Raspbian Package Auto-Building

r-base → 3.0.2-1 → armhf → 2013-10-08 01:11:16

sbuild (Debian sbuild) 0.63.2 (18 Aug 2012) on testbuildd.raspbian.org

╔══════════════════════════════════════════════════════════════════════════════╗
║ r-base 3.0.2-1 (armhf)                                     07 Oct 2013 23:16 ║
╚══════════════════════════════════════════════════════════════════════════════╝

Package: r-base
Version: 3.0.2-1
Source Version: 3.0.2-1
Distribution: jessie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'build/r-base-hyrWga/r-base-3.0.2' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/r-base-hyrWga' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/jessie-staging-armhf-sbuild-ead5c6ea-a76e-4a65-84bb-9ccf04e3f9f1' with '«CHROOT»'

┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot                                                                │
└──────────────────────────────────────────────────────────────────────────────┘

Get:1 http://172.17.0.1 jessie-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1 jessie-staging/main Sources [6931 kB]
Get:3 http://172.17.0.1 jessie-staging/main armhf Packages [8048 kB]
Ign http://172.17.0.1 jessie-staging/main Translation-en
Fetched 15.0 MB in 1min 2s (239 kB/s)
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files                                                           │
└──────────────────────────────────────────────────────────────────────────────┘


Check APT
─────────

Checking available source versions...

Download source files with APT
──────────────────────────────

Reading package lists...
Building dependency tree...
Reading state information...
Need to get 25.4 MB of source archives.
Get:1 http://172.17.0.1/private/ jessie-staging/main r-base 3.0.2-1 (dsc) [2078 B]
Get:2 http://172.17.0.1/private/ jessie-staging/main r-base 3.0.2-1 (tar) [25.4 MB]
Get:3 http://172.17.0.1/private/ jessie-staging/main r-base 3.0.2-1 (diff) [82.6 kB]
Fetched 25.4 MB in 2min 31s (168 kB/s)
Download complete and in download only mode

Check arch
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-vea1xw/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver)                         │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 18 not upgraded.
Need to get 0 B/706 B of archives.
After this operation, 0 B of additional disk space will be used.
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12118 files and directories currently installed.)
Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), gcc (>= 4:4.1.0), g++ (>= 4:4.1.0), gfortran (>= 4:4.1.0), libblas-dev, liblapack-dev (>= 3.1.1), tcl8.5-dev, tk8.5-dev, bison, groff-base, libncurses5-dev, libreadline-dev, debhelper (>= 7.2.3), texi2html, texinfo (>= 4.1-2), libbz2-dev, liblzma-dev, libpcre3-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff5-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-generic-recommended, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk, mpack
Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), gcc (>= 4:4.1.0), g++ (>= 4:4.1.0), gfortran (>= 4:4.1.0), libblas-dev, liblapack-dev (>= 3.1.1), tcl8.5-dev, tk8.5-dev, bison, groff-base, libncurses5-dev, libreadline-dev, debhelper (>= 7.2.3), texi2html, texinfo (>= 4.1-2), libbz2-dev, liblzma-dev, libpcre3-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff5-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-generic-recommended, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk, mpack
dpkg-deb: building package `sbuild-build-depends-r-base-dummy' in `/«BUILDDIR»/resolver-CsrBQp/apt_archive/sbuild-build-depends-r-base-dummy.deb'.
OK
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Install r-base build dependencies (apt-based resolver)                       │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
  bison bsdmainutils ca-certificates ca-certificates-java cpp-4.8 debhelper
  default-jdk default-jre default-jre-headless file fontconfig
  fontconfig-config fonts-cabin fonts-comfortaa fonts-dejavu-core
  fonts-dejavu-extra fonts-droid fonts-font-awesome fonts-freefont-otf
  fonts-freefont-ttf fonts-gfs-artemisia fonts-gfs-complutum fonts-gfs-didot
  fonts-gfs-neohellenic fonts-gfs-olga fonts-gfs-solomos fonts-inconsolata
  fonts-junicode fonts-lato fonts-linuxlibertine fonts-oflb-asana-math
  fonts-sil-gentium fonts-sil-gentium-basic fonts-stix g++-4.8 gcc-4.8
  gcc-4.8-base gettext gettext-base gfortran gfortran-4.8 gir1.2-freedesktop
  gir1.2-glib-2.0 gir1.2-pango-1.0 groff-base intltool-debian java-common
  libasan0 libasound2 libasound2-data libasprintf0c2 libasyncns0
  libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0 libatk1.0-data
  libatomic1 libaudit-common libaudit1 libavahi-client3 libavahi-common-data
  libavahi-common3 libbison-dev libblas-dev libblas3 libbz2-dev
  libcairo-gobject2 libcairo-script-interpreter2 libcairo2 libcairo2-dev
  libcroco3 libcups2 libcupsfilters1 libcupsimage2 libdatrie1 libdrm-dev
  libdrm-nouveau2 libdrm-omap1 libdrm-radeon1 libdrm2 libegl1-mesa
  libegl1-mesa-dev libegl1-mesa-drivers libelfg0 libexpat1 libexpat1-dev
  libffi6 libflac8 libfontconfig1 libfontconfig1-dev libfontenc1 libfreetype6
  libfreetype6-dev libgbm1 libgcc-4.8-dev libgcc1 libgcrypt11
  libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran-4.8-dev libgfortran3
  libgif4 libgirepository-1.0-1 libgl1-mesa-dev libgl1-mesa-glx libglapi-mesa
  libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libgnutls26
  libgomp1 libgpg-error0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2
  libgtk2.0-0 libgtk2.0-common libharfbuzz-dev libharfbuzz-icu0 libharfbuzz0a
  libice-dev libice6 libicu48 libidn11 libijs-0.35 libintl-perl libjasper1
  libjbig-dev libjbig0 libjbig2dec0 libjpeg8 libjpeg8-dev libjson-c2
  libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0
  liblapack-dev liblapack3 liblcms1 liblcms2-2 libllvm3.2 liblzma-dev
  liblzo2-2 libmagic1 libncurses5-dev libnspr4 libnss3 libogg0 libopenjpeg2
  libopenvg1-mesa libp11-kit0 libpango-1.0-0 libpango1.0-dev
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpangoxft-1.0-0 libpaper-utils
  libpaper1 libpcre3-dev libpcrecpp0 libpcsclite1 libpipeline1 libpixman-1-0
  libpixman-1-dev libpng12-0 libpng12-dev libpoppler19 libpopt0 libptexenc1
  libpthread-stubs0-dev libpulse0 libpython-stdlib libpython2.7-minimal
  libpython2.7-stdlib libreadline-dev libreadline6-dev libsigsegv2 libsm-dev
  libsm6 libsndfile1 libsqlite3-0 libssl1.0.0 libstdc++-4.8-dev libstdc++6
  libtasn1-3 libtext-unidecode-perl libthai-data libthai0 libtiff4 libtiff5
  libtiff5-dev libtiffxx5 libtinfo-dev libunistring0 libvorbis0a libvorbisenc2
  libwayland-client0 libwayland-server0 libwrap0 libx11-6 libx11-data
  libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxaw7
  libxcb-dri2-0 libxcb-dri2-0-dev libxcb-glx0 libxcb-glx0-dev libxcb-render0
  libxcb-render0-dev libxcb-shape0 libxcb-shm0 libxcb-shm0-dev libxcb-xfixes0
  libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage-dev libxdamage1
  libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3
  libxfont1 libxft-dev libxft2 libxi6 libxinerama1 libxkbfile1
  libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl
  libxml-sax-perl libxml2 libxmu6 libxmuu1 libxpm4 libxrandr2 libxrender-dev
  libxrender1 libxss-dev libxss1 libxt-dev libxt6 libxtst6 libxxf86vm-dev
  libxxf86vm1 luatex m4 man-db mesa-common-dev mime-support mpack
  openjdk-7-jdk openjdk-7-jre openjdk-7-jre-headless openjdk-7-jre-lib openssl
  otf-freefont pkg-config po-debconf poppler-data preview-latex-style python
  python-minimal python2.7 python2.7-minimal shared-mime-info tcl8.5
  tcl8.5-dev tex-common texi2html texinfo texlive-base texlive-binaries
  texlive-extra-utils texlive-fonts-extra texlive-fonts-recommended
  texlive-generic-recommended texlive-latex-base texlive-latex-extra
  texlive-latex-recommended texlive-pictures tk8.5 tk8.5-dev ttf-dejavu-core
  ttf-freefont tzdata-java ucf x11-common x11-xkb-utils x11proto-core-dev
  x11proto-damage-dev x11proto-dri2-dev x11proto-fixes-dev x11proto-gl-dev
  x11proto-input-dev x11proto-kb-dev x11proto-render-dev
  x11proto-scrnsaver-dev x11proto-xext-dev x11proto-xf86vidmode-dev xauth
  xdg-utils xfonts-base xfonts-encodings xfonts-utils xkb-data
  xorg-sgml-doctools xserver-common xtrans-dev xvfb zlib1g-dev
Suggested packages:
  bison-doc wamerican wordlist whois vacation gcc-4.8-locales dh-make
  fontforge gcc-4.8-doc libstdc++6-4.8-dbg libmudflap0-4.8-dev libgcc1-dbg
  libgomp1-dbg libitm1-dbg libatomic1-dbg libasan0-dbg libtsan0-dbg
  libbacktrace1-dbg libquadmath-dbg libmudflap0-dbg gettext-doc gfortran-doc
  gfortran-4.8-doc libgfortran3-dbg groff equivs libasound2-plugins alsa-utils
  libcairo2-doc cups-common rng-tools libglib2.0-doc krb5-doc krb5-user
  librsvg2-common gvfs libice-doc libintl-xs-perl libjasper-runtime
  liblcms-utils liblcms2-utils liblzma-doc ncurses-doc ttf-baekmuk
  ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
  ttf-arphic-bkai00mp libpango1.0-doc imagemagick pcscd pulseaudio libsm-doc
  libstdc++-4.8-doc libxcb-doc libxext-doc libxt-doc less www-browser
  mail-transport-agent inews openjdk-7-demo openjdk-7-source visualvm
  icedtea-7-plugin libnss-mdns sun-java6-fonts fonts-ipafont-gothic
  fonts-ipafont-mincho ttf-wqy-microhei ttf-wqy-zenhei ttf-indic-fonts
  libmail-box-perl poppler-utils ghostscript fonts-arphic-ukai
  fonts-arphic-uming fonts-unfonts-core python-doc python-tk python2.7-doc
  binfmt-support tcl-tclreadline tcl8.5-doc latex2html texinfo-doc-nonfree
  xpdf-reader pdf-viewer gv postscript-viewer perl-tk dvidvi latexmk xindy
  purifyeps fragmaster chktex lacheck latexdiff dvipng cm-super
  libfile-which-perl dot2tex libtcltk-ruby tk8.5-doc gvfs-bin xfs xserver
Recommended packages:
  texlive-xetex curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
  libgl1-mesa-dri hicolor-icon-theme libgtk2.0-bin krb5-locales tcpd
  libx11-doc libxml-sax-expat-perl xml-core texlive-luatex libgnome2-0
  libgnomevfs2-0 libgconf2-4 ttf-dejavu-extra icedtea-7-jre-jamvm
  libmail-sendmail-perl lmodern ruby wish texlive-fonts-extra-doc tipa
  texlive-fonts-recommended-doc tex-gyre texlive-latex-base-doc
  texlive-latex-extra-doc prosper texlive-latex-recommended-doc latex-xcolor
  latex-beamer pgf texlive-pictures-doc xterm x-terminal-emulator
  libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
  x11-xserver-utils
The following NEW packages will be installed:
  bison bsdmainutils ca-certificates ca-certificates-java debhelper
  default-jdk default-jre default-jre-headless file fontconfig
  fontconfig-config fonts-cabin fonts-comfortaa fonts-dejavu-core
  fonts-dejavu-extra fonts-droid fonts-font-awesome fonts-freefont-otf
  fonts-freefont-ttf fonts-gfs-artemisia fonts-gfs-complutum fonts-gfs-didot
  fonts-gfs-neohellenic fonts-gfs-olga fonts-gfs-solomos fonts-inconsolata
  fonts-junicode fonts-lato fonts-linuxlibertine fonts-oflb-asana-math
  fonts-sil-gentium fonts-sil-gentium-basic fonts-stix gettext gettext-base
  gfortran gfortran-4.8 gir1.2-freedesktop gir1.2-glib-2.0 gir1.2-pango-1.0
  groff-base intltool-debian java-common libasound2 libasound2-data
  libasprintf0c2 libasyncns0 libatk-wrapper-java libatk-wrapper-java-jni
  libatk1.0-0 libatk1.0-data libaudit-common libaudit1 libavahi-client3
  libavahi-common-data libavahi-common3 libbison-dev libblas-dev libblas3
  libbz2-dev libcairo-gobject2 libcairo-script-interpreter2 libcairo2
  libcairo2-dev libcroco3 libcups2 libcupsfilters1 libcupsimage2 libdatrie1
  libdrm-dev libdrm-nouveau2 libdrm-omap1 libdrm-radeon1 libdrm2 libegl1-mesa
  libegl1-mesa-dev libegl1-mesa-drivers libelfg0 libexpat1 libexpat1-dev
  libffi6 libflac8 libfontconfig1 libfontconfig1-dev libfontenc1 libfreetype6
  libfreetype6-dev libgbm1 libgcrypt11 libgdk-pixbuf2.0-0
  libgdk-pixbuf2.0-common libgfortran-4.8-dev libgfortran3 libgif4
  libgirepository-1.0-1 libgl1-mesa-dev libgl1-mesa-glx libglapi-mesa
  libglib2.0-0 libglib2.0-bin libglib2.0-data libglib2.0-dev libgnutls26
  libgpg-error0 libgraphite2-3 libgs9 libgs9-common libgssapi-krb5-2
  libgtk2.0-0 libgtk2.0-common libharfbuzz-dev libharfbuzz-icu0 libharfbuzz0a
  libice-dev libice6 libicu48 libidn11 libijs-0.35 libintl-perl libjasper1
  libjbig-dev libjbig0 libjbig2dec0 libjpeg8 libjpeg8-dev libjson-c2
  libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0
  liblapack-dev liblapack3 liblcms1 liblcms2-2 libllvm3.2 liblzma-dev
  liblzo2-2 libmagic1 libncurses5-dev libnspr4 libnss3 libogg0 libopenjpeg2
  libopenvg1-mesa libp11-kit0 libpango-1.0-0 libpango1.0-dev
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpangoxft-1.0-0 libpaper-utils
  libpaper1 libpcre3-dev libpcrecpp0 libpcsclite1 libpipeline1 libpixman-1-0
  libpixman-1-dev libpng12-0 libpng12-dev libpoppler19 libpopt0 libptexenc1
  libpthread-stubs0-dev libpulse0 libpython-stdlib libpython2.7-minimal
  libpython2.7-stdlib libreadline-dev libreadline6-dev libsigsegv2 libsm-dev
  libsm6 libsndfile1 libsqlite3-0 libssl1.0.0 libtasn1-3
  libtext-unidecode-perl libthai-data libthai0 libtiff4 libtiff5 libtiff5-dev
  libtiffxx5 libtinfo-dev libunistring0 libvorbis0a libvorbisenc2
  libwayland-client0 libwayland-server0 libwrap0 libx11-6 libx11-data
  libx11-dev libx11-xcb-dev libx11-xcb1 libxau-dev libxau6 libxaw7
  libxcb-dri2-0 libxcb-dri2-0-dev libxcb-glx0 libxcb-glx0-dev libxcb-render0
  libxcb-render0-dev libxcb-shape0 libxcb-shm0 libxcb-shm0-dev libxcb-xfixes0
  libxcb1 libxcb1-dev libxcomposite1 libxcursor1 libxdamage-dev libxdamage1
  libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3
  libxfont1 libxft-dev libxft2 libxi6 libxinerama1 libxkbfile1
  libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl
  libxml-sax-perl libxml2 libxmu6 libxmuu1 libxpm4 libxrandr2 libxrender-dev
  libxrender1 libxss-dev libxss1 libxt-dev libxt6 libxtst6 libxxf86vm-dev
  libxxf86vm1 luatex m4 man-db mesa-common-dev mime-support mpack
  openjdk-7-jdk openjdk-7-jre openjdk-7-jre-headless openjdk-7-jre-lib openssl
  otf-freefont pkg-config po-debconf poppler-data preview-latex-style python
  python-minimal python2.7 python2.7-minimal sbuild-build-depends-r-base-dummy
  shared-mime-info tcl8.5 tcl8.5-dev tex-common texi2html texinfo texlive-base
  texlive-binaries texlive-extra-utils texlive-fonts-extra
  texlive-fonts-recommended texlive-generic-recommended texlive-latex-base
  texlive-latex-extra texlive-latex-recommended texlive-pictures tk8.5
  tk8.5-dev ttf-dejavu-core ttf-freefont tzdata-java ucf x11-common
  x11-xkb-utils x11proto-core-dev x11proto-damage-dev x11proto-dri2-dev
  x11proto-fixes-dev x11proto-gl-dev x11proto-input-dev x11proto-kb-dev
  x11proto-render-dev x11proto-scrnsaver-dev x11proto-xext-dev
  x11proto-xf86vidmode-dev xauth xdg-utils xfonts-base xfonts-encodings
  xfonts-utils xkb-data xorg-sgml-doctools xserver-common xtrans-dev xvfb
  zlib1g-dev
The following packages will be upgraded:
  cpp-4.8 g++-4.8 gcc-4.8 gcc-4.8-base libasan0 libatomic1 libgcc-4.8-dev
  libgcc1 libgomp1 libstdc++-4.8-dev libstdc++6
11 upgraded, 313 newly installed, 0 to remove and 7 not upgraded.
Need to get 423 MB/423 MB of archives.
After this operation, 1024 MB of additional disk space will be used.
Get:1 http://172.17.0.1/private/ jessie-staging/main libgomp1 armhf 4.8.1-10+rpi1 [28.0 kB]
Get:2 http://172.17.0.1/private/ jessie-staging/main gcc-4.8-base armhf 4.8.1-10+rpi1 [151 kB]
Get:3 http://172.17.0.1/private/ jessie-staging/main libstdc++6 armhf 4.8.1-10+rpi1 [300 kB]
Get:4 http://172.17.0.1/private/ jessie-staging/main libasan0 armhf 4.8.1-10+rpi1 [72.5 kB]
Get:5 http://172.17.0.1/private/ jessie-staging/main libatomic1 armhf 4.8.1-10+rpi1 [6894 B]
Get:6 http://172.17.0.1/private/ jessie-staging/main cpp-4.8 armhf 4.8.1-10+rpi1 [5440 kB]
Get:7 http://172.17.0.1/private/ jessie-staging/main libstdc++-4.8-dev armhf 4.8.1-10+rpi1 [1801 kB]
Get:8 http://172.17.0.1/private/ jessie-staging/main g++-4.8 armhf 4.8.1-10+rpi1 [5887 kB]
Get:9 http://172.17.0.1/private/ jessie-staging/main gcc-4.8 armhf 4.8.1-10+rpi1 [5919 kB]
Get:10 http://172.17.0.1/private/ jessie-staging/main libgcc-4.8-dev armhf 4.8.1-10+rpi1 [318 kB]
Get:11 http://172.17.0.1/private/ jessie-staging/main libgcc1 armhf 1:4.8.1-10+rpi1 [54.3 kB]
Get:12 http://172.17.0.1/private/ jessie-staging/main libpipeline1 armhf 1.2.4-1 [36.9 kB]
Get:13 http://172.17.0.1/private/ jessie-staging/main libpopt0 armhf 1.16-7 [56.5 kB]
Get:14 http://172.17.0.1/private/ jessie-staging/main libssl1.0.0 armhf 1.0.1e-3+rpi1 [1039 kB]
Get:15 http://172.17.0.1/private/ jessie-staging/main groff-base armhf 1.22.2-3 [666 kB]
Get:16 http://172.17.0.1/private/ jessie-staging/main bsdmainutils armhf 9.0.5 [206 kB]
Get:17 http://172.17.0.1/private/ jessie-staging/main man-db armhf 2.6.5-2 [949 kB]
Get:18 http://172.17.0.1/private/ jessie-staging/main libasprintf0c2 armhf 0.18.3.1-1 [29.4 kB]
Get:19 http://172.17.0.1/private/ jessie-staging/main libgpg-error0 armhf 1.12-0.2 [78.9 kB]
Get:20 http://172.17.0.1/private/ jessie-staging/main libgcrypt11 armhf 1.5.3-2 [296 kB]
Get:21 http://172.17.0.1/private/ jessie-staging/main libp11-kit0 armhf 0.18.5-3 [110 kB]
Get:22 http://172.17.0.1/private/ jessie-staging/main libtasn1-3 armhf 2.14-3 [64.1 kB]
Get:23 http://172.17.0.1/private/ jessie-staging/main libgnutls26 armhf 2.12.23-7 [596 kB]
Get:24 http://172.17.0.1/private/ jessie-staging/main libkeyutils1 armhf 1.5.6-1 [7900 B]
Get:25 http://172.17.0.1/private/ jessie-staging/main libkrb5support0 armhf 1.11.3+dfsg-3 [55.3 kB]
Get:26 http://172.17.0.1/private/ jessie-staging/main libk5crypto3 armhf 1.11.3+dfsg-3 [134 kB]
Get:27 http://172.17.0.1/private/ jessie-staging/main libkrb5-3 armhf 1.11.3+dfsg-3 [340 kB]
Get:28 http://172.17.0.1/private/ jessie-staging/main libgssapi-krb5-2 armhf 1.11.3+dfsg-3 [146 kB]
Get:29 http://172.17.0.1/private/ jessie-staging/main libidn11 armhf 1.28-1 [181 kB]
Get:30 http://172.17.0.1/private/ jessie-staging/main libmagic1 armhf 1:5.14-2 [213 kB]
Get:31 http://172.17.0.1/private/ jessie-staging/main libsqlite3-0 armhf 3.8.0.2-1 [397 kB]
Get:32 http://172.17.0.1/private/ jessie-staging/main libwrap0 armhf 7.6.q-24 [59.7 kB]
Get:33 http://172.17.0.1/private/ jessie-staging/main libxml2 armhf 2.9.1+dfsg1-3 [836 kB]
Get:34 http://172.17.0.1/private/ jessie-staging/main libpython2.7-minimal armhf 2.7.5-8+rpi2 [541 kB]
Get:35 http://172.17.0.1/private/ jessie-staging/main python2.7-minimal armhf 2.7.5-8+rpi2 [1494 kB]
Get:36 http://172.17.0.1/private/ jessie-staging/main fonts-droid all 1:4.3-1 [3039 kB]
Get:37 http://172.17.0.1/private/ jessie-staging/main fonts-junicode all 0.7.8-1 [1239 kB]
Get:38 http://172.17.0.1/private/ jessie-staging/main fonts-lato all 1.104-4 [244 kB]
Get:39 http://172.17.0.1/private/ jessie-staging/main libasound2-data all 1.0.27.2-1 [62.6 kB]
Get:40 http://172.17.0.1/private/ jessie-staging/main libasound2 armhf 1.0.27.2-1 [401 kB]
Get:41 http://172.17.0.1/private/ jessie-staging/main libasyncns0 armhf 0.8-4 [12.8 kB]
Get:42 http://172.17.0.1/private/ jessie-staging/main libffi6 armhf 3.0.13-4 [19.8 kB]
Get:43 http://172.17.0.1/private/ jessie-staging/main libglib2.0-0 armhf 2.36.4-1 [1907 kB]
Get:44 http://172.17.0.1/private/ jessie-staging/main libatk1.0-data all 2.10.0-2 [171 kB]
Get:45 http://172.17.0.1/private/ jessie-staging/main libatk1.0-0 armhf 2.10.0-2 [79.0 kB]
Get:46 http://172.17.0.1/private/ jessie-staging/main libdrm2 armhf 2.4.46-3 [466 kB]
Get:47 http://172.17.0.1/private/ jessie-staging/main libglapi-mesa armhf 9.1.6-2 [61.6 kB]
Get:48 http://172.17.0.1/private/ jessie-staging/main libllvm3.2 armhf 1:3.2repack-10+rpi1 [7645 kB]
Get:49 http://172.17.0.1/private/ jessie-staging/main libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:50 http://172.17.0.1/private/ jessie-staging/main libxdmcp6 armhf 1:1.1.1-1 [24.6 kB]
Get:51 http://172.17.0.1/private/ jessie-staging/main libxcb1 armhf 1.9.1-3 [43.3 kB]
Get:52 http://172.17.0.1/private/ jessie-staging/main libxcb-dri2-0 armhf 1.9.1-3 [12.1 kB]
Get:53 http://172.17.0.1/private/ jessie-staging/main libgbm1 armhf 9.1.6-2 [365 kB]
Get:54 http://172.17.0.1/private/ jessie-staging/main libwayland-client0 armhf 1.2.1-1 [19.7 kB]
Get:55 http://172.17.0.1/private/ jessie-staging/main libwayland-server0 armhf 1.2.1-1 [24.0 kB]
Get:56 http://172.17.0.1/private/ jessie-staging/main libx11-data all 2:1.6.1-1 [125 kB]
Get:57 http://172.17.0.1/private/ jessie-staging/main libx11-6 armhf 2:1.6.1-1 [861 kB]
Get:58 http://172.17.0.1/private/ jessie-staging/main libx11-xcb1 armhf 2:1.6.1-1 [157 kB]
Get:59 http://172.17.0.1/private/ jessie-staging/main libxcb-render0 armhf 1.9.1-3 [16.8 kB]
Get:60 http://172.17.0.1/private/ jessie-staging/main libxcb-shape0 armhf 1.9.1-3 [10.9 kB]
Get:61 http://172.17.0.1/private/ jessie-staging/main libxcb-xfixes0 armhf 1.9.1-3 [13.8 kB]
Get:62 http://172.17.0.1/private/ jessie-staging/main libegl1-mesa armhf 9.1.6-2 [74.5 kB]
Get:63 http://172.17.0.1/private/ jessie-staging/main libexpat1 armhf 2.1.0-4 [117 kB]
Get:64 http://172.17.0.1/private/ jessie-staging/main libfreetype6 armhf 2.4.9-1.1 [401 kB]
Get:65 http://172.17.0.1/private/ jessie-staging/main ucf all 3.0027+nmu1 [70.6 kB]
Get:66 http://172.17.0.1/private/ jessie-staging/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
Get:67 http://172.17.0.1/private/ jessie-staging/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
Get:68 http://172.17.0.1/private/ jessie-staging/main fonts-freefont-ttf all 20120503-1 [6024 kB]
Get:69 http://172.17.0.1/private/ jessie-staging/main ttf-freefont all 20120503-1 [118 kB]
Get:70 http://172.17.0.1/private/ jessie-staging/main fontconfig-config all 2.10.2-2 [251 kB]
Get:71 http://172.17.0.1/private/ jessie-staging/main libfontconfig1 armhf 2.10.2-2 [306 kB]
Get:72 http://172.17.0.1/private/ jessie-staging/main libxcb-glx0 armhf 1.9.1-3 [27.6 kB]
Get:73 http://172.17.0.1/private/ jessie-staging/main libxfixes3 armhf 1:5.0.1-1 [21.0 kB]
Get:74 http://172.17.0.1/private/ jessie-staging/main libxdamage1 armhf 1:1.1.4-1 [14.6 kB]
Get:75 http://172.17.0.1/private/ jessie-staging/main libxext6 armhf 2:1.3.2-1 [51.1 kB]
Get:76 http://172.17.0.1/private/ jessie-staging/main libxxf86vm1 armhf 1:1.1.3-1 [20.0 kB]
Get:77 http://172.17.0.1/private/ jessie-staging/main libgl1-mesa-glx armhf 9.1.6-2 [127 kB]
Get:78 http://172.17.0.1/private/ jessie-staging/main libpixman-1-0 armhf 0.30.2-1 [446 kB]
Get:79 http://172.17.0.1/private/ jessie-staging/main libpng12-0 armhf 1.2.49-4 [179 kB]
Get:80 http://172.17.0.1/private/ jessie-staging/main libxcb-shm0 armhf 1.9.1-3 [10.4 kB]
Get:81 http://172.17.0.1/private/ jessie-staging/main libxrender1 armhf 1:0.9.8-1 [30.4 kB]
Get:82 http://172.17.0.1/private/ jessie-staging/main libcairo2 armhf 1.12.16-2 [998 kB]
Get:83 http://172.17.0.1/private/ jessie-staging/main libjpeg8 armhf 8d-1 [132 kB]
Get:84 http://172.17.0.1/private/ jessie-staging/main libjasper1 armhf 1.900.1-14 [141 kB]
Get:85 http://172.17.0.1/private/ jessie-staging/main libjbig0 armhf 2.0-2 [31.5 kB]
Get:86 http://172.17.0.1/private/ jessie-staging/main libtiff4 armhf 3.9.7-2 [188 kB]
Get:87 http://172.17.0.1/private/ jessie-staging/main libgdk-pixbuf2.0-common all 2.28.2-1 [291 kB]
Get:88 http://172.17.0.1/private/ jessie-staging/main libgdk-pixbuf2.0-0 armhf 2.28.2-1 [141 kB]
Get:89 http://172.17.0.1/private/ jessie-staging/main libgtk2.0-common all 2.24.21-1 [3140 kB]
Get:90 http://172.17.0.1/private/ jessie-staging/main libavahi-common-data armhf 0.6.31-2 [137 kB]
Get:91 http://172.17.0.1/private/ jessie-staging/main libavahi-common3 armhf 0.6.31-2 [52.6 kB]
Get:92 http://172.17.0.1/private/ jessie-staging/main libavahi-client3 armhf 0.6.31-2 [55.4 kB]
Get:93 http://172.17.0.1/private/ jessie-staging/main libcups2 armhf 1.6.3-1+rpi1 [263 kB]
Get:94 http://172.17.0.1/private/ jessie-staging/main libthai-data all 0.1.19-2 [156 kB]
Get:95 http://172.17.0.1/private/ jessie-staging/main libdatrie1 armhf 0.2.6-2 [27.0 kB]
Get:96 http://172.17.0.1/private/ jessie-staging/main libthai0 armhf 0.1.19-2 [40.5 kB]
Get:97 http://172.17.0.1/private/ jessie-staging/main fontconfig armhf 2.10.2-2 [374 kB]
Get:98 http://172.17.0.1/private/ jessie-staging/main libpango-1.0-0 armhf 1.32.5-5 [251 kB]
Get:99 http://172.17.0.1/private/ jessie-staging/main libgraphite2-3 armhf 1.2.3-1 [55.0 kB]
Get:100 http://172.17.0.1/private/ jessie-staging/main libharfbuzz0a armhf 0.9.19-1 [432 kB]
Get:101 http://172.17.0.1/private/ jessie-staging/main libpangoft2-1.0-0 armhf 1.32.5-5 [186 kB]
Get:102 http://172.17.0.1/private/ jessie-staging/main libpangocairo-1.0-0 armhf 1.32.5-5 [176 kB]
Get:103 http://172.17.0.1/private/ jessie-staging/main libxcomposite1 armhf 1:0.4.4-1 [16.8 kB]
Get:104 http://172.17.0.1/private/ jessie-staging/main libxcursor1 armhf 1:1.1.14-1 [34.7 kB]
Get:105 http://172.17.0.1/private/ jessie-staging/main libxi6 armhf 2:1.7.2-1 [76.8 kB]
Get:106 http://172.17.0.1/private/ jessie-staging/main libxinerama1 armhf 2:1.1.3-1 [16.9 kB]
Get:107 http://172.17.0.1/private/ jessie-staging/main libxrandr2 armhf 2:1.4.1-1 [33.8 kB]
Get:108 http://172.17.0.1/private/ jessie-staging/main shared-mime-info armhf 1.0-1 [1065 kB]
Get:109 http://172.17.0.1/private/ jessie-staging/main libgtk2.0-0 armhf 2.24.21-1 [1962 kB]
Get:110 http://172.17.0.1/private/ jessie-staging/main openjdk-7-jre-lib all 7u25-2.3.12-1+rpi1 [5581 kB]
Get:111 http://172.17.0.1/private/ jessie-staging/main openssl armhf 1.0.1e-3+rpi1 [702 kB]
Get:112 http://172.17.0.1/private/ jessie-staging/main ca-certificates all 20130906 [185 kB]
Get:113 http://172.17.0.1/private/ jessie-staging/main libnspr4 armhf 2:4.10-1 [117 kB]
Get:114 http://172.17.0.1/private/ jessie-staging/main libnss3 armhf 2:3.15.1-1 [871 kB]
Get:115 http://172.17.0.1/private/ jessie-staging/main ca-certificates-java all 20130815 [14.7 kB]
Get:116 http://172.17.0.1/private/ jessie-staging/main tzdata-java all 2013d-1 [90.3 kB]
Get:117 http://172.17.0.1/private/ jessie-staging/main java-common all 0.49 [135 kB]
Get:118 http://172.17.0.1/private/ jessie-staging/main liblcms2-2 armhf 2.2+git20110628-2.2 [120 kB]
Get:119 http://172.17.0.1/private/ jessie-staging/main libpcsclite1 armhf 1.8.8-4 [54.8 kB]
Get:120 http://172.17.0.1/private/ jessie-staging/main openjdk-7-jre-headless armhf 7u25-2.3.12-1+rpi1 [33.2 MB]
Get:121 http://172.17.0.1/private/ jessie-staging/main default-jre-headless armhf 1:1.7-49 [8648 B]
Get:122 http://172.17.0.1/private/ jessie-staging/main libgif4 armhf 4.1.6-10 [40.6 kB]
Get:123 http://172.17.0.1/private/ jessie-staging/main x11-common all 1:7.7+4 [282 kB]
Get:124 http://172.17.0.1/private/ jessie-staging/main libice6 armhf 2:1.0.8-2 [56.2 kB]
Get:125 http://172.17.0.1/private/ jessie-staging/main libjson-c2 armhf 0.11-3 [25.4 kB]
Get:126 http://172.17.0.1/private/ jessie-staging/main libsm6 armhf 2:1.2.1-2 [32.5 kB]
Get:127 http://172.17.0.1/private/ jessie-staging/main libogg0 armhf 1.3.1-1 [18.2 kB]
Get:128 http://172.17.0.1/private/ jessie-staging/main libflac8 armhf 1.3.0-2 [95.0 kB]
Get:129 http://172.17.0.1/private/ jessie-staging/main libvorbis0a armhf 1.3.2-1.3 [102 kB]
Get:130 http://172.17.0.1/private/ jessie-staging/main libvorbisenc2 armhf 1.3.2-1.3 [120 kB]
Get:131 http://172.17.0.1/private/ jessie-staging/main libsndfile1 armhf 1.0.25-7 [249 kB]
Get:132 http://172.17.0.1/private/ jessie-staging/main libxtst6 armhf 2:1.2.2-1 [26.8 kB]
Get:133 http://172.17.0.1/private/ jessie-staging/main libpulse0 armhf 4.0-6 [205 kB]
Get:134 http://172.17.0.1/private/ jessie-staging/main openjdk-7-jre armhf 7u25-2.3.12-1+rpi1 [206 kB]
Get:135 http://172.17.0.1/private/ jessie-staging/main default-jre armhf 1:1.7-49 [848 B]
Get:136 http://172.17.0.1/private/ jessie-staging/main libatk-wrapper-java all 0.30.4-4 [30.1 kB]
Get:137 http://172.17.0.1/private/ jessie-staging/main libatk-wrapper-java-jni armhf 0.30.4-4 [26.1 kB]
Get:138 http://172.17.0.1/private/ jessie-staging/main libaudit-common all 1:2.3.2-2 [11.5 kB]
Get:139 http://172.17.0.1/private/ jessie-staging/main libaudit1 armhf 1:2.3.2-2 [49.3 kB]
Get:140 http://172.17.0.1/private/ jessie-staging/main libcairo-gobject2 armhf 1.12.16-2 [540 kB]
Get:141 http://172.17.0.1/private/ jessie-staging/main liblzo2-2 armhf 2.06-1.2 [55.9 kB]
Get:142 http://172.17.0.1/private/ jessie-staging/main libcairo-script-interpreter2 armhf 1.12.16-2 [575 kB]
Get:143 http://172.17.0.1/private/ jessie-staging/main libcroco3 armhf 0.6.8-2 [119 kB]
Get:144 http://172.17.0.1/private/ jessie-staging/main libcupsimage2 armhf 1.6.3-1+rpi1 [107 kB]
Get:145 http://172.17.0.1/private/ jessie-staging/main libcupsfilters1 armhf 1.0.34-3+b1 [82.2 kB]
Get:146 http://172.17.0.1/private/ jessie-staging/main libdrm-nouveau2 armhf 2.4.46-3 [460 kB]
Get:147 http://172.17.0.1/private/ jessie-staging/main libdrm-omap1 armhf 2.4.46-3 [451 kB]
Get:148 http://172.17.0.1/private/ jessie-staging/main libdrm-radeon1 armhf 2.4.46-3 [468 kB]
Get:149 http://172.17.0.1/private/ jessie-staging/main libopenvg1-mesa armhf 9.1.6-2 [41.4 kB]
Get:150 http://172.17.0.1/private/ jessie-staging/main libegl1-mesa-drivers armhf 9.1.6-2 [1727 kB]
Get:151 http://172.17.0.1/private/ jessie-staging/main libfontenc1 armhf 1:1.1.2-1 [23.9 kB]
Get:152 http://172.17.0.1/private/ jessie-staging/main libgfortran3 armhf 4.8.1-10+rpi1 [229 kB]
Get:153 http://172.17.0.1/private/ jessie-staging/main libicu48 armhf 4.8.1.1-13 [4501 kB]
Get:154 http://172.17.0.1/private/ jessie-staging/main libharfbuzz-icu0 armhf 0.9.19-1 [299 kB]
Get:155 http://172.17.0.1/private/ jessie-staging/main liblcms1 armhf 1.19.dfsg-1.2 [98.5 kB]
Get:156 http://172.17.0.1/private/ jessie-staging/main libxft2 armhf 2.3.1-1 [55.4 kB]
Get:157 http://172.17.0.1/private/ jessie-staging/main libpangoxft-1.0-0 armhf 1.32.5-5 [171 kB]
Get:158 http://172.17.0.1/private/ jessie-staging/main libpaper1 armhf 1.1.24+nmu2 [20.9 kB]
Get:159 http://172.17.0.1/private/ jessie-staging/main libpcrecpp0 armhf 1:8.31-2 [125 kB]
Get:160 http://172.17.0.1/private/ jessie-staging/main libopenjpeg2 armhf 1.3+dfsg-4.6 [75.9 kB]
Get:161 http://172.17.0.1/private/ jessie-staging/main libpoppler19 armhf 0.18.4-8 [990 kB]
Get:162 http://172.17.0.1/private/ jessie-staging/main libsigsegv2 armhf 2.10-2 [29.2 kB]
Get:163 http://172.17.0.1/private/ jessie-staging/main libtiff5 armhf 4.0.3-5 [227 kB]
Get:164 http://172.17.0.1/private/ jessie-staging/main libtiffxx5 armhf 4.0.3-5 [73.8 kB]
Get:165 http://172.17.0.1/private/ jessie-staging/main libunistring0 armhf 0.9.3-5 [408 kB]
Get:166 http://172.17.0.1/private/ jessie-staging/main libxt6 armhf 1:1.1.4-1 [183 kB]
Get:167 http://172.17.0.1/private/ jessie-staging/main libxmu6 armhf 2:1.1.1-1 [59.1 kB]
Get:168 http://172.17.0.1/private/ jessie-staging/main libxpm4 armhf 1:3.5.10-1 [44.9 kB]
Get:169 http://172.17.0.1/private/ jessie-staging/main libxaw7 armhf 2:1.0.11-1 [195 kB]
Get:170 http://172.17.0.1/private/ jessie-staging/main libxfont1 armhf 1:1.4.6-1 [147 kB]
Get:171 http://172.17.0.1/private/ jessie-staging/main libxkbfile1 armhf 1:1.0.8-1 [74.9 kB]
Get:172 http://172.17.0.1/private/ jessie-staging/main libxmuu1 armhf 2:1.1.1-1 [23.0 kB]
Get:173 http://172.17.0.1/private/ jessie-staging/main libxss1 armhf 1:1.2.2-1 [16.8 kB]
Get:174 http://172.17.0.1/private/ jessie-staging/main poppler-data all 0.4.6-4 [1481 kB]
Get:175 http://172.17.0.1/private/ jessie-staging/main libjbig-dev armhf 2.0-2 [11.3 kB]
Get:176 http://172.17.0.1/private/ jessie-staging/main file armhf 1:5.14-2 [53.8 kB]
Get:177 http://172.17.0.1/private/ jessie-staging/main gettext-base armhf 0.18.3.1-1 [136 kB]
Get:178 http://172.17.0.1/private/ jessie-staging/main mime-support all 3.54 [36.4 kB]
Get:179 http://172.17.0.1/private/ jessie-staging/main libpython2.7-stdlib armhf 2.7.5-8+rpi2 [2478 kB]
Get:180 http://172.17.0.1/private/ jessie-staging/main m4 armhf 1.4.16-5 [245 kB]
Get:181 http://172.17.0.1/private/ jessie-staging/main python2.7 armhf 2.7.5-8+rpi2 [234 kB]
Get:182 http://172.17.0.1/private/ jessie-staging/main python-minimal armhf 2.7.5-5 [43.1 kB]
Get:183 http://172.17.0.1/private/ jessie-staging/main libpython-stdlib armhf 2.7.5-5 [19.8 kB]
Get:184 http://172.17.0.1/private/ jessie-staging/main python armhf 2.7.5-5 [180 kB]
Get:185 http://172.17.0.1/private/ jessie-staging/main libtext-unidecode-perl all 0.04-2 [115 kB]
Get:186 http://172.17.0.1/private/ jessie-staging/main libintl-perl all 1.23-1 [1209 kB]
Get:187 http://172.17.0.1/private/ jessie-staging/main libxml-namespacesupport-perl all 1.09-3 [15.3 kB]
Get:188 http://172.17.0.1/private/ jessie-staging/main libxml-sax-base-perl all 1.07-1 [23.1 kB]
Get:189 http://172.17.0.1/private/ jessie-staging/main libxml-sax-perl all 0.99+dfsg-2 [68.3 kB]
Get:190 http://172.17.0.1/private/ jessie-staging/main libxml-libxml-perl armhf 2.0010+dfsg-1 [394 kB]
Get:191 http://172.17.0.1/private/ jessie-staging/main texinfo armhf 5.1.dfsg.1-5 [1341 kB]
Get:192 http://172.17.0.1/private/ jessie-staging/main libbison-dev armhf 2:2.7.1.dfsg-1 [346 kB]
Get:193 http://172.17.0.1/private/ jessie-staging/main bison armhf 2:2.7.1.dfsg-1 [760 kB]
Get:194 http://172.17.0.1/private/ jessie-staging/main gettext armhf 0.18.3.1-1 [1837 kB]
Get:195 http://172.17.0.1/private/ jessie-staging/main intltool-debian all 0.35.0+20060710.1 [29.8 kB]
Get:196 http://172.17.0.1/private/ jessie-staging/main po-debconf all 1.0.16+nmu2 [223 kB]
Get:197 http://172.17.0.1/private/ jessie-staging/main debhelper all 9.20130921 [688 kB]
Get:198 http://172.17.0.1/private/ jessie-staging/main openjdk-7-jdk armhf 7u25-2.3.12-1+rpi1 [14.1 MB]
Get:199 http://172.17.0.1/private/ jessie-staging/main default-jdk armhf 1:1.7-49 [848 B]
Get:200 http://172.17.0.1/private/ jessie-staging/main fonts-cabin all 1.5-2 [139 kB]
Get:201 http://172.17.0.1/private/ jessie-staging/main fonts-comfortaa all 2.003-1 [133 kB]
Get:202 http://172.17.0.1/private/ jessie-staging/main fonts-dejavu-extra all 2.33+svn2514-3 [1758 kB]
Get:203 http://172.17.0.1/private/ jessie-staging/main fonts-font-awesome all 3.2.1~dfsg-1 [244 kB]
Get:204 http://172.17.0.1/private/ jessie-staging/main fonts-freefont-otf all 20120503-1 [4428 kB]
Get:205 http://172.17.0.1/private/ jessie-staging/main fonts-gfs-artemisia all 1.1-5 [259 kB]
Get:206 http://172.17.0.1/private/ jessie-staging/main fonts-gfs-complutum all 1.1-5 [47.9 kB]
Get:207 http://172.17.0.1/private/ jessie-staging/main fonts-gfs-didot all 1.1-5 [371 kB]
Get:208 http://172.17.0.1/private/ jessie-staging/main fonts-gfs-neohellenic all 1.1-4 [282 kB]
Get:209 http://172.17.0.1/private/ jessie-staging/main fonts-gfs-olga all 1.1-3 [36.0 kB]
Get:210 http://172.17.0.1/private/ jessie-staging/main fonts-gfs-solomos all 1.1-5 [40.6 kB]
Get:211 http://172.17.0.1/private/ jessie-staging/main fonts-inconsolata all 001.010-4 [65.6 kB]
Get:212 http://172.17.0.1/private/ jessie-staging/main fonts-linuxlibertine all 5.3.0-2 [1713 kB]
Get:213 http://172.17.0.1/private/ jessie-staging/main fonts-oflb-asana-math all 000.907-4 [297 kB]
Get:214 http://172.17.0.1/private/ jessie-staging/main fonts-sil-gentium all 20081126:1.02-12 [685 kB]
Get:215 http://172.17.0.1/private/ jessie-staging/main fonts-sil-gentium-basic all 1.1-5 [871 kB]
Get:216 http://172.17.0.1/private/ jessie-staging/main libgfortran-4.8-dev armhf 4.8.1-10+rpi1 [300 kB]
Get:217 http://172.17.0.1/private/ jessie-staging/main gfortran-4.8 armhf 4.8.1-10+rpi1 [5747 kB]
Get:218 http://172.17.0.1/private/ jessie-staging/main gfortran armhf 4:4.8.1-3 [1134 B]
Get:219 http://172.17.0.1/private/ jessie-staging/main libgirepository-1.0-1 armhf 1.36.0-2 [97.0 kB]
Get:220 http://172.17.0.1/private/ jessie-staging/main gir1.2-glib-2.0 armhf 1.36.0-2 [177 kB]
Get:221 http://172.17.0.1/private/ jessie-staging/main gir1.2-freedesktop armhf 1.36.0-2 [20.7 kB]
Get:222 http://172.17.0.1/private/ jessie-staging/main gir1.2-pango-1.0 armhf 1.32.5-5 [178 kB]
Get:223 http://172.17.0.1/private/ jessie-staging/main libblas3 armhf 1.2.20110419-7 [186 kB]
Get:224 http://172.17.0.1/private/ jessie-staging/main libblas-dev armhf 1.2.20110419-7 [201 kB]
Get:225 http://172.17.0.1/private/ jessie-staging/main libbz2-dev armhf 1.0.6-5 [33.8 kB]
Get:226 http://172.17.0.1/private/ jessie-staging/main libexpat1-dev armhf 2.1.0-4 [210 kB]
Get:227 http://172.17.0.1/private/ jessie-staging/main zlib1g-dev armhf 1:1.2.8.dfsg-1 [212 kB]
Get:228 http://172.17.0.1/private/ jessie-staging/main libfreetype6-dev armhf 2.4.9-1.1 [748 kB]
Get:229 http://172.17.0.1/private/ jessie-staging/main pkg-config armhf 0.26-1 [56.9 kB]
Get:230 http://172.17.0.1/private/ jessie-staging/main libfontconfig1-dev armhf 2.10.2-2 [867 kB]
Get:231 http://172.17.0.1/private/ jessie-staging/main xorg-sgml-doctools all 1:1.11-1 [21.9 kB]
Get:232 http://172.17.0.1/private/ jessie-staging/main x11proto-core-dev all 7.0.24-1 [779 kB]
Get:233 http://172.17.0.1/private/ jessie-staging/main libxau-dev armhf 1:1.0.8-1 [23.0 kB]
Get:234 http://172.17.0.1/private/ jessie-staging/main libxdmcp-dev armhf 1:1.1.1-1 [40.8 kB]
Get:235 http://172.17.0.1/private/ jessie-staging/main x11proto-input-dev all 2.3-1 [177 kB]
Get:236 http://172.17.0.1/private/ jessie-staging/main x11proto-kb-dev all 1.0.6-2 [269 kB]
Get:237 http://172.17.0.1/private/ jessie-staging/main xtrans-dev all 1.2.7-1 [112 kB]
Get:238 http://172.17.0.1/private/ jessie-staging/main libpthread-stubs0-dev armhf 0.3-4 [4042 B]
Get:239 http://172.17.0.1/private/ jessie-staging/main libxcb1-dev armhf 1.9.1-3 [98.5 kB]
Get:240 http://172.17.0.1/private/ jessie-staging/main libx11-dev armhf 2:1.6.1-1 [982 kB]
Get:241 http://172.17.0.1/private/ jessie-staging/main x11proto-render-dev all 2:0.11.1-2 [20.8 kB]
Get:242 http://172.17.0.1/private/ jessie-staging/main libxrender-dev armhf 1:0.9.8-1 [38.8 kB]
Get:243 http://172.17.0.1/private/ jessie-staging/main x11proto-xext-dev all 7.2.1-1 [273 kB]
Get:244 http://172.17.0.1/private/ jessie-staging/main libxext-dev armhf 2:1.3.2-1 [110 kB]
Get:245 http://172.17.0.1/private/ jessie-staging/main libpng12-dev armhf 1.2.49-4 [260 kB]
Get:246 http://172.17.0.1/private/ jessie-staging/main libice-dev armhf 2:1.0.8-2 [65.9 kB]
Get:247 http://172.17.0.1/private/ jessie-staging/main libsm-dev armhf 2:1.2.1-2 [35.6 kB]
Get:248 http://172.17.0.1/private/ jessie-staging/main libpixman-1-dev armhf 0.30.2-1 [477 kB]
Get:249 http://172.17.0.1/private/ jessie-staging/main libxcb-render0-dev armhf 1.9.1-3 [25.2 kB]
Get:250 http://172.17.0.1/private/ jessie-staging/main libxcb-shm0-dev armhf 1.9.1-3 [12.0 kB]
Get:251 http://172.17.0.1/private/ jessie-staging/main libdrm-dev armhf 2.4.46-3 [577 kB]
Get:252 http://172.17.0.1/private/ jessie-staging/main mesa-common-dev armhf 9.1.6-2 [300 kB]
Get:253 http://172.17.0.1/private/ jessie-staging/main libx11-xcb-dev armhf 2:1.6.1-1 [159 kB]
Get:254 http://172.17.0.1/private/ jessie-staging/main libxcb-dri2-0-dev armhf 1.9.1-3 [15.5 kB]
Get:255 http://172.17.0.1/private/ jessie-staging/main libxcb-glx0-dev armhf 1.9.1-3 [45.9 kB]
Get:256 http://172.17.0.1/private/ jessie-staging/main x11proto-fixes-dev all 1:5.0-2 [19.2 kB]
Get:257 http://172.17.0.1/private/ jessie-staging/main libxfixes-dev armhf 1:5.0.1-1 [24.1 kB]
Get:258 http://172.17.0.1/private/ jessie-staging/main x11proto-damage-dev all 1:1.2.1-2 [11.8 kB]
Get:259 http://172.17.0.1/private/ jessie-staging/main libxdamage-dev armhf 1:1.1.4-1 [14.3 kB]
Get:260 http://172.17.0.1/private/ jessie-staging/main x11proto-xf86vidmode-dev all 2.3.1-2 [6114 B]
Get:261 http://172.17.0.1/private/ jessie-staging/main libxxf86vm-dev armhf 1:1.1.3-1 [25.5 kB]
Get:262 http://172.17.0.1/private/ jessie-staging/main x11proto-dri2-dev all 2.8-2 [18.2 kB]
Get:263 http://172.17.0.1/private/ jessie-staging/main x11proto-gl-dev all 1.4.16-2 [32.1 kB]
Get:264 http://172.17.0.1/private/ jessie-staging/main libgl1-mesa-dev armhf 9.1.6-2 [34.7 kB]
Get:265 http://172.17.0.1/private/ jessie-staging/main libegl1-mesa-dev armhf 9.1.6-2 [45.9 kB]
Get:266 http://172.17.0.1/private/ jessie-staging/main libelfg0 armhf 0.8.13-3 [56.5 kB]
Get:267 http://172.17.0.1/private/ jessie-staging/main libglib2.0-data all 2.36.4-1 [1847 kB]
Get:268 http://172.17.0.1/private/ jessie-staging/main libglib2.0-bin armhf 2.36.4-1 [1060 kB]
Get:269 http://172.17.0.1/private/ jessie-staging/main libpcre3-dev armhf 1:8.31-2 [350 kB]
Get:270 http://172.17.0.1/private/ jessie-staging/main libglib2.0-dev armhf 2.36.4-1 [2113 kB]
Get:271 http://172.17.0.1/private/ jessie-staging/main libcairo2-dev armhf 1.12.16-2 [1225 kB]
Get:272 http://172.17.0.1/private/ jessie-staging/main libijs-0.35 armhf 0.35-8 [19.0 kB]
Get:273 http://172.17.0.1/private/ jessie-staging/main libjbig2dec0 armhf 0.11+20120125-1 [46.4 kB]
Get:274 http://172.17.0.1/private/ jessie-staging/main libgs9-common all 9.05~dfsg-8 [1981 kB]
Get:275 http://172.17.0.1/private/ jessie-staging/main libgs9 armhf 9.05~dfsg-8 [1546 kB]
Get:276 http://172.17.0.1/private/ jessie-staging/main libharfbuzz-dev armhf 0.9.19-1 [311 kB]
Get:277 http://172.17.0.1/private/ jessie-staging/main libjpeg8-dev armhf 8d-1 [238 kB]
Get:278 http://172.17.0.1/private/ jessie-staging/main libkpathsea6 armhf 2013.20130729.30972-2 [160 kB]
Get:279 http://172.17.0.1/private/ jessie-staging/main liblapack3 armhf 3.4.2+dfsg-4 [2288 kB]
Get:280 http://172.17.0.1/private/ jessie-staging/main liblapack-dev armhf 3.4.2+dfsg-4 [2564 kB]
Get:281 http://172.17.0.1/private/ jessie-staging/main liblzma-dev armhf 5.1.1alpha+20120614-2 [272 kB]
Get:282 http://172.17.0.1/private/ jessie-staging/main libtinfo-dev armhf 5.9+20130608-1 [92.5 kB]
Get:283 http://172.17.0.1/private/ jessie-staging/main libncurses5-dev armhf 5.9+20130608-1 [201 kB]
Get:284 http://172.17.0.1/private/ jessie-staging/main libxft-dev armhf 2.3.1-1 [68.1 kB]
Get:285 http://172.17.0.1/private/ jessie-staging/main libpango1.0-dev armhf 1.32.5-5 [397 kB]
Get:286 http://172.17.0.1/private/ jessie-staging/main libpaper-utils armhf 1.1.24+nmu2 [17.9 kB]
Get:287 http://172.17.0.1/private/ jessie-staging/main libptexenc1 armhf 2013.20130729.30972-2 [55.7 kB]
Get:288 http://172.17.0.1/private/ jessie-staging/main libreadline6-dev armhf 6.2+dfsg-0.1 [164 kB]
Get:289 http://172.17.0.1/private/ jessie-staging/main libreadline-dev armhf 6.2+dfsg-0.1 [898 B]
Get:290 http://172.17.0.1/private/ jessie-staging/main libtiff5-dev armhf 4.0.3-5 [355 kB]
Get:291 http://172.17.0.1/private/ jessie-staging/main x11proto-scrnsaver-dev all 1.2.2-1 [25.0 kB]
Get:292 http://172.17.0.1/private/ jessie-staging/main libxss-dev armhf 1:1.2.2-1 [22.7 kB]
Get:293 http://172.17.0.1/private/ jessie-staging/main libxt-dev armhf 1:1.1.4-1 [447 kB]
Get:294 http://172.17.0.1/private/ jessie-staging/main tex-common all 4.04 [639 kB]
Get:295 http://172.17.0.1/private/ jessie-staging/main luatex armhf 0.76.0-3 [3601 kB]
Get:296 http://172.17.0.1/private/ jessie-staging/main mpack armhf 1.6-8 [38.4 kB]
Get:297 http://172.17.0.1/private/ jessie-staging/main preview-latex-style all 11.87-1 [317 kB]
Get:298 http://172.17.0.1/private/ jessie-staging/main tcl8.5 armhf 8.5.14-2 [1579 kB]
Get:299 http://172.17.0.1/private/ jessie-staging/main tcl8.5-dev armhf 8.5.14-2 [1023 kB]
Get:300 http://172.17.0.1/private/ jessie-staging/main texi2html all 1.82+dfsg1-3 [449 kB]
Get:301 http://172.17.0.1/private/ jessie-staging/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
Get:302 http://172.17.0.1/private/ jessie-staging/main texlive-binaries armhf 2013.20130729.30972-2 [5951 kB]
Get:303 http://172.17.0.1/private/ jessie-staging/main texlive-base all 2013.20130918-1 [16.1 MB]
Get:304 http://172.17.0.1/private/ jessie-staging/main texlive-latex-base all 2013.20130918-1 [854 kB]
Get:305 http://172.17.0.1/private/ jessie-staging/main texlive-extra-utils all 2013.20130918-1 [10.1 MB]
Get:306 http://172.17.0.1/private/ jessie-staging/main otf-freefont all 20120503-1 [118 kB]
Get:307 http://172.17.0.1/private/ jessie-staging/main fonts-stix all 1.1.0-1 [763 kB]
Get:308 http://172.17.0.1/private/ jessie-staging/main texlive-fonts-extra all 2013.20130918-1 [155 MB]
Get:309 http://172.17.0.1/private/ jessie-staging/main texlive-fonts-recommended all 2013.20130918-1 [5426 kB]
Get:310 http://172.17.0.1/private/ jessie-staging/main texlive-generic-recommended all 2013.20130918-1 [2142 kB]
Get:311 http://172.17.0.1/private/ jessie-staging/main texlive-pictures all 2013.20130918-1 [2373 kB]
Get:312 http://172.17.0.1/private/ jessie-staging/main texlive-latex-recommended all 2013.20130918-1 [7099 kB]
Get:313 http://172.17.0.1/private/ jessie-staging/main texlive-latex-extra all 2013.20130918-1 [7055 kB]
Get:314 http://172.17.0.1/private/ jessie-staging/main tk8.5 armhf 8.5.14-2 [1123 kB]
Get:315 http://172.17.0.1/private/ jessie-staging/main tk8.5-dev armhf 8.5.14-2 [941 kB]
Get:316 http://172.17.0.1/private/ jessie-staging/main x11-xkb-utils armhf 7.7~1 [178 kB]
Get:317 http://172.17.0.1/private/ jessie-staging/main xauth armhf 1:1.0.7-1 [34.9 kB]
Get:318 http://172.17.0.1/private/ jessie-staging/main xfonts-encodings all 1:1.0.4-1 [584 kB]
Get:319 http://172.17.0.1/private/ jessie-staging/main xfonts-utils armhf 1:7.7~1 [92.2 kB]
Get:320 http://172.17.0.1/private/ jessie-staging/main xfonts-base all 1:1.0.3 [6181 kB]
Get:321 http://172.17.0.1/private/ jessie-staging/main xkb-data all 2.5.1-3 [645 kB]
Get:322 http://172.17.0.1/private/ jessie-staging/main xserver-common all 2:1.14.3-3 [1521 kB]
Get:323 http://172.17.0.1/private/ jessie-staging/main xvfb armhf 2:1.14.3-3 [844 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 423 MB in 24min 31s (287 kB/s)
(Reading database ... 12118 files and directories currently installed.)
Preparing to replace libgomp1:armhf 4.8.1-6+rpi1 (using .../libgomp1_4.8.1-10+rpi1_armhf.deb) ...
Unpacking replacement libgomp1:armhf ...
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Unpacking replacement gcc-4.8-base:armhf ...
Setting up gcc-4.8-base:armhf (4.8.1-10+rpi1) ...
(Reading database ... 12118 files and directories currently installed.)
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Unpacking replacement libstdc++6:armhf ...
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Unpacking replacement libgcc1:armhf ...
Setting up libgcc1:armhf (1:4.8.1-10+rpi1) ...
Setting up libstdc++6:armhf (4.8.1-10+rpi1) ...
Processing triggers for libc-bin ...
(Reading database ... 12118 files and directories currently installed.)
Preparing to replace libasan0:armhf 4.8.1-6+rpi1 (using .../libasan0_4.8.1-10+rpi1_armhf.deb) ...
Unpacking replacement libasan0:armhf ...
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Unpacking replacement libatomic1:armhf ...
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Unpacking replacement libstdc++-4.8-dev:armhf ...
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Unpacking replacement g++-4.8 ...
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Unpacking replacement gcc-4.8 ...
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Unpacking replacement libgcc-4.8-dev:armhf ...
Selecting previously unselected package libpipeline1:armhf.
Unpacking libpipeline1:armhf (from .../libpipeline1_1.2.4-1_armhf.deb) ...
Selecting previously unselected package libpopt0:armhf.
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Selecting previously unselected package libssl1.0.0:armhf.
Unpacking libssl1.0.0:armhf (from .../libssl1.0.0_1.0.1e-3+rpi1_armhf.deb) ...
Selecting previously unselected package groff-base.
Unpacking groff-base (from .../groff-base_1.22.2-3_armhf.deb) ...
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Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_armhf.deb) ...
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Selecting previously unselected package libgcrypt11:armhf.
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Selecting previously unselected package libp11-kit0:armhf.
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Selecting previously unselected package libtasn1-3:armhf.
Unpacking libtasn1-3:armhf (from .../libtasn1-3_2.14-3_armhf.deb) ...
Selecting previously unselected package libgnutls26:armhf.
Unpacking libgnutls26:armhf (from .../libgnutls26_2.12.23-7_armhf.deb) ...
Selecting previously unselected package libkeyutils1:armhf.
Unpacking libkeyutils1:armhf (from .../libkeyutils1_1.5.6-1_armhf.deb) ...
Selecting previously unselected package libkrb5support0:armhf.
Unpacking libkrb5support0:armhf (from .../libkrb5support0_1.11.3+dfsg-3_armhf.deb) ...
Selecting previously unselected package libk5crypto3:armhf.
Unpacking libk5crypto3:armhf (from .../libk5crypto3_1.11.3+dfsg-3_armhf.deb) ...
Selecting previously unselected package libkrb5-3:armhf.
Unpacking libkrb5-3:armhf (from .../libkrb5-3_1.11.3+dfsg-3_armhf.deb) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Unpacking libgssapi-krb5-2:armhf (from .../libgssapi-krb5-2_1.11.3+dfsg-3_armhf.deb) ...
Selecting previously unselected package libidn11:armhf.
Unpacking libidn11:armhf (from .../libidn11_1.28-1_armhf.deb) ...
Selecting previously unselected package libmagic1:armhf.
Unpacking libmagic1:armhf (from .../libmagic1_1%3a5.14-2_armhf.deb) ...
Selecting previously unselected package libsqlite3-0:armhf.
Unpacking libsqlite3-0:armhf (from .../libsqlite3-0_3.8.0.2-1_armhf.deb) ...
Selecting previously unselected package libwrap0:armhf.
Unpacking libwrap0:armhf (from .../libwrap0_7.6.q-24_armhf.deb) ...
Selecting previously unselected package libxml2:armhf.
Unpacking libxml2:armhf (from .../libxml2_2.9.1+dfsg1-3_armhf.deb) ...
Selecting previously unselected package libpython2.7-minimal.
Unpacking libpython2.7-minimal (from .../libpython2.7-minimal_2.7.5-8+rpi2_armhf.deb) ...
Selecting previously unselected package python2.7-minimal.
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Setting up libidn11:armhf (1.28-1) ...
Setting up libmagic1:armhf (1:5.14-2) ...
Setting up libsqlite3-0:armhf (3.8.0.2-1) ...
Setting up libwrap0:armhf (7.6.q-24) ...
Setting up libxml2:armhf (2.9.1+dfsg1-3) ...
Setting up libpython2.7-minimal (2.7.5-8+rpi2) ...
Setting up python2.7-minimal (2.7.5-8+rpi2) ...
Setting up fonts-droid (1:4.3-1) ...
Setting up fonts-junicode (0.7.8-1) ...
Setting up fonts-lato (1.104-4) ...
Setting up libasound2-data (1.0.27.2-1) ...
Setting up libasound2:armhf (1.0.27.2-1) ...
Setting up libasyncns0:armhf (0.8-4) ...
Setting up libffi6:armhf (3.0.13-4) ...
Setting up libglib2.0-0:armhf (2.36.4-1) ...
No schema files found: doing nothing.
Setting up libatk1.0-data (2.10.0-2) ...
Setting up libatk1.0-0:armhf (2.10.0-2) ...
Setting up libdrm2:armhf (2.4.46-3) ...
Setting up libglapi-mesa:armhf (9.1.6-2) ...
Setting up libllvm3.2:armhf (1:3.2repack-10+rpi1) ...
Setting up libxau6:armhf (1:1.0.8-1) ...
Setting up libxdmcp6:armhf (1:1.1.1-1) ...
Setting up libxcb1:armhf (1.9.1-3) ...
Setting up libxcb-dri2-0:armhf (1.9.1-3) ...
Setting up libgbm1:armhf (9.1.6-2) ...
Setting up libwayland-client0:armhf (1.2.1-1) ...
Setting up libwayland-server0:armhf (1.2.1-1) ...
Setting up libx11-data (2:1.6.1-1) ...
Setting up libx11-6:armhf (2:1.6.1-1) ...
Setting up libx11-xcb1:armhf (2:1.6.1-1) ...
Setting up libxcb-render0:armhf (1.9.1-3) ...
Setting up libxcb-shape0:armhf (1.9.1-3) ...
Setting up libxcb-xfixes0:armhf (1.9.1-3) ...
Setting up libegl1-mesa:armhf (9.1.6-2) ...
Setting up libexpat1:armhf (2.1.0-4) ...
Setting up libfreetype6:armhf (2.4.9-1.1) ...
Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
Setting up fonts-freefont-ttf (20120503-1) ...
Setting up ttf-freefont (20120503-1) ...
Setting up fontconfig-config (2.10.2-2) ...
Setting up libfontconfig1:armhf (2.10.2-2) ...
Setting up libxcb-glx0:armhf (1.9.1-3) ...
Setting up libxfixes3:armhf (1:5.0.1-1) ...
Setting up libxdamage1:armhf (1:1.1.4-1) ...
Setting up libxext6:armhf (2:1.3.2-1) ...
Setting up libxxf86vm1:armhf (1:1.1.3-1) ...
Setting up libgl1-mesa-glx:armhf (9.1.6-2) ...
Setting up libpixman-1-0:armhf (0.30.2-1) ...
Setting up libpng12-0:armhf (1.2.49-4) ...
Setting up libxcb-shm0:armhf (1.9.1-3) ...
Setting up libxrender1:armhf (1:0.9.8-1) ...
Setting up libcairo2:armhf (1.12.16-2) ...
Setting up libjpeg8:armhf (8d-1) ...
Setting up libjasper1:armhf (1.900.1-14) ...
Setting up libjbig0:armhf (2.0-2) ...
Setting up libtiff4:armhf (3.9.7-2) ...
Setting up libgdk-pixbuf2.0-common (2.28.2-1) ...
Setting up libgdk-pixbuf2.0-0:armhf (2.28.2-1) ...
Setting up libgtk2.0-common (2.24.21-1) ...
Setting up libavahi-common-data:armhf (0.6.31-2) ...
Setting up libavahi-common3:armhf (0.6.31-2) ...
Setting up libavahi-client3:armhf (0.6.31-2) ...
Setting up libcups2:armhf (1.6.3-1+rpi1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libdatrie1:armhf (0.2.6-2) ...
Setting up libthai0:armhf (0.1.19-2) ...
Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
Setting up libpango-1.0-0:armhf (1.32.5-5) ...
Setting up libgraphite2-3:armhf (1.2.3-1) ...
Setting up libharfbuzz0a:armhf (0.9.19-1) ...
Setting up libpangoft2-1.0-0:armhf (1.32.5-5) ...
Setting up libpangocairo-1.0-0:armhf (1.32.5-5) ...
Setting up libxcomposite1:armhf (1:0.4.4-1) ...
Setting up libxcursor1:armhf (1:1.1.14-1) ...
Setting up libxi6:armhf (2:1.7.2-1) ...
Setting up libxinerama1:armhf (2:1.1.3-1) ...
Setting up libxrandr2:armhf (2:1.4.1-1) ...
Setting up shared-mime-info (1.0-1) ...
Setting up libgtk2.0-0:armhf (2.24.21-1) ...
Setting up openssl (1.0.1e-3+rpi1) ...
Setting up ca-certificates (20130906) ...
Setting up java-common (0.49) ...
Setting up tzdata-java (2013d-1) ...
Setting up liblcms2-2:armhf (2.2+git20110628-2.2) ...
Setting up libnspr4:armhf (2:4.10-1) ...
Setting up libnss3:armhf (2:3.15.1-1) ...
Setting up libpcsclite1:armhf (1.8.8-4) ...
Setting up libgif4 (4.1.6-10) ...
Setting up x11-common (1:7.7+4) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libice6:armhf (2:1.0.8-2) ...
Setting up libjson-c2:armhf (0.11-3) ...
Setting up libsm6:armhf (2:1.2.1-2) ...
Setting up libogg0:armhf (1.3.1-1) ...
Setting up libflac8:armhf (1.3.0-2) ...
Setting up libvorbis0a:armhf (1.3.2-1.3) ...
Setting up libvorbisenc2:armhf (1.3.2-1.3) ...
Setting up libsndfile1:armhf (1.0.25-7) ...
Setting up libxtst6:armhf (2:1.2.2-1) ...
Setting up libpulse0:armhf (4.0-6) ...
Setting up libaudit-common (1:2.3.2-2) ...
Setting up libaudit1:armhf (1:2.3.2-2) ...
Setting up libcairo-gobject2:armhf (1.12.16-2) ...
Setting up liblzo2-2:armhf (2.06-1.2) ...
Setting up libcairo-script-interpreter2:armhf (1.12.16-2) ...
Setting up libcroco3:armhf (0.6.8-2) ...
Setting up libdrm-nouveau2:armhf (2.4.46-3) ...
Setting up libdrm-omap1:armhf (2.4.46-3) ...
Setting up libdrm-radeon1:armhf (2.4.46-3) ...
Setting up libopenvg1-mesa:armhf (9.1.6-2) ...
Setting up libegl1-mesa-drivers:armhf (9.1.6-2) ...
Setting up libfontenc1:armhf (1:1.1.2-1) ...
Setting up libgfortran3:armhf (4.8.1-10+rpi1) ...
Setting up libicu48:armhf (4.8.1.1-13) ...
Setting up libharfbuzz-icu0:armhf (0.9.19-1) ...
Setting up liblcms1:armhf (1.19.dfsg-1.2) ...
Setting up libxft2:armhf (2.3.1-1) ...
Setting up libpangoxft-1.0-0:armhf (1.32.5-5) ...
Setting up libpaper1:armhf (1.1.24+nmu2) ...

