion/completions/
-rw-r--r-- root/root     13596 2019-03-05 11:56 ./usr/share/bash-completion/completions/R
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/doc/r-base-core/
-rw-r--r-- root/root     35933 2018-09-25 08:43 ./usr/share/doc/r-base-core/NEWS.0.gz
-rw-r--r-- root/root    108753 2018-09-25 08:43 ./usr/share/doc/r-base-core/NEWS.1.gz
-rw-r--r-- root/root     96630 2018-09-25 08:43 ./usr/share/doc/r-base-core/NEWS.2.Rd.gz
-rw-r--r-- root/root    229657 2018-09-25 08:43 ./usr/share/doc/r-base-core/NEWS.2.gz
-rw-r--r-- root/root    122167 2020-02-18 23:04 ./usr/share/doc/r-base-core/NEWS.Rd.gz
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/share/doc/r-base-core/NEWS.gz -> changelog.gz
-rw-r--r-- root/root    583739 2020-02-22 13:25 ./usr/share/doc/r-base-core/NEWS.pdf.gz
-rw-r--r-- root/root    516321 2020-02-22 13:25 ./usr/share/doc/r-base-core/NEWS.rds.gz
-rw-r--r-- root/root      2739 2019-03-05 11:56 ./usr/share/doc/r-base-core/README.Atlas.gz
-rw-r--r-- root/root      2107 2018-09-25 08:47 ./usr/share/doc/r-base-core/README.gz
-rw-r--r-- root/root      3026 2019-03-05 11:56 ./usr/share/doc/r-base-core/README.mathlib
-rw-r--r-- root/root     33103 2020-02-22 13:25 ./usr/share/doc/r-base-core/changelog.Debian.gz
-rw-r--r-- root/root    112234 2020-02-22 13:25 ./usr/share/doc/r-base-core/changelog.gz
-rw-r--r-- root/root     20761 2019-03-05 11:56 ./usr/share/doc/r-base-core/copyright
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/share/doc/r-base-core/doc -> ../../R/doc
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/share/doc/r-base-core/library -> ../../../lib/R/library
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/icons/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/icons/hicolor/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/icons/hicolor/48x48/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/icons/hicolor/48x48/apps/
-rw-r--r-- root/root      4440 2020-02-22 13:25 ./usr/share/icons/hicolor/48x48/apps/rlogo_icon.png
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/info/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/lintian/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/lintian/overrides/
-rw-r--r-- root/root      7851 2019-03-05 11:56 ./usr/share/lintian/overrides/r-base-core
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/man/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/man/man1/
-rw-r--r-- root/root      2585 2020-02-22 13:25 ./usr/share/man/man1/R.1.gz
-rw-r--r-- root/root       659 2020-02-22 13:25 ./usr/share/man/man1/Rscript.1.gz
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/texmf/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/texmf/tex/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/texmf/tex/latex/
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/share/texmf/tex/latex/R -> ../../../R/share/texmf


r-mathlib_3.6.2.20200221-1_armhf.deb
------------------------------------

 new Debian package, version 2.0.
 size 1958104 bytes: control archive=2064 bytes.
    1787 bytes,    39 lines      control              
    1219 bytes,    18 lines      md5sums              
     369 bytes,    27 lines   *  postinst             #!/bin/sh
      21 bytes,     1 lines      shlibs               
      65 bytes,     2 lines      triggers             
 Package: r-mathlib
 Source: r-base
 Version: 3.6.2.20200221-1
 Architecture: armhf
 Maintainer: Dirk Eddelbuettel <edd@debian.org>
 Installed-Size: 2283
 Depends: libc6 (>= 2.29)
 Recommends: r-base-core (= 3.6.2.20200221-1), r-base-dev (= 3.6.2.20200221-1)
 Section: gnu-r
 Priority: optional
 Homepage: http://www.r-project.org/
 Description: GNU R standalone mathematics library
  R is a system for statistical computation and graphics.  It consists
  of a language plus a run-time environment with graphics, a debugger,
  access to certain system functions, and the ability to run programs
  stored in script files.
  .
  The design of R has been heavily influenced by two existing languages:
  Becker, Chambers & Wilks' S and Sussman's Scheme.  Whereas the
  resulting language is very similar in appearance to S, the underlying
  implementation and semantics are derived from Scheme.
  .
  The core of R is an interpreted computer language which allows
  branching and looping as well as modular programming using functions.
  Most of the user-visible functions in R are written in R.  It is
  possible for the user to interface to procedures written in the
  C, C++, or FORTRAN languages for efficiency, and many of R's core
  functions do so.  The R distribution contains functionality for a
  large number of statistical procedures and underlying applied math
  computations.  There is also a large set of functions which provide
  a flexible graphical environment for creating various kinds of data
  presentations.
  .
  Additionally, several thousand extension "packages" are available from
  CRAN, the Comprehensive R Archive Network, many also as Debian packages,
  named 'r-cran-<name>'.
  .
  This package provides the libRmath shared and static libraries which can
  be called from standalone C or C++ code.