Creating config file /etc/papersize with new version
Setting up libpcrecpp0:armhf (1:8.31-2) ...
Setting up libopenjpeg2:armhf (1.3+dfsg-4.6) ...
Setting up libpoppler19:armhf (0.18.4-8) ...
Setting up libsigsegv2:armhf (2.10-2) ...
Setting up libtiff5:armhf (4.0.3-5) ...
Setting up libtiffxx5:armhf (4.0.3-5) ...
Setting up libunistring0:armhf (0.9.3-5) ...
Setting up libxt6:armhf (1:1.1.4-1) ...
Setting up libxmu6:armhf (2:1.1.1-1) ...
Setting up libxpm4:armhf (1:3.5.10-1) ...
Setting up libxaw7:armhf (2:1.0.11-1) ...
Setting up libxfont1:armhf (1:1.4.6-1) ...
Setting up libxkbfile1:armhf (1:1.0.8-1) ...
Setting up libxmuu1:armhf (2:1.1.1-1) ...
Setting up libxss1:armhf (1:1.2.2-1) ...
Setting up poppler-data (0.4.6-4) ...
Setting up libjbig-dev:armhf (2.0-2) ...
Setting up file (1:5.14-2) ...
Setting up gettext-base (0.18.3.1-1) ...
Setting up mime-support (3.54) ...
update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode
Setting up libpython2.7-stdlib (2.7.5-8+rpi2) ...
Setting up m4 (1.4.16-5) ...
Setting up python2.7 (2.7.5-8+rpi2) ...
Setting up python-minimal (2.7.5-5) ...
Setting up libpython-stdlib:armhf (2.7.5-5) ...
Setting up python (2.7.5-5) ...
Setting up libtext-unidecode-perl (0.04-2) ...
Setting up libintl-perl (1.23-1) ...
Setting up libxml-namespacesupport-perl (1.09-3) ...
Setting up libxml-sax-base-perl (1.07-1) ...
Setting up libxml-sax-perl (0.99+dfsg-2) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...

Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libxml-libxml-perl (2.0010+dfsg-1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up texinfo (5.1.dfsg.1-5) ...
Running mktexlsr. This may take some time. ... done.
Setting up libbison-dev:armhf (2:2.7.1.dfsg-1) ...
Setting up bison (2:2.7.1.dfsg-1) ...
update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
Setting up gettext (0.18.3.1-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
Setting up debhelper (9.20130921) ...
Setting up fonts-cabin (1.5-2) ...
Setting up fonts-comfortaa (2.003-1) ...
Setting up fonts-dejavu-extra (2.33+svn2514-3) ...
Setting up fonts-font-awesome (3.2.1~dfsg-1) ...
Setting up fonts-freefont-otf (20120503-1) ...
Setting up fonts-gfs-artemisia (1.1-5) ...
Setting up fonts-gfs-complutum (1.1-5) ...
Setting up fonts-gfs-didot (1.1-5) ...
Setting up fonts-gfs-neohellenic (1.1-4) ...
Setting up fonts-gfs-olga (1.1-3) ...
Setting up fonts-gfs-solomos (1.1-5) ...
Setting up fonts-inconsolata (001.010-4) ...
Setting up fonts-linuxlibertine (5.3.0-2) ...
Setting up fonts-oflb-asana-math (000.907-4) ...
Setting up fonts-sil-gentium (20081126:1.02-12) ...
Setting up fonts-sil-gentium-basic (1.1-5) ...
Setting up libgfortran-4.8-dev:armhf (4.8.1-10+rpi1) ...
Setting up gfortran-4.8 (4.8.1-10+rpi1) ...
Setting up gfortran (4:4.8.1-3) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libgirepository-1.0-1 (1.36.0-2) ...
Setting up gir1.2-glib-2.0 (1.36.0-2) ...
Setting up gir1.2-freedesktop (1.36.0-2) ...
Setting up gir1.2-pango-1.0 (1.32.5-5) ...
Setting up libblas3 (1.2.20110419-7) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
Setting up libblas-dev (1.2.20110419-7) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libbz2-dev:armhf (1.0.6-5) ...
Setting up libexpat1-dev:armhf (2.1.0-4) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-1) ...
Setting up libfreetype6-dev (2.4.9-1.1) ...
Setting up pkg-config (0.26-1) ...
Setting up libfontconfig1-dev (2.10.2-2) ...
Setting up xorg-sgml-doctools (1:1.11-1) ...
Setting up x11proto-core-dev (7.0.24-1) ...
Setting up libxau-dev:armhf (1:1.0.8-1) ...
Setting up libxdmcp-dev:armhf (1:1.1.1-1) ...
Setting up x11proto-input-dev (2.3-1) ...
Setting up x11proto-kb-dev (1.0.6-2) ...
Setting up xtrans-dev (1.2.7-1) ...
Setting up libpthread-stubs0-dev:armhf (0.3-4) ...
Setting up libxcb1-dev:armhf (1.9.1-3) ...
Setting up libx11-dev:armhf (2:1.6.1-1) ...
Setting up x11proto-render-dev (2:0.11.1-2) ...
Setting up libxrender-dev:armhf (1:0.9.8-1) ...
Setting up x11proto-xext-dev (7.2.1-1) ...
Setting up libxext-dev:armhf (2:1.3.2-1) ...
Setting up libpng12-dev (1.2.49-4) ...
Setting up libice-dev:armhf (2:1.0.8-2) ...
Setting up libsm-dev:armhf (2:1.2.1-2) ...
Setting up libpixman-1-dev (0.30.2-1) ...
Setting up libxcb-render0-dev:armhf (1.9.1-3) ...
Setting up libxcb-shm0-dev:armhf (1.9.1-3) ...
Setting up libdrm-dev (2.4.46-3) ...
Setting up mesa-common-dev (9.1.6-2) ...
Setting up libx11-xcb-dev (2:1.6.1-1) ...
Setting up libxcb-dri2-0-dev:armhf (1.9.1-3) ...
Setting up libxcb-glx0-dev:armhf (1.9.1-3) ...
Setting up x11proto-fixes-dev (1:5.0-2) ...
Setting up libxfixes-dev (1:5.0.1-1) ...
Setting up x11proto-damage-dev (1:1.2.1-2) ...
Setting up libxdamage-dev (1:1.1.4-1) ...
Setting up x11proto-xf86vidmode-dev (2.3.1-2) ...
Setting up libxxf86vm-dev:armhf (1:1.1.3-1) ...
Setting up x11proto-dri2-dev (2.8-2) ...
Setting up x11proto-gl-dev (1.4.16-2) ...
Setting up libgl1-mesa-dev (9.1.6-2) ...
Setting up libegl1-mesa-dev (9.1.6-2) ...
Setting up libelfg0 (0.8.13-3) ...
Setting up libglib2.0-data (2.36.4-1) ...
Setting up libglib2.0-bin (2.36.4-1) ...
Setting up libpcre3-dev:armhf (1:8.31-2) ...
Setting up libglib2.0-dev (2.36.4-1) ...
Setting up libcairo2-dev (1.12.16-2) ...
Setting up libijs-0.35 (0.35-8) ...
Setting up libjbig2dec0 (0.11+20120125-1) ...
Setting up libgs9-common (9.05~dfsg-8) ...
Setting up libharfbuzz-dev (0.9.19-1) ...
Setting up libjpeg8-dev:armhf (8d-1) ...
Setting up libkpathsea6 (2013.20130729.30972-2) ...
Setting up liblapack3 (3.4.2+dfsg-4) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-4) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up liblzma-dev:armhf (5.1.1alpha+20120614-2) ...
Setting up libtinfo-dev:armhf (5.9+20130608-1) ...
Setting up libncurses5-dev:armhf (5.9+20130608-1) ...
Setting up libxft-dev (2.3.1-1) ...
Setting up libpango1.0-dev (1.32.5-5) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libptexenc1 (2013.20130729.30972-2) ...
Setting up libreadline6-dev:armhf (6.2+dfsg-0.1) ...
Setting up libreadline-dev:armhf (6.2+dfsg-0.1) ...
Setting up libtiff5-dev:armhf (4.0.3-5) ...
Setting up x11proto-scrnsaver-dev (1.2.2-1) ...
Setting up libxss-dev:armhf (1:1.2.2-1) ...
Setting up libxt-dev:armhf (1:1.1.4-1) ...
Setting up tex-common (4.04) ...
Running mktexlsr. This may take some time... done.
texlive-base is not ready, delaying updmap-sys call
texlive-base is not ready, skipping fmtutil-sys --all call
Setting up luatex (0.76.0-3) ...
texlive-base is not ready, cannot create formats
Setting up mpack (1.6-8) ...
Setting up preview-latex-style (11.87-1) ...
Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
Setting up tcl8.5-dev (8.5.14-2) ...
Setting up texi2html (1.82+dfsg1-3) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
Setting up otf-freefont (20120503-1) ...
Setting up fonts-stix (1.1.0-1) ...
Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
Setting up tk8.5-dev (8.5.14-2) ...
Setting up x11-xkb-utils (7.7~1) ...
Setting up xauth (1:1.0.7-1) ...
Setting up xfonts-encodings (1:1.0.4-1) ...
Setting up xfonts-utils (1:7.7~1) ...
Setting up xfonts-base (1:1.0.3) ...
Setting up xkb-data (2.5.1-3) ...
Setting up xserver-common (2:1.14.3-3) ...
Setting up xvfb (2:1.14.3-3) ...
Setting up libcupsimage2:armhf (1.6.3-1+rpi1) ...
Setting up libcupsfilters1:armhf (1.0.34-3+b1) ...
Setting up libgs9 (9.05~dfsg-8) ...
Setting up texlive-binaries (2013.20130729.30972-2) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Building format(s) --refresh.
	This may take some time... done.
Setting up texlive-base (2013.20130918-1) ...
/usr/bin/tl-paper: setting paper size for dvips to a4.
/usr/bin/tl-paper: setting paper size for dvipdfmx to a4.
/usr/bin/tl-paper: setting paper size for xdvi to a4.
/usr/bin/tl-paper: setting paper size for pdftex to a4.
Running mktexlsr. This may take some time... done.
Building format(s) --all.
	This may take some time... done.
Setting up openjdk-7-jre-headless:armhf (7u25-2.3.12-1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/orbd to provide /usr/bin/orbd (orbd) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/servertool to provide /usr/bin/servertool (servertool) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/tnameserv to provide /usr/bin/tnameserv (tnameserv) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up default-jre-headless (1:1.7-49) ...
Setting up openjdk-7-jre:armhf (7u25-2.3.12-1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/jre/bin/policytool to provide /usr/bin/policytool (policytool) in auto mode
Setting up default-jre (1:1.7-49) ...
Setting up openjdk-7-jdk:armhf (7u25-2.3.12-1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/appletviewer to provide /usr/bin/appletviewer (appletviewer) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/extcheck to provide /usr/bin/extcheck (extcheck) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/idlj to provide /usr/bin/idlj (idlj) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/javah to provide /usr/bin/javah (javah) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jhat to provide /usr/bin/jhat (jhat) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jsadebugd to provide /usr/bin/jsadebugd (jsadebugd) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/native2ascii to provide /usr/bin/native2ascii (native2ascii) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/schemagen to provide /usr/bin/schemagen (schemagen) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/wsgen to provide /usr/bin/wsgen (wsgen) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/wsimport to provide /usr/bin/wsimport (wsimport) in auto mode
update-alternatives: using /usr/lib/jvm/java-7-openjdk-armhf/bin/xjc to provide /usr/bin/xjc (xjc) in auto mode
Setting up default-jdk (1:1.7-49) ...
Setting up ca-certificates-java (20130815) ...
done.
Setting up openjdk-7-jre-lib (7u25-2.3.12-1+rpi1) ...
Setting up libatk-wrapper-java (0.30.4-4) ...
Setting up libatk-wrapper-java-jni:armhf (0.30.4-4) ...
Processing triggers for tex-common ...
Running mktexlsr. This may take some time... done.
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up texlive-fonts-extra (2013.20130918-1) ...
Setting up texlive-fonts-recommended (2013.20130918-1) ...
Setting up texlive-generic-recommended (2013.20130918-1) ...
Setting up texlive-pictures (2013.20130918-1) ...
Setting up texlive-latex-base (2013.20130918-1) ...
Running mktexlsr. This may take some time... done.
Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-latex-base.cnf.
	This may take some time... done.
Processing triggers for tex-common ...
Running mktexlsr. This may take some time... done.
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up texlive-extra-utils (2013.20130918-1) ...
Setting up texlive-latex-recommended (2013.20130918-1) ...
Processing triggers for tex-common ...
Running mktexlsr. This may take some time... done.
Setting up texlive-latex-extra (2013.20130918-1) ...
Processing triggers for tex-common ...
Running mktexlsr. This may take some time... done.
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Setting up sbuild-build-depends-r-base-dummy (0.invalid.0) ...
Processing triggers for libc-bin ...
Processing triggers for ca-certificates ...
Updating certificates in /etc/ssl/certs... 164 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d....
Adding debian:cacert.org_class3.pem
Adding debian:cacert.org_root.pem
Adding debian:A-Trust-nQual-03.pem
Adding debian:ACEDICOM_Root.pem
Warning: there was a problem reading the certificate file /etc/ssl/certs/AC_Ra?z_Certic?mara_S.A..pem. Message:
  /etc/ssl/certs/AC_Ra?z_Certic?mara_S.A..pem (No such file or directory)
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AddTrust_External_Root.pem
Adding debian:AddTrust_Low-Value_Services_Root.pem
Adding debian:AddTrust_Public_Services_Root.pem
Adding debian:AddTrust_Qualified_Certificates_Root.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:America_Online_Root_Certification_Authority_1.pem
Adding debian:America_Online_Root_Certification_Authority_2.pem
Adding debian:ApplicationCA_-_Japanese_Government.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_CA_1.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_CA_1.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig.pem
Adding debian:CA_Disig_Root_R1.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CNNIC_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:Camerfirma_Chambers_of_Commerce_Root.pem
Adding debian:Camerfirma_Global_Chambersign_Root.pem
Adding debian:Certigna.pem
Warning: there was a problem reading the certificate file /etc/ssl/certs/Certinomis_-_Autorit?_Racine.pem. Message:
  /etc/ssl/certs/Certinomis_-_Autorit?_Racine.pem (No such file or directory)
Adding debian:Certplus_Class_2_Primary_CA.pem
Adding debian:Certum_Root_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Chambers_of_Commerce_Root_-_2008.pem
Adding debian:China_Internet_Network_Information_Center_EV_Certificates_Root.pem
Adding debian:ComSign_CA.pem
Adding debian:ComSign_Secured_CA.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Comodo_Secure_Services_root.pem
Adding debian:Comodo_Trusted_Services_root.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DST_ACES_CA_X6.pem
Adding debian:DST_Root_CA_X3.pem
Adding debian:Deutsche_Telekom_Root_CA_2.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:Digital_Signature_Trust_Co._Global_CA_1.pem
Adding debian:Digital_Signature_Trust_Co._Global_CA_3.pem
Adding debian:E-Guven_Kok_Elektronik_Sertifika_Hizmet_Saglayicisi.pem
Warning: there was a problem reading the certificate file /etc/ssl/certs/EBG_Elektronik_Sertifika_Hizmet_Sa?lay?c?s?.pem. Message:
  /etc/ssl/certs/EBG_Elektronik_Sertifika_Hizmet_Sa?lay?c?s?.pem (No such file or directory)
Adding debian:EC-ACC.pem
Adding debian:EE_Certification_Centre_Root_CA.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust.net_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Equifax_Secure_CA.pem
Adding debian:Equifax_Secure_Global_eBusiness_CA.pem
Adding debian:Equifax_Secure_eBusiness_CA_1.pem
Adding debian:Firmaprofesional_Root_CA.pem
Adding debian:GTE_CyberTrust_Global_Root.pem
Adding debian:GeoTrust_Global_CA.pem
Adding debian:GeoTrust_Global_CA_2.pem
Adding debian:GeoTrust_Primary_Certification_Authority.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem
Adding debian:GeoTrust_Universal_CA.pem
Adding debian:GeoTrust_Universal_CA_2.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:Global_Chambersign_Root_-_2008.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:IGC_A.pem
Adding debian:Izenpe.com.pem
Adding debian:Juur-SK.pem
Adding debian:Microsec_e-Szigno_Root_CA.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Warning: there was a problem reading the certificate file /etc/ssl/certs/NetLock_Arany_=Class_Gold=_F?tan?s?tv?ny.pem. Message:
  /etc/ssl/certs/NetLock_Arany_=Class_Gold=_F?tan?s?tv?ny.pem (No such file or directory)
Adding debian:NetLock_Business_=Class_B=_Root.pem
Adding debian:NetLock_Express_=Class_C=_Root.pem
Adding debian:NetLock_Notary_=Class_A=_Root.pem
Adding debian:NetLock_Qualified_=Class_QA=_Root.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem
Adding debian:PSCProcert.pem
Adding debian:QuoVadis_Root_CA.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:RSA_Root_Certificate_1.pem
Adding debian:RSA_Security_2048_v3.pem
Adding debian:Root_CA_Generalitat_Valenciana.pem
Adding debian:S-TRUST_Authentication_and_Encryption_Root_CA_2005_PN.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_EV_RootCA1.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Sonera_Class_1_Root_CA.pem
Adding debian:Sonera_Class_2_Root_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:StartCom_Certification_Authority.pem
Adding debian:StartCom_Certification_Authority_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Platinum_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:Swisscom_Root_CA_1.pem
Adding debian:Swisscom_Root_CA_2.pem
Adding debian:Swisscom_Root_EV_CA_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TC_TrustCenter_Class_2_CA_II.pem
Adding debian:TC_TrustCenter_Class_3_CA_II.pem
Adding debian:TC_TrustCenter_Universal_CA_I.pem
Adding debian:TDC_Internet_Root_CA.pem
Adding debian:TDC_OCES_Root_CA.pem
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_1.pem
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_2.pem
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_2007.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:Taiwan_GRCA.pem
Adding debian:Thawte_Premium_Server_CA.pem
Adding debian:Thawte_Server_CA.pem
Adding debian:Trustis_FPS_Root_CA.pem
Warning: there was a problem reading the certificate file /etc/ssl/certs/T?B?TAK_UEKAE_K?k_Sertifika_Hizmet_Sa?lay?c?s?_-_S?r?m_3.pem. Message:
  /etc/ssl/certs/T?B?TAK_UEKAE_K?k_Sertifika_Hizmet_Sa?lay?c?s?_-_S?r?m_3.pem (No such file or directory)
Adding debian:UTN_DATACorp_SGC_Root_CA.pem
Adding debian:UTN_USERFirst_Email_Root_CA.pem
Adding debian:UTN_USERFirst_Hardware_Root_CA.pem
Adding debian:ValiCert_Class_1_VA.pem
Adding debian:ValiCert_Class_2_VA.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem
Adding debian:VeriSign_Universal_Root_Certification_Authority.pem
Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority.pem
Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority_-_G2.pem
Adding debian:Verisign_Class_1_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G2.pem
Adding debian:Verisign_Class_2_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G2.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Verisign_Class_4_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:Visa_eCommerce_Root.pem
Adding debian:WellsSecure_Public_Root_Certificate_Authority.pem
Adding debian:Wells_Fargo_Root_CA.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:thawte_Primary_Root_CA.pem
Adding debian:thawte_Primary_Root_CA_-_G2.pem
Adding debian:thawte_Primary_Root_CA_-_G3.pem
Adding debian:spi-cacert-2008.pem
done.
done.

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment                                                            │
└──────────────────────────────────────────────────────────────────────────────┘

Kernel: Linux 3.11.0-armv7-x13 armhf (armv7l)
Toolchain package versions: binutils_2.23.52.20130828-1 dpkg-dev_1.16.10 g++-4.6_4.6.4-4+rpi1 g++-4.8_4.8.1-10+rpi1 gcc-4.6_4.6.4-4+rpi1 gcc-4.8_4.8.1-10+rpi1 libc6-dev_2.17-92+rpi1 libstdc++-4.8-dev_4.8.1-10+rpi1 libstdc++6_4.8.1-10+rpi1 libstdc++6-4.6-dev_4.6.4-4+rpi1 linux-libc-dev_3.10.1-1+rpi1+b2
Package versions: apt_0.9.11.4+rpi1 base-files_7.2+rpi1 base-passwd_3.5.28 bash_4.2+dfsg-1 binutils_2.23.52.20130828-1 bison_2:2.7.1.dfsg-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.5 build-essential_11.6 bzip2_1.0.6-5 ca-certificates_20130906 ca-certificates-java_20130815 coreutils_8.21-1 cpio_2.11+dfsg-1 cpp_4:4.8.1-3 cpp-4.6_4.6.4-4+rpi1 cpp-4.8_4.8.1-10+rpi1 dash_0.5.7-3 debconf_1.5.51 debfoster_2.7-1.2 debhelper_9.20130921 debianutils_4.4 default-jdk_1:1.7-49 default-jre_1:1.7-49 default-jre-headless_1:1.7-49 diffutils_1:3.3-1 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.8-1 e2fsprogs_1.42.8-1 fakeroot_1.18.4-2 file_1:5.14-2 findutils_4.4.2-6 fontconfig_2.10.2-2 fontconfig-config_2.10.2-2 fonts-cabin_1.5-2 fonts-comfortaa_2.003-1 fonts-dejavu-core_2.33+svn2514-3 fonts-dejavu-extra_2.33+svn2514-3 fonts-droid_1:4.3-1 fonts-font-awesome_3.2.1~dfsg-1 fonts-freefont-otf_20120503-1 fonts-freefont-ttf_20120503-1 fonts-gfs-artemisia_1.1-5 fonts-gfs-complutum_1.1-5 fonts-gfs-didot_1.1-5 fonts-gfs-neohellenic_1.1-4 fonts-gfs-olga_1.1-3 fonts-gfs-solomos_1.1-5 fonts-inconsolata_001.010-4 fonts-junicode_0.7.8-1 fonts-lato_1.104-4 fonts-linuxlibertine_5.3.0-2 fonts-oflb-asana-math_000.907-4 fonts-sil-gentium_20081126:1.02-12 fonts-sil-gentium-basic_1.1-5 fonts-stix_1.1.0-1 g++_4:4.8.1-3 g++-4.6_4.6.4-4+rpi1 g++-4.8_4.8.1-10+rpi1 gcc_4:4.8.1-3 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.4-4+rpi1 gcc-4.6-base_4.6.4-4+rpi1 gcc-4.7-base_4.7.3-4+rpi1 gcc-4.8_4.8.1-10+rpi1 gcc-4.8-base_4.8.1-10+rpi1 gettext_0.18.3.1-1 gettext-base_0.18.3.1-1 gfortran_4:4.8.1-3 gfortran-4.8_4.8.1-10+rpi1 gir1.2-freedesktop_1.36.0-2 gir1.2-glib-2.0_1.36.0-2 gir1.2-pango-1.0_1.32.5-5 gnupg_1.4.14-1 gpgv_1.4.14-1 grep_2.14-3 groff-base_1.22.2-3 gzip_1.6-2 hostname_3.14 initramfs-tools_0.113 initscripts_2.88dsf-43 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.1 java-common_0.49 klibc-utils_2.0.1-3.1+rpi1 kmod_9-3 libacl1_2.2.52-1 libapt-pkg4.12_0.9.11.4+rpi1 libarchive-extract-perl_0.68-1 libasan0_4.8.1-10+rpi1 libasound2_1.0.27.2-1 libasound2-data_1.0.27.2-1 libasprintf0c2_0.18.3.1-1 libasyncns0_0.8-4 libatk-wrapper-java_0.30.4-4 libatk-wrapper-java-jni_0.30.4-4 libatk1.0-0_2.10.0-2 libatk1.0-data_2.10.0-2 libatomic1_4.8.1-10+rpi1 libattr1_1:2.4.47-1 libaudit-common_1:2.3.2-2 libaudit1_1:2.3.2-2 libavahi-client3_0.6.31-2 libavahi-common-data_0.6.31-2 libavahi-common3_0.6.31-2 libbison-dev_2:2.7.1.dfsg-1 libblas-dev_1.2.20110419-7 libblas3_1.2.20110419-7 libblkid1_2.20.1-5.5 libbz2-1.0_1.0.6-5 libbz2-dev_1.0.6-5 libc-bin_2.17-92+rpi1 libc-dev-bin_2.17-92+rpi1 libc6_2.17-92+rpi1 libc6-dev_2.17-92+rpi1 libcairo-gobject2_1.12.16-2 libcairo-script-interpreter2_1.12.16-2 libcairo2_1.12.16-2 libcairo2-dev_1.12.16-2 libcap2_1:2.22-1.2 libclass-isa-perl_0.36-5 libcloog-isl4_0.18.0-2 libcomerr2_1.42.8-1 libcroco3_0.6.8-2 libcups2_1.6.3-1+rpi1 libcupsfilters1_1.0.34-3+b1 libcupsimage2_1.6.3-1+rpi1 libdatrie1_0.2.6-2 libdb5.1_5.1.29-6 libdbus-1-3_1.6.14-1 libdpkg-perl_1.16.10 libdrm-dev_2.4.46-3 libdrm-nouveau2_2.4.46-3 libdrm-omap1_2.4.46-3 libdrm-radeon1_2.4.46-3 libdrm2_2.4.46-3 libegl1-mesa_9.1.6-2 libegl1-mesa-dev_9.1.6-2 libegl1-mesa-drivers_9.1.6-2 libelfg0_0.8.13-3 libexpat1_2.1.0-4 libexpat1-dev_2.1.0-4 libffi6_3.0.13-4 libflac8_1.3.0-2 libfontconfig1_2.10.2-2 libfontconfig1-dev_2.10.2-2 libfontenc1_1:1.1.2-1 libfreetype6_2.4.9-1.1 libfreetype6-dev_2.4.9-1.1 libgbm1_9.1.6-2 libgc1c2_1:7.2d-5 libgcc-4.8-dev_4.8.1-10+rpi1 libgcc1_1:4.8.1-10+rpi1 libgcrypt11_1.5.3-2 libgdbm3_1.8.3-12 libgdk-pixbuf2.0-0_2.28.2-1 libgdk-pixbuf2.0-common_2.28.2-1 libgfortran-4.8-dev_4.8.1-10+rpi1 libgfortran3_4.8.1-10+rpi1 libgif4_4.1.6-10 libgirepository-1.0-1_1.36.0-2 libgl1-mesa-dev_9.1.6-2 libgl1-mesa-glx_9.1.6-2 libglapi-mesa_9.1.6-2 libglib2.0-0_2.36.4-1 libglib2.0-bin_2.36.4-1 libglib2.0-data_2.36.4-1 libglib2.0-dev_2.36.4-1 libgmp10_2:5.1.2+dfsg-3 libgnutls26_2.12.23-7 libgomp1_4.8.1-10+rpi1 libgpg-error0_1.12-0.2 libgraphite2-3_1.2.3-1 libgs9_9.05~dfsg-8 libgs9-common_9.05~dfsg-8 libgssapi-krb5-2_1.11.3+dfsg-3 libgtk2.0-0_2.24.21-1 libgtk2.0-common_2.24.21-1 libharfbuzz-dev_0.9.19-1 libharfbuzz-icu0_0.9.19-1 libharfbuzz0a_0.9.19-1 libice-dev_2:1.0.8-2 libice6_2:1.0.8-2 libicu48_4.8.1.1-13 libidn11_1.28-1 libijs-0.35_0.35-8 libintl-perl_1.23-1 libisl10_0.11.2-1 libjasper1_1.900.1-14 libjbig-dev_2.0-2 libjbig0_2.0-2 libjbig2dec0_0.11+20120125-1 libjpeg8_8d-1 libjpeg8-dev_8d-1 libjson-c2_0.11-3 libk5crypto3_1.11.3+dfsg-3 libkeyutils1_1.5.6-1 libklibc_2.0.1-3.1+rpi1 libkmod2_9-3 libkpathsea6_2013.20130729.30972-2 libkrb5-3_1.11.3+dfsg-3 libkrb5support0_1.11.3+dfsg-3 liblapack-dev_3.4.2+dfsg-4 liblapack3_3.4.2+dfsg-4 liblcms1_1.19.dfsg-1.2 liblcms2-2_2.2+git20110628-2.2 libllvm3.2_1:3.2repack-10+rpi1 liblzma-dev_5.1.1alpha+20120614-2 liblzma5_5.1.1alpha+20120614-2 liblzo2-2_2.06-1.2 libmagic1_1:5.14-2 libmodule-pluggable-perl_4.8-1 libmount1_2.20.1-5.5 libmpc2_0.9-4 libmpc3_1.0.1-1 libmpfr4_3.1.1-2 libncurses5_5.9+20130608-1 libncurses5-dev_5.9+20130608-1 libncursesw5_5.9+20130608-1 libnspr4_2:4.10-1 libnss3_2:3.15.1-1 libogg0_1.3.1-1 libopenjpeg2_1.3+dfsg-4.6 libopenvg1-mesa_9.1.6-2 libp11-kit0_0.18.5-3 libpam-modules_1.1.3-9 libpam-modules-bin_1.1.3-9 libpam-runtime_1.1.3-9 libpam0g_1.1.3-9 libpango-1.0-0_1.32.5-5 libpango1.0-dev_1.32.5-5 libpangocairo-1.0-0_1.32.5-5 libpangoft2-1.0-0_1.32.5-5 libpangoxft-1.0-0_1.32.5-5 libpaper-utils_1.1.24+nmu2 libpaper1_1.1.24+nmu2 libpcre3_1:8.31-2 libpcre3-dev_1:8.31-2 libpcrecpp0_1:8.31-2 libpcsclite1_1.8.8-4 libpipeline1_1.2.4-1 libpixman-1-0_0.30.2-1 libpixman-1-dev_0.30.2-1 libpng12-0_1.2.49-4 libpng12-dev_1.2.49-4 libpod-latex-perl_0.61-1 libpoppler19_0.18.4-8 libpopt0_1.16-7 libprocps0_1:3.3.4-2 libptexenc1_2013.20130729.30972-2 libpthread-stubs0-dev_0.3-4 libpulse0_4.0-6 libpython-stdlib_2.7.5-5 libpython2.7-minimal_2.7.5-8+rpi2 libpython2.7-stdlib_2.7.5-8+rpi2 libreadline-dev_6.2+dfsg-0.1 libreadline6_6.2+dfsg-0.1 libreadline6-dev_6.2+dfsg-0.1 libselinux1_2.1.13-2 libsemanage-common_2.1.10-2 libsemanage1_2.1.10-2 libsepol1_2.1.9-2 libsigsegv2_2.10-2 libslang2_2.2.4-15 libsm-dev_2:1.2.1-2 libsm6_2:1.2.1-2 libsndfile1_1.0.25-7 libsqlite3-0_3.8.0.2-1 libss2_1.42.8-1 libssl1.0.0_1.0.1e-3+rpi1 libstdc++-4.8-dev_4.8.1-10+rpi1 libstdc++6_4.8.1-10+rpi1 libstdc++6-4.6-dev_4.6.4-4+rpi1 libswitch-perl_2.16-2 libtasn1-3_2.14-3 libterm-ui-perl_0.36-1 libtext-unidecode-perl_0.04-2 libthai-data_0.1.19-2 libthai0_0.1.19-2 libtiff4_3.9.7-2 libtiff5_4.0.3-5 libtiff5-dev_4.0.3-5 libtiffxx5_4.0.3-5 libtimedate-perl_1.2000-1 libtinfo-dev_5.9+20130608-1 libtinfo5_5.9+20130608-1 libudev0_175-7.2 libudev1_204-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-23.2 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.5 libvorbis0a_1.3.2-1.3 libvorbisenc2_1.3.2-1.3 libwayland-client0_1.2.1-1 libwayland-server0_1.2.1-1 libwrap0_7.6.q-24 libx11-6_2:1.6.1-1 libx11-data_2:1.6.1-1 libx11-dev_2:1.6.1-1 libx11-xcb-dev_2:1.6.1-1 libx11-xcb1_2:1.6.1-1 libxau-dev_1:1.0.8-1 libxau6_1:1.0.8-1 libxaw7_2:1.0.11-1 libxcb-dri2-0_1.9.1-3 libxcb-dri2-0-dev_1.9.1-3 libxcb-glx0_1.9.1-3 libxcb-glx0-dev_1.9.1-3 libxcb-render0_1.9.1-3 libxcb-render0-dev_1.9.1-3 libxcb-shape0_1.9.1-3 libxcb-shm0_1.9.1-3 libxcb-shm0-dev_1.9.1-3 libxcb-xfixes0_1.9.1-3 libxcb1_1.9.1-3 libxcb1-dev_1.9.1-3 libxcomposite1_1:0.4.4-1 libxcursor1_1:1.1.14-1 libxdamage-dev_1:1.1.4-1 libxdamage1_1:1.1.4-1 libxdmcp-dev_1:1.1.1-1 libxdmcp6_1:1.1.1-1 libxext-dev_2:1.3.2-1 libxext6_2:1.3.2-1 libxfixes-dev_1:5.0.1-1 libxfixes3_1:5.0.1-1 libxfont1_1:1.4.6-1 libxft-dev_2.3.1-1 libxft2_2.3.1-1 libxi6_2:1.7.2-1 libxinerama1_2:1.1.3-1 libxkbfile1_1:1.0.8-1 libxml-libxml-perl_2.0010+dfsg-1 libxml-namespacesupport-perl_1.09-3 libxml-sax-base-perl_1.07-1 libxml-sax-perl_0.99+dfsg-2 libxml2_2.9.1+dfsg1-3 libxmu6_2:1.1.1-1 libxmuu1_2:1.1.1-1 libxpm4_1:3.5.10-1 libxrandr2_2:1.4.1-1 libxrender-dev_1:0.9.8-1 libxrender1_1:0.9.8-1 libxss-dev_1:1.2.2-1 libxss1_1:1.2.2-1 libxt-dev_1:1.1.4-1 libxt6_1:1.1.4-1 libxtst6_2:1.2.2-1 libxxf86vm-dev_1:1.1.3-1 libxxf86vm1_1:1.1.3-1 linux-libc-dev_3.10.1-1+rpi1+b2 login_1:4.1.5.1-1 lsb-base_4.1+Debian8+rpi1 luatex_0.76.0-3 m4_1.4.16-5 make_3.81-8.2 makedev_2.3.1-93 man-db_2.6.5-2 mawk_1.3.3-17 mesa-common-dev_9.1.6-2 mime-support_3.54 mount_2.20.1-5.5 mpack_1.6-8 multiarch-support_2.17-92+rpi1 ncurses-base_5.9+20130608-1 ncurses-bin_5.9+20130608-1 openjdk-7-jdk_7u25-2.3.12-1+rpi1 openjdk-7-jre_7u25-2.3.12-1+rpi1 openjdk-7-jre-headless_7u25-2.3.12-1+rpi1 openjdk-7-jre-lib_7u25-2.3.12-1+rpi1 openssl_1.0.1e-3+rpi1 otf-freefont_20120503-1 passwd_1:4.1.5.1-1 patch_2.7.1-3 perl_5.18.1-4 perl-base_5.18.1-4 perl-modules_5.18.1-4 pkg-config_0.26-1 plymouth_0.8.8-6+deb8u1 po-debconf_1.0.16+nmu2 poppler-data_0.4.6-4 preview-latex-style_11.87-1 procps_1:3.3.4-2 python_2.7.5-5 python-minimal_2.7.5-5 python2.7_2.7.5-8+rpi2 python2.7-minimal_2.7.5-8+rpi2 raspbian-archive-keyring_20120528.2 readline-common_6.2+dfsg-0.1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-base-dummy_0.invalid.0 sed_4.2.2-2 sensible-utils_0.0.9 shared-mime-info_1.0-1 sysv-rc_2.88dsf-43 sysvinit_2.88dsf-43 sysvinit-utils_2.88dsf-43 tar_1.26+dfsg-8 tcl8.5_8.5.14-2 tcl8.5-dev_8.5.14-2 tex-common_4.04 texi2html_1.82+dfsg1-3 texinfo_5.1.dfsg.1-5 texlive-base_2013.20130918-1 texlive-binaries_2013.20130729.30972-2 texlive-extra-utils_2013.20130918-1 texlive-fonts-extra_2013.20130918-1 texlive-fonts-recommended_2013.20130918-1 texlive-generic-recommended_2013.20130918-1 texlive-latex-base_2013.20130918-1 texlive-latex-extra_2013.20130918-1 texlive-latex-recommended_2013.20130918-1 texlive-pictures_2013.20130918-1 tk8.5_8.5.14-2 tk8.5-dev_8.5.14-2 ttf-dejavu-core_2.33+svn2514-3 ttf-freefont_20120503-1 tzdata_2013d-1 tzdata-java_2013d-1 ucf_3.0027+nmu1 udev_204-5 util-linux_2.20.1-5.5 x11-common_1:7.7+4 x11-xkb-utils_7.7~1 x11proto-core-dev_7.0.24-1 x11proto-damage-dev_1:1.2.1-2 x11proto-dri2-dev_2.8-2 x11proto-fixes-dev_1:5.0-2 x11proto-gl-dev_1.4.16-2 x11proto-input-dev_2.3-1 x11proto-kb-dev_1.0.6-2 x11proto-render-dev_2:0.11.1-2 x11proto-scrnsaver-dev_1.2.2-1 x11proto-xext-dev_7.2.1-1 x11proto-xf86vidmode-dev_2.3.1-2 xauth_1:1.0.7-1 xdg-utils_1.1.0~rc1+git20111210-7 xfonts-base_1:1.0.3 xfonts-encodings_1:1.0.4-1 xfonts-utils_1:7.7~1 xkb-data_2.5.1-3 xorg-sgml-doctools_1:1.11-1 xserver-common_2:1.14.3-3 xtrans-dev_1.2.7-1 xvfb_2:1.14.3-3 xz-utils_5.1.1alpha+20120614-2 zlib1g_1:1.2.8.dfsg-1 zlib1g-dev_1:1.2.8.dfsg-1

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build                                                                        │
└──────────────────────────────────────────────────────────────────────────────┘


Unpack source
─────────────

gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Wed Sep 25 11:12:53 2013 UTC using DSA key ID 91B0D3B7
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./r-base_3.0.2-1.dsc
dpkg-source: info: extracting r-base in r-base-3.0.2
dpkg-source: info: unpacking r-base_3.0.2.orig.tar.gz
dpkg-source: info: applying r-base_3.0.2-1.diff.gz
dpkg-source: info: upstream files that have been modified: 
 r-base-3.0.2/src/library/tools/R/install.R

Check disc space
────────────────

Sufficient free space for build

User Environment
────────────────

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=POSIX
LOGNAME=root
LS_OPTIONS=--color=auto
MAIL=/var/mail/root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/root
SCHROOT_ALIAS_NAME=jessie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=jessie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=jessie-staging-armhf-sbuild-ead5c6ea-a76e-4a65-84bb-9ccf04e3f9f1
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
SHLVL=1
SSH_CLIENT=192.168.1.2 45410 22
SSH_CONNECTION=192.168.1.2 45410 192.168.1.45 22
SSH_TTY=/dev/pts/0
TERM=xterm
USER=root
XDG_SESSION_COOKIE=106ef489ba27ee071ab233f6518d3bce-1380046912.711892-759150774
_=/etc/init.d/buildd

dpkg-buildpackage
─────────────────

dpkg-buildpackage: source package r-base
dpkg-buildpackage: source version 3.0.2-1
 dpkg-source --before-build r-base-3.0.2
dpkg-buildpackage: host architecture armhf
 fakeroot debian/rules clean
*** clean ***
dh_testdir
dh_testroot
rm -f	configure-stamp \
		build-stamp build-indep-stamp build-arch-stamp \
		make-stamp make-arch-stamp make-indep-stamp \
		install-indep-stamp install-arch-stamp \
		check-stamp 
[ ! -f Makefile ] || /usr/bin/make distclean
rm -f `find . -name "*~"`
rm -rf debian/tmp debian/files* core debian/substvars
rm -f doc/html/function.html doc/html/packages.html
rm -f modules/*.so src/unix/Rscript
dh_clean
 debian/rules build-arch
*** configure ***
#automake
#autoconf
dh_testdir
R_PAPERSIZE=letter				\
	R_BROWSER=xdg-open				\
	PAGER=/usr/bin/pager				\
	PERL=/usr/bin/perl				\
	R_UNZIPCMD=/usr/bin/unzip			\
	R_ZIPCMD=/usr/bin/zip				\
	R_PRINTCMD=/usr/bin/lpr				\
	LIBnn=lib					\
	AWK=/usr/bin/awk                                \
	CC="gcc -std=gnu99"					\
	CXX=g++						\
	F77=gfortran					\
	FC=gfortran					\
	CFLAGS="-O3 -pipe  -g"				\
	CXXFLAGS="-O3 -pipe  -g"				\
	FFLAGS="-O3 -pipe  -g"				\
	FCFLAGS="-O3 -pipe  -g"				\
	CPPFLAGS=					\
	LDFLAGS=					\
	FLIBS=						\
	rsharedir=/usr/share/R/share			\
	rincludedir=/usr/share/R/include		\
	rdocdir=/usr/share/R/doc			\
	./configure --prefix=/usr			\
		    --with-cairo			\
		    --with-jpeglib			\
		    --with-readline			\
		    --with-tcltk			\
		    --with-system-bzlib			\
		    --with-system-pcre			\
		    --with-system-zlib			\
		    --mandir=/usr/share/man		\
		    --infodir=/usr/share/info		\
		    --datadir=/usr/share/R/share	\
		    --includedir=/usr/share/R/include	\
		    --with-blas		\
		    --with-lapack		\
		    --enable-R-profiling		\
		    --enable-R-shlib			\
		    --enable-memory-profiling		\
		    --without-recommended-packages	\
		    --build arm-linux-gnueabihf
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking for working aclocal... missing
checking for working autoconf... missing
checking for working automake... missing
checking for working autoheader... missing
checking for gawk... /usr/bin/awk
checking whether ln -s works... yes
checking for bison... bison -y
checking for ar... ar
checking for a BSD-compatible install... /usr/bin/install -c
checking for sed... /bin/sed
checking for which... /usr/bin/which
checking for /usr/bin/pager... /usr/bin/pager
checking for gtar... no
checking for gnutar... no
checking for tar... /bin/tar
checking for tex... /usr/bin/tex
checking for pdftex... /usr/bin/pdftex
checking for pdflatex... /usr/bin/pdflatex
checking for makeindex... /usr/bin/makeindex
checking for makeinfo... /usr/bin/makeinfo
checking whether makeinfo version is at least 4.7... yes
checking for ginstall-info... no
checking for install-info... /usr/sbin/install-info
checking for texi2dvi... /usr/bin/texi2dvi
checking for kpsewhich... /usr/bin/kpsewhich
/usr/share/texlive/texmf-dist/tex/latex/inconsolata/zi4.sty
checking for unzip... /usr/bin/unzip
checking for zip... /usr/bin/zip
checking for gzip... /bin/gzip
checking for bzip2... /bin/bzip2
using default browser ... xdg-open
checking for acroread... no
checking for acroread4... no
checking for xdg-open... /usr/bin/xdg-open
checking for notangle... false
checking for realpath... false
checking for pkg-config... /usr/bin/pkg-config
checking for gcc... gcc -std=gnu99
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc -std=gnu99 accepts -g... yes
checking for gcc -std=gnu99 option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -std=gnu99 -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking whether gcc -std=gnu99 needs -traditional... no
checking how to run the C preprocessor... gcc -std=gnu99 -E
defining F77 to be gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking how to run the C++ preprocessor... g++ -E
checking whether __attribute__((visibility())) is supported... yes
checking whether gcc -std=gnu99 accepts -fvisibility... yes
checking whether gfortran accepts -fvisibility... yes
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for gcc... gcc
checking whether we are using the GNU Objective C compiler... no
checking whether gcc accepts -g... no
checking for Objective C++ compiler... trying some possibilities
checking whether g++ can compile ObjC++... no
checking whether  can compile ObjC++... no
no working compiler found
checking for a sed that does not truncate output... (cached) /bin/sed
checking for fgrep... /bin/grep -F
checking for ld used by gcc -std=gnu99... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 805306365
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc -std=gnu99 object... ok
checking for dlfcn.h... yes
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether g++ accepts -g... (cached) yes
checking how to run the C++ preprocessor... g++ -E
checking whether we are using the GNU Fortran 77 compiler... (cached) yes
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checking for objdir... .libs
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checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
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checking if libtool supports shared libraries... yes
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checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
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checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
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checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
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checking sys/time.h presence... yes
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checking sys/utsname.h presence... yes
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checking whether sigsetjmp is declared... yes
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checking return type of signal handlers... void
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checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for gcc -std=gnu99 option to accept ISO C99... none needed
checking for gcc -std=gnu99 option to accept ISO Standard C... (cached) none needed
checking for inline... inline
checking size of int... 4
checking size of long... 4
checking size of long long... 8
checking size of double... 8
checking size of size_t... 4
checking size of long double... 8
checking whether we can compute C Make dependencies... yes, using $(CC) -MM
checking whether gcc -std=gnu99 supports -c -o FILE.lo... yes
checking for gcc -std=gnu99 option to support OpenMP... -fopenmp
checking how to get verbose linking output from gfortran... -v
checking for Fortran 77 libraries of gfortran...  -L/usr/lib/gcc/arm-linux-gnueabihf/4.8 -L/usr/lib/gcc/arm-linux-gnueabihf/4.8/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.8/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm
checking how to get verbose linking output from gcc -std=gnu99... -v
checking for C libraries of gcc -std=gnu99...  -L/usr/lib/gcc/arm-linux-gnueabihf/4.8 -L/usr/lib/gcc/arm-linux-gnueabihf/4.8/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/4.8/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgcc_s
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking whether gfortran appends underscores to external names... yes
checking whether gfortran appends extra underscores to external names... no
checking whether mixed C/Fortran code can be run... yes
checking whether gfortran and gcc -std=gnu99 agree on int and double... yes
checking whether gfortran and gcc -std=gnu99 agree on double complex... yes
checking for gfortran option to support OpenMP... -fopenmp
checking whether g++ accepts -M for generating dependencies... yes
checking for g++ option to support OpenMP... -fopenmp
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checking for working alloca.h... yes
checking for alloca... yes
checking whether alloca is declared... yes
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checking whether hypot exists and is declared... yes
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checking whether fdopen exists and is declared... yes
checking whether popen exists and is declared... yes
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checking whether unsetenv exists and is declared... yes
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checking whether getrusage exists and is declared... yes
checking whether getpriority exists and is declared... yes
checking whether chmod exists and is declared... yes
checking whether mkfifo exists and is declared... yes
checking whether stat exists and is declared... yes
checking whether umask exists and is declared... yes
checking whether gettimeofday exists and is declared... yes
checking whether utimes exists and is declared... yes
checking whether times exists and is declared... yes
checking whether access exists and is declared... yes
checking whether chdir exists and is declared... yes
checking whether execv exists and is declared... yes
checking whether ftruncate exists and is declared... yes
checking whether getcwd exists and is declared... yes
checking whether geteuid exists and is declared... yes
checking whether getuid exists and is declared... yes
checking whether link exists and is declared... yes
checking whether readlink exists and is declared... yes
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checking whether sysconf exists and is declared... yes
checking whether sched_setaffinity exists and is declared... yes
checking whether sched_getaffinity exists and is declared... yes
checking whether utime exists and is declared... yes
checking for clock_gettime in -lrt... yes
checking whether clock_gettime exists and is declared... yes
checking whether timespec_get exists and is declared... yes
checking for putenv... yes
checking whether putenv is declared... yes
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checking whether vasprintf is declared... yes
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checking whether realpath is declared... yes
checking whether glob exists and is declared... yes
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checking whether isfinite is declared... yes
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checking whether you have IEEE 754 floating-point arithmetic... yes
checking whether putenv("FOO") can unset an environment variable... yes
checking whether putenv("FOO=") can unset an environment variable... no
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checking whether mkdtemp is declared... yes
checking whether strdup is declared... yes
checking whether strncasecmp is declared... yes
checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for __setfpucw... no
checking for working calloc... yes
checking for working isfinite... yes
checking for working log1p... yes
checking whether ftell works correctly on files opened for append... yes
checking for working sigaction... yes
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checking complex.h presence... yes
checking for complex.h... yes
checking for double complex... yes
checking whether C99 double complex is supported... yes
checking whether cabs exists and is declared... yes
checking whether carg exists and is declared... yes
checking whether cexp exists and is declared... yes
checking whether clog exists and is declared... yes
checking whether csqrt exists and is declared... yes
checking whether cpow exists and is declared... yes
checking whether ccos exists and is declared... yes
checking whether csin exists and is declared... yes
checking whether ctan exists and is declared... yes
checking whether cacos exists and is declared... yes
checking whether casin exists and is declared... yes
checking whether catan exists and is declared... yes
checking whether ccosh exists and is declared... yes
checking whether csinh exists and is declared... yes
checking whether ctanh exists and is declared... yes
checking for cblas_cdotu_sub in vecLib framework... no
checking for dgemm_... no
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checking for dgemm_ in -lblas... yes
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checking for dgemm_ in -lblas... (cached) yes
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checking for iconvlist... no
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         extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking wchar.h usability... yes
checking wchar.h presence... yes
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checking for X... libraries , headers 
checking for gethostbyname... yes
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checking X11/Intrinsic.h presence... yes
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checking for XtToolkitInitialize in -lXt... yes
using X11 ... yes
checking for KeySym... yes
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checking whether PCRE support needs to be compiled... no
checking whether leap seconds are treated according to POSIX... yes
checking for inline... inline
checking for sys/time.h... (cached) yes
checking for stdlib.h... (cached) yes
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checking for sys/param.h... (cached) yes
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checking for setitimer... yes
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checking for _FILE_OFFSET_BITS value needed for large files... 64
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checking whether KERN_USRSTACK sysctl is supported... no
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checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
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checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for Fortran flag to compile .f90 files... none
checking for Fortran flag to compile .f95 files... none
checking for gfortran option to support OpenMP... -fopenmp
checking whether NLS is requested... yes

Configuring src/extra/intl directory
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking whether we are using the GNU C Library 2 or newer... yes
checking for ranlib... (cached) ranlib
checking for simple visibility declarations... yes
checking for stdint.h... yes
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checking for working mmap... yes
checking whether integer division by zero raises SIGFPE... yes
checking for inttypes.h... yes
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checking whether the inttypes.h PRIxNN macros are broken... no
checking whether imported symbols can be declared weak... yes
checking for multithread API to use... none
checking argz.h usability... yes
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checking for inttypes.h... (cached) yes
checking for limits.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for getcwd... yes
checking for getegid... yes
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checking for getuid... yes
checking for mempcpy... (cached) yes
checking for munmap... yes
checking for stpcpy... yes
checking for strcasecmp... yes
checking for strdup... (cached) yes
checking for strtoul... yes
checking for tsearch... yes
checking for argz_count... yes
checking for argz_stringify... yes
checking for argz_next... yes
checking for __fsetlocking... yes
checking whether feof_unlocked is declared... yes
checking whether fgets_unlocked is declared... yes
checking for iconv... (cached) yes
checking for iconv declaration... (cached) 
         extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for NL_LOCALE_NAME macro... yes
checking for bison... bison
checking version of bison... 2.7.12, ok
checking for long long int... yes
checking for long double... yes
checking for wchar_t... yes
checking for wint_t... yes
checking for intmax_t... yes
checking whether printf() supports POSIX/XSI format strings... yes
checking whether we are using the GNU C Library 2.1 or newer... yes
checking for stdint.h... (cached) yes
checking for SIZE_MAX... yes
checking for stdint.h... (cached) yes
checking for CFPreferencesCopyAppValue... no
checking for CFLocaleCopyCurrent... no
checking for ptrdiff_t... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for asprintf... yes
checking for fwprintf... yes
checking for putenv... (cached) yes
checking for setenv... yes
checking for setlocale... yes
checking for snprintf... yes
checking for wcslen... yes
checking whether _snprintf is declared... no
checking whether _snwprintf is declared... no
checking whether getc_unlocked is declared... yes
checking for nl_langinfo and CODESET... (cached) yes
checking for LC_MESSAGES... yes
checking for shared library run path origin... done
checking for CFPreferencesCopyAppValue... (cached) no
checking for CFLocaleCopyCurrent... (cached) no
checking whether included gettext is requested... no
checking for GNU gettext in libc... yes
checking whether to use NLS... yes
checking where the gettext function comes from... libc
Finished configuring src/extra/intl directory

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config.status: executing stamp-h commands

R is now configured for arm-unknown-linux-gnueabihf

  Source directory:          .
  Installation directory:    /usr

  C compiler:                gcc -std=gnu99  -O3 -pipe  -g
  Fortran 77 compiler:       gfortran  -O3 -pipe  -g

  C++ compiler:              g++  -O3 -pipe  -g
  Fortran 90/95 compiler:    gfortran -O3 -pipe  -g
  Obj-C compiler:	      

  Interfaces supported:      X11, tcltk
  External libraries:        readline, BLAS(generic), LAPACK(generic), lzma
  Additional capabilities:   PNG, JPEG, TIFF, NLS, cairo
  Options enabled:           shared R library, R profiling, memory profiling

  Recommended packages:      no

touch configure-stamp
*** make-arch ***
/usr/bin/make		CFLAGS="-O3 -pipe  -g"			\
			CXXFLAGS="-O3 -pipe  -g"			\
			FFLAGS="-O3 -pipe  -g"			\
			FCFLAGS="-O3 -pipe  -g"			\
			CC="gcc -std=gnu99"				\
			CXX=g++			\
			F77=gfortran			\
			LDFLAGS="-Wl,-O1"			\
			R
make[1]: Entering directory `/«PKGBUILDDIR»'
make[2]: Entering directory `/«PKGBUILDDIR»/m4'
make[2]: Nothing to be done for `R'.
make[2]: Leaving directory `/«PKGBUILDDIR»/m4'
make[2]: Entering directory `/«PKGBUILDDIR»/tools'
make[2]: Nothing to be done for `R'.
make[2]: Leaving directory `/«PKGBUILDDIR»/tools'
make[2]: Entering directory `/«PKGBUILDDIR»/doc'
make[3]: Entering directory `/«PKGBUILDDIR»/doc/html'
make[3]: Leaving directory `/«PKGBUILDDIR»/doc/html'
make[3]: Entering directory `/«PKGBUILDDIR»/doc/manual'
make[3]: Nothing to be done for `R'.
make[3]: Leaving directory `/«PKGBUILDDIR»/doc/manual'
make[2]: Leaving directory `/«PKGBUILDDIR»/doc'
make[2]: Entering directory `/«PKGBUILDDIR»/etc'
make[2]: Leaving directory `/«PKGBUILDDIR»/etc'
make[2]: Entering directory `/«PKGBUILDDIR»/share'
make[2]: Leaving directory `/«PKGBUILDDIR»/share'
make[2]: Entering directory `/«PKGBUILDDIR»/src'
make[3]: Entering directory `/«PKGBUILDDIR»/src/scripts'
creating src/scripts/R.fe
make[4]: Entering directory `/«PKGBUILDDIR»/src/scripts'
mkdir -p -- ../../bin
make[4]: Leaving directory `/«PKGBUILDDIR»/src/scripts'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/scripts'
make[3]: Entering directory `/«PKGBUILDDIR»/src/include'
mkdir -p -- ../../include
make[4]: Entering directory `/«PKGBUILDDIR»/src/include/R_ext'
mkdir -p -- ../../../include/R_ext
make[4]: Leaving directory `/«PKGBUILDDIR»/src/include/R_ext'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/include'
make[3]: Entering directory `/«PKGBUILDDIR»/src/extra'
make[4]: Entering directory `/«PKGBUILDDIR»/src/extra/tre'
make[5]: Entering directory `/«PKGBUILDDIR»/src/extra/tre'
making regcomp.d from regcomp.c
making regerror.d from regerror.c
making regexec.d from regexec.c
making tre-ast.d from tre-ast.c
making tre-compile.d from tre-compile.c
making tre-match-approx.d from tre-match-approx.c
making tre-match-backtrack.d from tre-match-backtrack.c
making tre-match-parallel.d from tre-match-parallel.c
making tre-mem.d from tre-mem.c
making tre-parse.d from tre-parse.c
making tre-stack.d from tre-stack.c
making xmalloc.d from xmalloc.c
make[5]: Leaving directory `/«PKGBUILDDIR»/src/extra/tre'
make[5]: Entering directory `/«PKGBUILDDIR»/src/extra/tre'
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c regcomp.c -o regcomp.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c regerror.c -o regerror.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c regexec.c -o regexec.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c tre-ast.c -o tre-ast.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c tre-compile.c -o tre-compile.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c tre-mem.c -o tre-mem.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c tre-parse.c -o tre-parse.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c tre-stack.c -o tre-stack.o
gcc -std=gnu99 -I. -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c xmalloc.c -o xmalloc.o
rm -f libtre.a
ar cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o
ranlib libtre.a
make[5]: Leaving directory `/«PKGBUILDDIR»/src/extra/tre'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/extra/tre'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/extra'
make[3]: Entering directory `/«PKGBUILDDIR»/src/appl'
make[4]: Entering directory `/«PKGBUILDDIR»/src/appl'
making integrate.d from integrate.c
making interv.d from interv.c
making maxcol.d from maxcol.c
making optim.d from optim.c
making pretty.d from pretty.c
making uncmin.d from uncmin.c
make[4]: Leaving directory `/«PKGBUILDDIR»/src/appl'
make[4]: Entering directory `/«PKGBUILDDIR»/src/appl'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c integrate.c -o integrate.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c interv.c -o interv.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c maxcol.c -o maxcol.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c optim.c -o optim.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pretty.c -o pretty.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c uncmin.c -o uncmin.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dchdc.f -o dchdc.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dpbfa.f -o dpbfa.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dpbsl.f -o dpbsl.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dpoco.f -o dpoco.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dpodi.f -o dpodi.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dpofa.f -o dpofa.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dposl.f -o dposl.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dqrdc.f -o dqrdc.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dqrdc2.f -o dqrdc2.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dqrls.f -o dqrls.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dqrsl.f -o dqrsl.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dqrutl.f -o dqrutl.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dsvdc.f -o dsvdc.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dtrco.f -o dtrco.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c dtrsl.f -o dtrsl.o
rm -f libappl.a
ar cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o 
ranlib libappl.a
make[4]: Leaving directory `/«PKGBUILDDIR»/src/appl'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/appl'
make[3]: Entering directory `/«PKGBUILDDIR»/src/nmath'
make[4]: Entering directory `/«PKGBUILDDIR»/src/nmath'
making mlutils.d from mlutils.c
making d1mach.d from d1mach.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
making fmin2.d from fmin2.c
making fprec.d from fprec.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making sign.d from sign.c
making fsign.d from fsign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making expm1.d from expm1.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making stirlerr.d from stirlerr.c
making bd0.d from bd0.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making sexp.d from sexp.c
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making dunif.d from dunif.c
making punif.d from punif.c
making qunif.d from qunif.c
making runif.d from runif.c
making dnorm.d from dnorm.c
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
making rnorm.d from rnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dnf.d from dnf.c
making dt.d from dt.c
making pt.d from pt.c
making qt.d from qt.c
making rt.d from rt.c
making dnt.d from dnt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making rnchisq.d from rnchisq.c
making dbinom.d from dbinom.c
making pbinom.d from pbinom.c
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making rpois.d from rpois.c
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making qnf.d from qnf.c
making qnt.d from qnt.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making toms708.d from toms708.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
make[4]: Leaving directory `/«PKGBUILDDIR»/src/nmath'
make[4]: Entering directory `/«PKGBUILDDIR»/src/nmath'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c mlutils.c -o mlutils.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c d1mach.c -o d1mach.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c i1mach.c -o i1mach.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c fmax2.c -o fmax2.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c fmin2.c -o fmin2.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c fprec.c -o fprec.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c fround.c -o fround.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c ftrunc.c -o ftrunc.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c sign.c -o sign.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c fsign.c -o fsign.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c imax2.c -o imax2.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c imin2.c -o imin2.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c chebyshev.c -o chebyshev.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c log1p.c -o log1p.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c expm1.c -o expm1.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c lgammacor.c -o lgammacor.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c gammalims.c -o gammalims.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c stirlerr.c -o stirlerr.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c bd0.c -o bd0.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c gamma.c -o gamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c lgamma.c -o lgamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c gamma_cody.c -o gamma_cody.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c beta.c -o beta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c lbeta.c -o lbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c polygamma.c -o polygamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c bessel_i.c -o bessel_i.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c bessel_j.c -o bessel_j.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c bessel_k.c -o bessel_k.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c bessel_y.c -o bessel_y.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c choose.c -o choose.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c snorm.c -o snorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c sexp.c -o sexp.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dgamma.c -o dgamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pgamma.c -o pgamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qgamma.c -o qgamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rgamma.c -o rgamma.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dbeta.c -o dbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pbeta.c -o pbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qbeta.c -o qbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rbeta.c -o rbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dunif.c -o dunif.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c punif.c -o punif.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qunif.c -o qunif.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c runif.c -o runif.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dnorm.c -o dnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pnorm.c -o pnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qnorm.c -o qnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rnorm.c -o rnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dlnorm.c -o dlnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c plnorm.c -o plnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qlnorm.c -o qlnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rlnorm.c -o rlnorm.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c df.c -o df.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pf.c -o pf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qf.c -o qf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rf.c -o rf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dnf.c -o dnf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dt.c -o dt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pt.c -o pt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qt.c -o qt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rt.c -o rt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dnt.c -o dnt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dchisq.c -o dchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pchisq.c -o pchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qchisq.c -o qchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rchisq.c -o rchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rnchisq.c -o rnchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dbinom.c -o dbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pbinom.c -o pbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qbinom.c -o qbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rbinom.c -o rbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rmultinom.c -o rmultinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dcauchy.c -o dcauchy.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pcauchy.c -o pcauchy.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qcauchy.c -o qcauchy.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rcauchy.c -o rcauchy.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dexp.c -o dexp.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pexp.c -o pexp.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qexp.c -o qexp.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rexp.c -o rexp.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dgeom.c -o dgeom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pgeom.c -o pgeom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qgeom.c -o qgeom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rgeom.c -o rgeom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dhyper.c -o dhyper.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c phyper.c -o phyper.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qhyper.c -o qhyper.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rhyper.c -o rhyper.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dnbinom.c -o dnbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pnbinom.c -o pnbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qnbinom.c -o qnbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rnbinom.c -o rnbinom.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dpois.c -o dpois.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c ppois.c -o ppois.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qpois.c -o qpois.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rpois.c -o rpois.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dweibull.c -o dweibull.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pweibull.c -o pweibull.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qweibull.c -o qweibull.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rweibull.c -o rweibull.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dlogis.c -o dlogis.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c plogis.c -o plogis.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qlogis.c -o qlogis.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rlogis.c -o rlogis.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dnchisq.c -o dnchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pnchisq.c -o pnchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qnchisq.c -o qnchisq.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dnbeta.c -o dnbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pnbeta.c -o pnbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qnbeta.c -o qnbeta.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pnf.c -o pnf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c pnt.c -o pnt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qnf.c -o qnf.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qnt.c -o qnt.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c ptukey.c -o ptukey.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qtukey.c -o qtukey.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c toms708.c -o toms708.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c wilcox.c -o wilcox.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c signrank.c -o signrank.o
rm -rf libnmath.a
ar cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o
ranlib libnmath.a
make[4]: Leaving directory `/«PKGBUILDDIR»/src/nmath'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/nmath'
make[3]: Entering directory `/«PKGBUILDDIR»/src/unix'
config.status: creating src/unix/Makefile
make[3]: Leaving directory `/«PKGBUILDDIR»/src/unix'
make[3]: Entering directory `/«PKGBUILDDIR»/src/unix'
make[4]: Entering directory `/«PKGBUILDDIR»/src/unix'
making Rembedded.d from Rembedded.c
making dynload.d from dynload.c
making system.d from system.c
making sys-unix.d from sys-unix.c
making sys-std.d from sys-std.c
making X11.d from X11.c
make[4]: Leaving directory `/«PKGBUILDDIR»/src/unix'
make[4]: Entering directory `/«PKGBUILDDIR»/src/unix'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c Rembedded.c -o Rembedded.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dynload.c -o dynload.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c system.c -o system.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c sys-unix.c -o sys-unix.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c sys-std.c -o sys-std.o
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c X11.c -o X11.o
rm -rf libunix.a
ar cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o
ranlib libunix.a
make[4]: Leaving directory `/«PKGBUILDDIR»/src/unix'
make[4]: Entering directory `/«PKGBUILDDIR»/src/unix'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -DR_HOME='"/«PKGBUILDDIR»"' -o Rscript \
	  ./Rscript.c
make[4]: Leaving directory `/«PKGBUILDDIR»/src/unix'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/unix'
make[3]: Entering directory `/«PKGBUILDDIR»/src/main'
config.status: creating src/main/Makefile
make[3]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[3]: Entering directory `/«PKGBUILDDIR»/src/main'
make[4]: Entering directory `/«PKGBUILDDIR»/src/main'
making CommandLineArgs.d from CommandLineArgs.c
making Rdynload.d from Rdynload.c
making Renviron.d from Renviron.c
making RNG.d from RNG.c
making agrep.d from agrep.c
making apply.d from apply.c
making arithmetic.d from arithmetic.c
making array.d from array.c
making attrib.d from attrib.c
making bind.d from bind.c
making builtin.d from builtin.c
making character.d from character.c
making coerce.d from coerce.c
making colors.d from colors.c
making complex.d from complex.c
making connections.d from connections.c
making context.d from context.c
making cum.d from cum.c
making dcf.d from dcf.c
making datetime.d from datetime.c
making debug.d from debug.c
making deparse.d from deparse.c
making devices.d from devices.c
making dotcode.d from dotcode.c
making dounzip.d from dounzip.c
making dstruct.d from dstruct.c
making duplicate.d from duplicate.c
making edit.d from edit.c
making engine.d from engine.c
making envir.d from envir.c
making errors.d from errors.c
making eval.d from eval.c
making format.d from format.c
making gevents.d from gevents.c
making gram.d from gram.c
making gram-ex.d from gram-ex.c
making graphics.d from graphics.c
making grep.d from grep.c
making identical.d from identical.c
making inlined.d from inlined.c
making inspect.d from inspect.c
making internet.d from internet.c
making iosupport.d from iosupport.c
making lapack.d from lapack.c
making list.d from list.c
making localecharset.d from localecharset.c
making logic.d from logic.c
making main.d from main.c
making mapply.d from mapply.c
making match.d from match.c
making memory.d from memory.c
making names.d from names.c
making objects.d from objects.c
making options.d from options.c
making paste.d from paste.c
making platform.d from platform.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making plotmath.d from plotmath.c
making print.d from print.c
making printarray.d from printarray.c
making printvector.d from printvector.c
making printutils.d from printutils.c
making qsort.d from qsort.c
making random.d from random.c
making raw.d from raw.c
making registration.d from registration.c
making relop.d from relop.c
making rlocale.d from rlocale.c
making saveload.d from saveload.c
making scan.d from scan.c
making seq.d from seq.c
making serialize.d from serialize.c
making sort.d from sort.c
making source.d from source.c
making split.d from split.c
making sprintf.d from sprintf.c
making startup.d from startup.c
making subassign.d from subassign.c
making subscript.d from subscript.c
making subset.d from subset.c
making summary.d from summary.c
making sysutils.d from sysutils.c
making unique.d from unique.c
making util.d from util.c
making version.d from version.c
making vfonts.d from vfonts.c
making Rmain.d from Rmain.c
making alloca.d from alloca.c
making mkdtemp.d from mkdtemp.c
making strdup.d from strdup.c
making strncasecmp.d from strncasecmp.c
make[4]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[4]: Entering directory `/«PKGBUILDDIR»/src/main'
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c CommandLineArgs.c -o CommandLineArgs.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c Rdynload.c -o Rdynload.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c Renviron.c -o Renviron.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c RNG.c -o RNG.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c agrep.c -o agrep.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c apply.c -o apply.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c arithmetic.c -o arithmetic.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c array.c -o array.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c attrib.c -o attrib.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c bind.c -o bind.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c builtin.c -o builtin.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c character.c -o character.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c coerce.c -o coerce.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c colors.c -o colors.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c complex.c -o complex.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c connections.c -o connections.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c context.c -o context.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c cum.c -o cum.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dcf.c -o dcf.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c datetime.c -o datetime.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c debug.c -o debug.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c deparse.c -o deparse.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c devices.c -o devices.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dotcode.c -o dotcode.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dounzip.c -o dounzip.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dstruct.c -o dstruct.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c duplicate.c -o duplicate.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c edit.c -o edit.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c engine.c -o engine.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c envir.c -o envir.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c errors.c -o errors.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c eval.c -o eval.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c format.c -o format.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c gevents.c -o gevents.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c gram.c -o gram.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c gram-ex.c -o gram-ex.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c graphics.c -o graphics.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c grep.c -o grep.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c identical.c -o identical.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c inlined.c -o inlined.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c inspect.c -o inspect.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c internet.c -o internet.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c iosupport.c -o iosupport.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c lapack.c -o lapack.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c list.c -o list.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c localecharset.c -o localecharset.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c logic.c -o logic.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c main.c -o main.o
main.c: In function 'dummy_ii':
main.c:1546:5: warning: function returns address of local variable [-Wreturn-local-addr]
     return (uintptr_t) ⅈ
     ^
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c mapply.c -o mapply.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c match.c -o match.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c memory.c -o memory.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c names.c -o names.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c objects.c -o objects.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c options.c -o options.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c paste.c -o paste.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c platform.c -o platform.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c plot.c -o plot.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c plot3d.c -o plot3d.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c plotmath.c -o plotmath.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c print.c -o print.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c printarray.c -o printarray.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c printvector.c -o printvector.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c printutils.c -o printutils.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c qsort.c -o qsort.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c random.c -o random.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c raw.c -o raw.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c registration.c -o registration.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c relop.c -o relop.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rlocale.c -o rlocale.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c saveload.c -o saveload.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c scan.c -o scan.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c seq.c -o seq.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c serialize.c -o serialize.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c sort.c -o sort.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c source.c -o source.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c split.c -o split.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c sprintf.c -o sprintf.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c startup.c -o startup.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c subassign.c -o subassign.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c subscript.c -o subscript.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c subset.c -o subset.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c summary.c -o summary.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c sysutils.c -o sysutils.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c unique.c -o unique.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c util.c -o util.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c version.c -o version.o
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c vfonts.c -o vfonts.o
gfortran  -fopenmp -fpic  -O3 -pipe  -g -c xxxpr.f -o xxxpr.o
gcc -std=gnu99 -shared -fopenmp -Wl,-O1  -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o unique.o util.o version.o vfonts.o xxxpr.o   `ls ../unix/*.o ../appl/*.o ../nmath/*.o`    ../extra/tre/libtre.a    -lblas -lgfortran -lm   -lreadline  -lpcre -llzma -lbz2 -lz -lrt -ldl -lm  
make[5]: Entering directory `/«PKGBUILDDIR»/src/main'
mkdir -p -- /«PKGBUILDDIR»/bin/exec
mkdir -p -- /«PKGBUILDDIR»/lib
make[5]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[4]: Entering directory `/«PKGBUILDDIR»/src/main'
gcc -std=gnu99    -I../../src/extra   -I. -I../../src/include -I../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c Rmain.c -o Rmain.o
gcc -std=gnu99 -Wl,--export-dynamic -fopenmp  -Wl,-O1 -o R.bin Rmain.o  -L../../lib -lR 
make[5]: Entering directory `/«PKGBUILDDIR»/src/main'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[3]: Entering directory `/«PKGBUILDDIR»/src/modules'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/internet'
making Rhttpd.d from Rhttpd.c
making Rsock.d from Rsock.c
making internet.d from internet.c
making nanoftp.d from nanoftp.c
making nanohttp.d from nanohttp.c
making sock.d from sock.c
making sockconn.d from sockconn.c
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/internet'
make[5]: `Makedeps' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/internet'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/internet'
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c Rsock.c -o Rsock.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c internet.c -o internet.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c nanoftp.c -o nanoftp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c nanohttp.c -o nanohttp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c sock.c -o sock.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -fvisibility=hidden -c sockconn.c -o sockconn.o
gcc -std=gnu99 -shared -Wl,-O1 -o internet.so Rhttpd.o Rsock.o internet.o nanoftp.o nanohttp.o sock.o sockconn.o -L../../../lib -lR 
make[6]: Entering directory `/«PKGBUILDDIR»/src/modules/internet'
mkdir -p -- /«PKGBUILDDIR»/modules
make[6]: Leaving directory `/«PKGBUILDDIR»/src/modules/internet'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/internet'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/internet'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/lapack'
making Lapack.d from Lapack.c
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/lapack'
make[5]: `Makedeps' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/lapack'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/lapack'
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c Lapack.c -o Lapack.o
gcc -std=gnu99 -shared -Wl,-O1 -o lapack.so  Lapack.o  -L../../../lib -lR  -llapack -lblas -lgfortran -lm
make[6]: Entering directory `/«PKGBUILDDIR»/src/modules/lapack'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/modules/lapack'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/lapack'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/lapack'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/vfonts'
making g_alab_her.d from g_alab_her.c
making g_cntrlify.d from g_cntrlify.c
making g_fontdb.d from g_fontdb.c
making g_her_glyph.d from g_her_glyph.c
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[5]: `Makedeps' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/vfonts'
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c g_alab_her.c -o g_alab_her.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c g_cntrlify.c -o g_cntrlify.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c g_fontdb.c -o g_fontdb.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c g_her_glyph.c -o g_her_glyph.o
gcc -std=gnu99 -shared -Wl,-O1 -o vfonts.so g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o -L../../../lib -lR -lm 
make[6]: Entering directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
making devX11.d from devX11.c
making rotated.d from rotated.c
making rbitmap.d from rbitmap.c
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: `Makedeps' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/libdrm -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c devX11.c -o devX11.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/libdrm -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rotated.c -o rotated.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/libdrm -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c rbitmap.c -o rbitmap.o
gcc -std=gnu99 -shared -Wl,-O1 -o R_X11.so devX11.o rotated.o rbitmap.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng12 -lz -lcairo -lX11 -lXext   -lX11 -lXt  -ltiff -ljpeg -lpng -lz -L../../../lib -lR -lm 
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include  -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/libdrm -I../../../src/library/grDevices/src/cairo  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c dataentry.c -o dataentry.o
gcc -std=gnu99 -shared -Wl,-O1 -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng12 -lz -lcairo -lX11 -lXext   -lX11 -lXt  -L../../../lib -lR -lm 
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/modules'
make[3]: Entering directory `/«PKGBUILDDIR»/src/library'
mkdir -p -- ../../library
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/profile'
building system startup profile
mkdir -p -- ../../../library/base/R
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/profile'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/translations'
building package 'translations'
mkdir -p -- ../../../library/translations
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/translations'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/translations'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/translations'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/base'
building package 'base'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/base'
mkdir -p -- ../../../library/base/demo
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/base'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/base'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/tools'
building package 'tools'
mkdir -p -- ../../../library/tools
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/tools'
mkdir -p -- ../../../library/tools/R
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/tools'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/tools'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/tools/src'
making text.d from text.c
making init.d from init.c
making Rmd5.d from Rmd5.c
making md5.d from md5.c
making signals.d from signals.c
making install.d from install.c
making getfmts.d from getfmts.c
making http.d from http.c
making gramLatex.d from gramLatex.c
making gramRd.d from gramRd.c
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c text.c -o text.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c init.c -o init.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c Rmd5.c -o Rmd5.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c md5.c -o md5.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c signals.c -o signals.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c install.c -o install.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c getfmts.c -o getfmts.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c http.c -o http.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c gramLatex.c -o gramLatex.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c gramRd.c -o gramRd.o
gcc -std=gnu99 -shared -Wl,-O1 -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o -L../../../../lib -lR
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/tools/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/tools/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/tools/src'
mkdir -p -- ../../../../library/tools/libs
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/tools/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/tools/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/tools'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/tools'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/compiler'
building package 'compiler'
mkdir -p -- ../../../library/compiler
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/compiler'
mkdir -p -- ../../../library/compiler/R
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/compiler'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/compiler'
byte-compiling package 'compiler'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/compiler'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/compiler'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/base'
byte-compiling package 'base'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/base'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/tools'
byte-compiling package 'tools'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/tools'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
building package 'utils'
mkdir -p -- ../../../library/utils
mkdir -p -- ../../../library/utils/doc
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
mkdir -p -- ../../../library/utils/R
mkdir -p -- ../../../library/utils/Sweave
mkdir -p -- ../../../library/utils/misc
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/utils'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/utils/src'
making init.d from init.c
making io.d from io.c
making size.d from size.c
making sock.d from sock.c
making stubs.d from stubs.c
making utils.d from utils.c
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main     -fvisibility=hidden -fpic  -O3 -pipe  -g -c init.c -o init.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main     -fvisibility=hidden -fpic  -O3 -pipe  -g -c io.c -o io.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main     -fvisibility=hidden -fpic  -O3 -pipe  -g -c size.c -o size.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main     -fvisibility=hidden -fpic  -O3 -pipe  -g -c sock.c -o sock.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main     -fvisibility=hidden -fpic  -O3 -pipe  -g -c stubs.c -o stubs.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main     -fvisibility=hidden -fpic  -O3 -pipe  -g -c utils.c -o utils.o
gcc -std=gnu99 -shared -Wl,-O1 -o utils.so init.o io.o size.o sock.o stubs.o utils.o -L../../../../lib -lR
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/utils/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/utils/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/utils/src'
mkdir -p -- ../../../../library/utils/libs
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/utils/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/utils/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/utils'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
byte-compiling package 'utils'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/utils'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/utils'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices'
building package 'grDevices'
mkdir -p -- ../../../library/grDevices
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices'
mkdir -p -- ../../../library/grDevices/R
mkdir -p -- ../../../library/grDevices/afm
mkdir -p -- ../../../library/grDevices/enc
mkdir -p -- ../../../library/grDevices/icc
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src'
making axis_scales.d from axis_scales.c
making chull.d from chull.c
making devices.d from devices.c
making init.d from init.c
making stubs.d from stubs.c
making colors.d from colors.c
making devCairo.d from devCairo.c
making devPicTeX.d from devPicTeX.c
making devPS.d from devPS.c
making devQuartz.d from devQuartz.c
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H      -fpic  -O3 -pipe  -g -c axis_scales.c -o axis_scales.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H      -fpic  -O3 -pipe  -g -c chull.c -o chull.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H      -fpic  -O3 -pipe  -g -c devices.c -o devices.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H      -fpic  -O3 -pipe  -g -c init.c -o init.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H      -fpic  -O3 -pipe  -g -c stubs.c -o stubs.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H      -fpic  -O3 -pipe  -g -c colors.c -o colors.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H      -fpic  -O3 -pipe  -g -c devCairo.c -o devCairo.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H      -fpic  -O3 -pipe  -g -c devPicTeX.c -o devPicTeX.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H      -fpic  -O3 -pipe  -g -c devPS.c -o devPS.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H      -fpic  -O3 -pipe  -g -c devQuartz.c -o devQuartz.o
gcc -std=gnu99 -shared -Wl,-O1 -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src'
mkdir -p -- ../../../../library/grDevices/libs
make[8]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
making cairoBM.d from cairoBM.c
make[9]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[9]: `Makedeps' is up to date.
make[9]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[9]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[10]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
gcc -std=gnu99 -I. -I../../../../../src/include -I../../../../../src/include -pthread -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/libdrm -I../../../../../src/modules/X11  -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -c cairoBM.c -o cairoBM.o
gcc -std=gnu99 -shared -Wl,-O1 -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng12 -lz -lcairo   -ltiff -ljpeg -lpng -lz -L../../../../../lib -lR -lm 
make[10]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[9]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[8]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices'
byte-compiling package 'grDevices'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/graphics'
building package 'graphics'
mkdir -p -- ../../../library/graphics
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/graphics'
mkdir -p -- ../../../library/graphics/R
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/graphics'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/graphics/src'
making init.d from init.c
making base.d from base.c
making graphics.d from graphics.c
making par.d from par.c
making plot.d from plot.c
making plot3d.d from plot3d.c
making stem.d from stem.c
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c init.c -o init.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c base.c -o base.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c graphics.c -o graphics.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c par.c -o par.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c plot.c -o plot.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c plot3d.c -o plot3d.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main    -fvisibility=hidden -fpic  -O3 -pipe  -g -c stem.c -o stem.o
gcc -std=gnu99 -shared -Wl,-O1 -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/graphics/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/graphics/src'
mkdir -p -- ../../../../library/graphics/libs
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/graphics'
byte-compiling package 'graphics'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/stats'
building package 'stats'
mkdir -p -- ../../../library/stats
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats'
mkdir -p -- ../../../library/stats/R
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/stats/src'
making init.d from init.c
making kmeans.d from kmeans.c
making ansari.d from ansari.c
making bandwidths.d from bandwidths.c
making chisqsim.d from chisqsim.c
making d2x2xk.d from d2x2xk.c
making fexact.d from fexact.c
making kendall.d from kendall.c
making ks.d from ks.c
making line.d from line.c
making smooth.d from smooth.c
making prho.d from prho.c
making swilk.d from swilk.c
making ksmooth.d from ksmooth.c
making loessc.d from loessc.c
making monoSpl.d from monoSpl.c
making isoreg.d from isoreg.c
making Srunmed.d from Srunmed.c
making dblcen.d from dblcen.c
making distance.d from distance.c
making hclust-utils.d from hclust-utils.c
making nls.d from nls.c
making rWishart.d from rWishart.c
making HoltWinters.d from HoltWinters.c
making PPsum.d from PPsum.c
making arima.d from arima.c
making burg.d from burg.c
making filter.d from filter.c
making mAR.d from mAR.c
making pacf.d from pacf.c
making starma.d from starma.c
making port.d from port.c
making family.d from family.c
making sbart.d from sbart.c
making approx.d from approx.c
making loglin.d from loglin.c
making lowess.d from lowess.c
making massdist.d from massdist.c
making splines.d from splines.c
making lm.d from lm.c
making complete_cases.d from complete_cases.c
making cov.d from cov.c
making deriv.d from deriv.c
making fft.d from fft.c
making fourier.d from fourier.c
making model.d from model.c
making optim.d from optim.c
making optimize.d from optimize.c
making integrate.d from integrate.c
making random.d from random.c
making distn.d from distn.c
making zeroin.d from zeroin.c
making rcont.d from rcont.c
making influence.d from influence.c
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c init.c -o init.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c kmeans.c -o kmeans.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c ansari.c -o ansari.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c bandwidths.c -o bandwidths.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c chisqsim.c -o chisqsim.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c d2x2xk.c -o d2x2xk.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c fexact.c -o fexact.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c kendall.c -o kendall.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c ks.c -o ks.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c line.c -o line.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c smooth.c -o smooth.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c prho.c -o prho.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c swilk.c -o swilk.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c ksmooth.c -o ksmooth.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c loessc.c -o loessc.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c monoSpl.c -o monoSpl.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c isoreg.c -o isoreg.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c Srunmed.c -o Srunmed.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c dblcen.c -o dblcen.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c distance.c -o distance.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c hclust-utils.c -o hclust-utils.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c nls.c -o nls.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c rWishart.c -o rWishart.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c HoltWinters.c -o HoltWinters.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c PPsum.c -o PPsum.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c arima.c -o arima.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c burg.c -o burg.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c filter.c -o filter.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c mAR.c -o mAR.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c pacf.c -o pacf.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c starma.c -o starma.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c port.c -o port.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c family.c -o family.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c sbart.c -o sbart.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c approx.c -o approx.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c loglin.c -o loglin.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c lowess.c -o lowess.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c massdist.c -o massdist.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c splines.c -o splines.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c lm.c -o lm.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c complete_cases.c -o complete_cases.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c cov.c -o cov.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c deriv.c -o deriv.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c fft.c -o fft.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c fourier.c -o fourier.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c model.c -o model.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c optim.c -o optim.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c optimize.c -o optimize.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c integrate.c -o integrate.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c random.c -o random.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c distn.c -o distn.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c zeroin.c -o zeroin.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c rcont.c -o rcont.o
gcc -std=gnu99 -I -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fopenmp -fvisibility=hidden -fpic  -O3 -pipe  -g -c influence.c -o influence.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c bsplvd.f -o bsplvd.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c bvalue.f -o bvalue.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c bvalus.f -o bvalus.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c loessf.f -o loessf.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c ppr.f -o ppr.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c qsbart.f -o qsbart.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c sgram.f -o sgram.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c sinerp.f -o sinerp.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c sslvrg.f -o sslvrg.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c stxwx.f -o stxwx.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c hclust.f -o hclust.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c kmns.f -o kmns.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c eureka.f -o eureka.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c stl.f -o stl.o
gfortran -fpic  -O3 -pipe  -g -ffloat-store -c portsrc.f -o portsrc.o
gfortran  -fvisibility=hidden -fpic  -O3 -pipe  -g -c lminfl.f -o lminfl.o
gcc -std=gnu99 -shared -Wl,-O1 -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -llapack -lblas -lgfortran -lm -L../../../../lib -lR
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/stats/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/stats/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/stats/src'
mkdir -p -- ../../../../library/stats/libs
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/stats/src'
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make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats'
byte-compiling package 'stats'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/stats'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/datasets'
building package 'datasets'
mkdir -p -- ../../../library/datasets
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/datasets'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/datasets'
mkdir -p -- ../../../library/datasets/data
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'AirPassengers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'AirPassengers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'BJsales' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'BJsales' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'BOD' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'BOD' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'CO2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'CO2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ChickWeight' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'ChickWeight' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'DNase' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'DNase' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'EuStockMarkets' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'EuStockMarkets' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Formaldehyde' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Formaldehyde' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'HairEyeColor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'HairEyeColor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Harman23.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Harman23.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Harman74.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Harman74.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Indometh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Indometh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'InsectSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'InsectSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'JohnsonJohnson' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'JohnsonJohnson' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'LakeHuron' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'LakeHuron' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'LifeCycleSavings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'LifeCycleSavings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Loblolly' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Loblolly' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Nile' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Nile' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Orange' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Orange' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'OrchardSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'OrchardSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'PlantGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'PlantGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Puromycin' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Puromycin' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Seatbelts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Seatbelts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Theoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Theoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Titanic' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Titanic' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ToothGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'ToothGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UCBAdmissions' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UCBAdmissions' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKDriverDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UKDriverDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKLungDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UKLungDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKgas' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UKgas' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USAccDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USAccDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USArrests' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USArrests' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USJudgeRatings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USJudgeRatings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USPersonalExpenditure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USPersonalExpenditure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'VADeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'VADeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'WWWusage' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'WWWusage' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'WorldPhones' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'WorldPhones' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ability.cov' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'ability.cov' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'airmiles' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'airmiles' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'airquality' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'airquality' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'anscombe' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'anscombe' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'attenu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'attenu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'attitude' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'attitude' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'austres' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'austres' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'beavers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'beavers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'cars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'cars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'chickwts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'chickwts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'co2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'co2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'crimtab' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'crimtab' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'discoveries' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'discoveries' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'esoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'esoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'euro' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'euro' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'eurodist' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'eurodist' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'faithful' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'faithful' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'freeny' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'freeny' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'infert' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'infert' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'iris' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'iris' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'iris3' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'iris3' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'islands' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'islands' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'lh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'lh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'longley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'longley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'lynx' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'lynx' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'morley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'morley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'mtcars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'mtcars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'nhtemp' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'nhtemp' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'nottem' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'nottem' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'npk' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'npk' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'occupationalStatus' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'occupationalStatus' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'precip' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'precip' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'presidents' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'presidents' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'pressure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'pressure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'quakes' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'quakes' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'randu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'randu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'rivers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'rivers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'rock' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'rock' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sleep' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sleep' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'stackloss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'stackloss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'state' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'state' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspot.month' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sunspot.month' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspot.year' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sunspot.year' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspots' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sunspots' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'swiss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'swiss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'treering' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'treering' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'trees' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'trees' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'uspop' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'uspop' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'volcano' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'volcano' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'warpbreaks' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'warpbreaks' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'women' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'women' not found
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/datasets'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/methods'
building package 'methods'
mkdir -p -- ../../../library/methods
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/methods'
mkdir -p -- ../../../library/methods/R
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/methods'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/methods'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/methods/src'
making do_substitute_direct.d from do_substitute_direct.c
making init.d from init.c
making methods_list_dispatch.d from methods_list_dispatch.c
making slot.d from slot.c
making class_support.d from class_support.c
making tests.d from tests.c
making utils.d from utils.c
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O3 -pipe  -g -c do_substitute_direct.c -o do_substitute_direct.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O3 -pipe  -g -c init.c -o init.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O3 -pipe  -g -c methods_list_dispatch.c -o methods_list_dispatch.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O3 -pipe  -g -c slot.c -o slot.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O3 -pipe  -g -c class_support.c -o class_support.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O3 -pipe  -g -c tests.c -o tests.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O3 -pipe  -g -c utils.c -o utils.o
gcc -std=gnu99 -shared -Wl,-O1 -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/methods/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/methods/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/methods/src'
mkdir -p -- ../../../../library/methods/libs
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/methods/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/methods/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/methods'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/methods'
byte-compiling 'methods'
initializing class and method definitions ... done
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/methods'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/methods'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/grid'
building package 'grid'
mkdir -p -- ../../../library/grid
mkdir -p -- ../../../library/grid/doc
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grid'
mkdir -p -- ../../../library/grid/R
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grid'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grid'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/grid/src'
making gpar.d from gpar.c
making grid.d from grid.c
making just.d from just.c
making layout.d from layout.c
making matrix.d from matrix.c
making register.d from register.c
making state.d from state.c
making unit.d from unit.c
making util.d from util.c
making viewport.d from viewport.c
gcc -std=gnu99 -I../../../../include -DNDEBUG     -fvisibility=hidden -fpic  -O3 -pipe  -g -c gpar.c -o gpar.o
gcc -std=gnu99 -I../../../../include -DNDEBUG     -fvisibility=hidden -fpic  -O3 -pipe  -g -c grid.c -o grid.o
gcc -std=gnu99 -I../../../../include -DNDEBUG     -fvisibility=hidden -fpic  -O3 -pipe  -g -c just.c -o just.o
gcc -std=gnu99 -I../../../../include -DNDEBUG     -fvisibility=hidden -fpic  -O3 -pipe  -g -c layout.c -o layout.o
gcc -std=gnu99 -I../../../../include -DNDEBUG     -fvisibility=hidden -fpic  -O3 -pipe  -g -c matrix.c -o matrix.o
gcc -std=gnu99 -I../../../../include -DNDEBUG     -fvisibility=hidden -fpic  -O3 -pipe  -g -c register.c -o register.o
gcc -std=gnu99 -I../../../../include -DNDEBUG     -fvisibility=hidden -fpic  -O3 -pipe  -g -c state.c -o state.o
gcc -std=gnu99 -I../../../../include -DNDEBUG     -fvisibility=hidden -fpic  -O3 -pipe  -g -c unit.c -o unit.o
gcc -std=gnu99 -I../../../../include -DNDEBUG     -fvisibility=hidden -fpic  -O3 -pipe  -g -c util.c -o util.o
gcc -std=gnu99 -I../../../../include -DNDEBUG     -fvisibility=hidden -fpic  -O3 -pipe  -g -c viewport.c -o viewport.o
gcc -std=gnu99 -shared -Wl,-O1 -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o -L../../../../lib -lR
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/grid/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/grid/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/grid/src'
mkdir -p -- ../../../../library/grid/libs
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/grid/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/grid/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grid'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grid'
byte-compiling package 'grid'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grid'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/grid'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/splines'
building package 'splines'
mkdir -p -- ../../../library/splines
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/splines'
mkdir -p -- ../../../library/splines/R
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/splines'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/splines'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/splines/src'
making splines.d from splines.c
gcc -std=gnu99 -I../../../../include -DNDEBUG      -fpic  -O3 -pipe  -g -c splines.c -o splines.o
gcc -std=gnu99 -shared -Wl,-O1 -o splines.so splines.o -L../../../../lib -lR
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/splines/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/splines/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/splines/src'
mkdir -p -- ../../../../library/splines/libs
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/splines/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/splines/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/splines'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/splines'
byte-compiling package 'splines'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/splines'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/splines'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/stats4'
building package 'stats4'
mkdir -p -- ../../../library/stats4
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats4'
mkdir -p -- ../../../library/stats4/R
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats4'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats4'
byte-compiling package 'stats4'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats4'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/stats4'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk'
building package 'tcltk'
mkdir -p -- ../../../library/tcltk/R
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk'
mkdir -p -- ../../../library/tcltk/exec
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk/src'
making init.d from init.c
making tcltk.d from tcltk.c
making tcltk_unix.d from tcltk_unix.c
gcc -std=gnu99 -I../../../../include -DNDEBUG -I/usr/include/tcl8.5 -I/usr/include/tcl8.5      -fpic  -O3 -pipe  -g -c init.c -o init.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I/usr/include/tcl8.5 -I/usr/include/tcl8.5      -fpic  -O3 -pipe  -g -c tcltk.c -o tcltk.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I/usr/include/tcl8.5 -I/usr/include/tcl8.5      -fpic  -O3 -pipe  -g -c tcltk_unix.c -o tcltk_unix.o
gcc -std=gnu99 -shared -Wl,-O1 -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib -ltcl8.5 -L/usr/lib -ltk8.5 -lX11 -lXss -lXext -lm -L../../../../lib -lR
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk/src'
make[6]: `Makedeps' is up to date.
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk/src'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk/src'
mkdir -p -- ../../../../library/tcltk/libs
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk/src'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk'
byte-compiling package 'tcltk'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/parallel'
building package 'parallel'
mkdir -p -- ../../../library/parallel
mkdir -p -- ../../../library/parallel/doc
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/parallel'
mkdir -p -- ../../../library/parallel/R
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/parallel'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/parallel/src'
making init.d from init.c
making rngstream.d from rngstream.c
making fork.d from fork.c
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O3 -pipe  -g -c init.c -o init.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O3 -pipe  -g -c rngstream.c -o rngstream.o
gcc -std=gnu99 -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H    -fvisibility=hidden -fpic  -O3 -pipe  -g -c fork.c -o fork.o
gcc -std=gnu99 -shared -Wl,-O1 -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/parallel/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/parallel/src'
mkdir -p -- ../../../../library/parallel/libs
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/parallel'
byte-compiling package 'parallel'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/base'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/base'
installing parsed NAMESPACE files
make[3]: Leaving directory `/«PKGBUILDDIR»/src/library'
make[2]: Leaving directory `/«PKGBUILDDIR»/src'
make[2]: Entering directory `/«PKGBUILDDIR»/tests'
make[2]: Nothing to be done for `R'.
make[2]: Leaving directory `/«PKGBUILDDIR»/tests'
you should 'make docs' now ...
make[1]: Leaving directory `/«PKGBUILDDIR»'
(cd src/nmath/standalone;				\
		/usr/bin/make	CFLAGS="-O3 -pipe  -g -D_REENTRANT"		\
			CXXFLAGS="-O3 -pipe  -g -D_REENTRANT"	\
			FFLAGS="-O3 -pipe  -g -D_REENTRANT"	\
			CC="gcc -std=gnu99"				\
			CXX=g++			\
			F77=gfortran			\
			libRmath_la_LDFLAGS=-Wl,-soname,libRmath.so.1 \
			shared static )
make[1]: Entering directory `/«PKGBUILDDIR»/src/nmath/standalone'
(cd ../../include; /usr/bin/make Rmath.h)
make[2]: Entering directory `/«PKGBUILDDIR»/src/include'
make[2]: `Rmath.h' is up to date.
make[2]: Leaving directory `/«PKGBUILDDIR»/src/include'
Copying source files
make[2]: Entering directory `/«PKGBUILDDIR»/src/nmath/standalone'
making mlutils.d from mlutils.c
making d1mach.d from d1mach.c
making i1mach.d from i1mach.c
making fmax2.d from fmax2.c
making fmin2.d from fmin2.c
making fprec.d from fprec.c
making fround.d from fround.c
making ftrunc.d from ftrunc.c
making sign.d from sign.c
making fsign.d from fsign.c
making imax2.d from imax2.c
making imin2.d from imin2.c
making chebyshev.d from chebyshev.c
making log1p.d from log1p.c
making expm1.d from expm1.c
making lgammacor.d from lgammacor.c
making gammalims.d from gammalims.c
making stirlerr.d from stirlerr.c
making bd0.d from bd0.c
making gamma.d from gamma.c
making lgamma.d from lgamma.c
making gamma_cody.d from gamma_cody.c
making beta.d from beta.c
making lbeta.d from lbeta.c
making polygamma.d from polygamma.c
making bessel_i.d from bessel_i.c
making bessel_j.d from bessel_j.c
making bessel_k.d from bessel_k.c
making bessel_y.d from bessel_y.c
making choose.d from choose.c
making snorm.d from snorm.c
making sexp.d from sexp.c
making dgamma.d from dgamma.c
making pgamma.d from pgamma.c
making qgamma.d from qgamma.c
making rgamma.d from rgamma.c
making dbeta.d from dbeta.c
making pbeta.d from pbeta.c
making qbeta.d from qbeta.c
making rbeta.d from rbeta.c
making dunif.d from dunif.c
making punif.d from punif.c
making qunif.d from qunif.c
making runif.d from runif.c
making dnorm.d from dnorm.c
making pnorm.d from pnorm.c
making qnorm.d from qnorm.c
making rnorm.d from rnorm.c
making dlnorm.d from dlnorm.c
making plnorm.d from plnorm.c
making qlnorm.d from qlnorm.c
making rlnorm.d from rlnorm.c
making df.d from df.c
making pf.d from pf.c
making qf.d from qf.c
making rf.d from rf.c
making dnf.d from dnf.c
making dt.d from dt.c
making pt.d from pt.c
making qt.d from qt.c
making rt.d from rt.c
making dnt.d from dnt.c
making dchisq.d from dchisq.c
making pchisq.d from pchisq.c
making qchisq.d from qchisq.c
making rchisq.d from rchisq.c
making rnchisq.d from rnchisq.c
making dbinom.d from dbinom.c
making pbinom.d from pbinom.c
making qbinom.d from qbinom.c
making rbinom.d from rbinom.c
making rmultinom.d from rmultinom.c
making dcauchy.d from dcauchy.c
making pcauchy.d from pcauchy.c
making qcauchy.d from qcauchy.c
making rcauchy.d from rcauchy.c
making dexp.d from dexp.c
making pexp.d from pexp.c
making qexp.d from qexp.c
making rexp.d from rexp.c
making dgeom.d from dgeom.c
making pgeom.d from pgeom.c
making qgeom.d from qgeom.c
making rgeom.d from rgeom.c
making dhyper.d from dhyper.c
making phyper.d from phyper.c
making qhyper.d from qhyper.c
making rhyper.d from rhyper.c
making dnbinom.d from dnbinom.c
making pnbinom.d from pnbinom.c
making qnbinom.d from qnbinom.c
making rnbinom.d from rnbinom.c
making dpois.d from dpois.c
making ppois.d from ppois.c
making qpois.d from qpois.c
making rpois.d from rpois.c
making dweibull.d from dweibull.c
making pweibull.d from pweibull.c
making qweibull.d from qweibull.c
making rweibull.d from rweibull.c
making dlogis.d from dlogis.c
making plogis.d from plogis.c
making qlogis.d from qlogis.c
making rlogis.d from rlogis.c
making dnchisq.d from dnchisq.c
making pnchisq.d from pnchisq.c
making qnchisq.d from qnchisq.c
making dnbeta.d from dnbeta.c
making pnbeta.d from pnbeta.c
making qnbeta.d from qnbeta.c
making pnf.d from pnf.c
making pnt.d from pnt.c
making qnf.d from qnf.c
making qnt.d from qnt.c
making ptukey.d from ptukey.c
making qtukey.d from qtukey.c
making toms708.d from toms708.c
making wilcox.d from wilcox.c
making signrank.d from signrank.c
making std_unif.d from std_unif.c
make[2]: Leaving directory `/«PKGBUILDDIR»/src/nmath/standalone'
make[2]: Entering directory `/«PKGBUILDDIR»/src/nmath/standalone'
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c mlutils.c -o mlutils.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c d1mach.c -o d1mach.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c i1mach.c -o i1mach.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c fmax2.c -o fmax2.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c fmin2.c -o fmin2.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c fprec.c -o fprec.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c fround.c -o fround.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c ftrunc.c -o ftrunc.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c sign.c -o sign.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c fsign.c -o fsign.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c imax2.c -o imax2.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c imin2.c -o imin2.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c chebyshev.c -o chebyshev.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c log1p.c -o log1p.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c expm1.c -o expm1.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c lgammacor.c -o lgammacor.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c gammalims.c -o gammalims.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c stirlerr.c -o stirlerr.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c bd0.c -o bd0.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c gamma.c -o gamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c lgamma.c -o lgamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c gamma_cody.c -o gamma_cody.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c beta.c -o beta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c lbeta.c -o lbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c polygamma.c -o polygamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c bessel_i.c -o bessel_i.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c bessel_j.c -o bessel_j.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c bessel_k.c -o bessel_k.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c bessel_y.c -o bessel_y.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c choose.c -o choose.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c snorm.c -o snorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c sexp.c -o sexp.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dgamma.c -o dgamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pgamma.c -o pgamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qgamma.c -o qgamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rgamma.c -o rgamma.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dbeta.c -o dbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pbeta.c -o pbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qbeta.c -o qbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rbeta.c -o rbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dunif.c -o dunif.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c punif.c -o punif.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qunif.c -o qunif.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c runif.c -o runif.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dnorm.c -o dnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pnorm.c -o pnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qnorm.c -o qnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rnorm.c -o rnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dlnorm.c -o dlnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c plnorm.c -o plnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qlnorm.c -o qlnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rlnorm.c -o rlnorm.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c df.c -o df.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pf.c -o pf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qf.c -o qf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rf.c -o rf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dnf.c -o dnf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dt.c -o dt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pt.c -o pt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qt.c -o qt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rt.c -o rt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dnt.c -o dnt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dchisq.c -o dchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pchisq.c -o pchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qchisq.c -o qchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rchisq.c -o rchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rnchisq.c -o rnchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dbinom.c -o dbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pbinom.c -o pbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qbinom.c -o qbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rbinom.c -o rbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rmultinom.c -o rmultinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dcauchy.c -o dcauchy.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pcauchy.c -o pcauchy.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qcauchy.c -o qcauchy.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rcauchy.c -o rcauchy.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dexp.c -o dexp.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pexp.c -o pexp.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qexp.c -o qexp.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rexp.c -o rexp.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dgeom.c -o dgeom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pgeom.c -o pgeom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qgeom.c -o qgeom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rgeom.c -o rgeom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dhyper.c -o dhyper.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c phyper.c -o phyper.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qhyper.c -o qhyper.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rhyper.c -o rhyper.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dnbinom.c -o dnbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pnbinom.c -o pnbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qnbinom.c -o qnbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rnbinom.c -o rnbinom.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dpois.c -o dpois.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c ppois.c -o ppois.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qpois.c -o qpois.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rpois.c -o rpois.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dweibull.c -o dweibull.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pweibull.c -o pweibull.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qweibull.c -o qweibull.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rweibull.c -o rweibull.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dlogis.c -o dlogis.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c plogis.c -o plogis.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qlogis.c -o qlogis.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c rlogis.c -o rlogis.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dnchisq.c -o dnchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pnchisq.c -o pnchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qnchisq.c -o qnchisq.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c dnbeta.c -o dnbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pnbeta.c -o pnbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qnbeta.c -o qnbeta.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pnf.c -o pnf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c pnt.c -o pnt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qnf.c -o qnf.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qnt.c -o qnt.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c ptukey.c -o ptukey.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c qtukey.c -o qtukey.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c toms708.c -o toms708.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c wilcox.c -o wilcox.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c signrank.c -o signrank.lo
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -c std_unif.c -o std_unif.lo
gcc -std=gnu99 -shared -fopenmp  -o libRmath.so -Wl,-soname,libRmath.so.1 mlutils.lo d1mach.lo i1mach.lo fmax2.lo fmin2.lo fprec.lo fround.lo ftrunc.lo sign.lo fsign.lo imax2.lo imin2.lo chebyshev.lo log1p.lo expm1.lo lgammacor.lo gammalims.lo stirlerr.lo bd0.lo gamma.lo lgamma.lo gamma_cody.lo beta.lo lbeta.lo polygamma.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_y.lo choose.lo snorm.lo sexp.lo dgamma.lo pgamma.lo qgamma.lo rgamma.lo dbeta.lo pbeta.lo qbeta.lo rbeta.lo dunif.lo punif.lo qunif.lo runif.lo dnorm.lo pnorm.lo qnorm.lo rnorm.lo dlnorm.lo plnorm.lo qlnorm.lo rlnorm.lo df.lo pf.lo qf.lo rf.lo dnf.lo dt.lo pt.lo qt.lo rt.lo dnt.lo dchisq.lo pchisq.lo qchisq.lo rchisq.lo rnchisq.lo dbinom.lo pbinom.lo qbinom.lo rbinom.lo rmultinom.lo dcauchy.lo pcauchy.lo qcauchy.lo rcauchy.lo dexp.lo pexp.lo qexp.lo rexp.lo dgeom.lo pgeom.lo qgeom.lo rgeom.lo dhyper.lo phyper.lo qhyper.lo rhyper.lo dnbinom.lo pnbinom.lo qnbinom.lo rnbinom.lo dpois.lo ppois.lo qpois.lo rpois.lo dweibull.lo pweibull.lo qweibull.lo rweibull.lo dlogis.lo plogis.lo qlogis.lo rlogis.lo dnchisq.lo pnchisq.lo qnchisq.lo dnbeta.lo pnbeta.lo qnbeta.lo pnf.lo pnt.lo qnf.lo qnt.lo ptukey.lo qtukey.lo toms708.lo wilcox.lo signrank.lo std_unif.lo -lm
make[2]: Leaving directory `/«PKGBUILDDIR»/src/nmath/standalone'
make[2]: Entering directory `/«PKGBUILDDIR»/src/nmath/standalone'
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c mlutils.c -o mlutils.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c d1mach.c -o d1mach.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c i1mach.c -o i1mach.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c fmax2.c -o fmax2.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c fmin2.c -o fmin2.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c fprec.c -o fprec.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c fround.c -o fround.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c ftrunc.c -o ftrunc.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c sign.c -o sign.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c fsign.c -o fsign.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c imax2.c -o imax2.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c imin2.c -o imin2.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c chebyshev.c -o chebyshev.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c log1p.c -o log1p.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c expm1.c -o expm1.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c lgammacor.c -o lgammacor.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c gammalims.c -o gammalims.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c stirlerr.c -o stirlerr.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c bd0.c -o bd0.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c gamma.c -o gamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c lgamma.c -o lgamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c gamma_cody.c -o gamma_cody.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c beta.c -o beta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c lbeta.c -o lbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c polygamma.c -o polygamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c bessel_i.c -o bessel_i.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c bessel_j.c -o bessel_j.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c bessel_k.c -o bessel_k.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c bessel_y.c -o bessel_y.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c choose.c -o choose.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c snorm.c -o snorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c sexp.c -o sexp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dgamma.c -o dgamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pgamma.c -o pgamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qgamma.c -o qgamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rgamma.c -o rgamma.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dbeta.c -o dbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pbeta.c -o pbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qbeta.c -o qbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rbeta.c -o rbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dunif.c -o dunif.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c punif.c -o punif.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qunif.c -o qunif.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c runif.c -o runif.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dnorm.c -o dnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pnorm.c -o pnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qnorm.c -o qnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rnorm.c -o rnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dlnorm.c -o dlnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c plnorm.c -o plnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qlnorm.c -o qlnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rlnorm.c -o rlnorm.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c df.c -o df.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pf.c -o pf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qf.c -o qf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rf.c -o rf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dnf.c -o dnf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dt.c -o dt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pt.c -o pt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qt.c -o qt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rt.c -o rt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dnt.c -o dnt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dchisq.c -o dchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pchisq.c -o pchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qchisq.c -o qchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rchisq.c -o rchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rnchisq.c -o rnchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dbinom.c -o dbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pbinom.c -o pbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qbinom.c -o qbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rbinom.c -o rbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rmultinom.c -o rmultinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dcauchy.c -o dcauchy.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pcauchy.c -o pcauchy.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qcauchy.c -o qcauchy.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rcauchy.c -o rcauchy.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dexp.c -o dexp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pexp.c -o pexp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qexp.c -o qexp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rexp.c -o rexp.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dgeom.c -o dgeom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pgeom.c -o pgeom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qgeom.c -o qgeom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rgeom.c -o rgeom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dhyper.c -o dhyper.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c phyper.c -o phyper.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qhyper.c -o qhyper.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rhyper.c -o rhyper.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dnbinom.c -o dnbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pnbinom.c -o pnbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qnbinom.c -o qnbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rnbinom.c -o rnbinom.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dpois.c -o dpois.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c ppois.c -o ppois.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qpois.c -o qpois.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rpois.c -o rpois.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dweibull.c -o dweibull.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pweibull.c -o pweibull.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qweibull.c -o qweibull.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rweibull.c -o rweibull.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dlogis.c -o dlogis.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c plogis.c -o plogis.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qlogis.c -o qlogis.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c rlogis.c -o rlogis.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dnchisq.c -o dnchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pnchisq.c -o pnchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qnchisq.c -o qnchisq.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c dnbeta.c -o dnbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pnbeta.c -o pnbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qnbeta.c -o qnbeta.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pnf.c -o pnf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c pnt.c -o pnt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qnf.c -o qnf.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qnt.c -o qnt.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c ptukey.c -o ptukey.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c qtukey.c -o qtukey.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c toms708.c -o toms708.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c wilcox.c -o wilcox.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c signrank.c -o signrank.o
gcc -std=gnu99 -I. -I../../../src/include -I../../../src/include -I./..  -DHAVE_CONFIG_H -DMATHLIB_STANDALONE  -fopenmp  -O3 -pipe  -g -D_REENTRANT -c std_unif.c -o std_unif.o
ar cr libRmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o std_unif.o
ranlib libRmath.a
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make[5]: `Makedeps' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/extra/tre'
make[5]: Entering directory `/«PKGBUILDDIR»/src/extra/tre'
make[5]: `libtre.a' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/extra/tre'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/extra/tre'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/extra'
make[3]: Entering directory `/«PKGBUILDDIR»/src/appl'
make[4]: Entering directory `/«PKGBUILDDIR»/src/appl'
make[4]: `Makedeps' is up to date.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/appl'
make[4]: Entering directory `/«PKGBUILDDIR»/src/appl'
make[4]: `libappl.a' is up to date.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/appl'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/appl'
make[3]: Entering directory `/«PKGBUILDDIR»/src/nmath'
make[4]: Entering directory `/«PKGBUILDDIR»/src/nmath'
make[4]: `Makedeps' is up to date.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/nmath'
make[4]: Entering directory `/«PKGBUILDDIR»/src/nmath'
make[4]: `libnmath.a' is up to date.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/nmath'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/nmath'
make[3]: Entering directory `/«PKGBUILDDIR»/src/unix'
make[4]: Entering directory `/«PKGBUILDDIR»/src/unix'
make[4]: `Makedeps' is up to date.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/unix'
make[4]: Entering directory `/«PKGBUILDDIR»/src/unix'
make[4]: `libunix.a' is up to date.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/unix'
make[4]: Entering directory `/«PKGBUILDDIR»/src/unix'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g  -DR_HOME='"/«PKGBUILDDIR»"' -o Rscript \
	  ./Rscript.c
make[4]: Leaving directory `/«PKGBUILDDIR»/src/unix'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/unix'
make[3]: Entering directory `/«PKGBUILDDIR»/src/main'
make[4]: Entering directory `/«PKGBUILDDIR»/src/main'
make[4]: `Makedeps' is up to date.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[4]: Entering directory `/«PKGBUILDDIR»/src/main'
make[5]: Entering directory `/«PKGBUILDDIR»/src/main'
/«PKGBUILDDIR»/lib/libR.so is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[4]: Entering directory `/«PKGBUILDDIR»/src/main'
make[5]: Entering directory `/«PKGBUILDDIR»/src/main'
/«PKGBUILDDIR»/bin/exec/R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[3]: Entering directory `/«PKGBUILDDIR»/src/modules'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/internet'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/internet'
make[5]: `Makedeps' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/internet'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/internet'
make[5]: `internet.so' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/internet'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/internet'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/lapack'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/lapack'
make[5]: `Makedeps' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/lapack'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/lapack'
make[5]: `lapack.so' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/lapack'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/lapack'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[5]: `Makedeps' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[5]: `vfonts.so' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: `Makedeps' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: `R_X11.so' is up to date.
make[5]: `R_de.so' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
/«PKGBUILDDIR»/modules/R_X11.so is unchanged
/«PKGBUILDDIR»/modules/R_de.so is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/modules'
make[3]: Entering directory `/«PKGBUILDDIR»/src/library'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/profile'
building system startup profile
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/profile'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/translations'
building package 'translations'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/translations'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/translations'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/translations'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/base'
building package 'base'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/base'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/base'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/base'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/tools'
building package 'tools'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/tools'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/tools'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/tools'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/tools/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/tools/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/tools/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/tools/src'
../../../../library/tools/libs/tools.so is unchanged
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/tools/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/tools/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/tools'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/tools'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/compiler'
building package 'compiler'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/compiler'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/compiler'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/compiler'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/compiler'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/compiler'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/base'
make[4]: Nothing to be done for `mklazycomp'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/base'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/tools'
make[4]: Nothing to be done for `mklazycomp'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/tools'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
building package 'utils'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
all.R is unchanged
make[5]: Nothing to be done for `iconvlist'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/utils'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/utils/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/utils/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/utils/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/utils/src'
../../../../library/utils/libs/utils.so is unchanged
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/utils/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/utils/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/utils'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/utils'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/utils'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices'
building package 'grDevices'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src'
../../../../library/grDevices/libs/grDevices.so is unchanged
make[8]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[9]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[9]: `Makedeps' is up to date.
make[9]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[9]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[10]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[10]: `cairo.so' is up to date.
make[10]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[9]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[8]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/graphics'
building package 'graphics'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/graphics'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/graphics'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/graphics/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/graphics/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/graphics/src'
../../../../library/graphics/libs/graphics.so is unchanged
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/graphics'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/stats'
building package 'stats'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/stats/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/stats/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/stats/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/stats/src'
../../../../library/stats/libs/stats.so is unchanged
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/stats/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/stats/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/stats'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/datasets'
building package 'datasets'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/datasets'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/datasets'
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'AirPassengers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'AirPassengers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'BJsales' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'BJsales' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'BOD' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'BOD' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'CO2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'CO2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ChickWeight' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'ChickWeight' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'DNase' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'DNase' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'EuStockMarkets' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'EuStockMarkets' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Formaldehyde' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Formaldehyde' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'HairEyeColor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'HairEyeColor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Harman23.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Harman23.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Harman74.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Harman74.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Indometh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Indometh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'InsectSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'InsectSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'JohnsonJohnson' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'JohnsonJohnson' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'LakeHuron' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'LakeHuron' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'LifeCycleSavings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'LifeCycleSavings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Loblolly' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Loblolly' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Nile' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Nile' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Orange' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Orange' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'OrchardSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'OrchardSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'PlantGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'PlantGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Puromycin' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Puromycin' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Seatbelts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Seatbelts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Theoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Theoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Titanic' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Titanic' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ToothGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'ToothGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UCBAdmissions' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UCBAdmissions' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKDriverDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UKDriverDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKLungDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UKLungDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKgas' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UKgas' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USAccDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USAccDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USArrests' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USArrests' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USJudgeRatings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USJudgeRatings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USPersonalExpenditure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USPersonalExpenditure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'VADeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'VADeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'WWWusage' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'WWWusage' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'WorldPhones' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'WorldPhones' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ability.cov' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'ability.cov' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'airmiles' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'airmiles' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'airquality' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'airquality' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'anscombe' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'anscombe' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'attenu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'attenu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'attitude' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'attitude' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'austres' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'austres' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'beavers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'beavers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'cars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'cars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'chickwts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'chickwts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'co2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'co2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'crimtab' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'crimtab' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'discoveries' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'discoveries' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'esoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'esoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'euro' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'euro' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'eurodist' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'eurodist' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'faithful' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'faithful' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'freeny' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'freeny' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'infert' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'infert' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'iris' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'iris' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'iris3' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'iris3' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'islands' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'islands' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'lh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'lh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'longley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'longley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'lynx' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'lynx' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'morley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'morley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'mtcars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'mtcars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'nhtemp' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'nhtemp' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'nottem' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'nottem' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'npk' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'npk' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'occupationalStatus' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'occupationalStatus' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
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Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
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Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
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Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
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Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'pressure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
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Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
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Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
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Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'randu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'randu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'rivers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
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Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'rock' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'rock' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sleep' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sleep' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'stackloss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'stackloss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'state' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'state' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspot.month' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sunspot.month' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspot.year' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sunspot.year' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspots' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sunspots' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'swiss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'swiss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
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Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
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make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/datasets'
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building package 'stats4'
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building package 'parallel'
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installing parsed NAMESPACE files
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you should 'make docs' now ...
make[2]: Entering directory `/«PKGBUILDDIR»/doc'
creating NEWS
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creating doc/manual/R-FAQ.html
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installing parsed Rd
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  base
  stats
  utils
  methods
  graphics
  grDevices
  datasets
  grid
  tools
  tcltk
  splines
  stats4
  compiler
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building/updating package metadata ...
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'AirPassengers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
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  data set 'BOD' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'CO2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ChickWeight' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'DNase' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'EuStockMarkets' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Formaldehyde' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'HairEyeColor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Harman23.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Harman74.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Indometh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'InsectSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'JohnsonJohnson' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'LakeHuron' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'LifeCycleSavings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Loblolly' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Nile' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Orange' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'OrchardSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'PlantGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Puromycin' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Seatbelts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Theoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Titanic' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ToothGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UCBAdmissions' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKDriverDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKLungDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKgas' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USAccDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USArrests' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USJudgeRatings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USPersonalExpenditure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'VADeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'WWWusage' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'WorldPhones' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ability.cov' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'airmiles' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'airquality' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'anscombe' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'attenu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'attitude' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'austres' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'beavers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'cars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'chickwts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'co2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'crimtab' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'discoveries' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'esoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'euro' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'eurodist' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'faithful' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'freeny' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'infert' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'iris' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'iris3' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'islands' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'lh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'longley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'lynx' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'morley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'mtcars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'nhtemp' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'nottem' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'npk' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'occupationalStatus' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'precip' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'presidents' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'pressure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'quakes' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'randu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'rivers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'rock' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sleep' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'stackloss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'state' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspot.month' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspot.year' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspots' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'swiss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'treering' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'trees' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'uspop' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'volcano' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'warpbreaks' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'women' not found
make[3]: Leaving directory `/«PKGBUILDDIR»/src/library'
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writing package indices
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/usr/bin/make javaconf
make[1]: Entering directory `/«PKGBUILDDIR»'
make[2]: Entering directory `/«PKGBUILDDIR»/m4'
make[2]: Nothing to be done for `R'.
make[2]: Leaving directory `/«PKGBUILDDIR»/m4'
make[2]: Entering directory `/«PKGBUILDDIR»/tools'
make[2]: Nothing to be done for `R'.
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make[3]: Nothing to be done for `R'.
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make[2]: Entering directory `/«PKGBUILDDIR»/etc'
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make[3]: Entering directory `/«PKGBUILDDIR»/src/include'
make[4]: Entering directory `/«PKGBUILDDIR»/src/include/R_ext'
make[4]: Nothing to be done for `R'.
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make[3]: Leaving directory `/«PKGBUILDDIR»/src/include'
make[3]: Entering directory `/«PKGBUILDDIR»/src/extra'
make[4]: Entering directory `/«PKGBUILDDIR»/src/extra/tre'
make[5]: Entering directory `/«PKGBUILDDIR»/src/extra/tre'
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make[3]: Entering directory `/«PKGBUILDDIR»/src/appl'
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make[4]: `Makedeps' is up to date.
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make[3]: Entering directory `/«PKGBUILDDIR»/src/nmath'
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make[3]: Entering directory `/«PKGBUILDDIR»/src/unix'
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make[4]: Leaving directory `/«PKGBUILDDIR»/src/unix'
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gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g  -DR_HOME='"/«PKGBUILDDIR»"' -o Rscript \
	  ./Rscript.c
make[4]: Leaving directory `/«PKGBUILDDIR»/src/unix'
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make[3]: Entering directory `/«PKGBUILDDIR»/src/main'
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make[4]: `Makedeps' is up to date.
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make[5]: Entering directory `/«PKGBUILDDIR»/src/main'
/«PKGBUILDDIR»/lib/libR.so is unchanged
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/«PKGBUILDDIR»/bin/exec/R is unchanged
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make[3]: Entering directory `/«PKGBUILDDIR»/src/modules'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/internet'
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make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/internet'
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make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/lapack'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/lapack'
make[5]: `Makedeps' is up to date.
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make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/vfonts'
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make[5]: `Makedeps' is up to date.
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make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: `Makedeps' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: `R_X11.so' is up to date.
make[5]: `R_de.so' is up to date.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
make[5]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
/«PKGBUILDDIR»/modules/R_X11.so is unchanged
/«PKGBUILDDIR»/modules/R_de.so is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
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make[3]: Leaving directory `/«PKGBUILDDIR»/src/modules'
make[3]: Entering directory `/«PKGBUILDDIR»/src/library'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/profile'
building system startup profile
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make[4]: Entering directory `/«PKGBUILDDIR»/src/library/translations'
building package 'translations'
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make[4]: Entering directory `/«PKGBUILDDIR»/src/library/base'
building package 'base'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/base'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/base'
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make[4]: Entering directory `/«PKGBUILDDIR»/src/library/tools'
building package 'tools'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/tools'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/tools'
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make[6]: Entering directory `/«PKGBUILDDIR»/src/library/tools/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/tools/src'
make[7]: `Makedeps' is up to date.
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../../../../library/tools/libs/tools.so is unchanged
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make[4]: Entering directory `/«PKGBUILDDIR»/src/library/compiler'
building package 'compiler'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/compiler'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/compiler'
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make[5]: Nothing to be done for `mklazycomp'.
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make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/compiler'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/base'
make[4]: Nothing to be done for `mklazycomp'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/base'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/tools'
make[4]: Nothing to be done for `mklazycomp'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/tools'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
building package 'utils'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
all.R is unchanged
make[5]: Nothing to be done for `iconvlist'.
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make[5]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/utils/src'
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make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/utils/src'
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../../../../library/utils/libs/utils.so is unchanged
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/utils/src'
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make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/utils'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/utils'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/utils'
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make[4]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices'
building package 'grDevices'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
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make[6]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src'
../../../../library/grDevices/libs/grDevices.so is unchanged
make[8]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
make[9]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
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make[9]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices/src/cairo'
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make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grDevices'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/grDevices'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/graphics'
building package 'graphics'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/graphics'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics'
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../../../../library/graphics/libs/graphics.so is unchanged
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make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/graphics'
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make[4]: Entering directory `/«PKGBUILDDIR»/src/library/stats'
building package 'stats'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats'
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make[6]: Entering directory `/«PKGBUILDDIR»/src/library/stats/src'
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../../../../library/stats/libs/stats.so is unchanged
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make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/stats'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/datasets'
building package 'datasets'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/datasets'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/datasets'
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'AirPassengers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'AirPassengers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'BJsales' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'BJsales' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'BOD' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'BOD' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'CO2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'CO2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ChickWeight' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'ChickWeight' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'DNase' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'DNase' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'EuStockMarkets' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'EuStockMarkets' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Formaldehyde' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Formaldehyde' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'HairEyeColor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'HairEyeColor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Harman23.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Harman23.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Harman74.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Harman74.cor' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Indometh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Indometh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'InsectSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'InsectSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'JohnsonJohnson' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'JohnsonJohnson' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'LakeHuron' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'LakeHuron' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'LifeCycleSavings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'LifeCycleSavings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Loblolly' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Loblolly' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Nile' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Nile' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Orange' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Orange' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'OrchardSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'OrchardSprays' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'PlantGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'PlantGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Puromycin' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Puromycin' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Seatbelts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Seatbelts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Theoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Theoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'Titanic' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'Titanic' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ToothGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'ToothGrowth' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UCBAdmissions' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UCBAdmissions' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKDriverDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UKDriverDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKLungDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UKLungDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'UKgas' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'UKgas' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USAccDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USAccDeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USArrests' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USArrests' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USJudgeRatings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USJudgeRatings' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'USPersonalExpenditure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'USPersonalExpenditure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'VADeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'VADeaths' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'WWWusage' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'WWWusage' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'WorldPhones' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'WorldPhones' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'ability.cov' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'ability.cov' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'airmiles' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'airmiles' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'airquality' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'airquality' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'anscombe' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'anscombe' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'attenu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'attenu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'attitude' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'attitude' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'austres' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'austres' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'beavers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'beavers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'cars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'cars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'chickwts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'chickwts' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'co2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'co2' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'crimtab' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'crimtab' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'discoveries' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'discoveries' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'esoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'esoph' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'euro' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'euro' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'eurodist' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'eurodist' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'faithful' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'faithful' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'freeny' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'freeny' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'infert' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'infert' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'iris' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'iris' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'iris3' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'iris3' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'islands' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'islands' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'lh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'lh' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'longley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'longley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'lynx' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'lynx' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'morley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'morley' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'mtcars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'mtcars' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'nhtemp' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'nhtemp' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'nottem' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'nottem' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'npk' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'npk' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'occupationalStatus' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'occupationalStatus' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'precip' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'precip' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'presidents' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'presidents' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'pressure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'pressure' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'quakes' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'quakes' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'randu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'randu' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'rivers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'rivers' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'rock' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'rock' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sleep' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sleep' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'stackloss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'stackloss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'state' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'state' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspot.month' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sunspot.month' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspot.year' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sunspot.year' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'sunspots' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'sunspots' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'swiss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'swiss' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'treering' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'treering' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'trees' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'trees' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'uspop' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'uspop' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'volcano' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'volcano' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'warpbreaks' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'warpbreaks' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = dataEnv) :
  data set 'women' not found
Warning in utils::data(list = f, package = package, lib.loc = lib.loc, envir = tmpEnv) :
  data set 'women' not found
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/datasets'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/methods'
building package 'methods'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/methods'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/methods'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/methods'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/methods/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/methods/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/methods/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/methods/src'
../../../../library/methods/libs/methods.so is unchanged
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/methods/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/methods/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/methods'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/methods'
make[5]: Nothing to be done for `RfilesLazy'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/methods'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/methods'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/grid'
building package 'grid'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grid'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grid'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grid'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/grid/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/grid/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/grid/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/grid/src'
../../../../library/grid/libs/grid.so is unchanged
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/grid/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/grid/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grid'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/grid'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/grid'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/grid'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/splines'
building package 'splines'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/splines'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/splines'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/splines'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/splines/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/splines/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/splines/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/splines/src'
../../../../library/splines/libs/splines.so is unchanged
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/splines/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/splines/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/splines'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/splines'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/splines'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/splines'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/stats4'
building package 'stats4'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats4'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats4'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/stats4'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/stats4'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/stats4'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk'
building package 'tcltk'
all.R is unchanged
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk/src'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk/src'
make[6]: `Makedeps' is up to date.
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk/src'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk/src'
../../../../library/tcltk/libs/tcltk.so is unchanged
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk/src'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/tcltk'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/tcltk'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/parallel'
building package 'parallel'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/parallel'
all.R is unchanged
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/parallel'
make[6]: Entering directory `/«PKGBUILDDIR»/src/library/parallel/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/parallel/src'
make[7]: `Makedeps' is up to date.
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel/src'
make[7]: Entering directory `/«PKGBUILDDIR»/src/library/parallel/src'
../../../../library/parallel/libs/parallel.so is unchanged
make[7]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel/src'
make[6]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel/src'
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel'
make[5]: Entering directory `/«PKGBUILDDIR»/src/library/parallel'
make[5]: Nothing to be done for `mklazycomp'.
make[5]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/parallel'
make[4]: Entering directory `/«PKGBUILDDIR»/src/library/base'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/library/base'
installing parsed NAMESPACE files
make[3]: Leaving directory `/«PKGBUILDDIR»/src/library'
make[2]: Leaving directory `/«PKGBUILDDIR»/src'
make[2]: Entering directory `/«PKGBUILDDIR»/tests'
make[2]: Nothing to be done for `R'.
make[2]: Leaving directory `/«PKGBUILDDIR»/tests'
make[2]: Entering directory `/«PKGBUILDDIR»'
configuring Java ...
Java interpreter : /usr/bin/java
Java version     : 1.7.0_25
Java home path   : /usr/lib/jvm/java-7-openjdk-armhf/jre
Java compiler    : /usr/bin/javac
Java headers gen.: /usr/bin/javah
Java archive tool: /usr/bin/jar