drwxr-xr-x root/root         0 2020-02-22 13:25 ./
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/include/
-rw-r--r-- root/root     17446 2020-02-22 13:25 ./usr/include/Rmath.h
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/
-rw-r--r-- root/root    273730 2020-02-22 13:25 ./usr/lib/libRmath.a
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/lib/libRmath.so -> libRmath.so.1
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/lib/libRmath.so.1 -> libRmath.so.1.0.0
-rw-r--r-- root/root    149280 2020-02-22 13:25 ./usr/lib/libRmath.so.1.0.0
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/lib/pkgconfig/
-rw-r--r-- root/root       173 2020-02-22 13:25 ./usr/lib/pkgconfig/libRmath.pc
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/doc/r-mathlib/
-rw-r--r-- root/root     35933 2018-09-25 08:43 ./usr/share/doc/r-mathlib/NEWS.0.gz
-rw-r--r-- root/root    108753 2018-09-25 08:43 ./usr/share/doc/r-mathlib/NEWS.1.gz
-rw-r--r-- root/root     96630 2018-09-25 08:43 ./usr/share/doc/r-mathlib/NEWS.2.Rd.gz
-rw-r--r-- root/root    229657 2018-09-25 08:43 ./usr/share/doc/r-mathlib/NEWS.2.gz
-rw-r--r-- root/root    122167 2020-02-18 23:04 ./usr/share/doc/r-mathlib/NEWS.Rd.gz
lrwxrwxrwx root/root         0 2020-02-22 13:25 ./usr/share/doc/r-mathlib/NEWS.gz -> changelog.gz
-rw-r--r-- root/root    583739 2020-02-22 13:25 ./usr/share/doc/r-mathlib/NEWS.pdf.gz
-rw-r--r-- root/root    516321 2020-02-22 13:25 ./usr/share/doc/r-mathlib/NEWS.rds.gz
-rw-r--r-- root/root      2107 2018-09-25 08:47 ./usr/share/doc/r-mathlib/README.gz
-rw-r--r-- root/root      3026 2019-03-05 11:56 ./usr/share/doc/r-mathlib/README.mathlib
-rw-r--r-- root/root     33103 2020-02-22 13:25 ./usr/share/doc/r-mathlib/changelog.Debian.gz
-rw-r--r-- root/root    112234 2020-02-22 13:25 ./usr/share/doc/r-mathlib/changelog.gz
-rw-r--r-- root/root     20761 2019-03-05 11:56 ./usr/share/doc/r-mathlib/copyright
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/doc/r-mathlib/examples/
-rw-r--r-- root/root      1371 2018-09-25 08:46 ./usr/share/doc/r-mathlib/examples/test.c
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/lintian/
drwxr-xr-x root/root         0 2020-02-22 13:25 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       364 2019-03-05 11:56 ./usr/share/lintian/overrides/r-mathlib


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 321656
Build-Time: 9743
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 4130
Job: r-base_3.6.2.20200221-1
Machine Architecture: armhf
Package: r-base
Package-Time: 13994
Source-Version: 3.6.2.20200221-1
Space: 321656
Status: successful
Version: 3.6.2.20200221-1
--------------------------------------------------------------------------------
Finished at 2020-02-28T21:00:06Z
Build needed 03:53:14, 321656k disc space
Raspbian Package Auto-Building

Build log for r-base (3.6.2.20200221-1) on armhf