trying to compile and link a JNI progam 
detected JNI cpp flags    : -I$(JAVA_HOME)/../include
detected JNI linker flags : -L$(JAVA_HOME)/lib/arm/server -ljvm
make[3]: Entering directory `/tmp/Rjavareconf.Z4jyhX'
gcc -std=gnu99 -I/«PKGBUILDDIR»/include -DNDEBUG -I/usr/lib/jvm/java-7-openjdk-armhf/jre/../include     -fpic  -O3 -pipe  -g  -c conftest.c -o conftest.o
gcc -std=gnu99 -shared -o conftest.so conftest.o -L/usr/lib/jvm/java-7-openjdk-armhf/jre/lib/arm/server -ljvm -L/«PKGBUILDDIR»/lib -lR
make[3]: Leaving directory `/tmp/Rjavareconf.Z4jyhX'


JAVA_HOME        : /usr/lib/jvm/java-7-openjdk-armhf/jre
Java library path: $(JAVA_HOME)/lib/arm/server
JNI cpp flags    : -I$(JAVA_HOME)/../include
JNI linker flags : -L$(JAVA_HOME)/lib/arm/server -ljvm
Updating Java configuration in /«PKGBUILDDIR»
Done.

make[2]: Leaving directory `/«PKGBUILDDIR»'
make[1]: Leaving directory `/«PKGBUILDDIR»'
touch make-arch-stamp
*** check ***
touch check-stamp
 fakeroot debian/rules binary-arch
*** install-arch ***
dh_testdir
dh_testroot
dh_prep -a
dh_installdirs -A
/«PKGBUILDDIR»/debian/r-base-core
/usr/bin/make DESTDIR=/«PKGBUILDDIR»/debian/r-base-core install
make[1]: Entering directory `/«PKGBUILDDIR»'
make[2]: Entering directory `/«PKGBUILDDIR»/m4'
make[2]: Nothing to be done for `install'.
make[2]: Leaving directory `/«PKGBUILDDIR»/m4'
make[2]: Entering directory `/«PKGBUILDDIR»/tools'
make[2]: Nothing to be done for `install'.
make[2]: Leaving directory `/«PKGBUILDDIR»/tools'
make[2]: Entering directory `/«PKGBUILDDIR»/doc'
installing doc ...
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/doc
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/man/man1
make[3]: Entering directory `/«PKGBUILDDIR»/doc/html'
installing doc/html ...
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/doc/html
make[3]: Leaving directory `/«PKGBUILDDIR»/doc/html'
make[3]: Entering directory `/«PKGBUILDDIR»/doc/manual'
installing doc/manual ...
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/doc/manual
make[3]: Leaving directory `/«PKGBUILDDIR»/doc/manual'
make[2]: Leaving directory `/«PKGBUILDDIR»/doc'
make[2]: Entering directory `/«PKGBUILDDIR»/etc'
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/lib/R/etc
installing etc ...
make[2]: Leaving directory `/«PKGBUILDDIR»/etc'
make[2]: Entering directory `/«PKGBUILDDIR»/share'
installing share ...
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/R
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/dictionaries
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/encodings
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/java
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/licenses
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/make
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/sh
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/texmf
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/texmf/bibtex/bib
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/texmf/bibtex/bst
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/texmf/tex/latex
make[2]: Leaving directory `/«PKGBUILDDIR»/share'
make[2]: Entering directory `/«PKGBUILDDIR»/src'
make[3]: Entering directory `/«PKGBUILDDIR»/src/scripts'
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/lib/R/bin
make[3]: Leaving directory `/«PKGBUILDDIR»/src/scripts'
make[3]: Entering directory `/«PKGBUILDDIR»/src/include'
make[4]: Entering directory `/«PKGBUILDDIR»/src/include/R_ext'
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/include/R_ext
make[4]: Leaving directory `/«PKGBUILDDIR»/src/include/R_ext'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/include'
make[3]: Entering directory `/«PKGBUILDDIR»/src/extra'
make[4]: Entering directory `/«PKGBUILDDIR»/src/extra/blas'
make[4]: Nothing to be done for `install'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/extra/blas'
make[4]: Entering directory `/«PKGBUILDDIR»/src/extra/bzip2'
make[4]: Nothing to be done for `install'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/extra/bzip2'
make[4]: Entering directory `/«PKGBUILDDIR»/src/extra/pcre'
make[4]: Nothing to be done for `install'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/extra/pcre'
make[4]: Entering directory `/«PKGBUILDDIR»/src/extra/tre'
make[4]: Nothing to be done for `install'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/extra/tre'
make[4]: Entering directory `/«PKGBUILDDIR»/src/extra/xdr'
make[4]: Nothing to be done for `install'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/extra/xdr'
make[4]: Entering directory `/«PKGBUILDDIR»/src/extra/xz'
make[4]: Nothing to be done for `install'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/extra/xz'
make[4]: Entering directory `/«PKGBUILDDIR»/src/extra/zlib'
make[4]: Nothing to be done for `install'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/extra/zlib'
make[4]: Entering directory `/«PKGBUILDDIR»/src/extra/intl'
make[4]: Nothing to be done for `install'.
make[4]: Leaving directory `/«PKGBUILDDIR»/src/extra/intl'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/extra'
make[3]: Entering directory `/«PKGBUILDDIR»/src/appl'
make[3]: Nothing to be done for `install'.
make[3]: Leaving directory `/«PKGBUILDDIR»/src/appl'
make[3]: Entering directory `/«PKGBUILDDIR»/src/nmath'
make[3]: Nothing to be done for `install'.
make[3]: Leaving directory `/«PKGBUILDDIR»/src/nmath'
make[3]: Entering directory `/«PKGBUILDDIR»/src/unix'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g  -DR_HOME='"/usr/lib/R"' -o Rscript \
	  ./Rscript.c
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/lib/pkgconfig
make[3]: Leaving directory `/«PKGBUILDDIR»/src/unix'
make[3]: Entering directory `/«PKGBUILDDIR»/src/main'
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/lib/R/bin/exec
make[4]: Entering directory `/«PKGBUILDDIR»/src/main'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[4]: Entering directory `/«PKGBUILDDIR»/src/main'
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/lib/R/lib
make[4]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/main'
make[3]: Entering directory `/«PKGBUILDDIR»/src/modules'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/internet'
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/lib/R/modules
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/internet'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/lapack'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/lapack'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/vfonts'
make[4]: Entering directory `/«PKGBUILDDIR»/src/modules/X11'
make[4]: Leaving directory `/«PKGBUILDDIR»/src/modules/X11'
make[3]: Leaving directory `/«PKGBUILDDIR»/src/modules'
make[3]: Entering directory `/«PKGBUILDDIR»/src/library'
mkdir -p -- /«PKGBUILDDIR»/debian/r-base-core/usr/lib/R/library
installing packages ...
  building HTML index ...
make[3]: Leaving directory `/«PKGBUILDDIR»/src/library'
make[2]: Leaving directory `/«PKGBUILDDIR»/src'
make[2]: Entering directory `/«PKGBUILDDIR»/tests'
make[2]: Nothing to be done for `install'.
make[2]: Leaving directory `/«PKGBUILDDIR»/tests'
make[1]: Leaving directory `/«PKGBUILDDIR»'
(cd src/unix; 						\
		rm -vf Rscript /«PKGBUILDDIR»/debian/r-base-core/usr/bin/Rscript;	\
		/usr/bin/make	CFLAGS="-O3 -pipe  -g -D_REENTRANT"		\
			CXXFLAGS="-O3 -pipe  -g -D_REENTRANT"	\
			FFLAGS="-O3 -pipe  -g -D_REENTRANT"	\
			CC="gcc -std=gnu99"				\
			CXX=g++			\
			F77=gfortran			\
			RHOME=/usr/lib/R			\
			DESTDIR=/«PKGBUILDDIR»/debian/r-base-core			\
			install-Rscript )
removed 'Rscript'
removed '/«PKGBUILDDIR»/debian/r-base-core/usr/bin/Rscript'
make[1]: Entering directory `/«PKGBUILDDIR»/src/unix'
gcc -std=gnu99 -I. -I../../src/include -I../../src/include   -DHAVE_CONFIG_H   -fopenmp -fpic  -O3 -pipe  -g -D_REENTRANT -DR_HOME='"/usr/lib/R"' -o Rscript \
	  ./Rscript.c
make[1]: Leaving directory `/«PKGBUILDDIR»/src/unix'
#ls -ltr /«PKGBUILDDIR»/debian/r-base-core/usr/bin/
#strings src/unix/Rscript					
cp -vax src/unix/Rscript /«PKGBUILDDIR»/debian/r-base-core/usr/bin/
'src/unix/Rscript' -> '/«PKGBUILDDIR»/debian/r-base-core/usr/bin/Rscript'
#ls -ltr /«PKGBUILDDIR»/debian/r-base-core/usr/bin/
#strings /«PKGBUILDDIR»/debian/r-base-core/usr/bin/Rscript
(cd src/nmath/standalone;				\
		/usr/bin/make DESTDIR=/«PKGBUILDDIR»/debian/r-base-core install )
make[1]: Entering directory `/«PKGBUILDDIR»/src/nmath/standalone'
make[2]: Entering directory `/«PKGBUILDDIR»/src/include'
make[2]: `Rmath.h' is up to date.
make[2]: Leaving directory `/«PKGBUILDDIR»/src/include'
/«PKGBUILDDIR»/debian/r-base-core/usr/share/R/include/Rmath.h is unchanged
make[1]: Leaving directory `/«PKGBUILDDIR»/src/nmath/standalone'
chmod a+x	/«PKGBUILDDIR»/debian/r-base-core/usr/share/R/share/sh/echo.sh		
rm -v	/«PKGBUILDDIR»/debian/r-base-core/usr/lib/R/COPYING  		
removed '/«PKGBUILDDIR»/debian/r-base-core/usr/lib/R/COPYING'
(cd /«PKGBUILDDIR»/debian/r-base-core/usr/lib/R/; \
		ln -s ../../share/common-licenses/GPL-2 COPYING)
rm -v	/«PKGBUILDDIR»/debian/r-base-core/usr/share/R/doc/COPYING  	
removed '/«PKGBUILDDIR»/debian/r-base-core/usr/share/R/doc/COPYING'
(cd /«PKGBUILDDIR»/debian/r-base-core/usr/share/R/doc; \
		ln -s ../../../share/common-licenses/GPL-2 COPYING)
# edd 03 Oct 2006  use link into /usr/share/, not /usr/lib/
(cd /«PKGBUILDDIR»/debian/r-base-core/usr/share/texmf/tex/latex && 	\
	    ln -s ../../../R/share/texmf R)
dh_movefiles	--sourcedir=debian/r-base-core -pr-doc-html
dh_movefiles	--sourcedir=debian/r-base-core -pr-base-html
dh_movefiles	--sourcedir=debian/r-base-core -pr-base-latex
make		prefix=/«PKGBUILDDIR»/debian/r-base-core/usr			\
			rdocdir=/«PKGBUILDDIR»/debian/r-base-core/usr/share/R/doc	\
			install-pdf
make[1]: Entering directory `/«PKGBUILDDIR»'
make[2]: Entering directory `/«PKGBUILDDIR»/doc/manual'
creating doc/manual/version.tex
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Converting parsed Rd's to LaTeX .........................................
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collecting LaTeX docs for package 'grDevices' ...
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collecting LaTeX docs for package 'graphics' ...
Converting parsed Rd's to LaTeX .......
collecting LaTeX docs for package 'stats' ...
Converting parsed Rd's to LaTeX ..............................
collecting LaTeX docs for package 'datasets' ...
Converting parsed Rd's to LaTeX ........
collecting LaTeX docs for package 'methods' ...
Converting parsed Rd's to LaTeX .......
collecting LaTeX docs for package 'grid' ...
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collecting LaTeX docs for package 'splines' ...
Converting parsed Rd's to LaTeX .
collecting LaTeX docs for package 'stats4' ...
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collecting LaTeX docs for package 'tcltk' ...
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collecting LaTeX docs for package 'compiler' ...
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collecting LaTeX docs for package 'parallel' ...
Converting parsed Rd's to LaTeX .
PDF/LaTeX documentation: full reference index ...
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Chapter 1.
(/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd)
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[]\T1/ptm/m/n/10 logical, in-di-cat-ing if an `x[i]' equal to the low-est (or h
igh-est, for
[1] [2]
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[]\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber \T1/zi4/m/n/10 x \T1
/ptm/m/n/10 such that \T1/zi4/m/n/10 1 - x != 1\T1/ptm/m/n/10 .

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\T1/ptm/m/n/10 It equals \T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits \T1
/ptm/m/n/10 if

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g \T1/ptm/m/n/10 is 0; oth-er-wise, it is

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[]\T1/ptm/m/n/10 the largest nor-mal-ized floating-point num-ber. Typ-i-cally, 
it is equal to
[3] [4] [5]
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[]\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][]\T1/zi4/m/n/
10 options[][][]("pkgType")\T1/ptm/m/n/10 . Val-ues
[6]
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[]\T1/ptm/m/n/10 logical: should \T1/zi4/m/n/10 minlength \T1/ptm/m/n/10 be ob-
served strictly? Note that set-ting
[7] [8]
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[]\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `\T
1/zi4/m/n/10 insertions\T1/ptm/m/n/10 ',
[9] [10] [11] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd)
[12] [13] [14] [15] [16] [17]
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[]\T1/ptm/m/n/10 If the calls to \T1/zi4/m/n/10 FUN \T1/ptm/m/n/10 re-turn vec-
tors of dif-fer-ent lengths, \T1/zi4/m/n/10 apply \T1/ptm/m/n/10 re-turns a lis
t of length
[18] [19] [20] [21]
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[]\T1/zi4/m/n/10 %% \T1/ptm/m/n/10 in-di-cates \T1/zi4/m/n/10 x mod y \T1/ptm/m
/n/10 and \T1/zi4/m/n/10 %/% \T1/ptm/m/n/10 in-di-cates in-te-ger di-vi-sion. I
t is guar-an-teed that
[22] [23] [24] [25] [26] [27] [28] [29] [30] [31]
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[]\T1/ptm/m/n/10 a date-time ob-ject, or some-thing which can be co-erced by
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[47]
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[49] [50] [51] [52] [53] [54]
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[]\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim
-ited by set-ting
[55] [56] [57] [58] [59] [60] [61] [62] [63]
Underfull \hbox (badness 2970) in paragraph at lines 3955--3961
[]\T1/ptm/m/n/10 is there sup-port the [][]\T1/zi4/m/n/10 svg[][][]\T1/ptm/m/n/
10 , [][]\T1/zi4/m/n/10 cairo_pdf[][][] \T1/ptm/m/n/10 and [][]\T1/zi4/m/n/10 c
airo_ps[][][] \T1/ptm/m/n/10 de-vices, and for
[64] [65] [66] [67] [68] [69] [70] [71] [72]
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[]\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c
har-ac-ter by
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[88] [89] [90] [91]
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[]\T1/ptm/m/n/10 New restarts for \T1/zi4/m/n/10 withRestarts \T1/ptm/m/n/10 ca
n be spec-i-fied in sev-eral ways. The sim-plest is in
[92] [93] [94] [95]
Underfull \hbox (badness 10000) in paragraph at lines 6048--6051
[]\T1/ptm/m/n/10 A note on `\T1/zi4/m/n/10 file://\T1/ptm/m/n/10 ' URLs. The mo
st gen-eral form (from RFC1738) is
[96] [97] [98]
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\T1/zi4/m/n/10 txt$[][]\T1/ptm/m/n/10 ), which can also be spec-i-fied as \T1/z
i4/m/n/10 "X11_primary" \T1/ptm/m/n/10 and the sec-ondary se-lec-tion as
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[]\T1/ptm/m/n/10 logical, in-di-cat-ing if an `x[i]' equal to the low-est (or h
igh-est, for
[109]
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[][][]\T1/zi4/m/n/10 split[][][] \T1/ptm/m/n/10 for split-ting a vari-able ac-c
ord-ing to a group fac-tor; [][]\T1/zi4/m/n/10 factor[][][]\T1/ptm/m/n/10 , [][
]\T1/zi4/m/n/10 tabulate[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 table[][][]\T
1/ptm/m/n/10 ,
[110] [111] [112] [113]
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[]\T1/zi4/m/n/10 data.frame \T1/ptm/m/n/10 con-verts each of its ar-gu-ments to
 a data frame by call-ing
[114]
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[][][]\T1/zi4/m/n/10 I[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 plot.data.frame
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 print.data.frame[][][]\T1/ptm/m/n/10 
, [][]\T1/zi4/m/n/10 row.names[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 names[]
[][] \T1/ptm/m/n/10 (for the col-umn names),

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[][]\T1/zi4/m/n/10 [.data.frame[][][] \T1/ptm/m/n/10 for sub-set-ting meth-ods,
 [][]\T1/zi4/m/n/10 Math.data.frame[][][] \T1/ptm/m/n/10 etc, about \T1/ptm/m/i
t/10 Group \T1/ptm/m/n/10 meth-ods for
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[]\T1/ptm/m/n/10 Subtraction of date-time ob-jects gives an ob-ject of this cla
ss, by call-ing \T1/zi4/m/n/10 difftime \T1/ptm/m/n/10 with
[139] [140] [141] [142] [143] [144] [145]
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[][][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki / IEEE _ 754-[]198
5$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wi
ki / IEEE _
[146] [147] [148] [149] [150] [151]
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[]\T1/ptm/m/n/10 logical in-di-cat-ing if du-pli-ca-tion should be con-sid-ered
 from the re-verse

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[]\T1/ptm/m/n/10 For the de-fault meth-ods, and when-ever there are equiv-a-len
t method def-i-ni-tions for

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[]\T1/ptm/m/n/10 Except for fac-tors, log-i-cal and raw vec-tors the de-fault \
T1/zi4/m/n/10 nmax = NA \T1/ptm/m/n/10 is equiv-a-lent to
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[164] [165] [166]
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[]\T1/ptm/m/n/10 When eval-u-at-ing ex-pres-sions in a data frame that has been
 passed as an ar-gu-ment

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\T1/ptm/m/n/10 to a func-tion, the rel-e-vant en-clo-sure is of-ten the caller'
s en-vi-ron-ment, i.e., one needs
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[]\T1/ptm/m/n/10 Both \T1/zi4/m/n/10 $ \T1/ptm/m/n/10 and \T1/zi4/m/n/10 [[ \T1
/ptm/m/n/10 can be ap-plied to en-vi-ron-ments. Only char-ac-ter in-dices are a
l-lowed

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\T1/ptm/m/n/10 and no par-tial match-ing is done. The se-man-tics of these op-e
r-a-tions are those of
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[187] [188] [189]
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[]\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is
 done: see
[190]
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[][][]\T1/zi4/m/n/10 Sys.readlink[][][] \T1/ptm/m/n/10 to find out about sym-bo
lic links, [][]\T1/zi4/m/n/10 files[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 fi
le.access[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files[][][]\T1/ptm/m/n/
10 , and
[191]
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[]\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as \T1/zi4/m
/n/10 PATH \T1/ptm/m/n/10 and \T1/zi4/m/n/10 R_LIBS \T1/ptm/m/n/10 with
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[]\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For \T1/
zi4/m/n/10 file.copy \T1/ptm/m/n/10 and
[194]
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[][][]\T1/zi4/m/n/10 file.info[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.ac
cess[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.path[][][]\T1/ptm/m/n/10 , [
][]\T1/zi4/m/n/10 file.show[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 unlink[][][]\T1/ptm/m/n/10 , [][]\T1/
zi4/m/n/10 basename[][][]\T1/ptm/m/n/10 ,

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[][][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki / Hard _ link$[][]
 \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki 
/
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[]\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr
i-bu-tion func-tion, and in-deed,
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[]\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][]
\T1/zi4/m/n/10 complex[][][] \T1/ptm/m/n/10 only for
[210]
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[]\T1/ptm/m/n/10 If you set \T1/zi4/m/n/10 format \T1/ptm/m/n/10 it over-rides 
the set-ting of \T1/zi4/m/n/10 mode\T1/ptm/m/n/10 , so

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[]\T1/zi4/m/n/10 formatC \T1/ptm/m/n/10 does not nec-es-sar-ily align the num-b
ers on the dec-i-mal point, so
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[][]\T1/zi4/m/n/10 library.dynam[][][]\T1/ptm/m/n/10 , or can be found af-ter t
he DLL has been loaded us-ing
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\T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing \
T1/zi4/m/n/10 CRoutine\T1/ptm/m/n/10 , \T1/zi4/m/n/10 CallRoutine\T1/ptm/m/n/10
 ,
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[]\T1/ptm/m/n/10 character string con-tain-ing a [][]reg-u-lar ex-pres-sion[][]
[] (or char-ac-ter string for
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[]\T1/ptm/m/n/10 The TRE li-brary of Ville Lau-rikari ([][]$\T1/zi4/m/n/10 http
 : / / laurikari . net / tre/$[][]\T1/ptm/m/n/10 ) is used ex-cept for
[238] [239] [240] [241] [242] [243]
Underfull \hbox (badness 1478) in paragraph at lines 15708--15711
[]\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha
r-ac-ter vec-tor
[244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254]
Underfull \hbox (badness 1442) in paragraph at lines 16391--16393
[]\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed 
and by [][]\T1/zi4/m/n/10 dev.new[][][]\T1/ptm/m/n/10 : see
[255]
Underfull \hbox (badness 2452) in paragraph at lines 16483--16499
[][][]\T1/zi4/m/n/10 as.character[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.c
omplex[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.double[][][]\T1/ptm/m/n/10 ,
 [][]\T1/zi4/m/n/10 as.integer[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.logi
cal[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.raw[][][]\T1/ptm/m/n/10 , [][]\
T1/zi4/m/n/10 as.vector[][][]\T1/ptm/m/n/10 ,
[256] [257] [258] [259] [260] [261] [262] [263] [264] [265] [266]
Underfull \hbox (badness 4739) in paragraph at lines 17130--17132
[]\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere
d, see
[267] [268] [269] [270] [271] [272] [273] [274] [275] [276] [277] [278]
[279] [280]
Underfull \hbox (badness 10000) in paragraph at lines 18012--18016
[]\T1/ptm/m/n/10 By de-fault \T1/zi4/m/n/10 R_LIBS \T1/ptm/m/n/10 is un-set, an
d \T1/zi4/m/n/10 R_LIBS_USER \T1/ptm/m/n/10 is set to di-rec-tory

Underfull \hbox (badness 2460) in paragraph at lines 18012--18016
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 R/\T1/ptm/m/sl/10 R.version$platform\T1/zi4/m/n/
10 -library/\T1/ptm/m/sl/10 x.y\T1/ptm/m/n/10 ' of the home di-rec-tory (or `\T
1/zi4/m/n/10 Library/R/\T1/ptm/m/sl/10 x.y\T1/zi4/m/n/10 /library\T1/ptm/m/n/10
 '
[281] [282]
Underfull \hbox (badness 1014) in paragraph at lines 18165--18170
[]\T1/ptm/m/n/10 Normally \T1/zi4/m/n/10 library \T1/ptm/m/n/10 re-turns (in-vi
s-i-bly) the list of at-tached pack-ages, but \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/1
0 or \T1/zi4/m/n/10 FALSE \T1/ptm/m/n/10 if
[283] [284] [285] [286] [287] [288] [289] [290] [291] [292] [293]
Underfull \hbox (badness 1264) in paragraph at lines 18872--18877
[]\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways 
be sup-ported:
[294] [295] [296] [297] [298] [299] [300] [301] [302] [303] [304] [305]
Underfull \hbox (badness 10000) in paragraph at lines 19606--19608
[]\T1/ptm/m/n/10 The al-go-rithm used by \T1/zi4/m/n/10 make.unique \T1/ptm/m/n
/10 has the prop-erty that
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[318] [319] [320] [321]
Underfull \hbox (badness 1655) in paragraph at lines 20594--20600
[][][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki / Data _ compressi
on$[][] \T1/ptm/m/n/10 for back-ground on data com-pres-sion,
[322] [323]
Underfull \hbox (badness 1484) in paragraph at lines 20755--20763
[]\T1/ptm/m/n/10 The address-space limit is 2Gb un-der 32-bit Win-dows un-less 
the OS's de-fault has been
[324] [325] [326] [327] [328]
Underfull \hbox (badness 2790) in paragraph at lines 21022--21025
[]\T1/zi4/m/n/10 packageStartupMessage \T1/ptm/m/n/10 is a vari-ant whose mes-s
ages can be sup-pressed sep-a-rately by

Underfull \hbox (badness 1571) in paragraph at lines 21022--21025
\T1/zi4/m/n/10 suppressPackageStartupMessages\T1/ptm/m/n/10 . (They are still m
es-sages, so can be sup-pressed by
[329] [330] [331] [332] [333] [334]
Underfull \hbox (badness 10000) in paragraph at lines 21461--21464
[]\T1/ptm/m/n/10 It is pos-si-ble to up-date just part of the names at-tribute 
via the gen-eral rules:

Underfull \hbox (badness 10000) in paragraph at lines 21461--21464
\T1/ptm/m/n/10 see the ex-am-ples. This works be-cause the ex-pres-sion there i
s eval-u-ated as
[335] [336] [337] [338] [339] [340] [341] [342] [343] [344] [345] [346]
[347] [348] [349] [350] [351]
Underfull \hbox (badness 1199) in paragraph at lines 22508--22514
[]\T1/ptm/m/n/10 The de-fault method for \T1/zi4/m/n/10 is.numeric \T1/ptm/m/n/
10 re-turns \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/10 if its ar-gu-ment is of [][]mode
[][][] \T1/zi4/m/n/10 "numeric"

Underfull \hbox (badness 2027) in paragraph at lines 22508--22514
\T1/ptm/m/n/10 ([][]type[][][] \T1/zi4/m/n/10 "double" \T1/ptm/m/n/10 or type \
T1/zi4/m/n/10 "integer"\T1/ptm/m/n/10 ) and not a fac-tor, and \T1/zi4/m/n/10 F
ALSE \T1/ptm/m/n/10 oth-er-wise. That is,
[352] [353] [354] [355] [356] [357] [358] [359]
Underfull \hbox (badness 1038) in paragraph at lines 23037--23046
[]\T1/ptm/m/n/10 the pack-ages that are at-tached by de-fault when \T1/phv/m/n/
10 R \T1/ptm/m/n/10 starts up. Ini-tially

Underfull \hbox (badness 1881) in paragraph at lines 23047--23050
[]\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str
ucts which are

Underfull \hbox (badness 6220) in paragraph at lines 23066--23068
[]\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see

[360]
Underfull \hbox (badness 10000) in paragraph at lines 23130--23139
[]\T1/ptm/m/n/10 the com-mand used for dis-play-ing text files by [][]\T1/zi4/m
/n/10 file.show[][][]\T1/ptm/m/n/10 . De-faults to

Underfull \hbox (badness 2600) in paragraph at lines 23130--23139
\T1/ptm/m/n/10 `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /bin/pager\T1/pt
m/m/n/10 ', which se-lects a pager via the \T1/zi4/m/n/10 PAGER \T1/ptm/m/n/10 
en-vi-ron-ment vari-able

Underfull \hbox (badness 2142) in paragraph at lines 23140--23146
[]\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][]\T1/zi4/m/n/10 postscr
ipt[][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able

Underfull \hbox (badness 1968) in paragraph at lines 23153--23158
[]\T1/ptm/m/n/10 the com-mand used by [][]\T1/zi4/m/n/10 postscript[][][] \T1/p
tm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able

Underfull \hbox (badness 10000) in paragraph at lines 23163--23172
[]\T1/ptm/m/n/10 Used for the readline-based ter-mi-nal in-ter-face. De-fault v
alue
[361] [362] [363]
Underfull \hbox (badness 10000) in paragraph at lines 23404--23410
[]\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][]\T1/zi4/m/
n/10 setRepositories[][][]\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 23404--23410
\T1/ptm/m/n/10 e.g. the de-fault `\T1/zi4/m/n/10 "http://www.bioconductor.org"\
T1/ptm/m/n/10 ' or the Eu-ro-pean mir-

Underfull \hbox (badness 10000) in paragraph at lines 23404--23410
\T1/ptm/m/n/10 ror `\T1/zi4/m/n/10 "http://bioconductor.statistik.tu-dortmund.d
e"\T1/ptm/m/n/10 '. Can be set by

Underfull \hbox (badness 10000) in paragraph at lines 23416--23419
[]\T1/ptm/m/n/10 default Cc: ad-dress used by [][]\T1/zi4/m/n/10 create.post[][
][] \T1/ptm/m/n/10 (and hence[][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/n/10
 and

Underfull \hbox (badness 2689) in paragraph at lines 23441--23443
[]\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na
l HTTP server, see
[364]
Underfull \hbox (badness 7203) in paragraph at lines 23469--23472
[]\T1/ptm/m/n/10 default email-ing method used by [][]\T1/zi4/m/n/10 create.pos
t[][][] \T1/ptm/m/n/10 and hence [][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/
n/10 and

Underfull \hbox (badness 3128) in paragraph at lines 23479--23485
\T1/ptm/m/n/10 Pos-si-ble val-ues are \T1/zi4/m/n/10 "source" \T1/ptm/m/n/10 (t
he de-fault ex-cept un-der the CRAN OS X build)

Underfull \hbox (badness 1881) in paragraph at lines 23479--23485
\T1/ptm/m/n/10 and \T1/zi4/m/n/10 "mac.binary."\T1/ptm/m/n/10 . Win-dows uses \
T1/zi4/m/n/10 "win.binary"\T1/ptm/m/n/10 . (\T1/zi4/m/n/10 "mac.binary.leopard"
 \T1/ptm/m/n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 23487--23494
[]\T1/ptm/m/n/10 URLs of the repos-i-to-ries for use by [][]\T1/zi4/m/n/10 upda
te.packages[][][]\T1/ptm/m/n/10 . De-faults to

Underfull \hbox (badness 10000) in paragraph at lines 23487--23494
\T1/zi4/m/n/10 c(CRAN="@CRAN@")\T1/ptm/m/n/10 , a value that causes some util-i
-ties to prompt for a

Underfull \hbox (badness 6380) in paragraph at lines 23487--23494
\T1/ptm/m/n/10 CRAN mir-ror. To avoid this do set the CRAN mir-ror, by some-thi
ng like

Underfull \hbox (badness 1082) in paragraph at lines 23487--23494
\T1/zi4/m/n/10 local({r <- getOption("repos"); r["CRAN"] <- "http://my.local.cr
an";
[365] [366] [367] [368]
Underfull \vbox (badness 3803) has occurred while \output is active [369]
Underfull \hbox (badness 10000) in paragraph at lines 23795--23799
[]\T1/ptm/m/n/10 The outer prod-uct of the ar-rays \T1/zi4/m/n/10 X \T1/ptm/m/n
/10 and \T1/zi4/m/n/10 Y \T1/ptm/m/n/10 is the ar-ray \T1/zi4/m/n/10 A \T1/ptm/
m/n/10 with di-men-sion

Underfull \hbox (badness 10000) in paragraph at lines 23795--23799
\T1/zi4/m/n/10 c(dim(X), dim(Y)) \T1/ptm/m/n/10 where el-e-ment \T1/zi4/m/n/10 
A[c(arrayindex.x, arrayindex.y)]
[370] [371] [372] [373] [374]
Underfull \hbox (badness 1748) in paragraph at lines 24116--24120
\T1/ptm/m/n/10 seem un-de-sir-able, e.g., when past-ing two char-ac-ter vec-tor
s, or very de-sir-able, e.g. in
[375] [376] [377] [378] [379] [380] [381] [382]
Underfull \hbox (badness 2726) in paragraph at lines 24615--24618
[]\T1/ptm/m/n/10 character string (or \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 ) in-di
-cat-ing [][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 val-ues in printed out-put,
 see
[383] [384] [385] [386] [387] [388] [389] [390] [391] [392] [393] [394]
[395]
Underfull \hbox (badness 1052) in paragraph at lines 25420--25425
[]\T1/zi4/m/n/10 qr.X \T1/ptm/m/n/10 re-turns $\OML/cmm/b/it/10 X$\T1/ptm/m/n/1
0 , the orig-i-nal ma-trix from which the qr ob-ject was con-structed, pro-vide
d
[396] [397] [398] [399] [400] [401] [402] [403] [404] [405]
Underfull \hbox (badness 1533) in paragraph at lines 26125--26128
[]\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca
n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the
[406] [407] [408] [409] [410] [411] [412] [413] [414] [415] [416] [417]
[418] [419] [420] [421] [422] [423] [424] [425] [426] [427] [428] [429]
[430] [431]
Underfull \hbox (badness 10000) in paragraph at lines 27753--27757
[]\T1/zi4/m/n/10 regexpr \T1/ptm/m/n/10 and \T1/zi4/m/n/10 gregexpr \T1/ptm/m/n
/10 sup-port `named cap-ture'. If groups are named, e.g.,

Underfull \hbox (badness 1221) in paragraph at lines 27753--27757
\T1/zi4/m/n/10 "(?<first>[A-Z][a-z]+)" \T1/ptm/m/n/10 then the po-si-tions of t
he matches are also re-turned by name.

Underfull \hbox (badness 6188) in paragraph at lines 27776--27778
[]\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 http : / / p
ubs . opengroup . org / onlinepubs / 9699919799 /
[432] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] [443]
[444] [445] [446] [447] [448] [449] [450]
Underfull \hbox (badness 10000) in paragraph at lines 28975--28978
[]\T1/zi4/m/n/10 save.image() \T1/ptm/m/n/10 is just a short-cut for `save my c
ur-rent workspace', i.e.,
[451] [452] [453] [454]
Underfull \hbox (badness 2302) in paragraph at lines 29175--29182
[]\T1/ptm/m/n/10 The root-mean-square for a (pos-si-bly cen-tered) col-umn is d
e-fined as $[]$,

Underfull \hbox (badness 2837) in paragraph at lines 29175--29182
\T1/ptm/m/n/10 where $\OML/cmm/m/it/10 x$ \T1/ptm/m/n/10 is a vec-tor of the no
n-missing val-ues and $\OML/cmm/m/it/10 n$ \T1/ptm/m/n/10 is the num-ber of non
-missing

Underfull \hbox (badness 2980) in paragraph at lines 29175--29182
\T1/ptm/m/n/10 val-ues. In the case \T1/zi4/m/n/10 center = TRUE\T1/ptm/m/n/10 
, this is the same as the stan-dard de-vi-a-tion,

Underfull \hbox (badness 2181) in paragraph at lines 29175--29182
\T1/ptm/m/n/10 but in gen-eral it is not. (To scale by the stan-dard de-vi-a-ti
ons with-out cen-ter-ing, use
[455] [456]
Underfull \hbox (badness 2261) in paragraph at lines 29328--29333
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 strip.white \T1/ptm/m/n/10 is of length 1, i
t ap-plies to all fields; oth-er-wise, if

Underfull \hbox (badness 10000) in paragraph at lines 29355--29361
[]\T1/ptm/m/n/10 The es-capes which are in-ter-preted are the con-trol char-ac-
ters
[457]
Underfull \hbox (badness 10000) in paragraph at lines 29428--29433
[]\T1/ptm/m/n/10 Note that since \T1/zi4/m/n/10 sep \T1/ptm/m/n/10 is a sep-a-r
a-tor and not a ter-mi-na-tor, read-ing a file by
[458] [459] [460] [461] [462] [463] [464] [465] [466] [467] [468] [469]
[470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481]
[482] [483] [484] [485] [486] [487] [488] [489] [490] [491] [492] [493]
[494] [495] [496] [497] [498] [499] [500]
Underfull \hbox (badness 1072) in paragraph at lines 32177--32181
[]\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea
d from the file spec-i-fied by

Underfull \hbox (badness 10000) in paragraph at lines 32182--32186
[]\T1/ptm/m/n/10 The command-line op-tion `\T1/zi4/m/n/10 --vanilla\T1/ptm/m/n/
10 ' im-plies `\T1/zi4/m/n/10 --no-site-file\T1/ptm/m/n/10 ', `\T1/zi4/m/n/10 -
-no-init-file\T1/ptm/m/n/10 ',

Underfull \hbox (badness 10000) in paragraph at lines 32210--32216
[]\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file
s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 '

Underfull \hbox (badness 10000) in paragraph at lines 32210--32216
\T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for
 first in architecture-specific di-rec-to-ries, e.g.

Underfull \hbox (badness 3343) in paragraph at lines 32223--32230
\T1/ptm/m/n/10 early in the start-up pro-cess-ing. It con-tains en-vi-ron-ment 
vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the

Underfull \hbox (badness 2573) in paragraph at lines 32223--32230
\T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i
n site or user en-vi-ron-ment

Underfull \hbox (badness 1917) in paragraph at lines 32223--32230
\T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/
n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from
[501] [502] [503] [504] [505]
Underfull \hbox (badness 10000) in paragraph at lines 32513--32519
[]\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the \T1/zi4/m/n/10 form
at \T1/ptm/m/n/10 meth-ods is
[506] [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517]
[518] [519] [520] [521] [522] [523] [524] [525] [526] [527] [528]
Underfull \vbox (badness 10000) has occurred while \output is active [529]
[530]
Underfull \hbox (badness 4416) in paragraph at lines 34070--34072
[]\T1/ptm/m/n/10 Argument \T1/zi4/m/n/10 names \T1/ptm/m/n/10 was in-tro-duced 
in \T1/phv/m/n/10 R \T1/ptm/m/n/10 2.13.0 to avoid need-ing the com-mon use of
[531]
Underfull \hbox (badness 3333) in paragraph at lines 34167--34172
[]\T1/ptm/m/n/10 If a file-name starts with \T1/zi4/m/n/10 . \T1/ptm/m/n/10 thi
s may need to be matched ex-plic-itly: for ex-am-ple
[532] [533] [534] [535] [536] [537] [538] [539] [540] [541]
Underfull \hbox (badness 1472) in paragraph at lines 34774--34777
[]\T1/ptm/m/n/10 logical. If \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , func-tions kee
p their source in-clud-ing com-ments, see
[542] [543] [544] [545] [546] [547] [548] [549] [550] [551]
Underfull \hbox (badness 2671) in paragraph at lines 35431--35434
[]\T1/ptm/m/n/10 levels to re-move for all fac-tors in \T1/zi4/m/n/10 ...\T1/pt
m/m/n/10 . If set to \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 , it im-plies
[552] [553] [554] [555] [556] [557]
Underfull \hbox (badness 10000) in paragraph at lines 35829--35832
[][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [
][]$http : / / developer . r-[]project . org /
[558] [559]
Underfull \hbox (badness 10000) in paragraph at lines 35950--35954
[][][]\T1/zi4/m/n/10 addTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 r
emoveTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 getTaskCallbackNames
[][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 http : / / developer .
[560]
Underfull \hbox (badness 10000) in paragraph at lines 36012--36016
[][][]\T1/zi4/m/n/10 addTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 r
emoveTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 taskCallbackManager[
][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 http : / / developer .
[561] [562] [563] [564] [565] [566] [567] [568] [569] [570] [571] [572]
[573] [574] [575] [576] [577] [578]
Underfull \hbox (badness 1990) in paragraph at lines 37137--37145
[]\T1/zi4/m/n/10 try \T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any e
r-rors that oc-cur dur-ing the eval-u-a-tion. If

Underfull \hbox (badness 4846) in paragraph at lines 37137--37145
\T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][
]\T1/zi4/m/n/10 stderr[][][] \T1/ptm/m/n/10 con-nec-tion un-less
[579] [580] [581] [582]
Underfull \hbox (badness 1515) in paragraph at lines 37406--37411
[]\T1/ptm/m/n/10 On most plat-forms `file' in-cludes sym-bolic links, fi-fos an
d sock-ets. Prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 2.15.0
[583] [584] [585]
Underfull \hbox (badness 1917) in paragraph at lines 37636--37643
[]\T1/ptm/m/n/10 When a func-tion call-ing \T1/zi4/m/n/10 UseMethod("fun") \T1/
ptm/m/n/10 is ap-plied to an ob-ject with class at-tribute
[586] [587] [588] [589] [590] [591] [592] [593] [594]
Underfull \hbox (badness 3668) in paragraph at lines 38203--38205
[]\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di-
ately, even if
[595] [596]
Underfull \hbox (badness 2401) in paragraph at lines 38304--38308
[]\T1/ptm/m/n/10 See the de-scrip-tion of [][]\T1/zi4/m/n/10 options[][][]("war
n") \T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a
[597] [598] [599]
Underfull \hbox (badness 6542) in paragraph at lines 38481--38486
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 arr.ind == TRUE \T1/ptm/m/n/10 and \T1/zi4/m
/n/10 x \T1/ptm/m/n/10 is an [][]\T1/zi4/m/n/10 array[][][] \T1/ptm/m/n/10 (has
 a [][]\T1/zi4/m/n/10 dim[][][] \T1/ptm/m/n/10 at-tribute), the re-sult is
[600] [601] [602]
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[604] [605] [606]
Underfull \hbox (badness 10000) in paragraph at lines 38909--38914
[]\T1/ptm/m/n/10 This is a spe-cial case of rank-ing, but as a less gen-eral fu
nc-tion than [][]\T1/zi4/m/n/10 rank[][][]

Underfull \hbox (badness 10000) in paragraph at lines 38909--38914
\T1/ptm/m/n/10 is more suit-able to be made generic. The de-fault method is sim
-i-lar to
[607]
Underfull \hbox (badness 5417) in paragraph at lines 38999--39003
[]\T1/zi4/m/n/10 .packages() \T1/ptm/m/n/10 re-turns the names of the cur-rentl
y at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas
[608]
Underfull \hbox (badness 10000) in paragraph at lines 39060--39064
[]\T1/zi4/m/n/10 .standard_regexps \T1/ptm/m/n/10 re-turns a list of `stan-dard
' reg-exps, in-clud-ing el-e-ments named
[609] [610]) (./compiler-pkg.tex
Chapter 2.
[611] [612] [613] [614]) (./datasets-pkg.tex
Chapter 3.

Underfull \hbox (badness 10000) in paragraph at lines 12--14
[]\T1/ptm/m/n/10 This pack-age con-tains a va-ri-ety of datasets. For a com-ple
te list, use
[615] [616] [617] [618] [619] [620] [621] [622] [623] [624] [625] [626]
[627] [628] [629] [630] [631] [632] [633] [634] [635] [636] [637] [638]
[639] [640] [641] [642] [643] [644] [645] [646] [647] [648] [649] [650]
[651] [652] [653] [654] [655] [656] [657] [658] [659] [660] [661]
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[675] [676] [677] [678] [679] [680]
Underfull \hbox (badness 1325) in paragraph at lines 3873--3876
[]\T1/ptm/m/n/10 For back-ground on Bristle-cone pines and Methuse-lah Walk, se
e [][]$\T1/zi4/m/n/10 http : / / www . sonic . net /
[681]
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[683] [684] [685]
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Underfull \vbox (badness 10000) has occurred while \output is active [687]
[688] [689] [690] [691] [692] [693] [694]) (./grDevices-pkg.tex
Chapter 4.
[695] [696] [697] [698] [699] [700] [701] [702] [703] [704] [705] [706]
[707] [708] [709] [710] [711]
Underfull \hbox (badness 5175) in paragraph at lines 1048--1050
[]\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm
. The source code is in
[712] [713] [714]
Underfull \hbox (badness 1852) in paragraph at lines 1245--1248
[]\T1/zi4/m/n/10 densCols \T1/ptm/m/n/10 com-putes and re-turns the set of col-
ors that will be used in plot-ting, call-ing
[715] [716] [717]
Underfull \hbox (badness 1490) in paragraph at lines 1448--1453
\T1/ptm/m/n/10 by [][]\T1/zi4/m/n/10 rasterImage[][][] \T1/ptm/m/n/10 and [][]\
T1/zi4/m/n/10 grid.raster[][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues \T1/zi4/m/n/
10 "no"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "yes" \T1/ptm/m/n/10 and
[718]
Underfull \hbox (badness 2698) in paragraph at lines 1502--1505
[]\T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 if the de-vice does not sup-port cap-ture,
 oth-er-wise a ma-trix of color names (for
[719]
Underfull \hbox (badness 10000) in paragraph at lines 1571--1575
[]\T1/ptm/m/n/10 logical; if \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , the func-tion 
also re-turns \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/10 when
[720] [721] [722] [723] [724]
Underfull \hbox (badness 1033) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "pgnm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pgnmraw"\T1/ptm/m/n/10 , 
\T1/zi4/m/n/10 "pnm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pnmraw"\T1/ptm/m/n/10 , \T
1/zi4/m/n/10 "ppm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "ppmraw"\T1/ptm/m/n/10 , \T1/
zi4/m/n/10 "pkm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pkmraw"\T1/ptm/m/n/10 , \T1/zi
4/m/n/10 "tiffcrle"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3758) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "tiffg3"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "tiffg32d"\T1/ptm/m/n/10
 , \T1/zi4/m/n/10 "tiffg4"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "tifflzw"\T1/ptm/m/n/
10 , \T1/zi4/m/n/10 "tiffpack"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "tiff12nc"\T1/ptm
/m/n/10 , \T1/zi4/m/n/10 "tiff24nc"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3128) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "tiff32nc" "psmono"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "psgray"\T1/p
tm/m/n/10 , \T1/zi4/m/n/10 "psrgb"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "bit"\T1/ptm/
m/n/10 , \T1/zi4/m/n/10 "bitrgb"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "bitcmyk"\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 "pngmono"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 1546) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "pnggray"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pngalpha"\T1/ptm/m/n/1
0 , \T1/zi4/m/n/10 "png16"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "png256"\T1/ptm/m/n/1
0 , \T1/zi4/m/n/10 "png16m"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "png48"\T1/ptm/m/n/1
0 , \T1/zi4/m/n/10 "jpeg"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "jpeggray"\T1/ptm/m/n/
10 ,
[725]
Underfull \hbox (badness 10000) in paragraph at lines 1963--1965
[]\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the 
set-ting of
[726] [727] [728]
Underfull \hbox (badness 6758) in paragraph at lines 2115--2118
[]\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript
 doc-u-men-ta-tion) are
[729] [730] [731] [732] [733] [734] [735] [736]
Underfull \hbox (badness 10000) in paragraph at lines 2618--2619

[737] [738] [739] [740] [741] [742] [743]
Underfull \hbox (badness 1152) in paragraph at lines 3056--3058
[]\T1/ptm/m/n/10 A length two in-te-ger vec-tor \T1/zi4/m/n/10 nr, nc \T1/ptm/m
/n/10 giv-ing the num-ber of rows and columns, ful-fill-ing
[744] [745] [746] [747] [748]
Underfull \hbox (badness 2856) in paragraph at lines 3377--3380
[]\T1/ptm/m/n/10 For use with \T1/zi4/m/n/10 onefile = FALSE \T1/ptm/m/n/10 giv
e a C in-te-ger for-mat such as

Underfull \hbox (badness 2662) in paragraph at lines 3391--3393
[]\T1/ptm/m/n/10 title string to em-bed as the `\T1/zi4/m/n/10 /Title\T1/ptm/m/
n/10 ' field in the file. De-faults to
[749] [750]
Underfull \hbox (badness 1173) in paragraph at lines 3507--3517
[]\T1/ptm/m/n/10 The \T1/zi4/m/n/10 paper \T1/ptm/m/n/10 ar-gu-ment sets the `\
T1/zi4/m/n/10 /MediaBox\T1/ptm/m/n/10 ' en-try in the file, which de-faults to 
\T1/zi4/m/n/10 width \T1/ptm/m/n/10 by
[751] [752] [753] [754] [755] [756] [757]
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[759]
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[761]
Underfull \hbox (badness 1067) in paragraph at lines 4208--4215
\T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled
 with sup-
[762] [763] [764]
Underfull \hbox (badness 1789) in paragraph at lines 4430--4432
[]\T1/ptm/m/n/10 title string to em-bed as the \T1/zi4/m/n/10 Title \T1/ptm/m/n
/10 com-ment in the file. De-faults to
[765]
Underfull \hbox (badness 1377) in paragraph at lines 4480--4485
[]\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently 
al-lowed val-ues

Underfull \hbox (badness 2671) in paragraph at lines 4507--4515
\T1/ptm/m/n/10 For use in this way you will prob-a-bly want to use [][]\T1/zi4/
m/n/10 setEPS[][][]() \T1/ptm/m/n/10 to set the de-faults as
[766]
Underfull \hbox (badness 1418) in paragraph at lines 4556--4563
\T1/ptm/m/n/10 it is one of \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4
/m/n/10 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/
zi4/m/n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm
/m/n/10 ,

Underfull \hbox (badness 2443) in paragraph at lines 4564--4573
\T1/ptm/m/n/10 PostScript de-vice is us-ing URW fonts, you will ob-tain ac-cess
 to more char-ac-ters and

Underfull \hbox (badness 2653) in paragraph at lines 4564--4573
\T1/ptm/m/n/10 more ap-pro-pri-ate met-rics by us-ing these names. To make thes
e eas-ier to re-mem-ber,

Underfull \hbox (badness 1755) in paragraph at lines 4574--4576
[]\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East 
Asian lan-guages -- see
[767] [768]
Underfull \hbox (badness 1057) in paragraph at lines 4685--4690
[]\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are \
T1/zi4/m/n/10 "rgb"\T1/ptm/m/n/10 ) (which is RGB+gray) and

Underfull \hbox (badness 7344) in paragraph at lines 4745--4747
[]\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t
ion by Brian D'Urso
[769] [770] [771]
Underfull \hbox (badness 2035) in paragraph at lines 4869--4878
[]\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv
-a-lents) are also pro-

Underfull \hbox (badness 10000) in paragraph at lines 4869--4878
\T1/ptm/m/n/10 vided: \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/zi4/m/
n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm/m/n/1
0 ,

Underfull \hbox (badness 10000) in paragraph at lines 4869--4878
\T1/zi4/m/n/10 "NewCenturySchoolbook"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Palatino"
 \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "Times"\T1/ptm/m/n/10 ; \T1/zi4/m/n/10 "URWG
othic"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "URWBookman"\T1/ptm/m/n/10 ,
[772]
Underfull \hbox (badness 6775) in paragraph at lines 4936--4944
\T1/ptm/m/n/10 can be found at [][]$\T1/zi4/m/n/10 ftp : / / ftp . gnu . org / 
pub / non-[]gnu / chinese-[]fonts-[]truetype/$[][]\T1/ptm/m/n/10 . Ken

Underfull \hbox (badness 3000) in paragraph at lines 4936--4944
\T1/ptm/m/n/10 Lunde's CJKV re-sources are at [][]$\T1/zi4/m/n/10 ftp : / / ftp
 . oreilly . com / pub / examples / nutshell / cjkv /

Underfull \hbox (badness 7344) in paragraph at lines 4955--4957
[]\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t
ion by Brian D'Urso
[773] [774]
Underfull \hbox (badness 1546) in paragraph at lines 5075--5083
[]\T1/ptm/m/n/10 arguments \T1/zi4/m/n/10 onefile\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 family\T1/ptm/m/n/10 , \T1/zi4/m/n/10 title\T1/ptm/m/n/10 , \T1/zi4/m/n/10 fo
nts\T1/ptm/m/n/10 , \T1/zi4/m/n/10 encoding\T1/ptm/m/n/10 , \T1/zi4/m/n/10 bg\T
1/ptm/m/n/10 , \T1/zi4/m/n/10 fg\T1/ptm/m/n/10 , \T1/zi4/m/n/10 width\T1/ptm/m/
n/10 ,
[775]
Underfull \hbox (badness 1648) in paragraph at lines 5152--5156
[]\T1/ptm/m/n/10 title for the Quartz win-dow (ap-plies to on-screen out-put on
ly), de-fault
[776] [777] [778] [779] [780] [781] [782]
Underfull \hbox (badness 10000) in paragraph at lines 5569--5572
[]\T1/zi4/m/n/10 rgb2hsv \T1/ptm/m/n/10 trans-forms col-ors from RGB space (red
/green/blue) into HSV space
[783] [784] [785] [786] [787] [788] [789]
Underfull \hbox (badness 1189) in paragraph at lines 5965--5967
[]\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used
. One of
[790]
Underfull \hbox (badness 10000) in paragraph at lines 6063--6065
[]\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" \T1/ptm/m/n/10 for CJK 
lan-guages and
[791] [792] [793] [794] [795]
Underfull \hbox (badness 3780) in paragraph at lines 6354--6360
[]\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of \T1/zi4/m/n/1
0 "AvantGarde"\T1/ptm/m/n/10 ,
[796] [797]
Underfull \hbox (badness 2680) in paragraph at lines 6550--6552
[]\T1/ptm/m/n/10 multiplicities (pos-i-tive in-te-gers); i.e., \T1/zi4/m/n/10 n
umber[i] \T1/ptm/m/n/10 is the mul-ti-plic-ity of
[798] [799] [800]) (./graphics-pkg.tex
Chapter 5.
[801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811]
Underfull \hbox (badness 10000) in paragraph at lines 690--697
[]\T1/zi4/m/n/10 axTicks() \T1/ptm/m/n/10 can be used an \T1/phv/m/n/10 R \T1/p
tm/m/n/10 in-ter-face to the C func-tion \T1/zi4/m/n/10 CreateAtVector() \T1/pt
m/m/n/10 in
[812] [813] [814] [815] [816] [817] [818] [819] [820] [821]
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[][][]\T1/zi4/m/n/10 boxplot.default[][][] \T1/ptm/m/n/10 which al-ready works 
nowa-days with data.frames; [][]\T1/zi4/m/n/10 boxplot.formula[][][]\T1/ptm/m/n
/10 ,
[822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833]
[834] [835] [836] [837] [838]
Underfull \hbox (badness 1009) in paragraph at lines 2285--2292
\T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n
ot ap-ply to
[839] [840] [841] [842] [843] [844] [845] [846] [847] [848] [849] [850]
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Underfull \hbox (badness 1867) in paragraph at lines 3911--3915
[]\T1/ptm/m/n/10 vector of back-ground (fill) col-ors for the open plot sym-bol
s given by
[865] [866] [867] [868] [869] [870] [871] [872]
Underfull \hbox (badness 1924) in paragraph at lines 4362--4367
[]\T1/ptm/m/n/10 a func-tion which in-di-cates what should hap-pen when the dat
a con-tain
[873]
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[]\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are 
to be used: see
[874] [875] [876] [877]
Underfull \hbox (badness 10000) in paragraph at lines 4735--4741
[]\T1/ptm/b/it/10 R.O.\T1/ptm/m/n/10 ; size of de-fault char-ac-ter \T1/zi4/m/n
/10 (width, height) \T1/ptm/m/n/10 in user co-or-di-nate units.

Underfull \hbox (badness 5908) in paragraph at lines 4735--4741
\T1/zi4/m/n/10 par("cxy") \T1/ptm/m/n/10 is \T1/zi4/m/n/10 par("cin")/par("pin"
) \T1/ptm/m/n/10 scaled to user co-or-di-nates. Note that
[878] [879]
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[]\T1/ptm/m/n/10 The five stan-dard dash-dot line types (\T1/zi4/m/n/10 lty = 2
:6\T1/ptm/m/n/10 ) cor-re-spond to
[884] [885] [886] [887] [888]
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\T1/ptm/m/n/10 avoided (see the Warn-ings sec-tion be-low). Split-screen mode i
s ex-ited by the com-mand
[918] [919]
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[]\T1/ptm/m/n/10 For each \T1/zi4/m/n/10 i\T1/ptm/m/n/10 , a line seg-ment is d
rawn be-tween the point \T1/zi4/m/n/10 (x0[i], y0[i]) \T1/ptm/m/n/10 and the po
int
[920] [921] [922] [923] [924] [925] [926] [927] [928] [929] [930] [931]
[932] [933] [934] [935] [936] [937] [938] [939] [940]
Underfull \hbox (badness 6691) in paragraph at lines 8564--8567
[]\T1/ptm/m/n/10 The main ti-tle (on top) us-ing font and size (char-ac-ter ex-
pan-sion)

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[]\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font and size \T1/zi4/m/n/10 par
("font.sub") \T1/ptm/m/n/10 and color
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l.8649 \HeaderA{units}{Graphical Units}{units}
                                               [942] [943] [944] [945] [946])
(./grid-pkg.tex
Chapter 6.

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[]\T1/ptm/m/n/10 Note that \T1/zi4/m/n/10 preDrawDetails \T1/ptm/m/n/10 and \T1
/zi4/m/n/10 postDrawDetails \T1/ptm/m/n/10 are also called in the cal-cu-la-tio
n of
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[][][]\T1/ptm/m/n/10 Grid[][][], [][]\T1/zi4/m/n/10 pushViewport[][][]\T1/ptm/m
/n/10 , [][]\T1/zi4/m/n/10 popViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10
 downViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 seekViewport[][][]\T1/pt
m/m/n/10 , [][]\T1/zi4/m/n/10 upViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/
10 unit[][][]\T1/ptm/m/n/10 ,
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[]\T1/ptm/m/n/10 Both func-tions cre-ate an ar-rows grob (a graph-i-cal ob-ject
 de-scrib-ing ar-rows), but only
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[]\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec
t de-scrib-ing seg-ments), but only
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[]\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject
s are co-erced by
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\T1/ptm/m/n/10 and to spec-ify the min-i-mum or max-i-mum of a list of unit ob-
jects (e.g.,
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[]\T1/ptm/m/n/10 This can be use-ful for re-turn-ing to your start-ing point by
 do-ing some-thing like
[1054] [1055] [1056] [1057]) (./methods-pkg.tex [1058]
Chapter 7.
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[1070] [1071] [1072] [1073] [1074]
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[]\T1/ptm/m/n/10 The class \T1/zi4/m/n/10 "className" \T1/ptm/m/n/10 ex-tends \
T1/zi4/m/n/10 "character" \T1/ptm/m/n/10 and has a slot \T1/zi4/m/n/10 "package
"\T1/ptm/m/n/10 , also of class
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[]\T1/ptm/m/n/10 The ar-gu-ment to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/10 c
an be an ob-ject of class

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\T1/ptm/m/n/10 file name is passed to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/1
0 it calls \T1/zi4/m/n/10 evalSource \T1/ptm/m/n/10 to ob-tain the
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[]\T1/ptm/m/n/10 As you might ex-pect [][]\T1/zi4/m/n/10 setGeneric[][][] \T1/p
tm/m/n/10 and [][]\T1/zi4/m/n/10 setGroupGeneric[][][] \T1/ptm/m/n/10 cre-ate o
b-jects of class
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[]\T1/ptm/m/n/10 In \T1/zi4/m/n/10 getGenerics\T1/ptm/m/n/10 , if \T1/zi4/m/n/1
0 TRUE\T1/ptm/m/n/10 , the \T1/zi4/m/n/10 package \T1/ptm/m/n/10 slot of the re
-turned re-sult is in
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\T1/ptm/m/n/10 In ad-di-tion, \T1/zi4/m/n/10 removeGeneric \T1/ptm/m/n/10 re-mo
ves the func-tion it-self; \T1/zi4/m/n/10 removeMethods \T1/ptm/m/n/10 re-store
s the
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[]\T1/zi4/m/n/10 getPackageName \T1/ptm/m/n/10 re-turns the character-string na
me of the pack-age (with-out the ex-tra-ne-ous
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[]\T1/ptm/m/n/10 The \T1/zi4/m/n/10 initialize \T1/ptm/m/n/10 method for these 
classes takes spe-cial ar-gu-ments

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[]\T1/ptm/m/n/10 The
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[]\T1/ptm/m/n/10 The class \T1/zi4/m/n/10 "SealedMethodDefinition" \T1/ptm/m/n/
10 is cre-ated by a call to [][]\T1/zi4/m/n/10 setMethod[][][] \T1/ptm/m/n/10 w
ith ar-gu-ment

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[]\T1/ptm/m/n/10 class [][]\T1/zi4/m/n/10 MethodsList[][][] \T1/ptm/m/n/10 for 
the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar

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\T1/zi4/m/n/10 MethodDefinition\T1/ptm/m/n/10 , or an ex-ten-sion. Class [][]\T
1/zi4/m/n/10 MethodWithNext[][][] \T1/ptm/m/n/10 for an ex-ten-sion used by
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\T1/ptm/m/n/10 names cor-re-spond-ing to some or all of the for-mal ar-gu-ments
. In the pre-vi-ous ex-am-ple,

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\T1/ptm/m/n/10 if se-lect-ing class \T1/zi4/m/n/10 "track" \T1/ptm/m/n/10 for \
T1/zi4/m/n/10 x\T1/ptm/m/n/10 , find-ing that the se-lec-tion was an-other meth
-ods list and

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[]\T1/ptm/m/n/10 Object of class \T1/zi4/m/n/10 "PossibleMethod" \T1/ptm/m/n/10
 the method to use in re-sponse to a
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[]\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o
ds for this class are found (us-ing
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[]\T1/ptm/m/n/10 Two op-tional method names are in-ter-preted spe-cially, \T1/z
i4/m/n/10 initialize \T1/ptm/m/n/10 and
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                                                 [1158]
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[]\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic 
can be ob-tained by call-ing
[1159] [1160] [1161]
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[]\T1/ptm/m/n/10 for \T1/zi4/m/n/10 .selectSuperClasses() \T1/ptm/m/n/10 only, 
a [][]\T1/zi4/m/n/10 list[][][] \T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cal
ly
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[]\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance 
in R [][]$\T1/zi4/m/n/10 http : / / stat . stanford . edu / ~jmc4 /
[1195]
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[]\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl
ass, from the data part; e.g.,
[1196] [1197] [1198] [1199]) (./parallel-pkg.tex [1200]
Chapter 8.

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[]\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `\T1/zi4
/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"\T1/ptm/m/n/10 ' [][]RNG[
][][]: see
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[1212] [1213] [1214] [1215] [1216] [1217] [1218] [1219]
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[]\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by \T1/zi4/m/n/10 .R
andom.seed \T1/ptm/m/n/10 when the
[1220] [1221] [1222]) (./splines-pkg.tex
Chapter 9.

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[]\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 <bates@stat.wisc.edu> \T1/ptm/
m/n/10 and William N. Ven-ables
[1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233]
[1234] [1235] [1236] [1237]) (./stats-pkg.tex [1238]
Chapter 10.
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[1250] [1251]
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[]\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from \T1/zi4/m/n/10 lm 
\T1/ptm/m/n/10 or \T1/zi4/m/n/10 aov\T1/ptm/m/n/10 , or a for-mula for
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[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
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[]\T1/ptm/m/n/10 An ob-ject of class \T1/zi4/m/n/10 c("aov", "lm") \T1/ptm/m/n/
10 or for mul-ti-ple re-sponses of class
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[]\T1/ptm/m/n/10 the AIC value cor-re-spond-ing to the log-likelihood. Only val
id for
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[]\T1/ptm/m/n/10 the AIC value cor-re-spond-ing to the log-likelihood. Only val
id for
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[1290]
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[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
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[]\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 
(\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/
it/10 g[] \OT1/cmr/m/n/10 =
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[]\T1/ptm/m/n/10 Note that the usual def-i-ni-tion of con-vo-lu-tion of two se-
quences \T1/zi4/m/n/10 x \T1/ptm/m/n/10 and \T1/zi4/m/n/10 y \T1/ptm/m/n/10 is 
given by
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\T1/ptm/m/n/10 For \T1/zi4/m/n/10 cov()\T1/ptm/m/n/10 , a non-Pearson method is
 un-usual but avail-able for the sake of com-plete-ness.
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[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
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[]\T1/ptm/m/n/10 For Spear-man's test, p-values are com-puted us-ing al-go-rith
m AS 89 for $\OML/cmm/m/it/10 n < \OT1/cmr/m/n/10 1290$ \T1/ptm/m/n/10 and
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\T1/ptm/m/n/10 then \T1/zi4/m/n/10 y \T1/ptm/m/n/10 is a den-dro-gram of the sa
me graph struc-ture as \T1/zi4/m/n/10 x \T1/ptm/m/n/10 and for each node,
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[]\T1/ptm/m/n/10 Objects of class \T1/zi4/m/n/10 "hclust" \T1/ptm/m/n/10 can be
 con-verted to class \T1/zi4/m/n/10 "dendrogram" \T1/ptm/m/n/10 us-ing method

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[]\T1/zi4/m/n/10 rev.dendrogram \T1/ptm/m/n/10 sim-ply re-turns the den-dro-gra
m \T1/zi4/m/n/10 x \T1/ptm/m/n/10 with re-versed nodes, see also
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[]\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][]\T
1/zi4/m/n/10 dist[][][]()\T1/ptm/m/n/10 , the
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[]\T1/ptm/m/n/10 The CRAN task view on dis-tri-bu-tions, [][]$\T1/zi4/m/n/10 ht
tp : / / cran . r-[]project . org / web / views /
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[]\T1/ptm/m/n/10 Either \T1/zi4/m/n/10 "convolution" \T1/ptm/m/n/10 or \T1/zi4/
m/n/10 "recursive" \T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If
[1378]
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[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1379] [1380] [1381] [1382] [1383] [1384]
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[]\T1/ptm/m/n/10 the char-ac-ter string \T1/zi4/m/n/10 "Fligner-Killeen test of
 homogeneity of variances"\T1/ptm/m/n/10 . 
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[]\T1/ptm/m/n/10 See also [][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org /
 wiki / Incomplete _ gamma _ function$[][]\T1/ptm/m/n/10 , or [][]$\T1/zi4/m/n/
10 http : / / dlmf .
[1395] [1396] [1397] [1398]
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[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
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[]\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p
tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1
0 dev \OMS/cmsy/m/n/10 ^^@

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[]\T1/ptm/m/n/10 When \T1/zi4/m/n/10 trace \T1/ptm/m/n/10 is true, calls to [][
]\T1/zi4/m/n/10 cat[][][] \T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-
er-a-tion. Hence,
[1404]
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[]\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter-
na-tives are:
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[]\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these 
de-fault to
[1410]
Underfull \hbox (badness 1867) in paragraph at lines 10781--10790
\T1/ptm/m/n/10 in the row case. If ei-ther is miss-ing, as by de-fault, then th
e or-der-ing of the cor-re-
[1411] [1412] [1413] [1414] [1415] [1416] [1417]pdfTeX warning (ext4): destinat
ion with the same identifier (name{Rfn.hat}) has been already used, duplicate i
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<to be read again> 
                   \relax 
l.11228 \aliasA{hat}{influence.measures}{hat}
                                              [1418] [1419]
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[]\T1/ptm/m/n/10 The func-tion \T1/zi4/m/n/10 hat() \T1/ptm/m/n/10 ex-ists main
ly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing
[1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] [1428]
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[]\T1/ptm/m/n/10 vector of dif-fer-enc-ing co-ef-fi-cients, so an ARMA model is
 fit-ted to
[1429] [1430] [1431] [1432] [1433]
Underfull \hbox (badness 2894) in paragraph at lines 12196--12200
[]\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f
ault method
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[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
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[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
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[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
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[]\T1/zi4/m/n/10 model.offset \T1/ptm/m/n/10 and \T1/zi4/m/n/10 model.response 
\T1/ptm/m/n/10 are equiv-a-lent to \T1/zi4/m/n/10 model.extract(, "offset") \T1
/ptm/m/n/10 and
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[1507] [1508]
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[]\T1/ptm/m/n/10 Douglas M. Bates and Saikat De-bRoy: David M. Gay for the For-
tran code used by
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[]\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz
a-tion is per-formed on

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[]\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma
-tion to the gra-di-ent, on

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\T1/ptm/m/n/10 value by a fac-tor of \T1/zi4/m/n/10 reltol * (abs(val) + reltol
) \T1/ptm/m/n/10 at a step. De-faults to

Underfull \hbox (badness 2662) in paragraph at lines 17760--17764
[]\T1/ptm/m/n/10 The fre-quency of re-ports for the \T1/zi4/m/n/10 "BFGS"\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 "L-BFGS-B" \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "SANN" \
T1/ptm/m/n/10 meth-ods if
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[1528] [1529] [1530] [1531] [1532] [1533]
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[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544]
[1545] [1546]
Underfull \hbox (badness 5563) in paragraph at lines 19103--19105
[]\T1/ptm/m/n/10 logical. If \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , add to al-read
y ex-ist-ing plot. Only valid for

Underfull \hbox (badness 1194) in paragraph at lines 19106--19109
[]\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting
 of the con-fi-dence
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[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1553]
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[]\T1/ptm/m/n/10 the char-ac-ter string \T1/zi4/m/n/10 "Exact Poisson test" \T1
/ptm/m/n/10 or
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[1565] [1566] [1567] [1568]
Underfull \hbox (badness 10000) in paragraph at lines 20475--20481
[]\T1/ptm/m/n/10 For time-series pre-dic-tion, [][]\T1/zi4/m/n/10 predict.ar[][
][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 predict.Arima[][][]\T1/ptm/m/n/10 , [][]
\T1/zi4/m/n/10 predict.arima0[][][]\T1/ptm/m/n/10 ,
[1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] [1577] [1578] [1579]
[1580] [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] [1589] [1590]
[1591]
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[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602]
[1603]
Underfull \hbox (badness 10000) in paragraph at lines 22574--22577
[]\T1/ptm/m/n/10 Optional vec-tor with clus-ter mem-ber-ships as re-turned by
[1604] [1605] [1606] [1607] [1608] [1609] [1610] [1611] [1612] [1613]
Underfull \hbox (badness 10000) in paragraph at lines 23150--23153
[]\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult \T1/zi4/m/n/10 y = run
med(x, k) \T1/ptm/m/n/10 sim-ply has

Underfull \hbox (badness 3690) in paragraph at lines 23201--23205
[][][]\T1/zi4/m/n/10 smoothEnds[][][] \T1/ptm/m/n/10 which im-ple-ments Tukey's
 end point rule and is called by de-fault from
[1614] [1615] [1616] [1617] [1618]
Underfull \hbox (badness 7667) in paragraph at lines 23467--23469
[]\T1/ptm/m/n/10 a nu-meric vec-tor or an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-je
ct which is co-ercible to one by
[1619] [1620] [1621] [1622]
Underfull \hbox (badness 3439) in paragraph at lines 23676--23682
[][]\T1/zi4/m/n/10 SSasympOff[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSasympO
rig[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSbiexp[][][]\T1/ptm/m/n/10 , [][]
\T1/zi4/m/n/10 SSfol[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSfpl[][][]\T1/pt
m/m/n/10 , [][]\T1/zi4/m/n/10 SSgompertz[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/
10 SSlogis[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSmicmen[][][]\T1/ptm/m/n/1
0 ,
[1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633]
[1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] [1643] [1644]
[1645]
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Underfull \hbox (badness 3514) in paragraph at lines 25217--25222
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1647]
Underfull \hbox (badness 3514) in paragraph at lines 25279--25284
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1648]
Underfull \hbox (badness 3514) in paragraph at lines 25336--25341
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1649]
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[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1650] [1651] [1652] [1653]
Underfull \hbox (badness 3514) in paragraph at lines 25592--25597
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion

Underfull \hbox (badness 3514) in paragraph at lines 25648--25653
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1654]
Underfull \hbox (badness 3514) in paragraph at lines 25705--25710
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1655]
Underfull \hbox (badness 3514) in paragraph at lines 25760--25765
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1656] [1657]
Underfull \hbox (badness 6691) in paragraph at lines 25829--25834
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 x\T1/p
tm/m/n/10 . It is the value of the ex-pres-sion
[1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665]
Underfull \hbox (badness 10000) in paragraph at lines 26342--26345
[]\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-

Underfull \hbox (badness 10000) in paragraph at lines 26342--26345
\T1/ptm/m/n/10 trac-tion, which should be odd. If \T1/zi4/m/n/10 NULL\T1/ptm/m/
n/10 , the de-fault,
[1666] [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] [1675]
Underfull \hbox (badness 5431) in paragraph at lines 26948--26950
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1676] [1677] [1678] [1679]
Underfull \hbox (badness 5431) in paragraph at lines 27158--27161
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1680] [1681] [1682] [1683] [1684]
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[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1685] [1686]
Underfull \hbox (badness 10000) in paragraph at lines 27586--27589
[]\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/
10 ; cur-rently ex-cept for \T1/zi4/m/n/10 rt()\T1/ptm/m/n/10 , only for
[1687] [1688] [1689]
Underfull \hbox (badness 1616) in paragraph at lines 27769--27772
[]\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial
 resid-u-als, when
[1690] [1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700]
[1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711]
[1712]
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[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720]
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[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1721]
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[]\T1/ptm/m/n/10 an es-ti-mate of the lo-ca-tion pa-ram-e-ter. (Only present if
 ar-gu-ment
[1722] [1723] [1724] [1725] [1726] [1727]
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[]\T1/ptm/m/n/10 There is a \T1/zi4/m/n/10 summary \T1/ptm/m/n/10 method for co
n-tin-gency ta-ble ob-jects cre-ated by \T1/zi4/m/n/10 table \T1/ptm/m/n/10 or
[1728] [1729] [1730]) (./stats4-pkg.tex
Chapter 11.
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h the same identifier (name{Rfn.show.Rdash.methods}) has been already used, dup
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l.407 ...Package \pkg{stats4}}{show.Rdash.methods}
                                                   [1737] [1738] [1739]
[1740]) (./tcltk-pkg.tex
Chapter 12.
[1741] [1742] [1743] [1744] [1745] [1746] [1747]
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[]\T1/zi4/m/n/10 tcl \T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-ing
 any Tk or Tcl com-mand by sim-ply run-ning
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[][][]\T1/zi4/m/n/10 select.list[][][] \T1/ptm/m/n/10 (a text ver-sion ex-cept 
on Win-dows and the OS X GUI), [][]\T1/zi4/m/n/10 menu[][][] \T1/ptm/m/n/10 (wh
ose
[1761]) (./tools-pkg.tex [1762]
Chapter 13.
[1763]

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[1764]
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[]\T1/zi4/m/n/10 assertWarning() \T1/ptm/m/n/10 as-serts that a warn-ing will b
e sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas
[1765] [1766]
Underfull \hbox (badness 1308) in paragraph at lines 285--298
[]\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t
o ren-der each of the 12 types

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\T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][]\T1/zi4/m/n/10 bibe
ntry[][][] \T1/ptm/m/n/10 as well as sev-eral other rou-tines de-

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\T1/zi4/m/n/10 formatIncollection\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatInProcee
dings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatManual\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 formatMastersthesis\T1/ptm/m/n/10 ,

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\T1/zi4/m/n/10 formatMisc\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatPhdthesis\T1/ptm
/m/n/10 , \T1/zi4/m/n/10 formatProceedings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 forma
tTechreport \T1/ptm/m/n/10 and
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Underfull \hbox (badness 2080) in paragraph at lines 449--454
\T1/ptm/m/n/10 ac-ters. It is sorted by Uni-code point and within a point al-ph
a-bet-i-cally on the glyph

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\T1/ptm/m/n/10 (there can be more than one name for a Uni-code point). The data
 are in the file
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[]\T1/ptm/m/n/10 Delete files in the tem-po-rary di-rec-tory? This op-tion is i
g-nored when
[1779]
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\T1/ptm/m/n/10 giv-ing the repos-i-to-ries to use for lo-cat-ing re-verse de-pe
n-den-cies (de-

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[]\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v
erse de-pen-den-cies
[1780]
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[]\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing


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\T1/zi4/m/n/10 summarize_check_packages_in_dir_results \T1/ptm/m/n/10 and \T1/z
i4/m/n/10 summarize_check_packages_in_dir_timings\T1/ptm/m/n/10 ,
[1781] [1782]
Underfull \hbox (badness 10000) in paragraph at lines 1207--1209
[]\T1/ptm/m/n/10 Re-save PDF files (es-pe-cially vi-gnettes) more com-pactly. S
up-port func-tion for
[1783] [1784]
Underfull \hbox (badness 7981) in paragraph at lines 1378--1382
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
 sub-set of
[1785]
Underfull \hbox (badness 1082) in paragraph at lines 1384--1386
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br
ary trees, or \T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 for all known trees (see
[1786] [1787] [1788] [1789]
Underfull \hbox (badness 5726) in paragraph at lines 1651--1656
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 reduce \T1/ptm/m/n/10 is \T1/zi4/m/n/10 TRUE
\T1/ptm/m/n/10 , the sys-tem will col-lapse the fields in the \T1/zi4/m/n/10 De
pendsList \T1/ptm/m/n/10 ob-ject

Underfull \hbox (badness 7221) in paragraph at lines 1651--1656
\T1/ptm/m/n/10 such that a min-i-mal set of de-pen-den-cies are spec-i-fied (fo
r in-stance if there was
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Underfull \hbox (badness 7981) in paragraph at lines 2025--2031
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
 sub-set of
[1797] [1798] [1799] [1800]

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[]\T1/zi4/m/sl/10 NULL \T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec-t
or of links, as re-turned by
[1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812]
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[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing how the news en-tries shoul
d be \T1/ptm/m/it/10 chopped\T1/ptm/m/n/10 ;
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[]\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p
o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists.
 The

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\T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in 
the pack-age are ex-am-ined to cre-ate a file
[1822] [1823]
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[]\T1/ptm/m/n/10 If \T1/zi4/m/sl/10 reduce \T1/ptm/m/n/10 is \T1/zi4/m/sl/10 TR
UE\T1/ptm/m/n/10 , the sys-tem will col-lapse the fields in the \T1/zi4/m/sl/10
 DependsList \T1/ptm/m/n/10 ob-ject

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\T1/ptm/m/n/10 such that a min-i-mal set of de-pen-den-cies are spec-i-fied (fo
r in-stance if there was
[1824] [1825]
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[]\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to be used in the `\T
1/zi4/m/sl/10 PACKAGES\T1/ptm/m/n/10 ' and
[1826] [1827] [1828] [1829]) (./utils-pkg.tex [1830]
Chapter 14.
[1831]
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[]\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `\T
1/zi4/m/sl/10 insertions\T1/ptm/m/n/10 ',
[1832] [1833]
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[]\T1/ptm/m/n/10 logical in-di-cat-ing if the search should be case-insensitive
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[]\T1/zi4/m/sl/10 find \T1/ptm/m/n/10 is a dif-fer-ent user in-ter-face for the
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[]\T1/ptm/m/n/10 Functions \T1/zi4/m/sl/10 aspell_package_Rd_files\T1/ptm/m/n/1
0 , \T1/zi4/m/sl/10 aspell_package_vignettes\T1/ptm/m/n/10 ,

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\T1/zi4/m/sl/10 aspell_package_R_files \T1/ptm/m/n/10 and \T1/zi4/m/sl/10 aspel
l_package_C_files \T1/ptm/m/n/10 per-form spell check-ing on the
[1840]
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[]\T1/ptm/m/n/10 Argument \T1/zi4/m/sl/10 filters \T1/ptm/m/n/10 can be used to
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\T1/ptm/m/n/10 ries are re-ported. It is called with its de-fault value (\T1/zi
4/m/sl/10 NULL\T1/ptm/m/n/10 ) by func-tions such as
[1841]
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[]\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields \T1/zi4/m/sl/10 "O
S_type"\T1/ptm/m/n/10 , \T1/zi4/m/sl/10 "License"\T1/ptm/m/n/10 , \T1/zi4/m/sl/
10 "License_is_FOSS"\T1/ptm/m/n/10 ,
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[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/sl/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/sl/10 ccaddress \T1/ptm/m/n/10 to pass to
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[]\T1/ptm/m/n/10 None for \T1/zi4/m/sl/10 chooseCRANmirror()\T1/ptm/m/n/10 , th
is func-tion is in-voked for its side ef-fect of up-dat-ing
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[]\T1/ptm/m/n/10 A list of keys that have been pre-vi-ously cited, to be used w
hen
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[]\T1/ptm/m/n/10 logical in-di-cat-ing if the re-sult should be sim-pli-fied to
 an [][]\T1/zi4/m/sl/10 array[][][] \T1/ptm/m/n/10 (typ-i-

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[]\T1/ptm/m/n/10 a [][]\T1/zi4/m/sl/10 list[][][] \T1/ptm/m/n/10 or [][]\T1/zi4
/m/sl/10 array[][][]\T1/ptm/m/n/10 , see the \T1/zi4/m/sl/10 simplify \T1/ptm/m
/n/10 ar-gu-ment above. In the lat-ter case, the iden-tity
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[1873] [1874] [1875] [1876]
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[]\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by
 the \T1/zi4/m/sl/10 quiet \T1/ptm/m/n/10 ar-gu-ment and the

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\T1/zi4/m/sl/10 internet.info \T1/ptm/m/n/10 op-tion. The de-tails de-pend on t
he plat-form and scheme, but set-ting
[1877]
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[]\T1/ptm/m/n/10 Usernames and pass-words can be set for HTTP proxy trans-fers 
via en-vi-ron-ment vari-able
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[1889]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.for
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[1904]
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[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/sl/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/sl/10 ccaddress \T1/ptm/m/n/10 to pass to
[1905]
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[]\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words
'. `Key-

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\T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are 
listed in file
[1906] [1907] [1908]
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[]\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de
x,
[1909] [1910]
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[]\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion `
Lock-ing' in the help for
[1911]
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[]\T1/ptm/m/n/10 If \T1/zi4/m/sl/10 repos = NULL\T1/ptm/m/n/10 , a char-ac-ter 
vec-tor of file paths of `\T1/zi4/m/sl/10 .tar.gz\T1/ptm/m/n/10 ' files.
[1912]
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[]\T1/ptm/m/n/10 logical in-di-cat-ing to also in-stall unin-stalled pack-ages 
which these pack-

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\T1/ptm/m/n/10 ages de-pend on/link to/import/suggest (and so on re-cur-sively)
. Not

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\T1/ptm/m/n/10 used if \T1/zi4/m/sl/10 repos = NULL\T1/ptm/m/n/10 . Can also be
 a char-ac-ter vec-tor, a sub-set of

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[]\T1/ptm/m/n/10 (not used on Win-dows) anal-o-gous to \T1/zi4/m/sl/10 configur
e.args \T1/ptm/m/n/10 for flag
[1913]
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[]\T1/ptm/m/n/10 an op-tional char-ac-ter vec-tor of ad-di-tional op-tion(s) to
 be passed

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\T1/ptm/m/n/10 to \T1/zi4/m/sl/10 R CMD INSTALL \T1/ptm/m/n/10 for a source pac
k-age in-stall. E.g.,
[1914]
Underfull \hbox (badness 10000) in paragraph at lines 5375--5380
[][][]\T1/zi4/m/sl/10 update.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10
 available.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 download.packages
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 installed.packages[][][]\T1/ptm/m/n/
10 ,
[1915] [1916] [1917] [1918] [1919] [1920] [1921] [1922] [1923] [1924] [1925]
[1926] [1927] [1928] [1929] [1930] [1931] [1932] [1933]
Underfull \hbox (badness 10000) in paragraph at lines 6529--6531
[]\T1/zi4/m/sl/10 packageVersion() \T1/ptm/m/n/10 is a con-ve-nience short-cut,
 al-low-ing things like

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[]\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the
 given pack-age is found and can suc-cess-fully be read,
[1934] [1935] [1936]
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[]\T1/ptm/m/n/10 a data frame with columns as the \T1/ptm/m/it/10 ma-trix \T1/p
tm/m/n/10 re-turned by

Underfull \hbox (badness 10000) in paragraph at lines 6691--6694
[][]\T1/zi4/m/sl/10 available.packages[][][] \T1/ptm/m/n/10 plus \T1/zi4/m/sl/1
0 "Status"\T1/ptm/m/n/10 , a fac-tor with lev-els
[1937] [1938] [1939] [1940] [1941] [1942]
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[]\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for
 more dis-cus-sion of the
[1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953]
[1954]
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[]\T1/ptm/m/n/10 The name \T1/zi4/m/sl/10 "clipboard" \T1/ptm/m/n/10 may also b
e used on Win-dows, in which case
[1955] [1956]
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[][][]\T1/zi4/m/sl/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/sl/10 read.t
able[][][]\T1/ptm/m/n/10 ;
[1957] [1958] [1959] [1960] [1961] [1962] [1963] [1964]
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[][][]\T1/zi4/m/sl/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/sl/10 write.
table[][][]\T1/ptm/m/n/10 ;
[1965] [1966] [1967] [1968] [1969] [1970] [1971] [1972] [1973] [1974] [1975]
[1976] [1977] [1978] [1979] [1980]
Underfull \hbox (badness 10000) in paragraph at lines 9504--9506
[][][]$\T1/zi4/m/sl/10 http : / / en . wikipedia . org / wiki / Ctags$[][]\T1/p
tm/m/n/10 , [][]$\T1/zi4/m/sl/10 http : / / www . gnu . org / software / emacs 
/
[1981] [1982]
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[]\T1/ptm/m/n/10 The de-fault for \T1/zi4/m/sl/10 stylepath \T1/ptm/m/n/10 is n
ow taken from the en-vi-ron-ment vari-able
[1983]
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[]\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y
ou can add a
[1984]
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[]\T1/ptm/m/n/10 logical (\T1/zi4/m/sl/10 FALSE\T1/ptm/m/n/10 ), in-di-cat-ing 
whether PNG fig-ures should be gen-er-ated. Ig-nored if

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[]\T1/ptm/m/n/10 logical (\T1/zi4/m/sl/10 FALSE\T1/ptm/m/n/10 ), in-di-cat-ing 
whether JPEG fig-ures should be gen-er-ated. Ig-nored if
[1985]
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[]\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func-
tions can be ex-e-cuted. If
[1986] [1987] [1988] [1989] [1990]
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[]\T1/ptm/m/n/10 Repository `\T1/zi4/m/sl/10 CRAN\T1/ptm/m/n/10 ' is treated sp
e-cially: the value is taken from the cur-rent set-ting of
[1991] [1992] [1993] [1994] [1995] [1996]
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[]\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t
ive

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[]\T1/ptm/m/n/10 string in-di-cat-ing if the \T1/zi4/m/sl/10 width \T1/ptm/m/n/
10 ar-gu-ment's spec-i-fi-ca-tion should be fol-

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\T1/ptm/m/n/10 lowed strictly, one of the val-ues \T1/zi4/m/sl/10 c("no", "cut"
, "wrap")\T1/ptm/m/n/10 . De-

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\T1/ptm/m/n/10 faults to the \T1/zi4/m/sl/10 strict.width \T1/ptm/m/n/10 com-po
-nent of op-tion \T1/zi4/m/sl/10 "str" \T1/ptm/m/n/10 (see [][]\T1/zi4/m/sl/10 
options[][][]\T1/ptm/m/n/10 )

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\T1/ptm/m/n/10 which de-faults to \T1/zi4/m/sl/10 "no" \T1/ptm/m/n/10 for back 
com-pat-i-bil-ity rea-sons; \T1/zi4/m/sl/10 "wrap" \T1/ptm/m/n/10 uses
[1997] [1998] [1999]
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[]\T1/ptm/m/n/10 Options other than \T1/zi4/m/sl/10 memory = "none" \T1/ptm/m/n
/10 ap-ply only to files pro-duced by
[2000] [2001] [2002] [2003] [2004] [2005]
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[][][]$\T1/zi4/m/sl/10 http : / / en . wikipedia . org / wiki / Tar _ (file _ f
ormat)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 http : / / pubs . opengroup . 
org /

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\T1/zi4/m/sl/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9
2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX
[2006] [2007] [2008] [2009] [2010] [2011] [2012] [2013]
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[]\T1/ptm/m/n/10 Arguments such as \T1/zi4/m/sl/10 destdir \T1/ptm/m/n/10 and \
T1/zi4/m/sl/10 dependencies \T1/ptm/m/n/10 to be passed to
[2014]
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[]\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and
 in-stall. See

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[]\T1/ptm/m/n/10 For how the list of suit-able avail-able pack-ages is de-ter-m
ined see

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[][]\T1/zi4/m/sl/10 available.packages[][][]\T1/ptm/m/n/10 . \T1/zi4/m/sl/10 av
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[][][]\T1/zi4/m/sl/10 install.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/1
0 available.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 download.package
s[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 installed.packages[][][]\T1/ptm/m/n
/10 ,
[2015] [2016] [2017] [2018] [2019] [2020]
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[]\T1/ptm/m/n/10 the char-ac-ter(s) to print at the end of each line (row). For
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[2021]
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[]\T1/ptm/m/n/10 To write a Unix-style file on Win-dows, use a bi-nary con-nec-
tion e.g.
[2022] [2023] [2024])
No file fullrefman.ind.
(./fullrefman.aux)

Package rerunfilecheck Warning: File `fullrefman.out' has changed.
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(/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd) [1] [2] [3]
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Chapter 1.

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[]\T1/ptm/m/n/10 logical, in-di-cat-ing if an `x[i]' equal to the low-est (or h
igh-est, for
[1] [2]
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[]\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber \T1/zi4/m/n/10 x \T1
/ptm/m/n/10 such that \T1/zi4/m/n/10 1 - x != 1\T1/ptm/m/n/10 .

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\T1/ptm/m/n/10 It equals \T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits \T1
/ptm/m/n/10 if

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\T1/zi4/m/n/10 double.base \T1/ptm/m/n/10 is 2 or \T1/zi4/m/n/10 double.roundin
g \T1/ptm/m/n/10 is 0; oth-er-wise, it is

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[]\T1/ptm/m/n/10 the largest nor-mal-ized floating-point num-ber. Typ-i-cally, 
it is equal to
[3] [4] [5]
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[]\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][]\T1/zi4/m/n/
10 options[][][]("pkgType")\T1/ptm/m/n/10 . Val-ues
[6]
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[]\T1/ptm/m/n/10 logical: should \T1/zi4/m/n/10 minlength \T1/ptm/m/n/10 be ob-
served strictly? Note that set-ting
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[]\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `\T
1/zi4/m/n/10 insertions\T1/ptm/m/n/10 ',
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[]\T1/ptm/m/n/10 If the calls to \T1/zi4/m/n/10 FUN \T1/ptm/m/n/10 re-turn vec-
tors of dif-fer-ent lengths, \T1/zi4/m/n/10 apply \T1/ptm/m/n/10 re-turns a lis
t of length
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[]\T1/zi4/m/n/10 %% \T1/ptm/m/n/10 in-di-cates \T1/zi4/m/n/10 x mod y \T1/ptm/m
/n/10 and \T1/zi4/m/n/10 %/% \T1/ptm/m/n/10 in-di-cates in-te-ger di-vi-sion. I
t is guar-an-teed that
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[]\T1/ptm/m/n/10 a date-time ob-ject, or some-thing which can be co-erced by
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[47]
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[]\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim
-ited by set-ting
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[]\T1/ptm/m/n/10 is there sup-port the [][]\T1/zi4/m/n/10 svg[][][]\T1/ptm/m/n/
10 , [][]\T1/zi4/m/n/10 cairo_pdf[][][] \T1/ptm/m/n/10 and [][]\T1/zi4/m/n/10 c
airo_ps[][][] \T1/ptm/m/n/10 de-vices, and for
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[]\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c
har-ac-ter by
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[88] [89] [90] [91]
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[]\T1/ptm/m/n/10 New restarts for \T1/zi4/m/n/10 withRestarts \T1/ptm/m/n/10 ca
n be spec-i-fied in sev-eral ways. The sim-plest is in
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[]\T1/ptm/m/n/10 A note on `\T1/zi4/m/n/10 file://\T1/ptm/m/n/10 ' URLs. The mo
st gen-eral form (from RFC1738) is
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\T1/zi4/m/n/10 txt$[][]\T1/ptm/m/n/10 ), which can also be spec-i-fied as \T1/z
i4/m/n/10 "X11_primary" \T1/ptm/m/n/10 and the sec-ondary se-lec-tion as
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[]\T1/ptm/m/n/10 logical, in-di-cat-ing if an `x[i]' equal to the low-est (or h
igh-est, for
[109]
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[][][]\T1/zi4/m/n/10 split[][][] \T1/ptm/m/n/10 for split-ting a vari-able ac-c
ord-ing to a group fac-tor; [][]\T1/zi4/m/n/10 factor[][][]\T1/ptm/m/n/10 , [][
]\T1/zi4/m/n/10 tabulate[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 table[][][]\T
1/ptm/m/n/10 ,
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[]\T1/zi4/m/n/10 data.frame \T1/ptm/m/n/10 con-verts each of its ar-gu-ments to
 a data frame by call-ing
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[][][]\T1/zi4/m/n/10 I[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 plot.data.frame
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 print.data.frame[][][]\T1/ptm/m/n/10 
, [][]\T1/zi4/m/n/10 row.names[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 names[]
[][] \T1/ptm/m/n/10 (for the col-umn names),

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[][]\T1/zi4/m/n/10 [.data.frame[][][] \T1/ptm/m/n/10 for sub-set-ting meth-ods,
 [][]\T1/zi4/m/n/10 Math.data.frame[][][] \T1/ptm/m/n/10 etc, about \T1/ptm/m/i
t/10 Group \T1/ptm/m/n/10 meth-ods for
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[]\T1/ptm/m/n/10 Subtraction of date-time ob-jects gives an ob-ject of this cla
ss, by call-ing \T1/zi4/m/n/10 difftime \T1/ptm/m/n/10 with
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[][][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki / IEEE _ 754-[]198
5$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wi
ki / IEEE _
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[]\T1/ptm/m/n/10 logical in-di-cat-ing if du-pli-ca-tion should be con-sid-ered
 from the re-verse

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[]\T1/ptm/m/n/10 For the de-fault meth-ods, and when-ever there are equiv-a-len
t method def-i-ni-tions for

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[]\T1/ptm/m/n/10 Except for fac-tors, log-i-cal and raw vec-tors the de-fault \
T1/zi4/m/n/10 nmax = NA \T1/ptm/m/n/10 is equiv-a-lent to
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[]\T1/ptm/m/n/10 When eval-u-at-ing ex-pres-sions in a data frame that has been
 passed as an ar-gu-ment

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\T1/ptm/m/n/10 to a func-tion, the rel-e-vant en-clo-sure is of-ten the caller'
s en-vi-ron-ment, i.e., one needs
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[]\T1/ptm/m/n/10 Both \T1/zi4/m/n/10 $ \T1/ptm/m/n/10 and \T1/zi4/m/n/10 [[ \T1
/ptm/m/n/10 can be ap-plied to en-vi-ron-ments. Only char-ac-ter in-dices are a
l-lowed

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\T1/ptm/m/n/10 and no par-tial match-ing is done. The se-man-tics of these op-e
r-a-tions are those of
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[]\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is
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[][][]\T1/zi4/m/n/10 Sys.readlink[][][] \T1/ptm/m/n/10 to find out about sym-bo
lic links, [][]\T1/zi4/m/n/10 files[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 fi
le.access[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files[][][]\T1/ptm/m/n/
10 , and
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[]\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as \T1/zi4/m
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[194]
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[][][]\T1/zi4/m/n/10 file.info[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.ac
cess[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.path[][][]\T1/ptm/m/n/10 , [
][]\T1/zi4/m/n/10 file.show[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 unlink[][][]\T1/ptm/m/n/10 , [][]\T1/
zi4/m/n/10 basename[][][]\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 12526--12529
[][][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki / Hard _ link$[][]
 \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki 
/
[195] [196] [197] [198]
Underfull \hbox (badness 3965) in paragraph at lines 12773--12777
[]\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr
i-bu-tion func-tion, and in-deed,
[199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209]
Underfull \hbox (badness 4429) in paragraph at lines 13481--13484
[]\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][]
\T1/zi4/m/n/10 complex[][][] \T1/ptm/m/n/10 only for
[210]
Underfull \hbox (badness 10000) in paragraph at lines 13567--13569
[]\T1/ptm/m/n/10 If you set \T1/zi4/m/n/10 format \T1/ptm/m/n/10 it over-rides 
the set-ting of \T1/zi4/m/n/10 mode\T1/ptm/m/n/10 , so

Underfull \hbox (badness 10000) in paragraph at lines 13573--13577
[]\T1/zi4/m/n/10 formatC \T1/ptm/m/n/10 does not nec-es-sar-ily align the num-b
ers on the dec-i-mal point, so
[211] [212]
Underfull \vbox (badness 3803) has occurred while \output is active [213]
[214] [215] [216] [217] [218] [219] [220] [221] [222] [223]
Underfull \hbox (badness 1092) in paragraph at lines 14330--14335
[][]\T1/zi4/m/n/10 library.dynam[][][]\T1/ptm/m/n/10 , or can be found af-ter t
he DLL has been loaded us-ing
[224] [225] [226] [227]
Underfull \hbox (badness 6741) in paragraph at lines 14578--14582
\T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing \
T1/zi4/m/n/10 CRoutine\T1/ptm/m/n/10 , \T1/zi4/m/n/10 CallRoutine\T1/ptm/m/n/10
 ,
[228] [229] [230] [231]
Underfull \hbox (badness 1867) in paragraph at lines 14876--14883
[]\T1/ptm/m/n/10 character string con-tain-ing a [][]reg-u-lar ex-pres-sion[][]
[] (or char-ac-ter string for
[232] [233] [234] [235]
Underfull \vbox (badness 10000) has occurred while \output is active [236]
[237]
Underfull \hbox (badness 3679) in paragraph at lines 15240--15242
[]\T1/ptm/m/n/10 The TRE li-brary of Ville Lau-rikari ([][]$\T1/zi4/m/n/10 http
 : / / laurikari . net / tre/$[][]\T1/ptm/m/n/10 ) is used ex-cept for
[238] [239] [240] [241] [242] [243]
Underfull \hbox (badness 1478) in paragraph at lines 15708--15711
[]\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha
r-ac-ter vec-tor
[244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254]
Underfull \hbox (badness 1442) in paragraph at lines 16391--16393
[]\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed 
and by [][]\T1/zi4/m/n/10 dev.new[][][]\T1/ptm/m/n/10 : see
[255]
Underfull \hbox (badness 2452) in paragraph at lines 16483--16499
[][][]\T1/zi4/m/n/10 as.character[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.c
omplex[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.double[][][]\T1/ptm/m/n/10 ,
 [][]\T1/zi4/m/n/10 as.integer[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.logi
cal[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.raw[][][]\T1/ptm/m/n/10 , [][]\
T1/zi4/m/n/10 as.vector[][][]\T1/ptm/m/n/10 ,
[256] [257] [258] [259] [260] [261] [262] [263] [264] [265] [266]
Underfull \hbox (badness 4739) in paragraph at lines 17130--17132
[]\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere
d, see
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[279] [280]
Underfull \hbox (badness 10000) in paragraph at lines 18012--18016
[]\T1/ptm/m/n/10 By de-fault \T1/zi4/m/n/10 R_LIBS \T1/ptm/m/n/10 is un-set, an
d \T1/zi4/m/n/10 R_LIBS_USER \T1/ptm/m/n/10 is set to di-rec-tory

Underfull \hbox (badness 2460) in paragraph at lines 18012--18016
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 R/\T1/ptm/m/sl/10 R.version$platform\T1/zi4/m/n/
10 -library/\T1/ptm/m/sl/10 x.y\T1/ptm/m/n/10 ' of the home di-rec-tory (or `\T
1/zi4/m/n/10 Library/R/\T1/ptm/m/sl/10 x.y\T1/zi4/m/n/10 /library\T1/ptm/m/n/10
 '
[281] [282]
Underfull \hbox (badness 1014) in paragraph at lines 18165--18170
[]\T1/ptm/m/n/10 Normally \T1/zi4/m/n/10 library \T1/ptm/m/n/10 re-turns (in-vi
s-i-bly) the list of at-tached pack-ages, but \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/1
0 or \T1/zi4/m/n/10 FALSE \T1/ptm/m/n/10 if
[283] [284] [285] [286] [287] [288] [289] [290] [291] [292] [293]
Underfull \hbox (badness 1264) in paragraph at lines 18872--18877
[]\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways 
be sup-ported:
[294] [295] [296] [297] [298] [299] [300] [301] [302] [303] [304] [305]
Underfull \hbox (badness 10000) in paragraph at lines 19606--19608
[]\T1/ptm/m/n/10 The al-go-rithm used by \T1/zi4/m/n/10 make.unique \T1/ptm/m/n
/10 has the prop-erty that
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[318] [319] [320] [321]
Underfull \hbox (badness 1655) in paragraph at lines 20594--20600
[][][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki / Data _ compressi
on$[][] \T1/ptm/m/n/10 for back-ground on data com-pres-sion,
[322] [323]
Underfull \hbox (badness 1484) in paragraph at lines 20755--20763
[]\T1/ptm/m/n/10 The address-space limit is 2Gb un-der 32-bit Win-dows un-less 
the OS's de-fault has been
[324] [325] [326] [327] [328]
Underfull \hbox (badness 2790) in paragraph at lines 21022--21025
[]\T1/zi4/m/n/10 packageStartupMessage \T1/ptm/m/n/10 is a vari-ant whose mes-s
ages can be sup-pressed sep-a-rately by

Underfull \hbox (badness 1571) in paragraph at lines 21022--21025
\T1/zi4/m/n/10 suppressPackageStartupMessages\T1/ptm/m/n/10 . (They are still m
es-sages, so can be sup-pressed by
[329] [330] [331] [332] [333] [334]
Underfull \hbox (badness 10000) in paragraph at lines 21461--21464
[]\T1/ptm/m/n/10 It is pos-si-ble to up-date just part of the names at-tribute 
via the gen-eral rules:

Underfull \hbox (badness 10000) in paragraph at lines 21461--21464
\T1/ptm/m/n/10 see the ex-am-ples. This works be-cause the ex-pres-sion there i
s eval-u-ated as
[335] [336] [337] [338] [339] [340] [341] [342] [343] [344] [345] [346]
[347] [348] [349] [350] [351]
Underfull \hbox (badness 1199) in paragraph at lines 22508--22514
[]\T1/ptm/m/n/10 The de-fault method for \T1/zi4/m/n/10 is.numeric \T1/ptm/m/n/
10 re-turns \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/10 if its ar-gu-ment is of [][]mode
[][][] \T1/zi4/m/n/10 "numeric"

Underfull \hbox (badness 2027) in paragraph at lines 22508--22514
\T1/ptm/m/n/10 ([][]type[][][] \T1/zi4/m/n/10 "double" \T1/ptm/m/n/10 or type \
T1/zi4/m/n/10 "integer"\T1/ptm/m/n/10 ) and not a fac-tor, and \T1/zi4/m/n/10 F
ALSE \T1/ptm/m/n/10 oth-er-wise. That is,
[352] [353] [354] [355] [356] [357] [358] [359]
Underfull \hbox (badness 1038) in paragraph at lines 23037--23046
[]\T1/ptm/m/n/10 the pack-ages that are at-tached by de-fault when \T1/phv/m/n/
10 R \T1/ptm/m/n/10 starts up. Ini-tially

Underfull \hbox (badness 1881) in paragraph at lines 23047--23050
[]\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str
ucts which are

Underfull \hbox (badness 6220) in paragraph at lines 23066--23068
[]\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see

[360]
Underfull \hbox (badness 10000) in paragraph at lines 23130--23139
[]\T1/ptm/m/n/10 the com-mand used for dis-play-ing text files by [][]\T1/zi4/m
/n/10 file.show[][][]\T1/ptm/m/n/10 . De-faults to

Underfull \hbox (badness 2600) in paragraph at lines 23130--23139
\T1/ptm/m/n/10 `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /bin/pager\T1/pt
m/m/n/10 ', which se-lects a pager via the \T1/zi4/m/n/10 PAGER \T1/ptm/m/n/10 
en-vi-ron-ment vari-able

Underfull \hbox (badness 2142) in paragraph at lines 23140--23146
[]\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][]\T1/zi4/m/n/10 postscr
ipt[][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able

Underfull \hbox (badness 1968) in paragraph at lines 23153--23158
[]\T1/ptm/m/n/10 the com-mand used by [][]\T1/zi4/m/n/10 postscript[][][] \T1/p
tm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able

Underfull \hbox (badness 10000) in paragraph at lines 23163--23172
[]\T1/ptm/m/n/10 Used for the readline-based ter-mi-nal in-ter-face. De-fault v
alue
[361] [362] [363]
Underfull \hbox (badness 10000) in paragraph at lines 23404--23410
[]\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][]\T1/zi4/m/
n/10 setRepositories[][][]\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 23404--23410
\T1/ptm/m/n/10 e.g. the de-fault `\T1/zi4/m/n/10 "http://www.bioconductor.org"\
T1/ptm/m/n/10 ' or the Eu-ro-pean mir-

Underfull \hbox (badness 10000) in paragraph at lines 23404--23410
\T1/ptm/m/n/10 ror `\T1/zi4/m/n/10 "http://bioconductor.statistik.tu-dortmund.d
e"\T1/ptm/m/n/10 '. Can be set by

Underfull \hbox (badness 10000) in paragraph at lines 23416--23419
[]\T1/ptm/m/n/10 default Cc: ad-dress used by [][]\T1/zi4/m/n/10 create.post[][
][] \T1/ptm/m/n/10 (and hence[][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/n/10
 and

Underfull \hbox (badness 2689) in paragraph at lines 23441--23443
[]\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na
l HTTP server, see
[364]
Underfull \hbox (badness 7203) in paragraph at lines 23469--23472
[]\T1/ptm/m/n/10 default email-ing method used by [][]\T1/zi4/m/n/10 create.pos
t[][][] \T1/ptm/m/n/10 and hence [][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/
n/10 and

Underfull \hbox (badness 3128) in paragraph at lines 23479--23485
\T1/ptm/m/n/10 Pos-si-ble val-ues are \T1/zi4/m/n/10 "source" \T1/ptm/m/n/10 (t
he de-fault ex-cept un-der the CRAN OS X build)

Underfull \hbox (badness 1881) in paragraph at lines 23479--23485
\T1/ptm/m/n/10 and \T1/zi4/m/n/10 "mac.binary."\T1/ptm/m/n/10 . Win-dows uses \
T1/zi4/m/n/10 "win.binary"\T1/ptm/m/n/10 . (\T1/zi4/m/n/10 "mac.binary.leopard"
 \T1/ptm/m/n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 23487--23494
[]\T1/ptm/m/n/10 URLs of the repos-i-to-ries for use by [][]\T1/zi4/m/n/10 upda
te.packages[][][]\T1/ptm/m/n/10 . De-faults to

Underfull \hbox (badness 10000) in paragraph at lines 23487--23494
\T1/zi4/m/n/10 c(CRAN="@CRAN@")\T1/ptm/m/n/10 , a value that causes some util-i
-ties to prompt for a

Underfull \hbox (badness 6380) in paragraph at lines 23487--23494
\T1/ptm/m/n/10 CRAN mir-ror. To avoid this do set the CRAN mir-ror, by some-thi
ng like

Underfull \hbox (badness 1082) in paragraph at lines 23487--23494
\T1/zi4/m/n/10 local({r <- getOption("repos"); r["CRAN"] <- "http://my.local.cr
an";
[365] [366] [367] [368]
Underfull \vbox (badness 3803) has occurred while \output is active [369]
Underfull \hbox (badness 10000) in paragraph at lines 23795--23799
[]\T1/ptm/m/n/10 The outer prod-uct of the ar-rays \T1/zi4/m/n/10 X \T1/ptm/m/n
/10 and \T1/zi4/m/n/10 Y \T1/ptm/m/n/10 is the ar-ray \T1/zi4/m/n/10 A \T1/ptm/
m/n/10 with di-men-sion

Underfull \hbox (badness 10000) in paragraph at lines 23795--23799
\T1/zi4/m/n/10 c(dim(X), dim(Y)) \T1/ptm/m/n/10 where el-e-ment \T1/zi4/m/n/10 
A[c(arrayindex.x, arrayindex.y)]
[370] [371] [372] [373] [374]
Underfull \hbox (badness 1748) in paragraph at lines 24116--24120
\T1/ptm/m/n/10 seem un-de-sir-able, e.g., when past-ing two char-ac-ter vec-tor
s, or very de-sir-able, e.g. in
[375] [376] [377] [378] [379] [380] [381] [382]
Underfull \hbox (badness 2726) in paragraph at lines 24615--24618
[]\T1/ptm/m/n/10 character string (or \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 ) in-di
-cat-ing [][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 val-ues in printed out-put,
 see
[383] [384] [385] [386] [387] [388] [389] [390] [391] [392] [393] [394]
[395]
Underfull \hbox (badness 1052) in paragraph at lines 25420--25425
[]\T1/zi4/m/n/10 qr.X \T1/ptm/m/n/10 re-turns $\OML/cmm/b/it/10 X$\T1/ptm/m/n/1
0 , the orig-i-nal ma-trix from which the qr ob-ject was con-structed, pro-vide
d
[396] [397] [398] [399] [400] [401] [402] [403] [404] [405]
Underfull \hbox (badness 1533) in paragraph at lines 26125--26128
[]\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca
n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the
[406] [407] [408] [409] [410] [411] [412] [413] [414] [415] [416] [417]
[418] [419] [420] [421] [422] [423] [424] [425] [426] [427] [428] [429]
[430] [431]
Underfull \hbox (badness 10000) in paragraph at lines 27753--27757
[]\T1/zi4/m/n/10 regexpr \T1/ptm/m/n/10 and \T1/zi4/m/n/10 gregexpr \T1/ptm/m/n
/10 sup-port `named cap-ture'. If groups are named, e.g.,

Underfull \hbox (badness 1221) in paragraph at lines 27753--27757
\T1/zi4/m/n/10 "(?<first>[A-Z][a-z]+)" \T1/ptm/m/n/10 then the po-si-tions of t
he matches are also re-turned by name.

Underfull \hbox (badness 6188) in paragraph at lines 27776--27778
[]\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 http : / / p
ubs . opengroup . org / onlinepubs / 9699919799 /
[432] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] [443]
[444] [445] [446] [447] [448] [449] [450]
Underfull \hbox (badness 10000) in paragraph at lines 28975--28978
[]\T1/zi4/m/n/10 save.image() \T1/ptm/m/n/10 is just a short-cut for `save my c
ur-rent workspace', i.e.,
[451] [452] [453] [454]
Underfull \hbox (badness 2302) in paragraph at lines 29175--29182
[]\T1/ptm/m/n/10 The root-mean-square for a (pos-si-bly cen-tered) col-umn is d
e-fined as $[]$,

Underfull \hbox (badness 2837) in paragraph at lines 29175--29182
\T1/ptm/m/n/10 where $\OML/cmm/m/it/10 x$ \T1/ptm/m/n/10 is a vec-tor of the no
n-missing val-ues and $\OML/cmm/m/it/10 n$ \T1/ptm/m/n/10 is the num-ber of non
-missing

Underfull \hbox (badness 2980) in paragraph at lines 29175--29182
\T1/ptm/m/n/10 val-ues. In the case \T1/zi4/m/n/10 center = TRUE\T1/ptm/m/n/10 
, this is the same as the stan-dard de-vi-a-tion,

Underfull \hbox (badness 2181) in paragraph at lines 29175--29182
\T1/ptm/m/n/10 but in gen-eral it is not. (To scale by the stan-dard de-vi-a-ti
ons with-out cen-ter-ing, use
[455] [456]
Underfull \hbox (badness 2261) in paragraph at lines 29328--29333
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 strip.white \T1/ptm/m/n/10 is of length 1, i
t ap-plies to all fields; oth-er-wise, if

Underfull \hbox (badness 10000) in paragraph at lines 29355--29361
[]\T1/ptm/m/n/10 The es-capes which are in-ter-preted are the con-trol char-ac-
ters
[457]
Underfull \hbox (badness 10000) in paragraph at lines 29428--29433
[]\T1/ptm/m/n/10 Note that since \T1/zi4/m/n/10 sep \T1/ptm/m/n/10 is a sep-a-r
a-tor and not a ter-mi-na-tor, read-ing a file by
[458] [459] [460] [461] [462] [463] [464] [465] [466] [467] [468] [469]
[470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481]
[482] [483] [484] [485] [486] [487] [488] [489] [490] [491] [492] [493]
[494] [495] [496] [497] [498] [499] [500]
Underfull \hbox (badness 1072) in paragraph at lines 32177--32181
[]\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea
d from the file spec-i-fied by

Underfull \hbox (badness 10000) in paragraph at lines 32182--32186
[]\T1/ptm/m/n/10 The command-line op-tion `\T1/zi4/m/n/10 --vanilla\T1/ptm/m/n/
10 ' im-plies `\T1/zi4/m/n/10 --no-site-file\T1/ptm/m/n/10 ', `\T1/zi4/m/n/10 -
-no-init-file\T1/ptm/m/n/10 ',

Underfull \hbox (badness 10000) in paragraph at lines 32210--32216
[]\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file
s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 '

Underfull \hbox (badness 10000) in paragraph at lines 32210--32216
\T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for
 first in architecture-specific di-rec-to-ries, e.g.

Underfull \hbox (badness 3343) in paragraph at lines 32223--32230
\T1/ptm/m/n/10 early in the start-up pro-cess-ing. It con-tains en-vi-ron-ment 
vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the

Underfull \hbox (badness 2573) in paragraph at lines 32223--32230
\T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i
n site or user en-vi-ron-ment

Underfull \hbox (badness 1917) in paragraph at lines 32223--32230
\T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/
n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from
[501] [502] [503] [504] [505]
Underfull \hbox (badness 10000) in paragraph at lines 32513--32519
[]\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the \T1/zi4/m/n/10 form
at \T1/ptm/m/n/10 meth-ods is
[506] [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517]
[518] [519] [520] [521] [522] [523] [524] [525] [526] [527] [528]
Underfull \vbox (badness 10000) has occurred while \output is active [529]
[530]
Underfull \hbox (badness 4416) in paragraph at lines 34070--34072
[]\T1/ptm/m/n/10 Argument \T1/zi4/m/n/10 names \T1/ptm/m/n/10 was in-tro-duced 
in \T1/phv/m/n/10 R \T1/ptm/m/n/10 2.13.0 to avoid need-ing the com-mon use of
[531]
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[]\T1/ptm/m/n/10 If a file-name starts with \T1/zi4/m/n/10 . \T1/ptm/m/n/10 thi
s may need to be matched ex-plic-itly: for ex-am-ple
[532] [533] [534] [535] [536] [537] [538] [539] [540] [541]
Underfull \hbox (badness 1472) in paragraph at lines 34774--34777
[]\T1/ptm/m/n/10 logical. If \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , func-tions kee
p their source in-clud-ing com-ments, see
[542] [543] [544] [545] [546] [547] [548] [549] [550] [551]
Underfull \hbox (badness 2671) in paragraph at lines 35431--35434
[]\T1/ptm/m/n/10 levels to re-move for all fac-tors in \T1/zi4/m/n/10 ...\T1/pt
m/m/n/10 . If set to \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 , it im-plies
[552] [553] [554] [555] [556] [557]
Underfull \hbox (badness 10000) in paragraph at lines 35829--35832
[][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [
][]$http : / / developer . r-[]project . org /
[558] [559]
Underfull \hbox (badness 10000) in paragraph at lines 35950--35954
[][][]\T1/zi4/m/n/10 addTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 r
emoveTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 getTaskCallbackNames
[][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 http : / / developer .
[560]
Underfull \hbox (badness 10000) in paragraph at lines 36012--36016
[][][]\T1/zi4/m/n/10 addTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 r
emoveTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 taskCallbackManager[
][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 http : / / developer .
[561] [562] [563] [564] [565] [566] [567] [568] [569] [570] [571] [572]
[573] [574] [575] [576] [577] [578]
Underfull \hbox (badness 1990) in paragraph at lines 37137--37145
[]\T1/zi4/m/n/10 try \T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any e
r-rors that oc-cur dur-ing the eval-u-a-tion. If

Underfull \hbox (badness 4846) in paragraph at lines 37137--37145
\T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][
]\T1/zi4/m/n/10 stderr[][][] \T1/ptm/m/n/10 con-nec-tion un-less
[579] [580] [581] [582]
Underfull \hbox (badness 1515) in paragraph at lines 37406--37411
[]\T1/ptm/m/n/10 On most plat-forms `file' in-cludes sym-bolic links, fi-fos an
d sock-ets. Prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 2.15.0
[583] [584] [585]
Underfull \hbox (badness 1917) in paragraph at lines 37636--37643
[]\T1/ptm/m/n/10 When a func-tion call-ing \T1/zi4/m/n/10 UseMethod("fun") \T1/
ptm/m/n/10 is ap-plied to an ob-ject with class at-tribute
[586] [587] [588] [589] [590] [591] [592] [593] [594]
Underfull \hbox (badness 3668) in paragraph at lines 38203--38205
[]\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di-
ately, even if
[595] [596]
Underfull \hbox (badness 2401) in paragraph at lines 38304--38308
[]\T1/ptm/m/n/10 See the de-scrip-tion of [][]\T1/zi4/m/n/10 options[][][]("war
n") \T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a
[597] [598] [599]
Underfull \hbox (badness 6542) in paragraph at lines 38481--38486
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 arr.ind == TRUE \T1/ptm/m/n/10 and \T1/zi4/m
/n/10 x \T1/ptm/m/n/10 is an [][]\T1/zi4/m/n/10 array[][][] \T1/ptm/m/n/10 (has
 a [][]\T1/zi4/m/n/10 dim[][][] \T1/ptm/m/n/10 at-tribute), the re-sult is
[600] [601] [602]
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[604] [605] [606]
Underfull \hbox (badness 10000) in paragraph at lines 38909--38914
[]\T1/ptm/m/n/10 This is a spe-cial case of rank-ing, but as a less gen-eral fu
nc-tion than [][]\T1/zi4/m/n/10 rank[][][]

Underfull \hbox (badness 10000) in paragraph at lines 38909--38914
\T1/ptm/m/n/10 is more suit-able to be made generic. The de-fault method is sim
-i-lar to
[607]
Underfull \hbox (badness 5417) in paragraph at lines 38999--39003
[]\T1/zi4/m/n/10 .packages() \T1/ptm/m/n/10 re-turns the names of the cur-rentl
y at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas
[608]
Underfull \hbox (badness 10000) in paragraph at lines 39060--39064
[]\T1/zi4/m/n/10 .standard_regexps \T1/ptm/m/n/10 re-turns a list of `stan-dard
' reg-exps, in-clud-ing el-e-ments named
[609] [610]) (./compiler-pkg.tex
Chapter 2.
[611] [612] [613] [614]) (./datasets-pkg.tex
Chapter 3.

Underfull \hbox (badness 10000) in paragraph at lines 12--14
[]\T1/ptm/m/n/10 This pack-age con-tains a va-ri-ety of datasets. For a com-ple
te list, use
[615] [616] [617] [618] [619] [620] [621] [622] [623] [624] [625] [626]
[627] [628] [629] [630] [631] [632] [633] [634] [635] [636] [637] [638]
[639] [640] [641] [642] [643] [644] [645] [646] [647] [648] [649] [650]
[651] [652] [653] [654] [655] [656] [657] [658] [659] [660] [661]
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[663] [664] [665] [666] [667] [668] [669] [670] [671] [672] [673] [674]
[675] [676] [677] [678] [679] [680]
Underfull \hbox (badness 1325) in paragraph at lines 3873--3876
[]\T1/ptm/m/n/10 For back-ground on Bristle-cone pines and Methuse-lah Walk, se
e [][]$\T1/zi4/m/n/10 http : / / www . sonic . net /
[681]
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[683] [684] [685]
Underfull \vbox (badness 10000) has occurred while \output is active [686]
Underfull \vbox (badness 10000) has occurred while \output is active [687]
[688] [689] [690] [691] [692] [693] [694]) (./grDevices-pkg.tex
Chapter 4.
[695] [696] [697] [698] [699] [700] [701] [702] [703] [704] [705] [706]
[707] [708] [709] [710] [711]
Underfull \hbox (badness 5175) in paragraph at lines 1048--1050
[]\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm
. The source code is in
[712] [713] [714]
Underfull \hbox (badness 1852) in paragraph at lines 1245--1248
[]\T1/zi4/m/n/10 densCols \T1/ptm/m/n/10 com-putes and re-turns the set of col-
ors that will be used in plot-ting, call-ing
[715] [716] [717]
Underfull \hbox (badness 1490) in paragraph at lines 1448--1453
\T1/ptm/m/n/10 by [][]\T1/zi4/m/n/10 rasterImage[][][] \T1/ptm/m/n/10 and [][]\
T1/zi4/m/n/10 grid.raster[][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues \T1/zi4/m/n/
10 "no"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "yes" \T1/ptm/m/n/10 and
[718]
Underfull \hbox (badness 2698) in paragraph at lines 1502--1505
[]\T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 if the de-vice does not sup-port cap-ture,
 oth-er-wise a ma-trix of color names (for
[719]
Underfull \hbox (badness 10000) in paragraph at lines 1571--1575
[]\T1/ptm/m/n/10 logical; if \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , the func-tion 
also re-turns \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/10 when
[720] [721] [722] [723] [724]
Underfull \hbox (badness 1033) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "pgnm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pgnmraw"\T1/ptm/m/n/10 , 
\T1/zi4/m/n/10 "pnm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pnmraw"\T1/ptm/m/n/10 , \T
1/zi4/m/n/10 "ppm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "ppmraw"\T1/ptm/m/n/10 , \T1/
zi4/m/n/10 "pkm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pkmraw"\T1/ptm/m/n/10 , \T1/zi
4/m/n/10 "tiffcrle"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3758) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "tiffg3"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "tiffg32d"\T1/ptm/m/n/10
 , \T1/zi4/m/n/10 "tiffg4"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "tifflzw"\T1/ptm/m/n/
10 , \T1/zi4/m/n/10 "tiffpack"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "tiff12nc"\T1/ptm
/m/n/10 , \T1/zi4/m/n/10 "tiff24nc"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3128) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "tiff32nc" "psmono"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "psgray"\T1/p
tm/m/n/10 , \T1/zi4/m/n/10 "psrgb"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "bit"\T1/ptm/
m/n/10 , \T1/zi4/m/n/10 "bitrgb"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "bitcmyk"\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 "pngmono"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 1546) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "pnggray"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pngalpha"\T1/ptm/m/n/1
0 , \T1/zi4/m/n/10 "png16"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "png256"\T1/ptm/m/n/1
0 , \T1/zi4/m/n/10 "png16m"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "png48"\T1/ptm/m/n/1
0 , \T1/zi4/m/n/10 "jpeg"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "jpeggray"\T1/ptm/m/n/
10 ,
[725]
Underfull \hbox (badness 10000) in paragraph at lines 1963--1965
[]\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the 
set-ting of
[726] [727] [728]
Underfull \hbox (badness 6758) in paragraph at lines 2115--2118
[]\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript
 doc-u-men-ta-tion) are
[729] [730] [731] [732] [733] [734] [735] [736]
Underfull \hbox (badness 10000) in paragraph at lines 2618--2619

[737] [738] [739] [740] [741] [742] [743]
Underfull \hbox (badness 1152) in paragraph at lines 3056--3058
[]\T1/ptm/m/n/10 A length two in-te-ger vec-tor \T1/zi4/m/n/10 nr, nc \T1/ptm/m
/n/10 giv-ing the num-ber of rows and columns, ful-fill-ing
[744] [745] [746] [747] [748]
Underfull \hbox (badness 2856) in paragraph at lines 3377--3380
[]\T1/ptm/m/n/10 For use with \T1/zi4/m/n/10 onefile = FALSE \T1/ptm/m/n/10 giv
e a C in-te-ger for-mat such as

Underfull \hbox (badness 2662) in paragraph at lines 3391--3393
[]\T1/ptm/m/n/10 title string to em-bed as the `\T1/zi4/m/n/10 /Title\T1/ptm/m/
n/10 ' field in the file. De-faults to
[749] [750]
Underfull \hbox (badness 1173) in paragraph at lines 3507--3517
[]\T1/ptm/m/n/10 The \T1/zi4/m/n/10 paper \T1/ptm/m/n/10 ar-gu-ment sets the `\
T1/zi4/m/n/10 /MediaBox\T1/ptm/m/n/10 ' en-try in the file, which de-faults to 
\T1/zi4/m/n/10 width \T1/ptm/m/n/10 by
[751] [752] [753] [754] [755] [756] [757]
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[759]
Underfull \vbox (badness 3803) has occurred while \output is active [760]
[761]
Underfull \hbox (badness 1067) in paragraph at lines 4208--4215
\T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled
 with sup-
[762] [763] [764]
Underfull \hbox (badness 1789) in paragraph at lines 4430--4432
[]\T1/ptm/m/n/10 title string to em-bed as the \T1/zi4/m/n/10 Title \T1/ptm/m/n
/10 com-ment in the file. De-faults to
[765]
Underfull \hbox (badness 1377) in paragraph at lines 4480--4485
[]\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently 
al-lowed val-ues

Underfull \hbox (badness 2671) in paragraph at lines 4507--4515
\T1/ptm/m/n/10 For use in this way you will prob-a-bly want to use [][]\T1/zi4/
m/n/10 setEPS[][][]() \T1/ptm/m/n/10 to set the de-faults as
[766]
Underfull \hbox (badness 1418) in paragraph at lines 4556--4563
\T1/ptm/m/n/10 it is one of \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4
/m/n/10 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/
zi4/m/n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm
/m/n/10 ,

Underfull \hbox (badness 2443) in paragraph at lines 4564--4573
\T1/ptm/m/n/10 PostScript de-vice is us-ing URW fonts, you will ob-tain ac-cess
 to more char-ac-ters and

Underfull \hbox (badness 2653) in paragraph at lines 4564--4573
\T1/ptm/m/n/10 more ap-pro-pri-ate met-rics by us-ing these names. To make thes
e eas-ier to re-mem-ber,

Underfull \hbox (badness 1755) in paragraph at lines 4574--4576
[]\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East 
Asian lan-guages -- see
[767] [768]
Underfull \hbox (badness 1057) in paragraph at lines 4685--4690
[]\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are \
T1/zi4/m/n/10 "rgb"\T1/ptm/m/n/10 ) (which is RGB+gray) and

Underfull \hbox (badness 7344) in paragraph at lines 4745--4747
[]\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t
ion by Brian D'Urso
[769] [770] [771]
Underfull \hbox (badness 2035) in paragraph at lines 4869--4878
[]\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv
-a-lents) are also pro-

Underfull \hbox (badness 10000) in paragraph at lines 4869--4878
\T1/ptm/m/n/10 vided: \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/zi4/m/
n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm/m/n/1
0 ,

Underfull \hbox (badness 10000) in paragraph at lines 4869--4878
\T1/zi4/m/n/10 "NewCenturySchoolbook"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Palatino"
 \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "Times"\T1/ptm/m/n/10 ; \T1/zi4/m/n/10 "URWG
othic"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "URWBookman"\T1/ptm/m/n/10 ,
[772]
Underfull \hbox (badness 6775) in paragraph at lines 4936--4944
\T1/ptm/m/n/10 can be found at [][]$\T1/zi4/m/n/10 ftp : / / ftp . gnu . org / 
pub / non-[]gnu / chinese-[]fonts-[]truetype/$[][]\T1/ptm/m/n/10 . Ken

Underfull \hbox (badness 3000) in paragraph at lines 4936--4944
\T1/ptm/m/n/10 Lunde's CJKV re-sources are at [][]$\T1/zi4/m/n/10 ftp : / / ftp
 . oreilly . com / pub / examples / nutshell / cjkv /

Underfull \hbox (badness 7344) in paragraph at lines 4955--4957
[]\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t
ion by Brian D'Urso
[773] [774]
Underfull \hbox (badness 1546) in paragraph at lines 5075--5083
[]\T1/ptm/m/n/10 arguments \T1/zi4/m/n/10 onefile\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 family\T1/ptm/m/n/10 , \T1/zi4/m/n/10 title\T1/ptm/m/n/10 , \T1/zi4/m/n/10 fo
nts\T1/ptm/m/n/10 , \T1/zi4/m/n/10 encoding\T1/ptm/m/n/10 , \T1/zi4/m/n/10 bg\T
1/ptm/m/n/10 , \T1/zi4/m/n/10 fg\T1/ptm/m/n/10 , \T1/zi4/m/n/10 width\T1/ptm/m/
n/10 ,
[775]
Underfull \hbox (badness 1648) in paragraph at lines 5152--5156
[]\T1/ptm/m/n/10 title for the Quartz win-dow (ap-plies to on-screen out-put on
ly), de-fault
[776] [777] [778] [779] [780] [781] [782]
Underfull \hbox (badness 10000) in paragraph at lines 5569--5572
[]\T1/zi4/m/n/10 rgb2hsv \T1/ptm/m/n/10 trans-forms col-ors from RGB space (red
/green/blue) into HSV space
[783] [784] [785] [786] [787] [788] [789]
Underfull \hbox (badness 1189) in paragraph at lines 5965--5967
[]\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used
. One of
[790]
Underfull \hbox (badness 10000) in paragraph at lines 6063--6065
[]\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" \T1/ptm/m/n/10 for CJK 
lan-guages and
[791] [792] [793] [794] [795]
Underfull \hbox (badness 3780) in paragraph at lines 6354--6360
[]\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of \T1/zi4/m/n/1
0 "AvantGarde"\T1/ptm/m/n/10 ,
[796] [797]
Underfull \hbox (badness 2680) in paragraph at lines 6550--6552
[]\T1/ptm/m/n/10 multiplicities (pos-i-tive in-te-gers); i.e., \T1/zi4/m/n/10 n
umber[i] \T1/ptm/m/n/10 is the mul-ti-plic-ity of
[798] [799] [800]) (./graphics-pkg.tex
Chapter 5.
[801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811]
Underfull \hbox (badness 10000) in paragraph at lines 690--697
[]\T1/zi4/m/n/10 axTicks() \T1/ptm/m/n/10 can be used an \T1/phv/m/n/10 R \T1/p
tm/m/n/10 in-ter-face to the C func-tion \T1/zi4/m/n/10 CreateAtVector() \T1/pt
m/m/n/10 in
[812] [813] [814] [815] [816] [817] [818] [819] [820] [821]
Underfull \hbox (badness 4634) in paragraph at lines 1253--1256
[][][]\T1/zi4/m/n/10 boxplot.default[][][] \T1/ptm/m/n/10 which al-ready works 
nowa-days with data.frames; [][]\T1/zi4/m/n/10 boxplot.formula[][][]\T1/ptm/m/n
/10 ,
[822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833]
[834] [835] [836] [837] [838]
Underfull \hbox (badness 1009) in paragraph at lines 2285--2292
\T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n
ot ap-ply to
[839] [840] [841] [842] [843] [844] [845] [846] [847] [848] [849] [850]
[851] [852] [853] [854] [855] [856] [857] [858] [859] [860]
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[862] [863] [864]
Underfull \hbox (badness 1867) in paragraph at lines 3911--3915
[]\T1/ptm/m/n/10 vector of back-ground (fill) col-ors for the open plot sym-bol
s given by
[865] [866] [867] [868] [869] [870] [871] [872]
Underfull \hbox (badness 1924) in paragraph at lines 4362--4367
[]\T1/ptm/m/n/10 a func-tion which in-di-cates what should hap-pen when the dat
a con-tain
[873]
Underfull \hbox (badness 2529) in paragraph at lines 4391--4394
[]\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are 
to be used: see
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[]\T1/ptm/b/it/10 R.O.\T1/ptm/m/n/10 ; size of de-fault char-ac-ter \T1/zi4/m/n
/10 (width, height) \T1/ptm/m/n/10 in user co-or-di-nate units.

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\T1/zi4/m/n/10 par("cxy") \T1/ptm/m/n/10 is \T1/zi4/m/n/10 par("cin")/par("pin"
) \T1/ptm/m/n/10 scaled to user co-or-di-nates. Note that
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[]\T1/ptm/m/n/10 The five stan-dard dash-dot line types (\T1/zi4/m/n/10 lty = 2
:6\T1/ptm/m/n/10 ) cor-re-spond to
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[][] 
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\T1/ptm/m/n/10 avoided (see the Warn-ings sec-tion be-low). Split-screen mode i
s ex-ited by the com-mand
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[]\T1/ptm/m/n/10 For each \T1/zi4/m/n/10 i\T1/ptm/m/n/10 , a line seg-ment is d
rawn be-tween the point \T1/zi4/m/n/10 (x0[i], y0[i]) \T1/ptm/m/n/10 and the po
int
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[]\T1/ptm/m/n/10 The main ti-tle (on top) us-ing font and size (char-ac-ter ex-
pan-sion)

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[]\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font and size \T1/zi4/m/n/10 par
("font.sub") \T1/ptm/m/n/10 and color
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l.8649 \HeaderA{units}{Graphical Units}{units}
                                               [942] [943] [944] [945] [946])
(./grid-pkg.tex
Chapter 6.

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[]\T1/ptm/m/n/10 Note that \T1/zi4/m/n/10 preDrawDetails \T1/ptm/m/n/10 and \T1
/zi4/m/n/10 postDrawDetails \T1/ptm/m/n/10 are also called in the cal-cu-la-tio
n of
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[][][]\T1/ptm/m/n/10 Grid[][][], [][]\T1/zi4/m/n/10 pushViewport[][][]\T1/ptm/m
/n/10 , [][]\T1/zi4/m/n/10 popViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10
 downViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 seekViewport[][][]\T1/pt
m/m/n/10 , [][]\T1/zi4/m/n/10 upViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/
10 unit[][][]\T1/ptm/m/n/10 ,
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[]\T1/ptm/m/n/10 Both func-tions cre-ate an ar-rows grob (a graph-i-cal ob-ject
 de-scrib-ing ar-rows), but only
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[]\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec
t de-scrib-ing seg-ments), but only
[1021] [1022] [1023] [1024]
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[]\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject
s are co-erced by
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\T1/ptm/m/n/10 and to spec-ify the min-i-mum or max-i-mum of a list of unit ob-
jects (e.g.,
[1045] [1046] [1047] [1048] [1049] [1050] [1051] [1052] [1053]
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[]\T1/ptm/m/n/10 This can be use-ful for re-turn-ing to your start-ing point by
 do-ing some-thing like
[1054] [1055] [1056] [1057]) (./methods-pkg.tex [1058]
Chapter 7.
[1059] [1060] [1061] [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069]
[1070] [1071] [1072] [1073] [1074]
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[]\T1/ptm/m/n/10 The class \T1/zi4/m/n/10 "className" \T1/ptm/m/n/10 ex-tends \
T1/zi4/m/n/10 "character" \T1/ptm/m/n/10 and has a slot \T1/zi4/m/n/10 "package
"\T1/ptm/m/n/10 , also of class
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[]\T1/ptm/m/n/10 The ar-gu-ment to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/10 c
an be an ob-ject of class

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\T1/ptm/m/n/10 file name is passed to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/1
0 it calls \T1/zi4/m/n/10 evalSource \T1/ptm/m/n/10 to ob-tain the
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[]\T1/ptm/m/n/10 As you might ex-pect [][]\T1/zi4/m/n/10 setGeneric[][][] \T1/p
tm/m/n/10 and [][]\T1/zi4/m/n/10 setGroupGeneric[][][] \T1/ptm/m/n/10 cre-ate o
b-jects of class
[1096] [1097]
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[]\T1/ptm/m/n/10 In \T1/zi4/m/n/10 getGenerics\T1/ptm/m/n/10 , if \T1/zi4/m/n/1
0 TRUE\T1/ptm/m/n/10 , the \T1/zi4/m/n/10 package \T1/ptm/m/n/10 slot of the re
-turned re-sult is in
[1098]
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\T1/ptm/m/n/10 In ad-di-tion, \T1/zi4/m/n/10 removeGeneric \T1/ptm/m/n/10 re-mo
ves the func-tion it-self; \T1/zi4/m/n/10 removeMethods \T1/ptm/m/n/10 re-store
s the
[1099] [1100] [1101] [1102] [1103] [1104] [1105]
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[]\T1/zi4/m/n/10 getPackageName \T1/ptm/m/n/10 re-turns the character-string na
me of the pack-age (with-out the ex-tra-ne-ous
[1106] [1107] [1108] [1109] [1110]
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[]\T1/ptm/m/n/10 The \T1/zi4/m/n/10 initialize \T1/ptm/m/n/10 method for these 
classes takes spe-cial ar-gu-ments

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[]\T1/ptm/m/n/10 The
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[]\T1/ptm/m/n/10 The class \T1/zi4/m/n/10 "SealedMethodDefinition" \T1/ptm/m/n/
10 is cre-ated by a call to [][]\T1/zi4/m/n/10 setMethod[][][] \T1/ptm/m/n/10 w
ith ar-gu-ment

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[]\T1/ptm/m/n/10 class [][]\T1/zi4/m/n/10 MethodsList[][][] \T1/ptm/m/n/10 for 
the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar

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\T1/zi4/m/n/10 MethodDefinition\T1/ptm/m/n/10 , or an ex-ten-sion. Class [][]\T
1/zi4/m/n/10 MethodWithNext[][][] \T1/ptm/m/n/10 for an ex-ten-sion used by
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\T1/ptm/m/n/10 names cor-re-spond-ing to some or all of the for-mal ar-gu-ments
. In the pre-vi-ous ex-am-ple,

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\T1/ptm/m/n/10 if se-lect-ing class \T1/zi4/m/n/10 "track" \T1/ptm/m/n/10 for \
T1/zi4/m/n/10 x\T1/ptm/m/n/10 , find-ing that the se-lec-tion was an-other meth
-ods list and

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[]\T1/ptm/m/n/10 Object of class \T1/zi4/m/n/10 "PossibleMethod" \T1/ptm/m/n/10
 the method to use in re-sponse to a
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[]\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o
ds for this class are found (us-ing
[1140] [1141] [1142] [1143]
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[]\T1/ptm/m/n/10 Two op-tional method names are in-ter-preted spe-cially, \T1/z
i4/m/n/10 initialize \T1/ptm/m/n/10 and
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                                                 [1158]
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[]\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic 
can be ob-tained by call-ing
[1159] [1160] [1161]
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[]\T1/ptm/m/n/10 for \T1/zi4/m/n/10 .selectSuperClasses() \T1/ptm/m/n/10 only, 
a [][]\T1/zi4/m/n/10 list[][][] \T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cal
ly
[1162] [1163] [1164] [1165] [1166] [1167] [1168] [1169] [1170] [1171] [1172]
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[]\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance 
in R [][]$\T1/zi4/m/n/10 http : / / stat . stanford . edu / ~jmc4 /
[1195]
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[]\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl
ass, from the data part; e.g.,
[1196] [1197] [1198] [1199]) (./parallel-pkg.tex [1200]
Chapter 8.

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[]\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `\T1/zi4
/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"\T1/ptm/m/n/10 ' [][]RNG[
][][]: see
[1201] [1202] [1203] [1204] [1205] [1206] [1207] [1208] [1209] [1210] [1211]
[1212] [1213] [1214] [1215] [1216] [1217] [1218] [1219]
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[]\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by \T1/zi4/m/n/10 .R
andom.seed \T1/ptm/m/n/10 when the
[1220] [1221] [1222]) (./splines-pkg.tex
Chapter 9.

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[]\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 <bates@stat.wisc.edu> \T1/ptm/
m/n/10 and William N. Ven-ables
[1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233]
[1234] [1235] [1236] [1237]) (./stats-pkg.tex [1238]
Chapter 10.
[1239] [1240] [1241] [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249]
[1250] [1251]
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[]\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from \T1/zi4/m/n/10 lm 
\T1/ptm/m/n/10 or \T1/zi4/m/n/10 aov\T1/ptm/m/n/10 , or a for-mula for
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[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1260] [1261] [1262]
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[]\T1/ptm/m/n/10 An ob-ject of class \T1/zi4/m/n/10 c("aov", "lm") \T1/ptm/m/n/
10 or for mul-ti-ple re-sponses of class
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[]\T1/ptm/m/n/10 the AIC value cor-re-spond-ing to the log-likelihood. Only val
id for
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[]\T1/ptm/m/n/10 the AIC value cor-re-spond-ing to the log-likelihood. Only val
id for
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[1290]
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[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1291] [1292] [1293] [1294] [1295] [1296] [1297] [1298] [1299] [1300] [1301]
[1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310]
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[]\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 
(\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/
it/10 g[] \OT1/cmr/m/n/10 =
[1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] [1320]
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[]\T1/ptm/m/n/10 Note that the usual def-i-ni-tion of con-vo-lu-tion of two se-
quences \T1/zi4/m/n/10 x \T1/ptm/m/n/10 and \T1/zi4/m/n/10 y \T1/ptm/m/n/10 is 
given by
[1321] [1322] [1323] [1324]
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\T1/ptm/m/n/10 For \T1/zi4/m/n/10 cov()\T1/ptm/m/n/10 , a non-Pearson method is
 un-usual but avail-able for the sake of com-plete-ness.
[1325] [1326]
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[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1327]
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[]\T1/ptm/m/n/10 For Spear-man's test, p-values are com-puted us-ing al-go-rith
m AS 89 for $\OML/cmm/m/it/10 n < \OT1/cmr/m/n/10 1290$ \T1/ptm/m/n/10 and
[1328] [1329] [1330] [1331] [1332] [1333] [1334]
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\T1/ptm/m/n/10 then \T1/zi4/m/n/10 y \T1/ptm/m/n/10 is a den-dro-gram of the sa
me graph struc-ture as \T1/zi4/m/n/10 x \T1/ptm/m/n/10 and for each node,
[1335] [1336] [1337] [1338] [1339]
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[]\T1/ptm/m/n/10 Objects of class \T1/zi4/m/n/10 "hclust" \T1/ptm/m/n/10 can be
 con-verted to class \T1/zi4/m/n/10 "dendrogram" \T1/ptm/m/n/10 us-ing method

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[]\T1/zi4/m/n/10 rev.dendrogram \T1/ptm/m/n/10 sim-ply re-turns the den-dro-gra
m \T1/zi4/m/n/10 x \T1/ptm/m/n/10 with re-versed nodes, see also
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[]\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][]\T
1/zi4/m/n/10 dist[][][]()\T1/ptm/m/n/10 , the
[1352] [1353]
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[]\T1/ptm/m/n/10 The CRAN task view on dis-tri-bu-tions, [][]$\T1/zi4/m/n/10 ht
tp : / / cran . r-[]project . org / web / views /
[1354] [1355] [1356] [1357]
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Underfull \hbox (badness 2626) in paragraph at lines 8629--8632
[]\T1/ptm/m/n/10 Either \T1/zi4/m/n/10 "convolution" \T1/ptm/m/n/10 or \T1/zi4/
m/n/10 "recursive" \T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If
[1378]
Underfull \hbox (badness 2503) in paragraph at lines 8729--8733
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1379] [1380] [1381] [1382] [1383] [1384]
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[]\T1/ptm/m/n/10 the char-ac-ter string \T1/zi4/m/n/10 "Fligner-Killeen test of
 homogeneity of variances"\T1/ptm/m/n/10 . 
[1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394]
Underfull \hbox (badness 1019) in paragraph at lines 9729--9732
[]\T1/ptm/m/n/10 See also [][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org /
 wiki / Incomplete _ gamma _ function$[][]\T1/ptm/m/n/10 , or [][]$\T1/zi4/m/n/
10 http : / / dlmf .
[1395] [1396] [1397] [1398]
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[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1399] [1400] [1401] [1402] [1403]
Underfull \hbox (badness 2142) in paragraph at lines 10333--10336
[]\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p
tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1
0 dev \OMS/cmsy/m/n/10 ^^@

Underfull \hbox (badness 1253) in paragraph at lines 10352--10355
[]\T1/ptm/m/n/10 When \T1/zi4/m/n/10 trace \T1/ptm/m/n/10 is true, calls to [][
]\T1/zi4/m/n/10 cat[][][] \T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-
er-a-tion. Hence,
[1404]
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[]\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter-
na-tives are:
[1405] [1406] [1407] [1408] [1409]
Underfull \hbox (badness 1694) in paragraph at lines 10762--10765
[]\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these 
de-fault to
[1410]
Underfull \hbox (badness 1867) in paragraph at lines 10781--10790
\T1/ptm/m/n/10 in the row case. If ei-ther is miss-ing, as by de-fault, then th
e or-der-ing of the cor-re-
[1411] [1412] [1413] [1414] [1415] [1416] [1417]pdfTeX warning (ext4): destinat
ion with the same identifier (name{Rfn.hat}) has been already used, duplicate i
gnored
<to be read again> 
                   \relax 
l.11228 \aliasA{hat}{influence.measures}{hat}
                                              [1418] [1419]
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[]\T1/ptm/m/n/10 The func-tion \T1/zi4/m/n/10 hat() \T1/ptm/m/n/10 ex-ists main
ly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing
[1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] [1428]
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[]\T1/ptm/m/n/10 vector of dif-fer-enc-ing co-ef-fi-cients, so an ARMA model is
 fit-ted to
[1429] [1430] [1431] [1432] [1433]
Underfull \hbox (badness 2894) in paragraph at lines 12196--12200
[]\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f
ault method
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[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454]
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[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] [1463] [1464] [1465]
[1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473]
Underfull \hbox (badness 2503) in paragraph at lines 14694--14698
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1474] [1475]
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[]\T1/zi4/m/n/10 model.offset \T1/ptm/m/n/10 and \T1/zi4/m/n/10 model.response 
\T1/ptm/m/n/10 are equiv-a-lent to \T1/zi4/m/n/10 model.extract(, "offset") \T1
/ptm/m/n/10 and
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[1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] [1502] [1503] [1504]
[1505]
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[1507] [1508]
Underfull \hbox (badness 2359) in paragraph at lines 16828--16830
[]\T1/ptm/m/n/10 Douglas M. Bates and Saikat De-bRoy: David M. Gay for the For-
tran code used by
[1509]
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[1523]
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[]\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz
a-tion is per-formed on

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[]\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma
-tion to the gra-di-ent, on

Underfull \hbox (badness 1184) in paragraph at lines 17752--17756
\T1/ptm/m/n/10 value by a fac-tor of \T1/zi4/m/n/10 reltol * (abs(val) + reltol
) \T1/ptm/m/n/10 at a step. De-faults to

Underfull \hbox (badness 2662) in paragraph at lines 17760--17764
[]\T1/ptm/m/n/10 The fre-quency of re-ports for the \T1/zi4/m/n/10 "BFGS"\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 "L-BFGS-B" \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "SANN" \
T1/ptm/m/n/10 meth-ods if
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[1528] [1529] [1530] [1531] [1532] [1533]
Underfull \hbox (badness 1337) in paragraph at lines 18376--18379
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544]
[1545] [1546]
Underfull \hbox (badness 5563) in paragraph at lines 19103--19105
[]\T1/ptm/m/n/10 logical. If \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , add to al-read
y ex-ist-ing plot. Only valid for

Underfull \hbox (badness 1194) in paragraph at lines 19106--19109
[]\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting
 of the con-fi-dence
[1547] [1548] [1549] [1550] [1551] [1552]
Underfull \hbox (badness 2503) in paragraph at lines 19478--19481
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1553]
Underfull \hbox (badness 10000) in paragraph at lines 19505--19507
[]\T1/ptm/m/n/10 the char-ac-ter string \T1/zi4/m/n/10 "Exact Poisson test" \T1
/ptm/m/n/10 or
[1554] [1555] [1556] [1557] [1558] [1559] [1560] [1561] [1562] [1563] [1564]
[1565] [1566] [1567] [1568]
Underfull \hbox (badness 10000) in paragraph at lines 20475--20481
[]\T1/ptm/m/n/10 For time-series pre-dic-tion, [][]\T1/zi4/m/n/10 predict.ar[][
][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 predict.Arima[][][]\T1/ptm/m/n/10 , [][]
\T1/zi4/m/n/10 predict.arima0[][][]\T1/ptm/m/n/10 ,
[1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] [1577] [1578] [1579]
[1580] [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] [1589] [1590]
[1591]
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[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602]
[1603]
Underfull \hbox (badness 10000) in paragraph at lines 22574--22577
[]\T1/ptm/m/n/10 Optional vec-tor with clus-ter mem-ber-ships as re-turned by
[1604] [1605] [1606] [1607] [1608] [1609] [1610] [1611] [1612] [1613]
Underfull \hbox (badness 10000) in paragraph at lines 23150--23153
[]\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult \T1/zi4/m/n/10 y = run
med(x, k) \T1/ptm/m/n/10 sim-ply has

Underfull \hbox (badness 3690) in paragraph at lines 23201--23205
[][][]\T1/zi4/m/n/10 smoothEnds[][][] \T1/ptm/m/n/10 which im-ple-ments Tukey's
 end point rule and is called by de-fault from
[1614] [1615] [1616] [1617] [1618]
Underfull \hbox (badness 7667) in paragraph at lines 23467--23469
[]\T1/ptm/m/n/10 a nu-meric vec-tor or an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-je
ct which is co-ercible to one by
[1619] [1620] [1621] [1622]
Underfull \hbox (badness 3439) in paragraph at lines 23676--23682
[][]\T1/zi4/m/n/10 SSasympOff[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSasympO
rig[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSbiexp[][][]\T1/ptm/m/n/10 , [][]
\T1/zi4/m/n/10 SSfol[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSfpl[][][]\T1/pt
m/m/n/10 , [][]\T1/zi4/m/n/10 SSgompertz[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/
10 SSlogis[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSmicmen[][][]\T1/ptm/m/n/1
0 ,
[1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633]
[1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] [1643] [1644]
[1645]
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Underfull \hbox (badness 3514) in paragraph at lines 25217--25222
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1647]
Underfull \hbox (badness 3514) in paragraph at lines 25279--25284
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1648]
Underfull \hbox (badness 3514) in paragraph at lines 25336--25341
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1649]
Underfull \hbox (badness 3514) in paragraph at lines 25397--25403
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1650] [1651] [1652] [1653]
Underfull \hbox (badness 3514) in paragraph at lines 25592--25597
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion

Underfull \hbox (badness 3514) in paragraph at lines 25648--25653
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1654]
Underfull \hbox (badness 3514) in paragraph at lines 25705--25710
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1655]
Underfull \hbox (badness 3514) in paragraph at lines 25760--25765
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1656] [1657]
Underfull \hbox (badness 6691) in paragraph at lines 25829--25834
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 x\T1/p
tm/m/n/10 . It is the value of the ex-pres-sion
[1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665]
Underfull \hbox (badness 10000) in paragraph at lines 26342--26345
[]\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-

Underfull \hbox (badness 10000) in paragraph at lines 26342--26345
\T1/ptm/m/n/10 trac-tion, which should be odd. If \T1/zi4/m/n/10 NULL\T1/ptm/m/
n/10 , the de-fault,
[1666] [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] [1675]
Underfull \hbox (badness 5431) in paragraph at lines 26948--26950
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1676] [1677] [1678] [1679]
Underfull \hbox (badness 5431) in paragraph at lines 27158--27161
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1680] [1681] [1682] [1683] [1684]
Underfull \hbox (badness 1337) in paragraph at lines 27469--27473
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1685] [1686]
Underfull \hbox (badness 10000) in paragraph at lines 27586--27589
[]\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/
10 ; cur-rently ex-cept for \T1/zi4/m/n/10 rt()\T1/ptm/m/n/10 , only for
[1687] [1688] [1689]
Underfull \hbox (badness 1616) in paragraph at lines 27769--27772
[]\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial
 resid-u-als, when
[1690] [1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700]
[1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711]
[1712]
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[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720]
Underfull \hbox (badness 1337) in paragraph at lines 29653--29657
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1721]
Underfull \hbox (badness 5161) in paragraph at lines 29746--29748
[]\T1/ptm/m/n/10 an es-ti-mate of the lo-ca-tion pa-ram-e-ter. (Only present if
 ar-gu-ment
[1722] [1723] [1724] [1725] [1726] [1727]
Underfull \hbox (badness 10000) in paragraph at lines 30110--30115
[]\T1/ptm/m/n/10 There is a \T1/zi4/m/n/10 summary \T1/ptm/m/n/10 method for co
n-tin-gency ta-ble ob-jects cre-ated by \T1/zi4/m/n/10 table \T1/ptm/m/n/10 or
[1728] [1729] [1730]) (./stats4-pkg.tex
Chapter 11.
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h the same identifier (name{Rfn.show.Rdash.methods}) has been already used, dup
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                   \relax 
l.407 ...Package \pkg{stats4}}{show.Rdash.methods}
                                                   [1737] [1738] [1739]
[1740]) (./tcltk-pkg.tex
Chapter 12.
[1741] [1742] [1743] [1744] [1745] [1746] [1747]
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[]\T1/zi4/m/n/10 tcl \T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-ing
 any Tk or Tcl com-mand by sim-ply run-ning
[1750] [1751] [1752] [1753]
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[1755] [1756] [1757] [1758] [1759] [1760]
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[][][]\T1/zi4/m/n/10 select.list[][][] \T1/ptm/m/n/10 (a text ver-sion ex-cept 
on Win-dows and the OS X GUI), [][]\T1/zi4/m/n/10 menu[][][] \T1/ptm/m/n/10 (wh
ose
[1761]) (./tools-pkg.tex [1762]
Chapter 13.
[1763]

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[1764]
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[]\T1/zi4/m/n/10 assertWarning() \T1/ptm/m/n/10 as-serts that a warn-ing will b
e sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas
[1765] [1766]
Underfull \hbox (badness 1308) in paragraph at lines 285--298
[]\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t
o ren-der each of the 12 types

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\T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][]\T1/zi4/m/n/10 bibe
ntry[][][] \T1/ptm/m/n/10 as well as sev-eral other rou-tines de-

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\T1/zi4/m/n/10 formatIncollection\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatInProcee
dings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatManual\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 formatMastersthesis\T1/ptm/m/n/10 ,

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\T1/zi4/m/n/10 formatMisc\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatPhdthesis\T1/ptm
/m/n/10 , \T1/zi4/m/n/10 formatProceedings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 forma
tTechreport \T1/ptm/m/n/10 and
[1767] [1768] [1769]
Underfull \hbox (badness 2080) in paragraph at lines 449--454
\T1/ptm/m/n/10 ac-ters. It is sorted by Uni-code point and within a point al-ph
a-bet-i-cally on the glyph

Underfull \hbox (badness 2644) in paragraph at lines 449--454
\T1/ptm/m/n/10 (there can be more than one name for a Uni-code point). The data
 are in the file
[1770] [1771] [1772] [1773] [1774]
Overfull \vbox (3.73149pt too high) has occurred while \output is active
[1775] [1776] [1777] [1778]
Underfull \hbox (badness 1635) in paragraph at lines 962--964
[]\T1/ptm/m/n/10 Delete files in the tem-po-rary di-rec-tory? This op-tion is i
g-nored when
[1779]
Underfull \hbox (badness 4441) in paragraph at lines 1036--1044
\T1/ptm/m/n/10 giv-ing the repos-i-to-ries to use for lo-cat-ing re-verse de-pe
n-den-cies (de-

Underfull \hbox (badness 1014) in paragraph at lines 1056--1058
[]\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v
erse de-pen-den-cies
[1780]
Underfull \hbox (badness 10000) in paragraph at lines 1079--1082
[]\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing


Overfull \hbox (15.52087pt too wide) in paragraph at lines 1079--1082
\T1/zi4/m/n/10 summarize_check_packages_in_dir_results \T1/ptm/m/n/10 and \T1/z
i4/m/n/10 summarize_check_packages_in_dir_timings\T1/ptm/m/n/10 ,
[1781] [1782]
Underfull \hbox (badness 10000) in paragraph at lines 1207--1209
[]\T1/ptm/m/n/10 Re-save PDF files (es-pe-cially vi-gnettes) more com-pactly. S
up-port func-tion for
[1783] [1784]
Underfull \hbox (badness 7981) in paragraph at lines 1378--1382
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
 sub-set of
[1785]
Underfull \hbox (badness 1082) in paragraph at lines 1384--1386
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br
ary trees, or \T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 for all known trees (see
[1786] [1787] [1788] [1789]
Underfull \hbox (badness 5726) in paragraph at lines 1651--1656
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 reduce \T1/ptm/m/n/10 is \T1/zi4/m/n/10 TRUE
\T1/ptm/m/n/10 , the sys-tem will col-lapse the fields in the \T1/zi4/m/n/10 De
pendsList \T1/ptm/m/n/10 ob-ject

Underfull \hbox (badness 7221) in paragraph at lines 1651--1656
\T1/ptm/m/n/10 such that a min-i-mal set of de-pen-den-cies are spec-i-fied (fo
r in-stance if there was
[1790] [1791] [1792] [1793] [1794] [1795] [1796]
Underfull \hbox (badness 7981) in paragraph at lines 2025--2031
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
 sub-set of
[1797] [1798] [1799] [1800]

LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined
(Font)              using `T1/zi4/m/n' instead on input line 2279.

[1801] [1802] [1803]
Underfull \hbox (badness 1424) in paragraph at lines 2516--2518
[]\T1/zi4/m/sl/10 NULL \T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec-t
or of links, as re-turned by
[1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812]
Underfull \hbox (badness 1675) in paragraph at lines 3035--3037
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing how the news en-tries shoul
d be \T1/ptm/m/it/10 chopped\T1/ptm/m/n/10 ;
[1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] [1821]
Underfull \hbox (badness 1838) in paragraph at lines 3587--3593
[]\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p
o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists.
 The

Underfull \hbox (badness 10000) in paragraph at lines 3587--3593
\T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in 
the pack-age are ex-am-ined to cre-ate a file
[1822] [1823]
Underfull \hbox (badness 5726) in paragraph at lines 3667--3672
[]\T1/ptm/m/n/10 If \T1/zi4/m/sl/10 reduce \T1/ptm/m/n/10 is \T1/zi4/m/sl/10 TR
UE\T1/ptm/m/n/10 , the sys-tem will col-lapse the fields in the \T1/zi4/m/sl/10
 DependsList \T1/ptm/m/n/10 ob-ject

Underfull \hbox (badness 7221) in paragraph at lines 3667--3672
\T1/ptm/m/n/10 such that a min-i-mal set of de-pen-den-cies are spec-i-fied (fo
r in-stance if there was
[1824] [1825]
Underfull \hbox (badness 1688) in paragraph at lines 3805--3817
[]\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to be used in the `\T
1/zi4/m/sl/10 PACKAGES\T1/ptm/m/n/10 ' and
[1826] [1827] [1828] [1829]) (./utils-pkg.tex [1830]
Chapter 14.
[1831]
Underfull \hbox (badness 2556) in paragraph at lines 47--52
[]\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `\T
1/zi4/m/sl/10 insertions\T1/ptm/m/n/10 ',
[1832] [1833]
Underfull \hbox (badness 1454) in paragraph at lines 197--200
[]\T1/ptm/m/n/10 logical in-di-cat-ing if the search should be case-insensitive
, \T1/zi4/m/sl/10 TRUE \T1/ptm/m/n/10 by de-

Underfull \hbox (badness 1540) in paragraph at lines 213--216
[]\T1/zi4/m/sl/10 find \T1/ptm/m/n/10 is a dif-fer-ent user in-ter-face for the
 same task as \T1/zi4/m/sl/10 apropos\T1/ptm/m/n/10 . How-ever, by de-fault
[1834] [1835] [1836] [1837] [1838] [1839]
Underfull \hbox (badness 10000) in paragraph at lines 538--544
[]\T1/ptm/m/n/10 Functions \T1/zi4/m/sl/10 aspell_package_Rd_files\T1/ptm/m/n/1
0 , \T1/zi4/m/sl/10 aspell_package_vignettes\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3343) in paragraph at lines 538--544
\T1/zi4/m/sl/10 aspell_package_R_files \T1/ptm/m/n/10 and \T1/zi4/m/sl/10 aspel
l_package_C_files \T1/ptm/m/n/10 per-form spell check-ing on the
[1840]
Underfull \hbox (badness 5847) in paragraph at lines 649--655
[]\T1/ptm/m/n/10 Argument \T1/zi4/m/sl/10 filters \T1/ptm/m/n/10 can be used to
 se-lect which of the pack-ages on the repos-i-to-

Underfull \hbox (badness 4229) in paragraph at lines 649--655
\T1/ptm/m/n/10 ries are re-ported. It is called with its de-fault value (\T1/zi
4/m/sl/10 NULL\T1/ptm/m/n/10 ) by func-tions such as
[1841]
Underfull \hbox (badness 3861) in paragraph at lines 714--719
[]\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields \T1/zi4/m/sl/10 "O
S_type"\T1/ptm/m/n/10 , \T1/zi4/m/sl/10 "License"\T1/ptm/m/n/10 , \T1/zi4/m/sl/
10 "License_is_FOSS"\T1/ptm/m/n/10 ,
[1842] [1843] [1844] [1845] [1846] [1847] [1848] [1849] [1850]
Underfull \hbox (badness 1371) in paragraph at lines 1290--1292
[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/sl/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/sl/10 ccaddress \T1/ptm/m/n/10 to pass to
[1851] [1852] [1853] [1854]
Underfull \hbox (badness 2057) in paragraph at lines 1562--1564
[]\T1/ptm/m/n/10 None for \T1/zi4/m/sl/10 chooseCRANmirror()\T1/ptm/m/n/10 , th
is func-tion is in-voked for its side ef-fect of up-dat-ing
[1855] [1856] [1857]
Underfull \hbox (badness 5189) in paragraph at lines 1747--1749
[]\T1/ptm/m/n/10 A list of keys that have been pre-vi-ously cited, to be used w
hen
[1858] [1859] [1860] [1861]
Underfull \hbox (badness 1661) in paragraph at lines 1962--1969
[]\T1/ptm/m/n/10 logical in-di-cat-ing if the re-sult should be sim-pli-fied to
 an [][]\T1/zi4/m/sl/10 array[][][] \T1/ptm/m/n/10 (typ-i-

Underfull \hbox (badness 1990) in paragraph at lines 1974--1977
[]\T1/ptm/m/n/10 a [][]\T1/zi4/m/sl/10 list[][][] \T1/ptm/m/n/10 or [][]\T1/zi4
/m/sl/10 array[][][]\T1/ptm/m/n/10 , see the \T1/zi4/m/sl/10 simplify \T1/ptm/m
/n/10 ar-gu-ment above. In the lat-ter case, the iden-tity
[1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872]
[1873] [1874] [1875] [1876]
Underfull \hbox (badness 1430) in paragraph at lines 2953--2959
[]\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by
 the \T1/zi4/m/sl/10 quiet \T1/ptm/m/n/10 ar-gu-ment and the

Underfull \hbox (badness 2837) in paragraph at lines 2953--2959
\T1/zi4/m/sl/10 internet.info \T1/ptm/m/n/10 op-tion. The de-tails de-pend on t
he plat-form and scheme, but set-ting
[1877]
Underfull \hbox (badness 1231) in paragraph at lines 2997--3003
[]\T1/ptm/m/n/10 Usernames and pass-words can be set for HTTP proxy trans-fers 
via en-vi-ron-ment vari-able
[1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] [1886] [1887] [1888]
[1889]pdfTeX warning (ext4): destination with the same identifier (name{Rfn.for
mat}) has been already used, duplicate ignored
<to be read again> 
                   \relax 
l.3763 ...mat Unordered and Ordered Lists}{format}
                                                  pdfTeX warning (ext4): destin
ation with the same identifier (name{Rfn.format.1}) has been already used, dupl
icate ignored
<to be read again> 
                   \relax 
l.3763 ...mat Unordered and Ordered Lists}{format}
                                                   [1890] [1891] [1892]
[1893] [1894] [1895] [1896] [1897] [1898] [1899] [1900] [1901] [1902] [1903]
[1904]
Underfull \hbox (badness 1371) in paragraph at lines 4667--4669
[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/sl/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/sl/10 ccaddress \T1/ptm/m/n/10 to pass to
[1905]
Underfull \hbox (badness 1502) in paragraph at lines 4756--4761
[]\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words
'. `Key-

Underfull \hbox (badness 2103) in paragraph at lines 4756--4761
\T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are 
listed in file
[1906] [1907] [1908]
Underfull \hbox (badness 10000) in paragraph at lines 4920--4929
[]\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de
x,
[1909] [1910]
Underfull \hbox (badness 3118) in paragraph at lines 5036--5038
[]\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion `
Lock-ing' in the help for
[1911]
Underfull \hbox (badness 1082) in paragraph at lines 5118--5124
[]\T1/ptm/m/n/10 If \T1/zi4/m/sl/10 repos = NULL\T1/ptm/m/n/10 , a char-ac-ter 
vec-tor of file paths of `\T1/zi4/m/sl/10 .tar.gz\T1/ptm/m/n/10 ' files.
[1912]
Underfull \hbox (badness 1348) in paragraph at lines 5164--5169
[]\T1/ptm/m/n/10 logical in-di-cat-ing to also in-stall unin-stalled pack-ages 
which these pack-

Underfull \hbox (badness 3884) in paragraph at lines 5164--5169
\T1/ptm/m/n/10 ages de-pend on/link to/import/suggest (and so on re-cur-sively)
. Not

Underfull \hbox (badness 1466) in paragraph at lines 5164--5169
\T1/ptm/m/n/10 used if \T1/zi4/m/sl/10 repos = NULL\T1/ptm/m/n/10 . Can also be
 a char-ac-ter vec-tor, a sub-set of

Underfull \hbox (badness 10000) in paragraph at lines 5219--5222
[]\T1/ptm/m/n/10 (not used on Win-dows) anal-o-gous to \T1/zi4/m/sl/10 configur
e.args \T1/ptm/m/n/10 for flag
[1913]
Underfull \hbox (badness 10000) in paragraph at lines 5245--5248
[]\T1/ptm/m/n/10 an op-tional char-ac-ter vec-tor of ad-di-tional op-tion(s) to
 be passed

Underfull \hbox (badness 10000) in paragraph at lines 5245--5248
\T1/ptm/m/n/10 to \T1/zi4/m/sl/10 R CMD INSTALL \T1/ptm/m/n/10 for a source pac
k-age in-stall. E.g.,
[1914]
Underfull \hbox (badness 10000) in paragraph at lines 5375--5380
[][][]\T1/zi4/m/sl/10 update.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10
 available.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 download.packages
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 installed.packages[][][]\T1/ptm/m/n/
10 ,
[1915] [1916] [1917] [1918] [1919] [1920] [1921] [1922] [1923] [1924] [1925]
[1926] [1927] [1928] [1929] [1930] [1931] [1932] [1933]
Underfull \hbox (badness 10000) in paragraph at lines 6529--6531
[]\T1/zi4/m/sl/10 packageVersion() \T1/ptm/m/n/10 is a con-ve-nience short-cut,
 al-low-ing things like

Underfull \hbox (badness 2310) in paragraph at lines 6534--6539
[]\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the
 given pack-age is found and can suc-cess-fully be read,
[1934] [1935] [1936]
Underfull \hbox (badness 10000) in paragraph at lines 6691--6694
[]\T1/ptm/m/n/10 a data frame with columns as the \T1/ptm/m/it/10 ma-trix \T1/p
tm/m/n/10 re-turned by

Underfull \hbox (badness 10000) in paragraph at lines 6691--6694
[][]\T1/zi4/m/sl/10 available.packages[][][] \T1/ptm/m/n/10 plus \T1/zi4/m/sl/1
0 "Status"\T1/ptm/m/n/10 , a fac-tor with lev-els
[1937] [1938] [1939] [1940] [1941] [1942]
Underfull \hbox (badness 1789) in paragraph at lines 7072--7074
[]\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for
 more dis-cus-sion of the
[1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953]
[1954]
Underfull \hbox (badness 1097) in paragraph at lines 7871--7874
[]\T1/ptm/m/n/10 The name \T1/zi4/m/sl/10 "clipboard" \T1/ptm/m/n/10 may also b
e used on Win-dows, in which case
[1955] [1956]
Underfull \hbox (badness 3000) in paragraph at lines 7999--8004
[][][]\T1/zi4/m/sl/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/sl/10 read.t
able[][][]\T1/ptm/m/n/10 ;
[1957] [1958] [1959] [1960] [1961] [1962] [1963] [1964]
Underfull \hbox (badness 2134) in paragraph at lines 8561--8566
[][][]\T1/zi4/m/sl/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/sl/10 write.
table[][][]\T1/ptm/m/n/10 ;
[1965] [1966] [1967] [1968] [1969] [1970] [1971] [1972] [1973] [1974] [1975]
[1976] [1977] [1978] [1979] [1980]
Underfull \hbox (badness 10000) in paragraph at lines 9504--9506
[][][]$\T1/zi4/m/sl/10 http : / / en . wikipedia . org / wiki / Ctags$[][]\T1/p
tm/m/n/10 , [][]$\T1/zi4/m/sl/10 http : / / www . gnu . org / software / emacs 
/
[1981] [1982]
Underfull \hbox (badness 10000) in paragraph at lines 9682--9686
[]\T1/ptm/m/n/10 The de-fault for \T1/zi4/m/sl/10 stylepath \T1/ptm/m/n/10 is n
ow taken from the en-vi-ron-ment vari-able
[1983]
Underfull \hbox (badness 10000) in paragraph at lines 9713--9719
[]\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y
ou can add a
[1984]
Underfull \hbox (badness 2096) in paragraph at lines 9827--9830
[]\T1/ptm/m/n/10 logical (\T1/zi4/m/sl/10 FALSE\T1/ptm/m/n/10 ), in-di-cat-ing 
whether PNG fig-ures should be gen-er-ated. Ig-nored if

Underfull \hbox (badness 1527) in paragraph at lines 9831--9834
[]\T1/ptm/m/n/10 logical (\T1/zi4/m/sl/10 FALSE\T1/ptm/m/n/10 ), in-di-cat-ing 
whether JPEG fig-ures should be gen-er-ated. Ig-nored if
[1985]
Underfull \hbox (badness 1009) in paragraph at lines 9898--9909
[]\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func-
tions can be ex-e-cuted. If
[1986] [1987] [1988] [1989] [1990]
Underfull \hbox (badness 2635) in paragraph at lines 10204--10207
[]\T1/ptm/m/n/10 Repository `\T1/zi4/m/sl/10 CRAN\T1/ptm/m/n/10 ' is treated sp
e-cially: the value is taken from the cur-rent set-ting of
[1991] [1992] [1993] [1994] [1995] [1996]
Underfull \hbox (badness 5970) in paragraph at lines 10572--10575
[]\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t
ive

Underfull \hbox (badness 3449) in paragraph at lines 10583--10592
[]\T1/ptm/m/n/10 string in-di-cat-ing if the \T1/zi4/m/sl/10 width \T1/ptm/m/n/
10 ar-gu-ment's spec-i-fi-ca-tion should be fol-

Underfull \hbox (badness 2512) in paragraph at lines 10583--10592
\T1/ptm/m/n/10 lowed strictly, one of the val-ues \T1/zi4/m/sl/10 c("no", "cut"
, "wrap")\T1/ptm/m/n/10 . De-

Underfull \hbox (badness 1824) in paragraph at lines 10583--10592
\T1/ptm/m/n/10 faults to the \T1/zi4/m/sl/10 strict.width \T1/ptm/m/n/10 com-po
-nent of op-tion \T1/zi4/m/sl/10 "str" \T1/ptm/m/n/10 (see [][]\T1/zi4/m/sl/10 
options[][][]\T1/ptm/m/n/10 )

Underfull \hbox (badness 3769) in paragraph at lines 10583--10592
\T1/ptm/m/n/10 which de-faults to \T1/zi4/m/sl/10 "no" \T1/ptm/m/n/10 for back 
com-pat-i-bil-ity rea-sons; \T1/zi4/m/sl/10 "wrap" \T1/ptm/m/n/10 uses
[1997] [1998] [1999]
Underfull \hbox (badness 10000) in paragraph at lines 10751--10753
[]\T1/ptm/m/n/10 Options other than \T1/zi4/m/sl/10 memory = "none" \T1/ptm/m/n
/10 ap-ply only to files pro-duced by
[2000] [2001] [2002] [2003] [2004] [2005]
Underfull \hbox (badness 10000) in paragraph at lines 11146--11149
[][][]$\T1/zi4/m/sl/10 http : / / en . wikipedia . org / wiki / Tar _ (file _ f
ormat)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 http : / / pubs . opengroup . 
org /

Underfull \hbox (badness 2245) in paragraph at lines 11146--11149
\T1/zi4/m/sl/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9
2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX
[2006] [2007] [2008] [2009] [2010] [2011] [2012] [2013]
Underfull \hbox (badness 10000) in paragraph at lines 11651--11653
[]\T1/ptm/m/n/10 Arguments such as \T1/zi4/m/sl/10 destdir \T1/ptm/m/n/10 and \
T1/zi4/m/sl/10 dependencies \T1/ptm/m/n/10 to be passed to
[2014]
Underfull \hbox (badness 1052) in paragraph at lines 11654--11656
[]\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and
 in-stall. See

Underfull \hbox (badness 10000) in paragraph at lines 11684--11689
[]\T1/ptm/m/n/10 For how the list of suit-able avail-able pack-ages is de-ter-m
ined see

Underfull \hbox (badness 10000) in paragraph at lines 11684--11689
[][]\T1/zi4/m/sl/10 available.packages[][][]\T1/ptm/m/n/10 . \T1/zi4/m/sl/10 av
ailable = NULL \T1/ptm/m/n/10 make a call to

Underfull \hbox (badness 10000) in paragraph at lines 11713--11716
[][][]\T1/zi4/m/sl/10 install.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/1
0 available.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 download.package
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[][][]\T1/zi4/m/n/10 I[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 plot.data.frame
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 print.data.frame[][][]\T1/ptm/m/n/10 
, [][]\T1/zi4/m/n/10 row.names[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 names[]
[][] \T1/ptm/m/n/10 (for the col-umn names),

Underfull \hbox (badness 2469) in paragraph at lines 7239--7248
[][]\T1/zi4/m/n/10 [.data.frame[][][] \T1/ptm/m/n/10 for sub-set-ting meth-ods,
 [][]\T1/zi4/m/n/10 Math.data.frame[][][] \T1/ptm/m/n/10 etc, about \T1/ptm/m/i
t/10 Group \T1/ptm/m/n/10 meth-ods for
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Underfull \hbox (badness 1394) in paragraph at lines 8773--8778
[]\T1/ptm/m/n/10 Subtraction of date-time ob-jects gives an ob-ject of this cla
ss, by call-ing \T1/zi4/m/n/10 difftime \T1/ptm/m/n/10 with
[139] [140] [141] [142] [143] [144] [145]
Underfull \hbox (badness 10000) in paragraph at lines 9216--9220
[][][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki / IEEE _ 754-[]198
5$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wi
ki / IEEE _
[146] [147] [148] [149] [150] [151]
Underfull \hbox (badness 2150) in paragraph at lines 9599--9602
[]\T1/ptm/m/n/10 logical in-di-cat-ing if du-pli-ca-tion should be con-sid-ered
 from the re-verse

Underfull \hbox (badness 6396) in paragraph at lines 9613--9621
[]\T1/ptm/m/n/10 For the de-fault meth-ods, and when-ever there are equiv-a-len
t method def-i-ni-tions for

Underfull \hbox (badness 2409) in paragraph at lines 9654--9660
[]\T1/ptm/m/n/10 Except for fac-tors, log-i-cal and raw vec-tors the de-fault \
T1/zi4/m/n/10 nmax = NA \T1/ptm/m/n/10 is equiv-a-lent to
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[164] [165] [166]
Underfull \hbox (badness 4569) in paragraph at lines 10683--10687
[]\T1/ptm/m/n/10 When eval-u-at-ing ex-pres-sions in a data frame that has been
 passed as an ar-gu-ment

Underfull \hbox (badness 2401) in paragraph at lines 10683--10687
\T1/ptm/m/n/10 to a func-tion, the rel-e-vant en-clo-sure is of-ten the caller'
s en-vi-ron-ment, i.e., one needs
[167]
Underfull \vbox (badness 3803) has occurred while \output is active [168]
[169] [170] [171] [172] [173] [174]
Underfull \hbox (badness 2698) in paragraph at lines 11227--11236
[]\T1/ptm/m/n/10 Both \T1/zi4/m/n/10 $ \T1/ptm/m/n/10 and \T1/zi4/m/n/10 [[ \T1
/ptm/m/n/10 can be ap-plied to en-vi-ron-ments. Only char-ac-ter in-dices are a
l-lowed

Underfull \hbox (badness 4341) in paragraph at lines 11227--11236
\T1/ptm/m/n/10 and no par-tial match-ing is done. The se-man-tics of these op-e
r-a-tions are those of
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[187] [188] [189]
Underfull \hbox (badness 2253) in paragraph at lines 12174--12176
[]\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is
 done: see
[190]
Underfull \hbox (badness 1565) in paragraph at lines 12235--12239
[][][]\T1/zi4/m/n/10 Sys.readlink[][][] \T1/ptm/m/n/10 to find out about sym-bo
lic links, [][]\T1/zi4/m/n/10 files[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 fi
le.access[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files[][][]\T1/ptm/m/n/
10 , and
[191]
Underfull \hbox (badness 10000) in paragraph at lines 12278--12280
[]\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as \T1/zi4/m
/n/10 PATH \T1/ptm/m/n/10 and \T1/zi4/m/n/10 R_LIBS \T1/ptm/m/n/10 with
[192] [193]
Underfull \hbox (badness 1466) in paragraph at lines 12409--12412
[]\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For \T1/
zi4/m/n/10 file.copy \T1/ptm/m/n/10 and
[194]
Underfull \hbox (badness 10000) in paragraph at lines 12515--12519
[][][]\T1/zi4/m/n/10 file.info[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.ac
cess[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 file.path[][][]\T1/ptm/m/n/10 , [
][]\T1/zi4/m/n/10 file.show[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 list.files
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 unlink[][][]\T1/ptm/m/n/10 , [][]\T1/
zi4/m/n/10 basename[][][]\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 12526--12529
[][][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki / Hard _ link$[][]
 \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki 
/
[195] [196] [197] [198]
Underfull \hbox (badness 3965) in paragraph at lines 12773--12777
[]\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr
i-bu-tion func-tion, and in-deed,
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Underfull \hbox (badness 4429) in paragraph at lines 13481--13484
[]\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][]
\T1/zi4/m/n/10 complex[][][] \T1/ptm/m/n/10 only for
[210]
Underfull \hbox (badness 10000) in paragraph at lines 13567--13569
[]\T1/ptm/m/n/10 If you set \T1/zi4/m/n/10 format \T1/ptm/m/n/10 it over-rides 
the set-ting of \T1/zi4/m/n/10 mode\T1/ptm/m/n/10 , so

Underfull \hbox (badness 10000) in paragraph at lines 13573--13577
[]\T1/zi4/m/n/10 formatC \T1/ptm/m/n/10 does not nec-es-sar-ily align the num-b
ers on the dec-i-mal point, so
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Underfull \vbox (badness 3803) has occurred while \output is active [213]
[214] [215] [216] [217] [218] [219] [220] [221] [222] [223]
Underfull \hbox (badness 1092) in paragraph at lines 14330--14335
[][]\T1/zi4/m/n/10 library.dynam[][][]\T1/ptm/m/n/10 , or can be found af-ter t
he DLL has been loaded us-ing
[224] [225] [226] [227]
Underfull \hbox (badness 6741) in paragraph at lines 14578--14582
\T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing \
T1/zi4/m/n/10 CRoutine\T1/ptm/m/n/10 , \T1/zi4/m/n/10 CallRoutine\T1/ptm/m/n/10
 ,
[228] [229] [230] [231]
Underfull \hbox (badness 1867) in paragraph at lines 14876--14883
[]\T1/ptm/m/n/10 character string con-tain-ing a [][]reg-u-lar ex-pres-sion[][]
[] (or char-ac-ter string for
[232] [233] [234] [235]
Underfull \vbox (badness 10000) has occurred while \output is active [236]
[237]
Underfull \hbox (badness 3679) in paragraph at lines 15240--15242
[]\T1/ptm/m/n/10 The TRE li-brary of Ville Lau-rikari ([][]$\T1/zi4/m/n/10 http
 : / / laurikari . net / tre/$[][]\T1/ptm/m/n/10 ) is used ex-cept for
[238] [239] [240] [241] [242] [243]
Underfull \hbox (badness 1478) in paragraph at lines 15708--15711
[]\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha
r-ac-ter vec-tor
[244] [245] [246] [247] [248] [249] [250] [251] [252] [253] [254]
Underfull \hbox (badness 1442) in paragraph at lines 16391--16393
[]\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed 
and by [][]\T1/zi4/m/n/10 dev.new[][][]\T1/ptm/m/n/10 : see
[255]
Underfull \hbox (badness 2452) in paragraph at lines 16483--16499
[][][]\T1/zi4/m/n/10 as.character[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.c
omplex[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.double[][][]\T1/ptm/m/n/10 ,
 [][]\T1/zi4/m/n/10 as.integer[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.logi
cal[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 as.raw[][][]\T1/ptm/m/n/10 , [][]\
T1/zi4/m/n/10 as.vector[][][]\T1/ptm/m/n/10 ,
[256] [257] [258] [259] [260] [261] [262] [263] [264] [265] [266]
Underfull \hbox (badness 4739) in paragraph at lines 17130--17132
[]\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere
d, see
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[279] [280]
Underfull \hbox (badness 10000) in paragraph at lines 18012--18016
[]\T1/ptm/m/n/10 By de-fault \T1/zi4/m/n/10 R_LIBS \T1/ptm/m/n/10 is un-set, an
d \T1/zi4/m/n/10 R_LIBS_USER \T1/ptm/m/n/10 is set to di-rec-tory

Underfull \hbox (badness 2460) in paragraph at lines 18012--18016
\T1/ptm/m/n/10 `\T1/zi4/m/n/10 R/\T1/ptm/m/sl/10 R.version$platform\T1/zi4/m/n/
10 -library/\T1/ptm/m/sl/10 x.y\T1/ptm/m/n/10 ' of the home di-rec-tory (or `\T
1/zi4/m/n/10 Library/R/\T1/ptm/m/sl/10 x.y\T1/zi4/m/n/10 /library\T1/ptm/m/n/10
 '
[281] [282]
Underfull \hbox (badness 1014) in paragraph at lines 18165--18170
[]\T1/ptm/m/n/10 Normally \T1/zi4/m/n/10 library \T1/ptm/m/n/10 re-turns (in-vi
s-i-bly) the list of at-tached pack-ages, but \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/1
0 or \T1/zi4/m/n/10 FALSE \T1/ptm/m/n/10 if
[283] [284] [285] [286] [287] [288] [289] [290] [291] [292] [293]
Underfull \hbox (badness 1264) in paragraph at lines 18872--18877
[]\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways 
be sup-ported:
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Underfull \hbox (badness 10000) in paragraph at lines 19606--19608
[]\T1/ptm/m/n/10 The al-go-rithm used by \T1/zi4/m/n/10 make.unique \T1/ptm/m/n
/10 has the prop-erty that
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[318] [319] [320] [321]
Underfull \hbox (badness 1655) in paragraph at lines 20594--20600
[][][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org / wiki / Data _ compressi
on$[][] \T1/ptm/m/n/10 for back-ground on data com-pres-sion,
[322] [323]
Underfull \hbox (badness 1484) in paragraph at lines 20755--20763
[]\T1/ptm/m/n/10 The address-space limit is 2Gb un-der 32-bit Win-dows un-less 
the OS's de-fault has been
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Underfull \hbox (badness 2790) in paragraph at lines 21022--21025
[]\T1/zi4/m/n/10 packageStartupMessage \T1/ptm/m/n/10 is a vari-ant whose mes-s
ages can be sup-pressed sep-a-rately by

Underfull \hbox (badness 1571) in paragraph at lines 21022--21025
\T1/zi4/m/n/10 suppressPackageStartupMessages\T1/ptm/m/n/10 . (They are still m
es-sages, so can be sup-pressed by
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Underfull \hbox (badness 10000) in paragraph at lines 21461--21464
[]\T1/ptm/m/n/10 It is pos-si-ble to up-date just part of the names at-tribute 
via the gen-eral rules:

Underfull \hbox (badness 10000) in paragraph at lines 21461--21464
\T1/ptm/m/n/10 see the ex-am-ples. This works be-cause the ex-pres-sion there i
s eval-u-ated as
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[347] [348] [349] [350] [351]
Underfull \hbox (badness 1199) in paragraph at lines 22508--22514
[]\T1/ptm/m/n/10 The de-fault method for \T1/zi4/m/n/10 is.numeric \T1/ptm/m/n/
10 re-turns \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/10 if its ar-gu-ment is of [][]mode
[][][] \T1/zi4/m/n/10 "numeric"

Underfull \hbox (badness 2027) in paragraph at lines 22508--22514
\T1/ptm/m/n/10 ([][]type[][][] \T1/zi4/m/n/10 "double" \T1/ptm/m/n/10 or type \
T1/zi4/m/n/10 "integer"\T1/ptm/m/n/10 ) and not a fac-tor, and \T1/zi4/m/n/10 F
ALSE \T1/ptm/m/n/10 oth-er-wise. That is,
[352] [353] [354] [355] [356] [357] [358] [359]
Underfull \hbox (badness 1038) in paragraph at lines 23037--23046
[]\T1/ptm/m/n/10 the pack-ages that are at-tached by de-fault when \T1/phv/m/n/
10 R \T1/ptm/m/n/10 starts up. Ini-tially

Underfull \hbox (badness 1881) in paragraph at lines 23047--23050
[]\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str
ucts which are

Underfull \hbox (badness 6220) in paragraph at lines 23066--23068
[]\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see

[360]
Underfull \hbox (badness 10000) in paragraph at lines 23130--23139
[]\T1/ptm/m/n/10 the com-mand used for dis-play-ing text files by [][]\T1/zi4/m
/n/10 file.show[][][]\T1/ptm/m/n/10 . De-faults to

Underfull \hbox (badness 2600) in paragraph at lines 23130--23139
\T1/ptm/m/n/10 `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /bin/pager\T1/pt
m/m/n/10 ', which se-lects a pager via the \T1/zi4/m/n/10 PAGER \T1/ptm/m/n/10 
en-vi-ron-ment vari-able

Underfull \hbox (badness 2142) in paragraph at lines 23140--23146
[]\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][]\T1/zi4/m/n/10 postscr
ipt[][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able

Underfull \hbox (badness 1968) in paragraph at lines 23153--23158
[]\T1/ptm/m/n/10 the com-mand used by [][]\T1/zi4/m/n/10 postscript[][][] \T1/p
tm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able

Underfull \hbox (badness 10000) in paragraph at lines 23163--23172
[]\T1/ptm/m/n/10 Used for the readline-based ter-mi-nal in-ter-face. De-fault v
alue
[361] [362] [363]
Underfull \hbox (badness 10000) in paragraph at lines 23404--23410
[]\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][]\T1/zi4/m/
n/10 setRepositories[][][]\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 23404--23410
\T1/ptm/m/n/10 e.g. the de-fault `\T1/zi4/m/n/10 "http://www.bioconductor.org"\
T1/ptm/m/n/10 ' or the Eu-ro-pean mir-

Underfull \hbox (badness 10000) in paragraph at lines 23404--23410
\T1/ptm/m/n/10 ror `\T1/zi4/m/n/10 "http://bioconductor.statistik.tu-dortmund.d
e"\T1/ptm/m/n/10 '. Can be set by

Underfull \hbox (badness 10000) in paragraph at lines 23416--23419
[]\T1/ptm/m/n/10 default Cc: ad-dress used by [][]\T1/zi4/m/n/10 create.post[][
][] \T1/ptm/m/n/10 (and hence[][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/n/10
 and

Underfull \hbox (badness 2689) in paragraph at lines 23441--23443
[]\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na
l HTTP server, see
[364]
Underfull \hbox (badness 7203) in paragraph at lines 23469--23472
[]\T1/ptm/m/n/10 default email-ing method used by [][]\T1/zi4/m/n/10 create.pos
t[][][] \T1/ptm/m/n/10 and hence [][]\T1/zi4/m/n/10 bug.report[][][] \T1/ptm/m/
n/10 and

Underfull \hbox (badness 3128) in paragraph at lines 23479--23485
\T1/ptm/m/n/10 Pos-si-ble val-ues are \T1/zi4/m/n/10 "source" \T1/ptm/m/n/10 (t
he de-fault ex-cept un-der the CRAN OS X build)

Underfull \hbox (badness 1881) in paragraph at lines 23479--23485
\T1/ptm/m/n/10 and \T1/zi4/m/n/10 "mac.binary."\T1/ptm/m/n/10 . Win-dows uses \
T1/zi4/m/n/10 "win.binary"\T1/ptm/m/n/10 . (\T1/zi4/m/n/10 "mac.binary.leopard"
 \T1/ptm/m/n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 23487--23494
[]\T1/ptm/m/n/10 URLs of the repos-i-to-ries for use by [][]\T1/zi4/m/n/10 upda
te.packages[][][]\T1/ptm/m/n/10 . De-faults to

Underfull \hbox (badness 10000) in paragraph at lines 23487--23494
\T1/zi4/m/n/10 c(CRAN="@CRAN@")\T1/ptm/m/n/10 , a value that causes some util-i
-ties to prompt for a

Underfull \hbox (badness 6380) in paragraph at lines 23487--23494
\T1/ptm/m/n/10 CRAN mir-ror. To avoid this do set the CRAN mir-ror, by some-thi
ng like

Underfull \hbox (badness 1082) in paragraph at lines 23487--23494
\T1/zi4/m/n/10 local({r <- getOption("repos"); r["CRAN"] <- "http://my.local.cr
an";
[365] [366] [367] [368]
Underfull \vbox (badness 3803) has occurred while \output is active [369]
Underfull \hbox (badness 10000) in paragraph at lines 23795--23799
[]\T1/ptm/m/n/10 The outer prod-uct of the ar-rays \T1/zi4/m/n/10 X \T1/ptm/m/n
/10 and \T1/zi4/m/n/10 Y \T1/ptm/m/n/10 is the ar-ray \T1/zi4/m/n/10 A \T1/ptm/
m/n/10 with di-men-sion

Underfull \hbox (badness 10000) in paragraph at lines 23795--23799
\T1/zi4/m/n/10 c(dim(X), dim(Y)) \T1/ptm/m/n/10 where el-e-ment \T1/zi4/m/n/10 
A[c(arrayindex.x, arrayindex.y)]
[370] [371] [372] [373] [374]
Underfull \hbox (badness 1748) in paragraph at lines 24116--24120
\T1/ptm/m/n/10 seem un-de-sir-able, e.g., when past-ing two char-ac-ter vec-tor
s, or very de-sir-able, e.g. in
[375] [376] [377] [378] [379] [380] [381] [382]
Underfull \hbox (badness 2726) in paragraph at lines 24615--24618
[]\T1/ptm/m/n/10 character string (or \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 ) in-di
-cat-ing [][]\T1/zi4/m/n/10 NA[][][] \T1/ptm/m/n/10 val-ues in printed out-put,
 see
[383] [384] [385] [386] [387] [388] [389] [390] [391] [392] [393] [394]
[395]
Underfull \hbox (badness 1052) in paragraph at lines 25420--25425
[]\T1/zi4/m/n/10 qr.X \T1/ptm/m/n/10 re-turns $\OML/cmm/b/it/10 X$\T1/ptm/m/n/1
0 , the orig-i-nal ma-trix from which the qr ob-ject was con-structed, pro-vide
d
[396] [397] [398] [399] [400] [401] [402] [403] [404] [405]
Underfull \hbox (badness 1533) in paragraph at lines 26125--26128
[]\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca
n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the
[406] [407] [408] [409] [410] [411] [412] [413] [414] [415] [416] [417]
[418] [419] [420] [421] [422] [423] [424] [425] [426] [427] [428] [429]
[430] [431]
Underfull \hbox (badness 10000) in paragraph at lines 27753--27757
[]\T1/zi4/m/n/10 regexpr \T1/ptm/m/n/10 and \T1/zi4/m/n/10 gregexpr \T1/ptm/m/n
/10 sup-port `named cap-ture'. If groups are named, e.g.,

Underfull \hbox (badness 1221) in paragraph at lines 27753--27757
\T1/zi4/m/n/10 "(?<first>[A-Z][a-z]+)" \T1/ptm/m/n/10 then the po-si-tions of t
he matches are also re-turned by name.

Underfull \hbox (badness 6188) in paragraph at lines 27776--27778
[]\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 http : / / p
ubs . opengroup . org / onlinepubs / 9699919799 /
[432] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] [443]
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Underfull \hbox (badness 10000) in paragraph at lines 28975--28978
[]\T1/zi4/m/n/10 save.image() \T1/ptm/m/n/10 is just a short-cut for `save my c
ur-rent workspace', i.e.,
[451] [452] [453] [454]
Underfull \hbox (badness 2302) in paragraph at lines 29175--29182
[]\T1/ptm/m/n/10 The root-mean-square for a (pos-si-bly cen-tered) col-umn is d
e-fined as $[]$,

Underfull \hbox (badness 2837) in paragraph at lines 29175--29182
\T1/ptm/m/n/10 where $\OML/cmm/m/it/10 x$ \T1/ptm/m/n/10 is a vec-tor of the no
n-missing val-ues and $\OML/cmm/m/it/10 n$ \T1/ptm/m/n/10 is the num-ber of non
-missing

Underfull \hbox (badness 2980) in paragraph at lines 29175--29182
\T1/ptm/m/n/10 val-ues. In the case \T1/zi4/m/n/10 center = TRUE\T1/ptm/m/n/10 
, this is the same as the stan-dard de-vi-a-tion,

Underfull \hbox (badness 2181) in paragraph at lines 29175--29182
\T1/ptm/m/n/10 but in gen-eral it is not. (To scale by the stan-dard de-vi-a-ti
ons with-out cen-ter-ing, use
[455] [456]
Underfull \hbox (badness 2261) in paragraph at lines 29328--29333
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 strip.white \T1/ptm/m/n/10 is of length 1, i
t ap-plies to all fields; oth-er-wise, if

Underfull \hbox (badness 10000) in paragraph at lines 29355--29361
[]\T1/ptm/m/n/10 The es-capes which are in-ter-preted are the con-trol char-ac-
ters
[457]
Underfull \hbox (badness 10000) in paragraph at lines 29428--29433
[]\T1/ptm/m/n/10 Note that since \T1/zi4/m/n/10 sep \T1/ptm/m/n/10 is a sep-a-r
a-tor and not a ter-mi-na-tor, read-ing a file by
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Underfull \hbox (badness 1072) in paragraph at lines 32177--32181
[]\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea
d from the file spec-i-fied by

Underfull \hbox (badness 10000) in paragraph at lines 32182--32186
[]\T1/ptm/m/n/10 The command-line op-tion `\T1/zi4/m/n/10 --vanilla\T1/ptm/m/n/
10 ' im-plies `\T1/zi4/m/n/10 --no-site-file\T1/ptm/m/n/10 ', `\T1/zi4/m/n/10 -
-no-init-file\T1/ptm/m/n/10 ',

Underfull \hbox (badness 10000) in paragraph at lines 32210--32216
[]\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file
s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 '

Underfull \hbox (badness 10000) in paragraph at lines 32210--32216
\T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for
 first in architecture-specific di-rec-to-ries, e.g.

Underfull \hbox (badness 3343) in paragraph at lines 32223--32230
\T1/ptm/m/n/10 early in the start-up pro-cess-ing. It con-tains en-vi-ron-ment 
vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the

Underfull \hbox (badness 2573) in paragraph at lines 32223--32230
\T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i
n site or user en-vi-ron-ment

Underfull \hbox (badness 1917) in paragraph at lines 32223--32230
\T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/
n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from
[501] [502] [503] [504] [505]
Underfull \hbox (badness 10000) in paragraph at lines 32513--32519
[]\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the \T1/zi4/m/n/10 form
at \T1/ptm/m/n/10 meth-ods is
[506] [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517]
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Underfull \vbox (badness 10000) has occurred while \output is active [529]
[530]
Underfull \hbox (badness 4416) in paragraph at lines 34070--34072
[]\T1/ptm/m/n/10 Argument \T1/zi4/m/n/10 names \T1/ptm/m/n/10 was in-tro-duced 
in \T1/phv/m/n/10 R \T1/ptm/m/n/10 2.13.0 to avoid need-ing the com-mon use of
[531]
Underfull \hbox (badness 3333) in paragraph at lines 34167--34172
[]\T1/ptm/m/n/10 If a file-name starts with \T1/zi4/m/n/10 . \T1/ptm/m/n/10 thi
s may need to be matched ex-plic-itly: for ex-am-ple
[532] [533] [534] [535] [536] [537] [538] [539] [540] [541]
Underfull \hbox (badness 1472) in paragraph at lines 34774--34777
[]\T1/ptm/m/n/10 logical. If \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , func-tions kee
p their source in-clud-ing com-ments, see
[542] [543] [544] [545] [546] [547] [548] [549] [550] [551]
Underfull \hbox (badness 2671) in paragraph at lines 35431--35434
[]\T1/ptm/m/n/10 levels to re-move for all fac-tors in \T1/zi4/m/n/10 ...\T1/pt
m/m/n/10 . If set to \T1/zi4/m/n/10 NULL\T1/ptm/m/n/10 , it im-plies
[552] [553] [554] [555] [556] [557]
Underfull \hbox (badness 10000) in paragraph at lines 35829--35832
[][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [
][]$http : / / developer . r-[]project . org /
[558] [559]
Underfull \hbox (badness 10000) in paragraph at lines 35950--35954
[][][]\T1/zi4/m/n/10 addTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 r
emoveTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 getTaskCallbackNames
[][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 http : / / developer .
[560]
Underfull \hbox (badness 10000) in paragraph at lines 36012--36016
[][][]\T1/zi4/m/n/10 addTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 r
emoveTaskCallback[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 taskCallbackManager[
][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 http : / / developer .
[561] [562] [563] [564] [565] [566] [567] [568] [569] [570] [571] [572]
[573] [574] [575] [576] [577] [578]
Underfull \hbox (badness 1990) in paragraph at lines 37137--37145
[]\T1/zi4/m/n/10 try \T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any e
r-rors that oc-cur dur-ing the eval-u-a-tion. If

Underfull \hbox (badness 4846) in paragraph at lines 37137--37145
\T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][
]\T1/zi4/m/n/10 stderr[][][] \T1/ptm/m/n/10 con-nec-tion un-less
[579] [580] [581] [582]
Underfull \hbox (badness 1515) in paragraph at lines 37406--37411
[]\T1/ptm/m/n/10 On most plat-forms `file' in-cludes sym-bolic links, fi-fos an
d sock-ets. Prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 2.15.0
[583] [584] [585]
Underfull \hbox (badness 1917) in paragraph at lines 37636--37643
[]\T1/ptm/m/n/10 When a func-tion call-ing \T1/zi4/m/n/10 UseMethod("fun") \T1/
ptm/m/n/10 is ap-plied to an ob-ject with class at-tribute
[586] [587] [588] [589] [590] [591] [592] [593] [594]
Underfull \hbox (badness 3668) in paragraph at lines 38203--38205
[]\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di-
ately, even if
[595] [596]
Underfull \hbox (badness 2401) in paragraph at lines 38304--38308
[]\T1/ptm/m/n/10 See the de-scrip-tion of [][]\T1/zi4/m/n/10 options[][][]("war
n") \T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a
[597] [598] [599]
Underfull \hbox (badness 6542) in paragraph at lines 38481--38486
[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 arr.ind == TRUE \T1/ptm/m/n/10 and \T1/zi4/m
/n/10 x \T1/ptm/m/n/10 is an [][]\T1/zi4/m/n/10 array[][][] \T1/ptm/m/n/10 (has
 a [][]\T1/zi4/m/n/10 dim[][][] \T1/ptm/m/n/10 at-tribute), the re-sult is
[600] [601] [602]
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[604] [605] [606]
Underfull \hbox (badness 10000) in paragraph at lines 38909--38914
[]\T1/ptm/m/n/10 This is a spe-cial case of rank-ing, but as a less gen-eral fu
nc-tion than [][]\T1/zi4/m/n/10 rank[][][]

Underfull \hbox (badness 10000) in paragraph at lines 38909--38914
\T1/ptm/m/n/10 is more suit-able to be made generic. The de-fault method is sim
-i-lar to
[607]
Underfull \hbox (badness 5417) in paragraph at lines 38999--39003
[]\T1/zi4/m/n/10 .packages() \T1/ptm/m/n/10 re-turns the names of the cur-rentl
y at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas
[608]
Underfull \hbox (badness 10000) in paragraph at lines 39060--39064
[]\T1/zi4/m/n/10 .standard_regexps \T1/ptm/m/n/10 re-turns a list of `stan-dard
' reg-exps, in-clud-ing el-e-ments named
[609] [610]) (./compiler-pkg.tex
Chapter 2.
[611] [612] [613] [614]) (./datasets-pkg.tex
Chapter 3.

Underfull \hbox (badness 10000) in paragraph at lines 12--14
[]\T1/ptm/m/n/10 This pack-age con-tains a va-ri-ety of datasets. For a com-ple
te list, use
[615] [616] [617] [618] [619] [620] [621] [622] [623] [624] [625] [626]
[627] [628] [629] [630] [631] [632] [633] [634] [635] [636] [637] [638]
[639] [640] [641] [642] [643] [644] [645] [646] [647] [648] [649] [650]
[651] [652] [653] [654] [655] [656] [657] [658] [659] [660] [661]
Underfull \vbox (badness 10000) has occurred while \output is active [662]
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[675] [676] [677] [678] [679] [680]
Underfull \hbox (badness 1325) in paragraph at lines 3873--3876
[]\T1/ptm/m/n/10 For back-ground on Bristle-cone pines and Methuse-lah Walk, se
e [][]$\T1/zi4/m/n/10 http : / / www . sonic . net /
[681]
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[683] [684] [685]
Underfull \vbox (badness 10000) has occurred while \output is active [686]
Underfull \vbox (badness 10000) has occurred while \output is active [687]
[688] [689] [690] [691] [692] [693] [694]) (./grDevices-pkg.tex
Chapter 4.
[695] [696] [697] [698] [699] [700] [701] [702] [703] [704] [705] [706]
[707] [708] [709] [710] [711]
Underfull \hbox (badness 5175) in paragraph at lines 1048--1050
[]\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm
. The source code is in
[712] [713] [714]
Underfull \hbox (badness 1852) in paragraph at lines 1245--1248
[]\T1/zi4/m/n/10 densCols \T1/ptm/m/n/10 com-putes and re-turns the set of col-
ors that will be used in plot-ting, call-ing
[715] [716] [717]
Underfull \hbox (badness 1490) in paragraph at lines 1448--1453
\T1/ptm/m/n/10 by [][]\T1/zi4/m/n/10 rasterImage[][][] \T1/ptm/m/n/10 and [][]\
T1/zi4/m/n/10 grid.raster[][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues \T1/zi4/m/n/
10 "no"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "yes" \T1/ptm/m/n/10 and
[718]
Underfull \hbox (badness 2698) in paragraph at lines 1502--1505
[]\T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 if the de-vice does not sup-port cap-ture,
 oth-er-wise a ma-trix of color names (for
[719]
Underfull \hbox (badness 10000) in paragraph at lines 1571--1575
[]\T1/ptm/m/n/10 logical; if \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , the func-tion 
also re-turns \T1/zi4/m/n/10 TRUE \T1/ptm/m/n/10 when
[720] [721] [722] [723] [724]
Underfull \hbox (badness 1033) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "pgnm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pgnmraw"\T1/ptm/m/n/10 , 
\T1/zi4/m/n/10 "pnm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pnmraw"\T1/ptm/m/n/10 , \T
1/zi4/m/n/10 "ppm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "ppmraw"\T1/ptm/m/n/10 , \T1/
zi4/m/n/10 "pkm"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pkmraw"\T1/ptm/m/n/10 , \T1/zi
4/m/n/10 "tiffcrle"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3758) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "tiffg3"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "tiffg32d"\T1/ptm/m/n/10
 , \T1/zi4/m/n/10 "tiffg4"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "tifflzw"\T1/ptm/m/n/
10 , \T1/zi4/m/n/10 "tiffpack"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "tiff12nc"\T1/ptm
/m/n/10 , \T1/zi4/m/n/10 "tiff24nc"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 3128) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "tiff32nc" "psmono"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "psgray"\T1/p
tm/m/n/10 , \T1/zi4/m/n/10 "psrgb"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "bit"\T1/ptm/
m/n/10 , \T1/zi4/m/n/10 "bitrgb"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "bitcmyk"\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 "pngmono"\T1/ptm/m/n/10 ,

Underfull \hbox (badness 1546) in paragraph at lines 1854--1867
\T1/zi4/m/n/10 "pnggray"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "pngalpha"\T1/ptm/m/n/1
0 , \T1/zi4/m/n/10 "png16"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "png256"\T1/ptm/m/n/1
0 , \T1/zi4/m/n/10 "png16m"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "png48"\T1/ptm/m/n/1
0 , \T1/zi4/m/n/10 "jpeg"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "jpeggray"\T1/ptm/m/n/
10 ,
[725]
Underfull \hbox (badness 10000) in paragraph at lines 1963--1965
[]\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the 
set-ting of
[726] [727] [728]
Underfull \hbox (badness 6758) in paragraph at lines 2115--2118
[]\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript
 doc-u-men-ta-tion) are
[729] [730] [731] [732] [733] [734] [735] [736]
Underfull \hbox (badness 10000) in paragraph at lines 2618--2619

[737] [738] [739] [740] [741] [742] [743]
Underfull \hbox (badness 1152) in paragraph at lines 3056--3058
[]\T1/ptm/m/n/10 A length two in-te-ger vec-tor \T1/zi4/m/n/10 nr, nc \T1/ptm/m
/n/10 giv-ing the num-ber of rows and columns, ful-fill-ing
[744] [745] [746] [747] [748]
Underfull \hbox (badness 2856) in paragraph at lines 3377--3380
[]\T1/ptm/m/n/10 For use with \T1/zi4/m/n/10 onefile = FALSE \T1/ptm/m/n/10 giv
e a C in-te-ger for-mat such as

Underfull \hbox (badness 2662) in paragraph at lines 3391--3393
[]\T1/ptm/m/n/10 title string to em-bed as the `\T1/zi4/m/n/10 /Title\T1/ptm/m/
n/10 ' field in the file. De-faults to
[749] [750]
Underfull \hbox (badness 1173) in paragraph at lines 3507--3517
[]\T1/ptm/m/n/10 The \T1/zi4/m/n/10 paper \T1/ptm/m/n/10 ar-gu-ment sets the `\
T1/zi4/m/n/10 /MediaBox\T1/ptm/m/n/10 ' en-try in the file, which de-faults to 
\T1/zi4/m/n/10 width \T1/ptm/m/n/10 by
[751] [752] [753] [754] [755] [756] [757]
Underfull \vbox (badness 10000) has occurred while \output is active [758]
[759]
Underfull \vbox (badness 3803) has occurred while \output is active [760]
[761]
Underfull \hbox (badness 1067) in paragraph at lines 4208--4215
\T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled
 with sup-
[762] [763] [764]
Underfull \hbox (badness 1789) in paragraph at lines 4430--4432
[]\T1/ptm/m/n/10 title string to em-bed as the \T1/zi4/m/n/10 Title \T1/ptm/m/n
/10 com-ment in the file. De-faults to
[765]
Underfull \hbox (badness 1377) in paragraph at lines 4480--4485
[]\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently 
al-lowed val-ues

Underfull \hbox (badness 2671) in paragraph at lines 4507--4515
\T1/ptm/m/n/10 For use in this way you will prob-a-bly want to use [][]\T1/zi4/
m/n/10 setEPS[][][]() \T1/ptm/m/n/10 to set the de-faults as
[766]
Underfull \hbox (badness 1418) in paragraph at lines 4556--4563
\T1/ptm/m/n/10 it is one of \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4
/m/n/10 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/
zi4/m/n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm
/m/n/10 ,

Underfull \hbox (badness 2443) in paragraph at lines 4564--4573
\T1/ptm/m/n/10 PostScript de-vice is us-ing URW fonts, you will ob-tain ac-cess
 to more char-ac-ters and

Underfull \hbox (badness 2653) in paragraph at lines 4564--4573
\T1/ptm/m/n/10 more ap-pro-pri-ate met-rics by us-ing these names. To make thes
e eas-ier to re-mem-ber,

Underfull \hbox (badness 1755) in paragraph at lines 4574--4576
[]\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East 
Asian lan-guages -- see
[767] [768]
Underfull \hbox (badness 1057) in paragraph at lines 4685--4690
[]\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are \
T1/zi4/m/n/10 "rgb"\T1/ptm/m/n/10 ) (which is RGB+gray) and

Underfull \hbox (badness 7344) in paragraph at lines 4745--4747
[]\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t
ion by Brian D'Urso
[769] [770] [771]
Underfull \hbox (badness 2035) in paragraph at lines 4869--4878
[]\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv
-a-lents) are also pro-

Underfull \hbox (badness 10000) in paragraph at lines 4869--4878
\T1/ptm/m/n/10 vided: \T1/zi4/m/n/10 "AvantGarde"\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 "Bookman"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Courier"\T1/ptm/m/n/10 , \T1/zi4/m/
n/10 "Helvetica"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Helvetica-Narrow"\T1/ptm/m/n/1
0 ,

Underfull \hbox (badness 10000) in paragraph at lines 4869--4878
\T1/zi4/m/n/10 "NewCenturySchoolbook"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "Palatino"
 \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "Times"\T1/ptm/m/n/10 ; \T1/zi4/m/n/10 "URWG
othic"\T1/ptm/m/n/10 , \T1/zi4/m/n/10 "URWBookman"\T1/ptm/m/n/10 ,
[772]
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\T1/ptm/m/n/10 can be found at [][]$\T1/zi4/m/n/10 ftp : / / ftp . gnu . org / 
pub / non-[]gnu / chinese-[]fonts-[]truetype/$[][]\T1/ptm/m/n/10 . Ken

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\T1/ptm/m/n/10 Lunde's CJKV re-sources are at [][]$\T1/zi4/m/n/10 ftp : / / ftp
 . oreilly . com / pub / examples / nutshell / cjkv /

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[]\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t
ion by Brian D'Urso
[773] [774]
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[]\T1/ptm/m/n/10 arguments \T1/zi4/m/n/10 onefile\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 family\T1/ptm/m/n/10 , \T1/zi4/m/n/10 title\T1/ptm/m/n/10 , \T1/zi4/m/n/10 fo
nts\T1/ptm/m/n/10 , \T1/zi4/m/n/10 encoding\T1/ptm/m/n/10 , \T1/zi4/m/n/10 bg\T
1/ptm/m/n/10 , \T1/zi4/m/n/10 fg\T1/ptm/m/n/10 , \T1/zi4/m/n/10 width\T1/ptm/m/
n/10 ,
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[]\T1/ptm/m/n/10 title for the Quartz win-dow (ap-plies to on-screen out-put on
ly), de-fault
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[]\T1/zi4/m/n/10 rgb2hsv \T1/ptm/m/n/10 trans-forms col-ors from RGB space (red
/green/blue) into HSV space
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[]\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used
. One of
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[]\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" \T1/ptm/m/n/10 for CJK 
lan-guages and
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[]\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of \T1/zi4/m/n/1
0 "AvantGarde"\T1/ptm/m/n/10 ,
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[]\T1/ptm/m/n/10 multiplicities (pos-i-tive in-te-gers); i.e., \T1/zi4/m/n/10 n
umber[i] \T1/ptm/m/n/10 is the mul-ti-plic-ity of
[798] [799] [800]) (./graphics-pkg.tex
Chapter 5.
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[]\T1/zi4/m/n/10 axTicks() \T1/ptm/m/n/10 can be used an \T1/phv/m/n/10 R \T1/p
tm/m/n/10 in-ter-face to the C func-tion \T1/zi4/m/n/10 CreateAtVector() \T1/pt
m/m/n/10 in
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[][][]\T1/zi4/m/n/10 boxplot.default[][][] \T1/ptm/m/n/10 which al-ready works 
nowa-days with data.frames; [][]\T1/zi4/m/n/10 boxplot.formula[][][]\T1/ptm/m/n
/10 ,
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\T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n
ot ap-ply to
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[]\T1/ptm/m/n/10 vector of back-ground (fill) col-ors for the open plot sym-bol
s given by
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[]\T1/ptm/m/n/10 a func-tion which in-di-cates what should hap-pen when the dat
a con-tain
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[]\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are 
to be used: see
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[]\T1/ptm/b/it/10 R.O.\T1/ptm/m/n/10 ; size of de-fault char-ac-ter \T1/zi4/m/n
/10 (width, height) \T1/ptm/m/n/10 in user co-or-di-nate units.

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\T1/zi4/m/n/10 par("cxy") \T1/ptm/m/n/10 is \T1/zi4/m/n/10 par("cin")/par("pin"
) \T1/ptm/m/n/10 scaled to user co-or-di-nates. Note that
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[]\T1/ptm/m/n/10 The five stan-dard dash-dot line types (\T1/zi4/m/n/10 lty = 2
:6\T1/ptm/m/n/10 ) cor-re-spond to
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[][] 
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\T1/ptm/m/n/10 avoided (see the Warn-ings sec-tion be-low). Split-screen mode i
s ex-ited by the com-mand
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[]\T1/ptm/m/n/10 For each \T1/zi4/m/n/10 i\T1/ptm/m/n/10 , a line seg-ment is d
rawn be-tween the point \T1/zi4/m/n/10 (x0[i], y0[i]) \T1/ptm/m/n/10 and the po
int
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[]\T1/ptm/m/n/10 The main ti-tle (on top) us-ing font and size (char-ac-ter ex-
pan-sion)

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[]\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font and size \T1/zi4/m/n/10 par
("font.sub") \T1/ptm/m/n/10 and color
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l.8649 \HeaderA{units}{Graphical Units}{units}
                                               [942] [943] [944] [945] [946])
(./grid-pkg.tex
Chapter 6.

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[]\T1/ptm/m/n/10 Note that \T1/zi4/m/n/10 preDrawDetails \T1/ptm/m/n/10 and \T1
/zi4/m/n/10 postDrawDetails \T1/ptm/m/n/10 are also called in the cal-cu-la-tio
n of
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[][][]\T1/ptm/m/n/10 Grid[][][], [][]\T1/zi4/m/n/10 pushViewport[][][]\T1/ptm/m
/n/10 , [][]\T1/zi4/m/n/10 popViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10
 downViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 seekViewport[][][]\T1/pt
m/m/n/10 , [][]\T1/zi4/m/n/10 upViewport[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/
10 unit[][][]\T1/ptm/m/n/10 ,
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[]\T1/ptm/m/n/10 Both func-tions cre-ate an ar-rows grob (a graph-i-cal ob-ject
 de-scrib-ing ar-rows), but only
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[]\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec
t de-scrib-ing seg-ments), but only
[1021] [1022] [1023] [1024]
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[]\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject
s are co-erced by
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\T1/ptm/m/n/10 and to spec-ify the min-i-mum or max-i-mum of a list of unit ob-
jects (e.g.,
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[]\T1/ptm/m/n/10 This can be use-ful for re-turn-ing to your start-ing point by
 do-ing some-thing like
[1054] [1055] [1056] [1057]) (./methods-pkg.tex [1058]
Chapter 7.
[1059] [1060] [1061] [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069]
[1070] [1071] [1072] [1073] [1074]
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[]\T1/ptm/m/n/10 The class \T1/zi4/m/n/10 "className" \T1/ptm/m/n/10 ex-tends \
T1/zi4/m/n/10 "character" \T1/ptm/m/n/10 and has a slot \T1/zi4/m/n/10 "package
"\T1/ptm/m/n/10 , also of class
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[]\T1/ptm/m/n/10 The ar-gu-ment to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/10 c
an be an ob-ject of class

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\T1/ptm/m/n/10 file name is passed to \T1/zi4/m/n/10 insertSource \T1/ptm/m/n/1
0 it calls \T1/zi4/m/n/10 evalSource \T1/ptm/m/n/10 to ob-tain the
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[]\T1/ptm/m/n/10 As you might ex-pect [][]\T1/zi4/m/n/10 setGeneric[][][] \T1/p
tm/m/n/10 and [][]\T1/zi4/m/n/10 setGroupGeneric[][][] \T1/ptm/m/n/10 cre-ate o
b-jects of class
[1096] [1097]
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[]\T1/ptm/m/n/10 In \T1/zi4/m/n/10 getGenerics\T1/ptm/m/n/10 , if \T1/zi4/m/n/1
0 TRUE\T1/ptm/m/n/10 , the \T1/zi4/m/n/10 package \T1/ptm/m/n/10 slot of the re
-turned re-sult is in
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\T1/ptm/m/n/10 In ad-di-tion, \T1/zi4/m/n/10 removeGeneric \T1/ptm/m/n/10 re-mo
ves the func-tion it-self; \T1/zi4/m/n/10 removeMethods \T1/ptm/m/n/10 re-store
s the
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[]\T1/zi4/m/n/10 getPackageName \T1/ptm/m/n/10 re-turns the character-string na
me of the pack-age (with-out the ex-tra-ne-ous
[1106] [1107] [1108] [1109] [1110]
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[]\T1/ptm/m/n/10 The \T1/zi4/m/n/10 initialize \T1/ptm/m/n/10 method for these 
classes takes spe-cial ar-gu-ments

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[]\T1/ptm/m/n/10 The
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[]\T1/ptm/m/n/10 The class \T1/zi4/m/n/10 "SealedMethodDefinition" \T1/ptm/m/n/
10 is cre-ated by a call to [][]\T1/zi4/m/n/10 setMethod[][][] \T1/ptm/m/n/10 w
ith ar-gu-ment

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[]\T1/ptm/m/n/10 class [][]\T1/zi4/m/n/10 MethodsList[][][] \T1/ptm/m/n/10 for 
the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar

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\T1/zi4/m/n/10 MethodDefinition\T1/ptm/m/n/10 , or an ex-ten-sion. Class [][]\T
1/zi4/m/n/10 MethodWithNext[][][] \T1/ptm/m/n/10 for an ex-ten-sion used by
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\T1/ptm/m/n/10 names cor-re-spond-ing to some or all of the for-mal ar-gu-ments
. In the pre-vi-ous ex-am-ple,

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\T1/ptm/m/n/10 if se-lect-ing class \T1/zi4/m/n/10 "track" \T1/ptm/m/n/10 for \
T1/zi4/m/n/10 x\T1/ptm/m/n/10 , find-ing that the se-lec-tion was an-other meth
-ods list and

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[]\T1/ptm/m/n/10 Object of class \T1/zi4/m/n/10 "PossibleMethod" \T1/ptm/m/n/10
 the method to use in re-sponse to a
[1135] [1136] [1137] [1138] [1139]
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[]\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o
ds for this class are found (us-ing
[1140] [1141] [1142] [1143]
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[]\T1/ptm/m/n/10 Two op-tional method names are in-ter-preted spe-cially, \T1/z
i4/m/n/10 initialize \T1/ptm/m/n/10 and
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[]\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic 
can be ob-tained by call-ing
[1159] [1160] [1161]
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[]\T1/ptm/m/n/10 for \T1/zi4/m/n/10 .selectSuperClasses() \T1/ptm/m/n/10 only, 
a [][]\T1/zi4/m/n/10 list[][][] \T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cal
ly
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[]\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance 
in R [][]$\T1/zi4/m/n/10 http : / / stat . stanford . edu / ~jmc4 /
[1195]
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[]\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl
ass, from the data part; e.g.,
[1196] [1197] [1198] [1199]) (./parallel-pkg.tex [1200]
Chapter 8.

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[]\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `\T1/zi4
/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"\T1/ptm/m/n/10 ' [][]RNG[
][][]: see
[1201] [1202] [1203] [1204] [1205] [1206] [1207] [1208] [1209] [1210] [1211]
[1212] [1213] [1214] [1215] [1216] [1217] [1218] [1219]
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[]\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by \T1/zi4/m/n/10 .R
andom.seed \T1/ptm/m/n/10 when the
[1220] [1221] [1222]) (./splines-pkg.tex
Chapter 9.

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[]\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 <bates@stat.wisc.edu> \T1/ptm/
m/n/10 and William N. Ven-ables
[1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233]
[1234] [1235] [1236] [1237]) (./stats-pkg.tex [1238]
Chapter 10.
[1239] [1240] [1241] [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249]
[1250] [1251]
Underfull \hbox (badness 1412) in paragraph at lines 843--845
[]\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from \T1/zi4/m/n/10 lm 
\T1/ptm/m/n/10 or \T1/zi4/m/n/10 aov\T1/ptm/m/n/10 , or a for-mula for
[1252] [1253] [1254] [1255] [1256] [1257] [1258] [1259]
Underfull \hbox (badness 2503) in paragraph at lines 1327--1330
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1260] [1261] [1262]
Underfull \hbox (badness 10000) in paragraph at lines 1506--1510
[]\T1/ptm/m/n/10 An ob-ject of class \T1/zi4/m/n/10 c("aov", "lm") \T1/ptm/m/n/
10 or for mul-ti-ple re-sponses of class
[1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273]
Underfull \hbox (badness 3965) in paragraph at lines 2156--2158
[]\T1/ptm/m/n/10 the AIC value cor-re-spond-ing to the log-likelihood. Only val
id for
[1274] [1275] [1276] [1277] [1278]
Underfull \hbox (badness 3965) in paragraph at lines 2485--2487
[]\T1/ptm/m/n/10 the AIC value cor-re-spond-ing to the log-likelihood. Only val
id for
[1279] [1280] [1281] [1282] [1283] [1284] [1285] [1286] [1287] [1288] [1289]
[1290]
Underfull \hbox (badness 2503) in paragraph at lines 3260--3263
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1291] [1292] [1293] [1294] [1295] [1296] [1297] [1298] [1299] [1300] [1301]
[1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310]
Underfull \hbox (badness 3989) in paragraph at lines 4482--4489
[]\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 
(\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/
it/10 g[] \OT1/cmr/m/n/10 =
[1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] [1320]
Underfull \hbox (badness 2932) in paragraph at lines 5097--5099
[]\T1/ptm/m/n/10 Note that the usual def-i-ni-tion of con-vo-lu-tion of two se-
quences \T1/zi4/m/n/10 x \T1/ptm/m/n/10 and \T1/zi4/m/n/10 y \T1/ptm/m/n/10 is 
given by
[1321] [1322] [1323] [1324]
Underfull \hbox (badness 1142) in paragraph at lines 5338--5350
\T1/ptm/m/n/10 For \T1/zi4/m/n/10 cov()\T1/ptm/m/n/10 , a non-Pearson method is
 un-usual but avail-able for the sake of com-plete-ness.
[1325] [1326]
Underfull \hbox (badness 2503) in paragraph at lines 5477--5481
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1327]
Underfull \hbox (badness 1168) in paragraph at lines 5538--5543
[]\T1/ptm/m/n/10 For Spear-man's test, p-values are com-puted us-ing al-go-rith
m AS 89 for $\OML/cmm/m/it/10 n < \OT1/cmr/m/n/10 1290$ \T1/ptm/m/n/10 and
[1328] [1329] [1330] [1331] [1332] [1333] [1334]
Underfull \hbox (badness 8132) in paragraph at lines 5981--5986
\T1/ptm/m/n/10 then \T1/zi4/m/n/10 y \T1/ptm/m/n/10 is a den-dro-gram of the sa
me graph struc-ture as \T1/zi4/m/n/10 x \T1/ptm/m/n/10 and for each node,
[1335] [1336] [1337] [1338] [1339]
Underfull \hbox (badness 7081) in paragraph at lines 6236--6239
[]\T1/ptm/m/n/10 Objects of class \T1/zi4/m/n/10 "hclust" \T1/ptm/m/n/10 can be
 con-verted to class \T1/zi4/m/n/10 "dendrogram" \T1/ptm/m/n/10 us-ing method

Underfull \hbox (badness 10000) in paragraph at lines 6240--6242
[]\T1/zi4/m/n/10 rev.dendrogram \T1/ptm/m/n/10 sim-ply re-turns the den-dro-gra
m \T1/zi4/m/n/10 x \T1/ptm/m/n/10 with re-versed nodes, see also
[1340]
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[1342] [1343] [1344] [1345] [1346] [1347] [1348] [1349] [1350] [1351]
Underfull \hbox (badness 10000) in paragraph at lines 7040--7043
[]\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][]\T
1/zi4/m/n/10 dist[][][]()\T1/ptm/m/n/10 , the
[1352] [1353]
Underfull \hbox (badness 10000) in paragraph at lines 7177--7180
[]\T1/ptm/m/n/10 The CRAN task view on dis-tri-bu-tions, [][]$\T1/zi4/m/n/10 ht
tp : / / cran . r-[]project . org / web / views /
[1354] [1355] [1356] [1357]
Underfull \vbox (badness 3803) has occurred while \output is active [1358]
[1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369]
[1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377]
Underfull \hbox (badness 2626) in paragraph at lines 8629--8632
[]\T1/ptm/m/n/10 Either \T1/zi4/m/n/10 "convolution" \T1/ptm/m/n/10 or \T1/zi4/
m/n/10 "recursive" \T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If
[1378]
Underfull \hbox (badness 2503) in paragraph at lines 8729--8733
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1379] [1380] [1381] [1382] [1383] [1384]
Overfull \hbox (6.88992pt too wide) in paragraph at lines 9063--9065
[]\T1/ptm/m/n/10 the char-ac-ter string \T1/zi4/m/n/10 "Fligner-Killeen test of
 homogeneity of variances"\T1/ptm/m/n/10 . 
[1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394]
Underfull \hbox (badness 1019) in paragraph at lines 9729--9732
[]\T1/ptm/m/n/10 See also [][]$\T1/zi4/m/n/10 http : / / en . wikipedia . org /
 wiki / Incomplete _ gamma _ function$[][]\T1/ptm/m/n/10 , or [][]$\T1/zi4/m/n/
10 http : / / dlmf .
[1395] [1396] [1397] [1398]
Underfull \hbox (badness 4518) in paragraph at lines 9990--9995
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1399] [1400] [1401] [1402] [1403]
Underfull \hbox (badness 2142) in paragraph at lines 10333--10336
[]\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p
tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1
0 dev \OMS/cmsy/m/n/10 ^^@

Underfull \hbox (badness 1253) in paragraph at lines 10352--10355
[]\T1/ptm/m/n/10 When \T1/zi4/m/n/10 trace \T1/ptm/m/n/10 is true, calls to [][
]\T1/zi4/m/n/10 cat[][][] \T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-
er-a-tion. Hence,
[1404]
Underfull \hbox (badness 1708) in paragraph at lines 10414--10417
[]\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter-
na-tives are:
[1405] [1406] [1407] [1408] [1409]
Underfull \hbox (badness 1694) in paragraph at lines 10762--10765
[]\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these 
de-fault to
[1410]
Underfull \hbox (badness 1867) in paragraph at lines 10781--10790
\T1/ptm/m/n/10 in the row case. If ei-ther is miss-ing, as by de-fault, then th
e or-der-ing of the cor-re-
[1411] [1412] [1413] [1414] [1415] [1416] [1417]pdfTeX warning (ext4): destinat
ion with the same identifier (name{Rfn.hat}) has been already used, duplicate i
gnored
<to be read again> 
                   \relax 
l.11228 \aliasA{hat}{influence.measures}{hat}
                                              [1418] [1419]
Underfull \hbox (badness 1484) in paragraph at lines 11352--11354
[]\T1/ptm/m/n/10 The func-tion \T1/zi4/m/n/10 hat() \T1/ptm/m/n/10 ex-ists main
ly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing
[1420] [1421] [1422] [1423] [1424] [1425] [1426] [1427] [1428]
Underfull \hbox (badness 4441) in paragraph at lines 11899--11901
[]\T1/ptm/m/n/10 vector of dif-fer-enc-ing co-ef-fi-cients, so an ARMA model is
 fit-ted to
[1429] [1430] [1431] [1432] [1433]
Underfull \hbox (badness 2894) in paragraph at lines 12196--12200
[]\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f
ault method
[1434] [1435] [1436] [1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444]
Underfull \hbox (badness 4518) in paragraph at lines 12877--12882
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454]
Underfull \hbox (badness 4518) in paragraph at lines 13495--13500
[]\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co
-ercible by
[1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] [1463] [1464] [1465]
[1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473]
Underfull \hbox (badness 2503) in paragraph at lines 14694--14698
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1474] [1475]
Underfull \vbox (badness 3803) has occurred while \output is active [1476]
[1477] [1478] [1479] [1480] [1481] [1482]
Underfull \hbox (badness 1418) in paragraph at lines 15203--15209
[]\T1/zi4/m/n/10 model.offset \T1/ptm/m/n/10 and \T1/zi4/m/n/10 model.response 
\T1/ptm/m/n/10 are equiv-a-lent to \T1/zi4/m/n/10 model.extract(, "offset") \T1
/ptm/m/n/10 and
[1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493]
[1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] [1502] [1503] [1504]
[1505]
Underfull \vbox (badness 3803) has occurred while \output is active [1506]
[1507] [1508]
Underfull \hbox (badness 2359) in paragraph at lines 16828--16830
[]\T1/ptm/m/n/10 Douglas M. Bates and Saikat De-bRoy: David M. Gay for the For-
tran code used by
[1509]
Underfull \vbox (badness 10000) has occurred while \output is active [1510]
Underfull \vbox (badness 10000) has occurred while \output is active [1511]
[1512] [1513] [1514] [1515] [1516] [1517] [1518] [1519] [1520] [1521] [1522]
[1523]
Underfull \hbox (badness 1377) in paragraph at lines 17734--17739
[]\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz
a-tion is per-formed on

Underfull \hbox (badness 1735) in paragraph at lines 17739--17742
[]\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma
-tion to the gra-di-ent, on

Underfull \hbox (badness 1184) in paragraph at lines 17752--17756
\T1/ptm/m/n/10 value by a fac-tor of \T1/zi4/m/n/10 reltol * (abs(val) + reltol
) \T1/ptm/m/n/10 at a step. De-faults to

Underfull \hbox (badness 2662) in paragraph at lines 17760--17764
[]\T1/ptm/m/n/10 The fre-quency of re-ports for the \T1/zi4/m/n/10 "BFGS"\T1/pt
m/m/n/10 , \T1/zi4/m/n/10 "L-BFGS-B" \T1/ptm/m/n/10 and \T1/zi4/m/n/10 "SANN" \
T1/ptm/m/n/10 meth-ods if
[1524] [1525] [1526]
Underfull \vbox (badness 10000) has occurred while \output is active [1527]
[1528] [1529] [1530] [1531] [1532] [1533]
Underfull \hbox (badness 1337) in paragraph at lines 18376--18379
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544]
[1545] [1546]
Underfull \hbox (badness 5563) in paragraph at lines 19103--19105
[]\T1/ptm/m/n/10 logical. If \T1/zi4/m/n/10 TRUE\T1/ptm/m/n/10 , add to al-read
y ex-ist-ing plot. Only valid for

Underfull \hbox (badness 1194) in paragraph at lines 19106--19109
[]\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting
 of the con-fi-dence
[1547] [1548] [1549] [1550] [1551] [1552]
Underfull \hbox (badness 2503) in paragraph at lines 19478--19481
[]\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of 
\T1/zi4/m/n/10 "two.sided"\T1/ptm/m/n/10 ,
[1553]
Underfull \hbox (badness 10000) in paragraph at lines 19505--19507
[]\T1/ptm/m/n/10 the char-ac-ter string \T1/zi4/m/n/10 "Exact Poisson test" \T1
/ptm/m/n/10 or
[1554] [1555] [1556] [1557] [1558] [1559] [1560] [1561] [1562] [1563] [1564]
[1565] [1566] [1567] [1568]
Underfull \hbox (badness 10000) in paragraph at lines 20475--20481
[]\T1/ptm/m/n/10 For time-series pre-dic-tion, [][]\T1/zi4/m/n/10 predict.ar[][
][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 predict.Arima[][][]\T1/ptm/m/n/10 , [][]
\T1/zi4/m/n/10 predict.arima0[][][]\T1/ptm/m/n/10 ,
[1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] [1577] [1578] [1579]
[1580] [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] [1589] [1590]
[1591]
Underfull \hbox (badness 1337) in paragraph at lines 21781--21787
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602]
[1603]
Underfull \hbox (badness 10000) in paragraph at lines 22574--22577
[]\T1/ptm/m/n/10 Optional vec-tor with clus-ter mem-ber-ships as re-turned by
[1604] [1605] [1606] [1607] [1608] [1609] [1610] [1611] [1612] [1613]
Underfull \hbox (badness 10000) in paragraph at lines 23150--23153
[]\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult \T1/zi4/m/n/10 y = run
med(x, k) \T1/ptm/m/n/10 sim-ply has

Underfull \hbox (badness 3690) in paragraph at lines 23201--23205
[][][]\T1/zi4/m/n/10 smoothEnds[][][] \T1/ptm/m/n/10 which im-ple-ments Tukey's
 end point rule and is called by de-fault from
[1614] [1615] [1616] [1617] [1618]
Underfull \hbox (badness 7667) in paragraph at lines 23467--23469
[]\T1/ptm/m/n/10 a nu-meric vec-tor or an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-je
ct which is co-ercible to one by
[1619] [1620] [1621] [1622]
Underfull \hbox (badness 3439) in paragraph at lines 23676--23682
[][]\T1/zi4/m/n/10 SSasympOff[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSasympO
rig[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSbiexp[][][]\T1/ptm/m/n/10 , [][]
\T1/zi4/m/n/10 SSfol[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSfpl[][][]\T1/pt
m/m/n/10 , [][]\T1/zi4/m/n/10 SSgompertz[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/
10 SSlogis[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/n/10 SSmicmen[][][]\T1/ptm/m/n/1
0 ,
[1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633]
[1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] [1643] [1644]
[1645]
Underfull \vbox (badness 10000) has occurred while \output is active [1646]
Underfull \hbox (badness 3514) in paragraph at lines 25217--25222
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1647]
Underfull \hbox (badness 3514) in paragraph at lines 25279--25284
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1648]
Underfull \hbox (badness 3514) in paragraph at lines 25336--25341
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1649]
Underfull \hbox (badness 3514) in paragraph at lines 25397--25403
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1650] [1651] [1652] [1653]
Underfull \hbox (badness 3514) in paragraph at lines 25592--25597
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion

Underfull \hbox (badness 3514) in paragraph at lines 25648--25653
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1654]
Underfull \hbox (badness 3514) in paragraph at lines 25705--25710
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1655]
Underfull \hbox (badness 3514) in paragraph at lines 25760--25765
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 input\
T1/ptm/m/n/10 . It is the value of the ex-pres-sion
[1656] [1657]
Underfull \hbox (badness 6691) in paragraph at lines 25829--25834
[]\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as \T1/zi4/m/n/10 x\T1/p
tm/m/n/10 . It is the value of the ex-pres-sion
[1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665]
Underfull \hbox (badness 10000) in paragraph at lines 26342--26345
[]\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-

Underfull \hbox (badness 10000) in paragraph at lines 26342--26345
\T1/ptm/m/n/10 trac-tion, which should be odd. If \T1/zi4/m/n/10 NULL\T1/ptm/m/
n/10 , the de-fault,
[1666] [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] [1675]
Underfull \hbox (badness 5431) in paragraph at lines 26948--26950
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1676] [1677] [1678] [1679]
Underfull \hbox (badness 5431) in paragraph at lines 27158--27161
[]\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above \T1/z
i4/m/n/10 cov.unscaled\T1/ptm/m/n/10 , if
[1680] [1681] [1682] [1683] [1684]
Underfull \hbox (badness 1337) in paragraph at lines 27469--27473
[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
[1685] [1686]
Underfull \hbox (badness 10000) in paragraph at lines 27586--27589
[]\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/
10 ; cur-rently ex-cept for \T1/zi4/m/n/10 rt()\T1/ptm/m/n/10 , only for
[1687] [1688] [1689]
Underfull \hbox (badness 1616) in paragraph at lines 27769--27772
[]\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial
 resid-u-als, when
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[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
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[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth-
e-sis, must be one of
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[]\T1/ptm/m/n/10 an es-ti-mate of the lo-ca-tion pa-ram-e-ter. (Only present if
 ar-gu-ment
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[]\T1/ptm/m/n/10 There is a \T1/zi4/m/n/10 summary \T1/ptm/m/n/10 method for co
n-tin-gency ta-ble ob-jects cre-ated by \T1/zi4/m/n/10 table \T1/ptm/m/n/10 or
[1728] [1729] [1730]) (./stats4-pkg.tex
Chapter 11.
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                                                   [1737] [1738] [1739]
[1740]) (./tcltk-pkg.tex
Chapter 12.
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[]\T1/zi4/m/n/10 tcl \T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-ing
 any Tk or Tcl com-mand by sim-ply run-ning
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[][][]\T1/zi4/m/n/10 select.list[][][] \T1/ptm/m/n/10 (a text ver-sion ex-cept 
on Win-dows and the OS X GUI), [][]\T1/zi4/m/n/10 menu[][][] \T1/ptm/m/n/10 (wh
ose
[1761]) (./tools-pkg.tex [1762]
Chapter 13.
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[1764]
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[]\T1/zi4/m/n/10 assertWarning() \T1/ptm/m/n/10 as-serts that a warn-ing will b
e sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas
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[]\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t
o ren-der each of the 12 types

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\T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][]\T1/zi4/m/n/10 bibe
ntry[][][] \T1/ptm/m/n/10 as well as sev-eral other rou-tines de-

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\T1/zi4/m/n/10 formatIncollection\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatInProcee
dings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatManual\T1/ptm/m/n/10 , \T1/zi4/m/n/1
0 formatMastersthesis\T1/ptm/m/n/10 ,

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\T1/zi4/m/n/10 formatMisc\T1/ptm/m/n/10 , \T1/zi4/m/n/10 formatPhdthesis\T1/ptm
/m/n/10 , \T1/zi4/m/n/10 formatProceedings\T1/ptm/m/n/10 , \T1/zi4/m/n/10 forma
tTechreport \T1/ptm/m/n/10 and
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\T1/ptm/m/n/10 ac-ters. It is sorted by Uni-code point and within a point al-ph
a-bet-i-cally on the glyph

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\T1/ptm/m/n/10 (there can be more than one name for a Uni-code point). The data
 are in the file
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[]\T1/ptm/m/n/10 Delete files in the tem-po-rary di-rec-tory? This op-tion is i
g-nored when
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\T1/ptm/m/n/10 giv-ing the repos-i-to-ries to use for lo-cat-ing re-verse de-pe
n-den-cies (de-

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[]\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v
erse de-pen-den-cies
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[]\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing


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\T1/zi4/m/n/10 summarize_check_packages_in_dir_results \T1/ptm/m/n/10 and \T1/z
i4/m/n/10 summarize_check_packages_in_dir_timings\T1/ptm/m/n/10 ,
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[]\T1/ptm/m/n/10 Re-save PDF files (es-pe-cially vi-gnettes) more com-pactly. S
up-port func-tion for
[1783] [1784]
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[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
 sub-set of
[1785]
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[]\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br
ary trees, or \T1/zi4/m/n/10 NULL \T1/ptm/m/n/10 for all known trees (see
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[]\T1/ptm/m/n/10 If \T1/zi4/m/n/10 reduce \T1/ptm/m/n/10 is \T1/zi4/m/n/10 TRUE
\T1/ptm/m/n/10 , the sys-tem will col-lapse the fields in the \T1/zi4/m/n/10 De
pendsList \T1/ptm/m/n/10 ob-ject

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\T1/ptm/m/n/10 such that a min-i-mal set of de-pen-den-cies are spec-i-fied (fo
r in-stance if there was
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[]\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of de-pen-den-cies, a
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[]\T1/zi4/m/sl/10 NULL \T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec-t
or of links, as re-turned by
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[]\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing how the news en-tries shoul
d be \T1/ptm/m/it/10 chopped\T1/ptm/m/n/10 ;
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[]\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p
o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists.
 The

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\T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in 
the pack-age are ex-am-ined to cre-ate a file
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[]\T1/ptm/m/n/10 If \T1/zi4/m/sl/10 reduce \T1/ptm/m/n/10 is \T1/zi4/m/sl/10 TR
UE\T1/ptm/m/n/10 , the sys-tem will col-lapse the fields in the \T1/zi4/m/sl/10
 DependsList \T1/ptm/m/n/10 ob-ject

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\T1/ptm/m/n/10 such that a min-i-mal set of de-pen-den-cies are spec-i-fied (fo
r in-stance if there was
[1824] [1825]
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[]\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to be used in the `\T
1/zi4/m/sl/10 PACKAGES\T1/ptm/m/n/10 ' and
[1826] [1827] [1828] [1829]) (./utils-pkg.tex [1830]
Chapter 14.
[1831]
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[]\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `\T
1/zi4/m/sl/10 insertions\T1/ptm/m/n/10 ',
[1832] [1833]
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[]\T1/ptm/m/n/10 logical in-di-cat-ing if the search should be case-insensitive
, \T1/zi4/m/sl/10 TRUE \T1/ptm/m/n/10 by de-

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[]\T1/zi4/m/sl/10 find \T1/ptm/m/n/10 is a dif-fer-ent user in-ter-face for the
 same task as \T1/zi4/m/sl/10 apropos\T1/ptm/m/n/10 . How-ever, by de-fault
[1834] [1835] [1836] [1837] [1838] [1839]
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[]\T1/ptm/m/n/10 Functions \T1/zi4/m/sl/10 aspell_package_Rd_files\T1/ptm/m/n/1
0 , \T1/zi4/m/sl/10 aspell_package_vignettes\T1/ptm/m/n/10 ,

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\T1/zi4/m/sl/10 aspell_package_R_files \T1/ptm/m/n/10 and \T1/zi4/m/sl/10 aspel
l_package_C_files \T1/ptm/m/n/10 per-form spell check-ing on the
[1840]
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[]\T1/ptm/m/n/10 Argument \T1/zi4/m/sl/10 filters \T1/ptm/m/n/10 can be used to
 se-lect which of the pack-ages on the repos-i-to-

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\T1/ptm/m/n/10 ries are re-ported. It is called with its de-fault value (\T1/zi
4/m/sl/10 NULL\T1/ptm/m/n/10 ) by func-tions such as
[1841]
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[]\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields \T1/zi4/m/sl/10 "O
S_type"\T1/ptm/m/n/10 , \T1/zi4/m/sl/10 "License"\T1/ptm/m/n/10 , \T1/zi4/m/sl/
10 "License_is_FOSS"\T1/ptm/m/n/10 ,
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[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/sl/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/sl/10 ccaddress \T1/ptm/m/n/10 to pass to
[1851] [1852] [1853] [1854]
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[]\T1/ptm/m/n/10 None for \T1/zi4/m/sl/10 chooseCRANmirror()\T1/ptm/m/n/10 , th
is func-tion is in-voked for its side ef-fect of up-dat-ing
[1855] [1856] [1857]
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[]\T1/ptm/m/n/10 A list of keys that have been pre-vi-ously cited, to be used w
hen
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[]\T1/ptm/m/n/10 logical in-di-cat-ing if the re-sult should be sim-pli-fied to
 an [][]\T1/zi4/m/sl/10 array[][][] \T1/ptm/m/n/10 (typ-i-

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[]\T1/ptm/m/n/10 a [][]\T1/zi4/m/sl/10 list[][][] \T1/ptm/m/n/10 or [][]\T1/zi4
/m/sl/10 array[][][]\T1/ptm/m/n/10 , see the \T1/zi4/m/sl/10 simplify \T1/ptm/m
/n/10 ar-gu-ment above. In the lat-ter case, the iden-tity
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[]\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by
 the \T1/zi4/m/sl/10 quiet \T1/ptm/m/n/10 ar-gu-ment and the

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\T1/zi4/m/sl/10 internet.info \T1/ptm/m/n/10 op-tion. The de-tails de-pend on t
he plat-form and scheme, but set-ting
[1877]
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[]\T1/ptm/m/n/10 Usernames and pass-words can be set for HTTP proxy trans-fers 
via en-vi-ron-ment vari-able
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                                                   [1890] [1891] [1892]
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[1904]
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[]\T1/ptm/m/n/10 additional named ar-gu-ments such as \T1/zi4/m/sl/10 method \T
1/ptm/m/n/10 and \T1/zi4/m/sl/10 ccaddress \T1/ptm/m/n/10 to pass to
[1905]
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[]\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words
'. `Key-

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\T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are 
listed in file
[1906] [1907] [1908]
Underfull \hbox (badness 10000) in paragraph at lines 4920--4929
[]\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de
x,
[1909] [1910]
Underfull \hbox (badness 3118) in paragraph at lines 5036--5038
[]\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion `
Lock-ing' in the help for
[1911]
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[]\T1/ptm/m/n/10 If \T1/zi4/m/sl/10 repos = NULL\T1/ptm/m/n/10 , a char-ac-ter 
vec-tor of file paths of `\T1/zi4/m/sl/10 .tar.gz\T1/ptm/m/n/10 ' files.
[1912]
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[]\T1/ptm/m/n/10 logical in-di-cat-ing to also in-stall unin-stalled pack-ages 
which these pack-

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\T1/ptm/m/n/10 ages de-pend on/link to/import/suggest (and so on re-cur-sively)
. Not

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\T1/ptm/m/n/10 used if \T1/zi4/m/sl/10 repos = NULL\T1/ptm/m/n/10 . Can also be
 a char-ac-ter vec-tor, a sub-set of

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[]\T1/ptm/m/n/10 (not used on Win-dows) anal-o-gous to \T1/zi4/m/sl/10 configur
e.args \T1/ptm/m/n/10 for flag
[1913]
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[]\T1/ptm/m/n/10 an op-tional char-ac-ter vec-tor of ad-di-tional op-tion(s) to
 be passed

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\T1/ptm/m/n/10 to \T1/zi4/m/sl/10 R CMD INSTALL \T1/ptm/m/n/10 for a source pac
k-age in-stall. E.g.,
[1914]
Underfull \hbox (badness 10000) in paragraph at lines 5375--5380
[][][]\T1/zi4/m/sl/10 update.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10
 available.packages[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 download.packages
[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 installed.packages[][][]\T1/ptm/m/n/
10 ,
[1915] [1916] [1917] [1918] [1919] [1920] [1921] [1922] [1923] [1924] [1925]
[1926] [1927] [1928] [1929] [1930] [1931] [1932] [1933]
Underfull \hbox (badness 10000) in paragraph at lines 6529--6531
[]\T1/zi4/m/sl/10 packageVersion() \T1/ptm/m/n/10 is a con-ve-nience short-cut,
 al-low-ing things like

Underfull \hbox (badness 2310) in paragraph at lines 6534--6539
[]\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the
 given pack-age is found and can suc-cess-fully be read,
[1934] [1935] [1936]
Underfull \hbox (badness 10000) in paragraph at lines 6691--6694
[]\T1/ptm/m/n/10 a data frame with columns as the \T1/ptm/m/it/10 ma-trix \T1/p
tm/m/n/10 re-turned by

Underfull \hbox (badness 10000) in paragraph at lines 6691--6694
[][]\T1/zi4/m/sl/10 available.packages[][][] \T1/ptm/m/n/10 plus \T1/zi4/m/sl/1
0 "Status"\T1/ptm/m/n/10 , a fac-tor with lev-els
[1937] [1938] [1939] [1940] [1941] [1942]
Underfull \hbox (badness 1789) in paragraph at lines 7072--7074
[]\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for
 more dis-cus-sion of the
[1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953]
[1954]
Underfull \hbox (badness 1097) in paragraph at lines 7871--7874
[]\T1/ptm/m/n/10 The name \T1/zi4/m/sl/10 "clipboard" \T1/ptm/m/n/10 may also b
e used on Win-dows, in which case
[1955] [1956]
Underfull \hbox (badness 3000) in paragraph at lines 7999--8004
[][][]\T1/zi4/m/sl/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/sl/10 read.t
able[][][]\T1/ptm/m/n/10 ;
[1957] [1958] [1959] [1960] [1961] [1962] [1963] [1964]
Underfull \hbox (badness 2134) in paragraph at lines 8561--8566
[][][]\T1/zi4/m/sl/10 scan[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 type.conve
rt[][][]\T1/ptm/m/n/10 , [][]\T1/zi4/m/sl/10 read.fwf[][][] \T1/ptm/m/n/10 for 
read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/ptm/m/n/10 i
dth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][]\T1/zi4/m/sl/10 write.
table[][][]\T1/ptm/m/n/10 ;
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[1976] [1977] [1978] [1979] [1980]
Underfull \hbox (badness 10000) in paragraph at lines 9504--9506
[][][]$\T1/zi4/m/sl/10 http : / / en . wikipedia . org / wiki / Ctags$[][]\T1/p
tm/m/n/10 , [][]$\T1/zi4/m/sl/10 http : / / www . gnu . org / software / emacs 
/
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Chapter 1 Chapter 2 [1] [2] [3] [4] [5] [6] [7] [8] [9] Chapter 3 [10] [11]
[12] [13] [14] [15] [16] [17] Chapter 4 [18] [19] Chapter 5 [20] [21] [22]
[23] [24] Chapter 6 [25] [26] Chapter 7 [27] [28] [29] [30] [31] [32] [33]
[34] [35] [36] [37] [38] [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44]
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defuns, macros, cross references, insertions, (./epsf.tex
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) localization, formatting, and turning on texinfo input format.) (./R-FAQ.aux)
(/usr/share/texmf/tex/texinfo/txi-en.tex) [1{/var/lib/texmf/fonts/map/pdftex/up
dmap/pdftex.map}] (./R-FAQ.toc [-1] [-2]) [-3] (./R-FAQ.toc) (./R-FAQ.toc)
Chapter 1 Chapter 2 [1] [2] [3] [4] [5] [6] [7] [8] [9] Chapter 3 [10] [11]
[12] [13] [14] [15] [16] [17] Chapter 4 [18] [19] Chapter 5 [20] [21] [22]
[23] [24] Chapter 6 [25] [26] Chapter 7 [27] [28] [29] [30] [31] [32] [33]
[34] [35] [36] [37] [38] [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44]
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This is pdfTeX, Version 3.1415926-2.5-1.40.14 (TeX Live 2013/Debian)
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page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions, (./epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
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(./R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (./version.texi)
[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1
[1] Chapter 2 [2] Cross reference values unknown; you must run TeX again.
[3] [4] [5] [6] [7] [8] [9] Chapter 3 [10] [11] [12]
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l[] @textrm and in-stall it un-der @textttsl R_
[13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] Chapter 6 [19]
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hods"[] 
[20] [21]
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s. No ad-di-
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 []@texttt .../bin/x64/Rcmd check -l @textttsl lib-dir @texttt --extra-arch --i
nstall=check:@textttsl pkg@texttt .log @textttsl pkg[] 
Chapter 7 [27] [28] [29] Chapter 8 [30] Chapter 9 [31] [32] [33] Appendix A
[34] [35] [36] [37] [38] [39] [40] [41]
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 []@texttt ln -s /opt/acml5.1.0/gfortran64_mp/lib/libacml_mp.so @textttsl R_HOM
E@texttt /lib/libRblas.so[] 
[42] [43] Appendix B [44] [45] [46] [47] [48] [49] Appendix C [50] [51]
[52] [53] [54] [55] [56] [57]
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[]@textrm To see what com-pat-i-ble ver-sions of Java are cur-rently in-stalled
, run

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tents/Home[] 

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onfig[] 

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 []@texttt JAVA_CPPFLAGS="-I${JAVA_HOME}/../include -I${JAVA_HOME}/../include/s
olaris"[] 
[60] [61] [62] [63] [64] [65] Appendix D [66] [67] [68]
(Function and variable index) [69] (Concept index) [70]
(Environment variable index) [71] [72] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
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[2] (./R-admin.toc [-1] [-2]) [-3] [-4] (./R-admin.toc) (./R-admin.toc)
Chapter 1 [1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] Chapter 3 [10] [11]
[12]
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@textttsl R_HOME@texttt /src/gnuwin32[] @textrm should build @texttt Rbitmap.dl
l[] @textrm and in-stall it un-der @textttsl R_
[13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] Chapter 6 [19]
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 []@texttt [1] "datasets"  "utils"     "grDevices" "graphics"  "stats"     "met
hods"[] 
[20] [21]
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[]@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age
s. No ad-di-
[22] [23] [24] [25]
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[26]
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 []@texttt .../bin/x64/Rcmd check -l @textttsl lib-dir @texttt --extra-arch --i
nstall=check:@textttsl pkg@texttt .log @textttsl pkg[] 
Chapter 7 [27] [28] [29] Chapter 8 [30] Chapter 9 [31] [32] [33] Appendix A
[34] [35] [36] [37] [38] [39] [40] [41]
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 []@texttt ln -s /opt/acml5.1.0/gfortran64_mp/lib/libacml_mp.so @textttsl R_HOM
E@texttt /lib/libRblas.so[] 
[42] [43] Appendix B [44] [45] [46] [47] [48] [49] Appendix C [50] [51]
[52] [53] [54] [55] [56] [57]
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tents/Home[] 

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 []@texttt JAVA_CPPFLAGS="-I${JAVA_HOME}/../include -I${JAVA_HOME}/../include/s
olaris"[] 
[60] [61] [62] [63] [64] [65] Appendix D [66] [67] [68]
(Function and variable index) [69] (./R-admin.vrs) (Concept index) [70]
(./R-admin.cps) (Environment variable index) [71] (./R-admin.ens) [72] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
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s/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cm
r10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/sh
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Output written on R-admin.pdf (78 pages, 476057 bytes).
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Loading texinfo [version 2013-02-01.11]: pdf, fonts, markup, glyphs,
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This is `epsf.tex' v2.7.4 <14 February 2011>
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[2] (./R-admin.toc [-1] [-2]) [-3] [-4] (./R-admin.toc) (./R-admin.toc)
Chapter 1 [1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] Chapter 3 [10] [11]
[12]
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@textttsl R_HOME@texttt /src/gnuwin32[] @textrm should build @texttt Rbitmap.dl
l[] @textrm and in-stall it un-der @textttsl R_
[13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] Chapter 6 [19]
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 []@texttt [1] "datasets"  "utils"     "grDevices" "graphics"  "stats"     "met
hods"[] 
[20] [21]
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[]@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age
s. No ad-di-
[22] [23] [24] [25]
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[26]
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 []@texttt .../bin/x64/Rcmd check -l @textttsl lib-dir @texttt --extra-arch --i
nstall=check:@textttsl pkg@texttt .log @textttsl pkg[] 
Chapter 7 [27] [28] [29] Chapter 8 [30] Chapter 9 [31] [32] [33] Appendix A
[34] [35] [36] [37] [38] [39] [40] [41]
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 []@texttt ln -s /opt/acml5.1.0/gfortran64_mp/lib/libacml_mp.so @textttsl R_HOM
E@texttt /lib/libRblas.so[] 
[42] [43] Appendix B [44] [45] [46] [47] [48] [49] Appendix C [50] [51]
[52] [53] [54] [55] [56] [57]
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, run

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tents/Home[] 

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olaris"[] 
[60] [61] [62] [63] [64] [65] Appendix D [66] [67] [68]
(Function and variable index) [69] (./R-admin.vrs) (Concept index) [70]
(./R-admin.cps) (Environment variable index) [71] (./R-admin.ens) [72] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
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</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/sh
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Loading texinfo [version 2013-02-01.11]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions, (./epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
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(Acknowledgements)
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Chapter 1 [1] Cross reference values unknown; you must run TeX again. [2]
[3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14]
Chapter 4 [15] [16] [17] [18] [19] [20] [21] Chapter 5 [22] Chapter 6 [23]
Chapter 7 [24] [25] [26] [27] [28] Chapter 8 [29] Chapter 9 [30] Appendix A
[31] (Function and variable index) [32] (Concept index) [33] [34] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
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defuns, macros, cross references, insertions, (./epsf.tex
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) (./R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (./version.texi)
[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (./R-data.toc
[-1]) [-2] (./R-data.toc) (./R-data.toc) (Acknowledgements)
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 [][]@textbf xlsReadWrite[][]| 
Chapter 1 [1] [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12]
Chapter 3 [13] [14] Chapter 4 [15] [16] [17] [18] [19] [20] [21] Chapter 5
[22] Chapter 6 [23] Chapter 7 [24] [25] [26] [27] [28] Chapter 8 [29]
Chapter 9 [30] Appendix A [31] (Function and variable index) [32] (./R-data.vrs
[33]) (Concept index) [34] (./R-data.cps) [35] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></u
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fonts/type1/public/amsfonts/cm/cmtt9.pfb>
Output written on R-data.pdf (39 pages, 310019 bytes).
Transcript written on R-data.log.
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page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions, (./epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.) (./R-data.aux
) (./R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (./version.texi)
[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (./R-data.toc
[-1]) [-2] (./R-data.toc) (./R-data.toc) (Acknowledgements)
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 [][]@textbf dataframes2xls[][]| 

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 [][]@textbf RPostgreSQL[][]| 

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 [][]@textbf xlsReadWrite[][]| 
Chapter 1 [1] [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12]
Chapter 3 [13] [14] Chapter 4 [15] [16] [17] [18] [19] [20] [21] Chapter 5
[22] Chapter 6 [23] Chapter 7 [24] [25] [26] [27] [28] Chapter 8 [29]
Chapter 9 [30] Appendix A [31] (Function and variable index) [32] (./R-data.vrs
[33]) (Concept index) [34] (./R-data.cps) [35] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/
cm/cmr10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></u
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TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-exts.texi
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page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions, (./epsf.tex
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(./R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (./version.texi)
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(Acknowledgements) Chapter 1 [1]
Cross reference values unknown; you must run TeX again. [2] [3] [4] [5]
[6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21]
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 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF
LAGS)[] 
[22] [23] [24] [25]
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 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c
pp model/*/*.cpp model/*/*/*.cpp)[] 

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 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien
a07models.o $(SOURCES:.cpp=.o)[] 
[26] [27]
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 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar
e defined.[]  
[28]
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[][][]@smallrm On sys-tems which use sub-architectures, architecture-specific v
er-sions such as @smalltt ~/.R/check.Renviron.i386[]
[29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43]
[44] [45] [46] [47] [48] [49] [50]
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 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@
euro"[] 
[51] [52]
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 []@texttt #define dngettext(pkg, String, StringP, N) (N > 1 ? StringP : String
)[] 
[53] [54] [55] Chapter 2 [56] [57] [58] [59] [60] [61] [62] [63] [64] [65]
[66] [67] [68]
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[]@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi
lename@texttt }[] @textrm and
[69] [70] [71] [72] [73] [74] Chapter 3 [75] [76] [77] [78] [79] [80] [81]
Chapter 4 [82] [83] [84]
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 []@texttt evaluation nested too deeply: infinite recursion / options(expressio
ns=)?[] 
[85]
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 []@smalltt Message:  Error: no valid set of coefficients has been found: pleas
e supply starting values[] 
[86]
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 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star
t, etastart = etastart,[] 

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[]@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by
 e.g. @texttt debug(stats:::predict.Arima)[]@textrm .
[87] [88] [89] [90]
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 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u
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[91]
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 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl
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[92]
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 []@texttt #5  0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9
698f98,[] 
[93] [94] Chapter 5 [95] [96] [97] [98] [99] [100] [101] [102] [103] [104]
[105] [106] [107]
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 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath -Wl,"$(PKGB_PATH)$(R_A
RCH)" -lpackB[] 
[108] [109] [110] [111] [112] [113] [114] [115] [116] [117]
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 []    @texttt if(ign == NA_LOGICAL) error("'ignore_quotes' must be TRUE or FAL
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[118]
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[]@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated
3[] @textrm are fast ver-sions of R's
[119] [120] [121] [122] [123] [124] [125] [126]
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 []    @texttt gradient = PROTECT(allocMatrix(REALSXP, LENGTH(ans), LENGTH(thet
a)));[] 

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ho));[] 
[127]
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[128]
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alue));[] 
[129] [130]
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[131]
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[132]
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 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_SYMBOL, CE_ANY} cety
pe_t;[] 
[133] Chapter 6 [134] [135] [136] [137] [138] [139] [140] [141] [142] [143]
[144] [145] [146] [147] [148] [149] [150] [151] [152] Chapter 7 [153] [154]
Chapter 8 [155] [156] [157]
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tatic libR[] 
[158]
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[159] [160] [161]
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 @texttt modules/internet/nanoftp.c[]@textrm , @texttt src/modules/internet/nan
ohttp.c[] @textrm and @texttt src/
[162] [163] [164] [165] [166] [167] (Function and variable index) [168]

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(Concept index) [169] [170] )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
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page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions, (./epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.) (./R-exts.aux
) (./R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (./version.texi)
[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (./R-exts.toc
[-1] [-2] [-3]) [-4] [-5] (./R-exts.toc) (./R-exts.toc) (Acknowledgements)
Chapter 1 [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15]
[16] [17] [18] [19] [20] [21]
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[22] [23] [24] [25]
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[26] [27]
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[28]
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[29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43]
[44] [45] [46] [47] [48] [49] [50]
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[51] [52]
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 []@texttt #define dngettext(pkg, String, StringP, N) (N > 1 ? StringP : String
)[] 
[53] [54] [55] Chapter 2 [56] [57] [58] [59] [60] [61] [62] [63] [64] [65]
[66] [67] [68]
Underfull \hbox (badness 10000) in paragraph at lines 5378--5385
[]@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi
lename@texttt }[] @textrm and
[69] [70] [71] [72] [73] [74] Chapter 3 [75] [76] [77] [78] [79] [80] [81]
Chapter 4 [82] [83] [84]
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 []@texttt evaluation nested too deeply: infinite recursion / options(expressio
ns=)?[] 
[85]
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 []@smalltt Message:  Error: no valid set of coefficients has been found: pleas
e supply starting values[] 
[86]
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 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star
t, etastart = etastart,[] 

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[]@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by
 e.g. @texttt debug(stats:::predict.Arima)[]@textrm .
[87] [88] [89] [90]
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 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u
pper bound of 0[] 
[91]
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 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl
assi,[] 

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 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t(
cu)),[] 
[92]
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 []@texttt #5  0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9
698f98,[] 
[93] [94] Chapter 5 [95] [96] [97] [98] [99] [100] [101] [102] [103] [104]
[105] [106] [107]
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 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath -Wl,"$(PKGB_PATH)$(R_A
RCH)" -lpackB[] 
[108] [109] [110] [111] [112] [113] [114] [115] [116] [117]
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 []    @texttt if(ign == NA_LOGICAL) error("'ignore_quotes' must be TRUE or FAL
SE");[] 
[118]
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[]@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated
3[] @textrm are fast ver-sions of R's
[119] [120] [121] [122] [123] [124] [125] [126]
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 []    @texttt gradient = PROTECT(allocMatrix(REALSXP, LENGTH(ans), LENGTH(thet
a)));[] 

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 []    @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an
s)) {[] 

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 []        @texttt par = PROTECT(findVar(install(CHAR(STRING_ELT(theta, i))), r
ho));[] 
[127]
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 []    @texttt gradient = PROTECT(allocMatrix(REALSXP, LENGTH(ans), LENGTH(thet
a)));[] 

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 []    @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an
s)) {[] 

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 []        @texttt par = PROTECT(findVar(install(CHAR(STRING_ELT(theta, i))), r
ho));[] 
[128]
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 []        @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV
alue));[] 
[129] [130]
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 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one
xit);[] 
[131]
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 []    @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_
NilValue);[] 
[132]
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 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_SYMBOL, CE_ANY} cety
pe_t;[] 
[133] Chapter 6 [134] [135] [136] [137] [138] [139] [140] [141] [142] [143]
[144] [145] [146] [147] [148] [149] [150] [151] Chapter 7 [152] [153]
Chapter 8 [154] [155] [156]
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 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s
tatic libR[] 
[157]
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 []@texttt extern int  (*ptr_R_ReadConsole)(const char *, unsigned char *, int,
 int);[] 

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 []@texttt extern int  (*ptr_R_EditFiles)(int, const char **, const char **, co
nst char *);[] 
[158] [159] [160]
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 @texttt modules/internet/nanoftp.c[]@textrm , @texttt src/modules/internet/nan
ohttp.c[] @textrm and @texttt src/
[161] [162] [163] [164] [165] [166] (Function and variable index) [167]
(./R-exts.vrs [168] [169]) (Concept index) [170] (./R-exts.cps [171]) [172] )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/ecrm1095.603pk></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
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onts/cm/cmss10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmsy10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy
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</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti9.pfb></usr/s
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exlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt12.pfb></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/latxfont/lcircle1.pfb>
Output written on R-exts.pdf (179 pages, 835828 bytes).
Transcript written on R-exts.log.
This is pdfTeX, Version 3.1415926-2.5-1.40.14 (TeX Live 2013/Debian)
 restricted \write18 enabled.
entering extended mode
(/«PKGBUILDDIR»/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi
(/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2013-02-01.11]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions, (./epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.) (./R-exts.aux
) (./R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (./version.texi)
[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (./R-exts.toc
[-1] [-2] [-3]) [-4] [-5] (./R-exts.toc) (./R-exts.toc) (Acknowledgements)
Chapter 1 [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15]
[16] [17] [18] [19] [20] [21]
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 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF
LAGS)[] 
[22] [23] [24] [25]
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 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c
pp model/*/*.cpp model/*/*/*.cpp)[] 

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 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien
a07models.o $(SOURCES:.cpp=.o)[] 
[26] [27]
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 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar
e defined.[]  
[28]
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[][][]@smallrm On sys-tems which use sub-architectures, architecture-specific v
er-sions such as @smalltt ~/.R/check.Renviron.i386[]
[29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43]
[44] [45] [46] [47] [48] [49] [50]
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 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@
euro"[] 
[51] [52]
Overfull \hbox (13.62822pt too wide) in paragraph at lines 4167--4167
 []@texttt #define dngettext(pkg, String, StringP, N) (N > 1 ? StringP : String
)[] 
[53] [54] [55] Chapter 2 [56] [57] [58] [59] [60] [61] [62] [63] [64] [65]
[66] [67] [68]
Underfull \hbox (badness 10000) in paragraph at lines 5378--5385
[]@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi
lename@texttt }[] @textrm and
[69] [70] [71] [72] [73] [74] Chapter 3 [75] [76] [77] [78] [79] [80] [81]
Chapter 4 [82] [83] [84]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 6506--6506
 []@texttt evaluation nested too deeply: infinite recursion / options(expressio
ns=)?[] 
[85]
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 []@smalltt Message:  Error: no valid set of coefficients has been found: pleas
e supply starting values[] 
[86]
Overfull \hbox (20.53261pt too wide) in paragraph at lines 6650--6650
 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star
t, etastart = etastart,[] 

Overfull \hbox (38.96663pt too wide) in paragraph at lines 6680--6689
[]@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by
 e.g. @texttt debug(stats:::predict.Arima)[]@textrm .
[87] [88] [89] [90]
Overfull \hbox (72.42863pt too wide) in paragraph at lines 6985--6985
 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u
pper bound of 0[] 
[91]
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 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl
assi,[] 

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 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t(
cu)),[] 
[92]
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 []@texttt #5  0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9
698f98,[] 
[93] [94] Chapter 5 [95] [96] [97] [98] [99] [100] [101] [102] [103] [104]
[105] [106] [107]
Overfull \hbox (60.93126pt too wide) in paragraph at lines 8264--8264
 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath -Wl,"$(PKGB_PATH)$(R_A
RCH)" -lpackB[] 
[108] [109] [110] [111] [112] [113] [114] [115] [116] [117]
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 []    @texttt if(ign == NA_LOGICAL) error("'ignore_quotes' must be TRUE or FAL
SE");[] 
[118]
Underfull \hbox (badness 10000) in paragraph at lines 9085--9087
[]@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated
3[] @textrm are fast ver-sions of R's
[119] [120] [121] [122] [123] [124] [125] [126]
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 []    @texttt gradient = PROTECT(allocMatrix(REALSXP, LENGTH(ans), LENGTH(thet
a)));[] 

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 []    @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an
s)) {[] 

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 []        @texttt par = PROTECT(findVar(install(CHAR(STRING_ELT(theta, i))), r
ho));[] 
[127]
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 []    @texttt gradient = PROTECT(allocMatrix(REALSXP, LENGTH(ans), LENGTH(thet
a)));[] 

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 []    @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an
s)) {[] 

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 []        @texttt par = PROTECT(findVar(install(CHAR(STRING_ELT(theta, i))), r
ho));[] 
[128]
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 []        @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV
alue));[] 
[129] [130]
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 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one
xit);[] 
[131]
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 []    @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_
NilValue);[] 
[132]
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 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_SYMBOL, CE_ANY} cety
pe_t;[] 
[133] Chapter 6 [134] [135] [136] [137] [138] [139] [140] [141] [142] [143]
[144] [145] [146] [147] [148] [149] [150] [151] Chapter 7 [152] [153]
Chapter 8 [154] [155] [156]
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 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s
tatic libR[] 
[157]
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 []@texttt extern int  (*ptr_R_ReadConsole)(const char *, unsigned char *, int,
 int);[] 

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 []@texttt extern int  (*ptr_R_EditFiles)(int, const char **, const char **, co
nst char *);[] 
[158] [159] [160]
Underfull \hbox (badness 10000) in paragraph at lines 12371--12378
 @texttt modules/internet/nanoftp.c[]@textrm , @texttt src/modules/internet/nan
ohttp.c[] @textrm and @texttt src/
[161] [162] [163] [164] [165] [166] (Function and variable index) [167]
(./R-exts.vrs [168] [169]) (Concept index) [170] (./R-exts.cps [171]) [172] )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/ecrm1095.603pk></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi
10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi12.pfb
></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/
share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/texlive/texmf-dist/fonts
/type1/public/amsfonts/cm/cmr9.pfb></usr/share/texlive/texmf-dist/fonts/type1/p
ublic/amsfonts/cm/cmsl10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/
amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsf
onts/cm/cmss10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
m/cmsy10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy
7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti9.pfb></usr/s
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exlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt12.pfb></usr/share/texlive
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dist/fonts/type1/public/amsfonts/latxfont/lcircle1.pfb>
Output written on R-exts.pdf (179 pages, 836105 bytes).
Transcript written on R-exts.log.
This is pdfTeX, Version 3.1415926-2.5-1.40.14 (TeX Live 2013/Debian)
 restricted \write18 enabled.
entering extended mode
(/«PKGBUILDDIR»/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi
(/usr/share/texmf/tex/texinfo/texinfo.tex
Loading texinfo [version 2013-02-01.11]: pdf, fonts, markup, glyphs,
page headings, tables, conditionals, indexing, sectioning, toc, environments,
defuns, macros, cross references, insertions, (./epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.) (./R-exts.aux
) (./R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (./version.texi)
[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (./R-exts.toc
[-1] [-2] [-3]) [-4] [-5] (./R-exts.toc) (./R-exts.toc) (Acknowledgements)
Chapter 1 [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15]
[16] [17] [18] [19] [20] [21]
Overfull \hbox (14.94176pt too wide) in paragraph at lines 1711--1711
 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF
LAGS)[] 
[22] [23] [24] [25]
Overfull \hbox (67.78206pt too wide) in paragraph at lines 1986--1986
 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c
pp model/*/*.cpp model/*/*/*.cpp)[] 

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 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien
a07models.o $(SOURCES:.cpp=.o)[] 
[26] [27]
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 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar
e defined.[]  
[28]
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[][][]@smallrm On sys-tems which use sub-architectures, architecture-specific v
er-sions such as @smalltt ~/.R/check.Renviron.i386[]
[29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43]
[44] [45] [46] [47] [48] [49] [50]
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 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@
euro"[] 
[51] [52]
Overfull \hbox (13.62822pt too wide) in paragraph at lines 4167--4167
 []@texttt #define dngettext(pkg, String, StringP, N) (N > 1 ? StringP : String
)[] 
[53] [54] [55] Chapter 2 [56] [57] [58] [59] [60] [61] [62] [63] [64] [65]
[66] [67] [68]
Underfull \hbox (badness 10000) in paragraph at lines 5378--5385
[]@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi
lename@texttt }[] @textrm and
[69] [70] [71] [72] [73] [74] Chapter 3 [75] [76] [77] [78] [79] [80] [81]
Chapter 4 [82] [83] [84]
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 []@texttt evaluation nested too deeply: infinite recursion / options(expressio
ns=)?[] 
[85]
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 []@smalltt Message:  Error: no valid set of coefficients has been found: pleas
e supply starting values[] 
[86]
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 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star
t, etastart = etastart,[] 

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[]@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by
 e.g. @texttt debug(stats:::predict.Arima)[]@textrm .
[87] [88] [89] [90]
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 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u
pper bound of 0[] 
[91]
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 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl
assi,[] 

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 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t(
cu)),[] 
[92]
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 []@texttt #5  0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9
698f98,[] 
[93] [94] Chapter 5 [95] [96] [97] [98] [99] [100] [101] [102] [103] [104]
[105] [106] [107]
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 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath -Wl,"$(PKGB_PATH)$(R_A
RCH)" -lpackB[] 
[108] [109] [110] [111] [112] [113] [114] [115] [116] [117]
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[118]
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[]@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated
3[] @textrm are fast ver-sions of R's
[119] [120] [121] [122] [123] [124] [125] [126]
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a)));[] 

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s)) {[] 

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[127]
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[128]
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[129] [130]
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[131]
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[132]
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 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_SYMBOL, CE_ANY} cety
pe_t;[] 
[133] Chapter 6 [134] [135] [136] [137] [138] [139] [140] [141] [142] [143]
[144] [145] [146] [147] [148] [149] [150] [151] Chapter 7 [152] [153]
Chapter 8 [154] [155] [156]
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tatic libR[] 
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[158] [159] [160]
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 @texttt modules/internet/nanoftp.c[]@textrm , @texttt src/modules/internet/nan
ohttp.c[] @textrm and @texttt src/
[161] [162] [163] [164] [165] [166] (Function and variable index) [167]
(./R-exts.vrs [168] [169]) (Concept index) [170] (./R-exts.cps [171]) [172] )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/ecrm1095.603pk></usr/share/texlive/texmf-dist/fonts/type1/public/ams
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TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-intro.texi
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(./R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (./version.texi)
[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Preface)
Cross reference values unknown; you must run TeX again. Chapter 1 [1] [2]
[3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14]
Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] [25]
[26] Chapter 6 [27] [28] [29] [30] Chapter 7 [31] [32] [33] Chapter 8 [34]
[35] [36] <./images/hist.pdf> <./images/ecdf.pdf> [37] <./images/QQ.pdf>
[38] <./images/ice.pdf> [39] [40] Chapter 9 [41] [42] Chapter 10 [43] [44]
[45] [46] [47] [48] [49] [50] [51] Chapter 11 [52] [53] [54] [55] [56] [57]
[58] [59] [60] [61] [62] [63] [64] [65] Chapter 12 [66] [67] [68] [69] [70]
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[71] [72] [73] [74] [75] <./images/fig11.pdf> [76] <./images/fig12.pdf>
[77] [78] [79] [80] Chapter 13 [81]
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[]@textrm Users con-nected to the In-ter-net can use the @texttt install.packag
es()[] @textrm and
[82] Chapter 14 [83] [84]
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 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t
extrm and
[85] Appendix A [86] [87] [88] [89] Appendix B [90] [91] [92] [93] [94]
[95] [96] [97] Appendix C [98] [99] Appendix D [100] Appendix E [101]
Appendix F [102] [103] )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
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defuns, macros, cross references, insertions, (./epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
(./R-intro.aux) (./R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex))
(./version.texi) [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}]
[2] (./R-intro.toc [-1] [-2] [-3]) [-4] (./R-intro.toc) (./R-intro.toc)
(Preface) Chapter 1 [1] [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11]
Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20]
[21] [22] [23] [24] [25] [26] Chapter 6 [27] [28] [29] [30] Chapter 7 [31]
[32] [33] Chapter 8 [34] [35] [36] <./images/hist.pdf> <./images/ecdf.pdf>
[37] <./images/QQ.pdf> [38] <./images/ice.pdf> [39] [40] Chapter 9 [41]
[42] Chapter 10 [43] [44] [45] [46] [47] [48] [49] [50] [51] Chapter 11
[52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] [63] [64] [65]
Chapter 12 [66] [67] [68] [69] [70]
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[71] [72] [73] [74] [75] <./images/fig11.pdf> [76] <./images/fig12.pdf>
[77] [78] [79] [80] Chapter 13 [81]
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[]@textrm Users con-nected to the In-ter-net can use the @texttt install.packag
es()[] @textrm and
[82] Chapter 14 [83] [84]
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 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t
extrm and
[85] Appendix A [86] [87] [88] [89] Appendix B [90] [91] [92] [93] [94]
[95] [96] [97] Appendix C [98] [99] Appendix D [100] (./R-intro.vrs [101]
[102]) Appendix E [103] (./R-intro.cps [104]) Appendix F [105] [106] )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/ecrm1095.603pk></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
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defuns, macros, cross references, insertions, (./epsf.tex
This is `epsf.tex' v2.7.4 <14 February 2011>
) localization, formatting, and turning on texinfo input format.)
(./R-intro.aux) (./R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex))
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[2] (./R-intro.toc [-1] [-2] [-3]) [-4] (./R-intro.toc) (./R-intro.toc)
(Preface) Chapter 1 [1] [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11]
Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20]
[21] [22] [23] [24] [25] [26] Chapter 6 [27] [28] [29] [30] Chapter 7 [31]
[32] [33] Chapter 8 [34] [35] [36] <./images/hist.pdf> <./images/ecdf.pdf>
[37] <./images/QQ.pdf> [38] <./images/ice.pdf> [39] [40] Chapter 9 [41]
[42] Chapter 10 [43] [44] [45] [46] [47] [48] [49] [50] [51] Chapter 11
[52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] [63] [64] [65]
Chapter 12 [66] [67] [68] [69] [70]
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[71] [72] [73] [74] [75] <./images/fig11.pdf> [76] <./images/fig12.pdf>
[77] [78] [79] [80] Chapter 13 [81]
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[]@textrm Users con-nected to the In-ter-net can use the @texttt install.packag
es()[] @textrm and
[82] Chapter 14 [83] [84]
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 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t
extrm and
[85] Appendix A [86] [87] [88] [89] Appendix B [90] [91] [92] [93] [94]
[95] [96] [97] Appendix C [98] [99] Appendix D [100] (./R-intro.vrs [101]
[102]) Appendix E [103] (./R-intro.cps [104]) Appendix F [105] [106] )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/ecrm1095.603pk></usr/share/texlive/texmf-dist/fonts/type1/public/ams
fonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c
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7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmcsc10.pfb
></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb></usr
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(./R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (./version.texi)
[1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1
[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17]
[18] [19] [20] [21] [22] [23] Chapter 2 [24]
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mes(x))[] 
[25] [26] [27] [28] Chapter 3 [29] [30] Chapter 4 [31] [32] Chapter 5 [33]
Chapter 6 [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45]
Chapter 7 [46] [47]
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@texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl
ib[]@textrm ,
[48] Chapter 8 [49] [50] [51] [52] [53]
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 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa
tchArgs = FALSE[] @textrm and
[54] Chapter 9 [55] [56] Chapter 10 [57] Chapter 11 [58] Chapter 12 [59]
[60] (Function and variable index) [61] (Concept index) [62] [63] )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
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[5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20]
[21] [22] [23] Chapter 2 [24]
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mes(x))[] 
[25] [26] [27] [28] Chapter 3 [29] [30] Chapter 4 [31] [32] Chapter 5 [33]
Chapter 6 [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45]
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@texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl
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[48] Chapter 8 [49] [50] [51] [52] [53]
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tchArgs = FALSE[] @textrm and
[54] Chapter 9 [55] [56] Chapter 10 [57] Chapter 11 [58] Chapter 12 [59]
[60] (Function and variable index) [61] (./R-ints.vrs [62]) (Concept index)
[63] (./R-ints.cps) [64] )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/ecrm1095.603pk></usr/share/texlive/texmf-dist/fonts/type1/public/ams
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10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi12.pfb
></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb></usr/
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This is `epsf.tex' v2.7.4 <14 February 2011>
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[-1]) [-2] [-3] (./R-ints.toc) (./R-ints.toc) Chapter 1 [1] [2] [3] [4]
[5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20]
[21] [22] [23] Chapter 2 [24]
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 []    @texttt if (!is.character(x)) x <- structure(as.character(x), names = na
mes(x))[] 
[25] [26] [27] [28] Chapter 3 [29] [30] Chapter 4 [31] [32] Chapter 5 [33]
Chapter 6 [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] [44] [45]
Chapter 7 [46] [47]
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@textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a 
sym-bolic link,

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@texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl
ib[]@textrm ,
[48] Chapter 8 [49] [50] [51] [52] [53]
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 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa
tchArgs = FALSE[] @textrm and
[54] Chapter 9 [55] [56] Chapter 10 [57] Chapter 11 [58] Chapter 12 [59]
[60] (Function and variable index) [61] (./R-ints.vrs [62]) (Concept index)
[63] (./R-ints.cps) [64] )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
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m/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi
10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi12.pfb
></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi9.pfb></usr/
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[3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16]
[17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] [28]
Chapter 5 [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39]
[40] [41] [42] Chapter 7 [43] [44] [45] Chapter 8 [46] [47] Chapter 9 [48]
[49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58]
(Function and Variable Index) [59] (Concept Index) [60] Appendix A [61]
[62] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
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[3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16]
[17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] [28]
Chapter 5 [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39]
[40] [41] [42] Chapter 7 [43] [44] [45] Chapter 8 [46] [47] Chapter 9 [48]
[49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58]
(Function and Variable Index) [59] (./R-lang.vrs [60]) (Concept Index) [61]
(./R-lang.cps) Appendix A [62] [63] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
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[3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16]
[17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] [28]
Chapter 5 [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39]
[40] [41] [42] Chapter 7 [43] [44] [45] Chapter 8 [46] [47] Chapter 9 [48]
[49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58]
(Function and Variable Index) [59] (./R-lang.vrs [60]) (Concept Index) [61]
(./R-lang.cps) Appendix A [62] [63] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
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make[1]: Leaving directory `/«PKGBUILDDIR»'
dh_movefiles	--sourcedir=debian/r-base-core -pr-doc-pdf
dh_movefiles	--sourcedir=debian/r-base-core -pr-doc-html
touch install-indep-stamp
gunzip -9v /«PKGBUILDDIR»/debian/r-base-core/usr/share/info/*.gz
/«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-FAQ.info.gz:	 67.0% -- replaced with /«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-FAQ.info
/«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-admin.info.gz:	 68.3% -- replaced with /«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-admin.info
/«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-data.info.gz:	 70.6% -- replaced with /«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-data.info
/«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-exts.info-1.gz:	 66.9% -- replaced with /«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-exts.info-1
/«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-exts.info-2.gz:	 71.8% -- replaced with /«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-exts.info-2
/«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-exts.info.gz:	 65.9% -- replaced with /«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-exts.info
/«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-intro.info.gz:	 70.0% -- replaced with /«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-intro.info
/«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-ints.info.gz:	 67.7% -- replaced with /«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-ints.info
/«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-lang.info.gz:	 71.7% -- replaced with /«PKGBUILDDIR»/debian/r-base-core/usr/share/info/R-lang.info
dh_movefiles	--sourcedir=debian/r-base-core -pr-doc-info
rm -vf	/«PKGBUILDDIR»/debian/r-doc-info/usr/share/info/dir		\
		/«PKGBUILDDIR»/debian/r-doc-info/usr/share/info/dir.old	
removed '/«PKGBUILDDIR»/debian/r-doc-info/usr/share/info/dir'
dh_installdirs -pr-mathlib usr/include usr/lib \
					usr/share/lintian/overrides \
					usr/lib/pkgconfig
dh_movefiles	--sourcedir=debian/r-base-core -pr-mathlib
(cd /«PKGBUILDDIR»/debian/r-mathlib/usr/lib; \
			ls -l ; \
			mv -v  libRmath.so 	     libRmath.so.1.0.0; \
			ln -sv libRmath.so.1.0.0 libRmath.so.1; \
			ln -sv libRmath.so.1  libRmath.so)
total 1944
-rw-rw-r-- 1 root root 1222652 Oct  8 00:56 libRmath.a
-rwxrwxr-x 1 root root  764696 Oct  8 00:56 libRmath.so
drwxr-xr-x 1 root root      22 Oct  8 01:10 pkgconfig
'libRmath.so' -> 'libRmath.so.1.0.0'
'libRmath.so.1' -> 'libRmath.so.1.0.0'
'libRmath.so' -> 'libRmath.so.1'
install -m 0644 src/include/Rmath.h			\
			/«PKGBUILDDIR»/debian/r-mathlib/usr/include
install -m 0644 debian/Rprofile.site /«PKGBUILDDIR»/debian/r-base-core/etc/R
install -m 0644 debian/Renviron.site /«PKGBUILDDIR»/debian/r-base-core/etc/R
(cd /«PKGBUILDDIR»/debian/r-base-core/usr/lib/R/etc; \
		cat /«PKGBUILDDIR»/debian/Renviron-R_LIBS.patch | patch --verbose;	\
		mv Makeconf repositories ldpaths ../../../../etc/R/;	\
		mv Renviron Renviron.ucf;				\
		ln -s  /etc/R/Makeconf	.;				\
		ln -s  /etc/R/Renviron	.;				\
		ln -s  /etc/R/Renviron.site .;				\
		ln -s  /etc/R/Rprofile.site .;				\
		ln -s  /etc/R/ldpaths   .;                              \
		ln -s  /etc/R/repositories .				)
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|--- Renviron.orig	2003-04-04 06:52:22.000000000 -0500
|+++ Renviron	2003-04-04 06:49:05.000000000 -0500
--------------------------
patching file Renviron
Using Plan A...
Hunk #1 succeeded at 43 with fuzz 2 (offset 10 lines).
done
install -m 0644 debian/R.bash_completion	\
		debian/r-base-core/etc/bash_completion.d/R
(cd /«PKGBUILDDIR»/debian/r-base-core/usr/lib/; \
		ln -sv R/lib/libR.so . )
'./libR.so' -> 'R/lib/libR.so'
# edd 21 Jun 2012  add icon and desktop file from Philip Johnson's patch
(cd debian/icon-class-patch && munpack rlogo_icon.png.mpack)
rlogo_icon.png (application/octet-stream)
install -m 0644 debian/icon-class-patch/rlogo_icon.png	\
		debian/r-base-core/usr/share/icons/hicolor/48x48/apps
install -m 0644 debian/icon-class-patch/R.desktop		\
		debian/r-base-core/usr/share/applications
rm debian/icon-class-patch/rlogo_icon.png
touch install-arch-stamp
*** binary-arch ***
dh_testdir -a
dh_testroot -a
dh_installdocs -pr-base-core NEWS.* README \
					debian/README.Atlas \
					debian/README.mathlib
dh_installdocs -pr-mathlib  NEWS.* README \
					debian/README.mathlib
dh_installdocs -pr-base-core-dbg				
dh_installexamples -pr-mathlib	src/nmath/standalone/test.c
dh_installmenu -a
# (cd /«PKGBUILDDIR»/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../../lib/R/doc .)
(cd /«PKGBUILDDIR»/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../R/doc .)
(cd /«PKGBUILDDIR»/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../../lib/R/library .)
install -p -m 0644  debian/r-base-core.lintian \
	   /«PKGBUILDDIR»/debian/r-base-core/usr/share/lintian/overrides/r-base-core
install -p -m 0644  debian/r-recommended.lintian \
	   /«PKGBUILDDIR»/debian/r-recommended/usr/share/lintian/overrides/r-recommended
install -p -m 0644  debian/r-mathlib.lintian \
	   /«PKGBUILDDIR»/debian/r-mathlib/usr/share/lintian/overrides/r-mathlib
dh_installchangelogs -a	-k NEWS 
dh_strip	--sourcedir=/«PKGBUILDDIR»/debian/r-base-core --dbg-package=r-base-core-dbg
Unknown option: sourcedir
dh_strip 	--sourcedir=/«PKGBUILDDIR»/debian/r-mathlib
Unknown option: sourcedir
dh_compress -a
dh_fixperms -a
dh_link -a
dh_makeshlibs -a
dh_installdeb -a
dh_perl -a
dh_shlibdeps -a -l /«PKGBUILDDIR»/debian/r-base-core/usr/lib/R/lib
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: Can't extract name and version from library name `libR.so'
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-base-core/usr/lib/R/modules/R_X11.so debian/r-base-core/usr/lib/R/modules/R_de.so debian/r-base-core/usr/lib/R/library/grDevices/libs/cairo.so were not linked against libglib-2.0.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-base-core/usr/lib/R/modules/R_X11.so debian/r-base-core/usr/lib/R/modules/R_de.so were not linked against libICE.so.6 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-base-core/usr/lib/R/library/tcltk/libs/tcltk.so was not linked against libXss.so.1 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-base-core/usr/lib/R/modules/R_X11.so debian/r-base-core/usr/lib/R/modules/R_de.so were not linked against libSM.so.6 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-base-core/usr/lib/R/library/tcltk/libs/tcltk.so debian/r-base-core/usr/lib/R/modules/R_X11.so debian/r-base-core/usr/lib/R/modules/R_de.so were not linked against libXext.so.6 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/r-mathlib/usr/lib/libRmath.so.1.0.0 was not linked against libgomp.so.1 (it uses none of the library's symbols)
dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package r-base-core: unknown substitution variable ${perl:Depends}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package `r-base-core-dbg' in `../r-base-core-dbg_3.0.2-1_armhf.deb'.
dpkg-deb: building package `r-base-core' in `../r-base-core_3.0.2-1_armhf.deb'.
dpkg-deb: building package `r-mathlib' in `../r-mathlib_3.0.2-1_armhf.deb'.
 dpkg-genchanges -B -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../r-base_3.0.2-1_armhf.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
 dpkg-source --after-build r-base-3.0.2
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20131008-0112

Finished
────────

I: Built successfully

┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘


r-base_3.0.2-1_armhf.changes:
─────────────────────────────

Format: 1.8
Date: Wed, 25 Sep 2013 05:55:00 -0500
Source: r-base
Binary: r-base r-base-core r-base-dev r-mathlib r-base-html r-doc-pdf r-doc-html r-doc-info r-recommended r-base-core-dbg
Architecture: armhf
Version: 3.0.2-1
Distribution: jessie-staging
Urgency: low
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Dirk Eddelbuettel <edd@debian.org>
Description: 
 r-base     - GNU R statistical computation and graphics system
 r-base-core - GNU R core of statistical computation and graphics system
 r-base-core-dbg - GNU R debug symbols for statistical comp. language and environmen
 r-base-dev - GNU R installation of auxiliary GNU R packages
 r-base-html - GNU R html docs for statistical computing system functions
 r-doc-html - GNU R html manuals for statistical computing system
 r-doc-info - GNU R info manuals statistical computing system
 r-doc-pdf  - GNU R pdf manuals for statistical computing system
 r-mathlib  - GNU R standalone mathematics library
 r-recommended - GNU R collection of recommended packages [metapackage]
Changes: 
 r-base (3.0.2-1) unstable; urgency=low
 .
   * New upstream version released this morning
 .
   * debian/arm-perl-regexp.patch: Re-apply ARM patch for regexp
Checksums-Sha1: 
 c29940a07cd6782c09f07b4d717a743258659485 21219820 r-base-core_3.0.2-1_armhf.deb
 b6fe04fe2ecd74bf97bb9d60810bd6889f17e708 852640 r-mathlib_3.0.2-1_armhf.deb
 d5a1c3298bca98864102ca6236bd83584c6e45d5 3769058 r-base-core-dbg_3.0.2-1_armhf.deb
Checksums-Sha256: 
 ba95c7abb61cd3e7a5e98de34f7751a704db7f6f7057fe363434a5abc8d9ecef 21219820 r-base-core_3.0.2-1_armhf.deb
 7c24f10346b216410d0304c23e6045e714a51d7e6ac33aa63018a44471f20381 852640 r-mathlib_3.0.2-1_armhf.deb
 9e4e297f11955ef93d508e237a9db985fe01f6bb484ce44aca50e41a0e194901 3769058 r-base-core-dbg_3.0.2-1_armhf.deb
Files: 
 575ecbfdeb74eef26602c4a61c5d54fa 21219820 gnu-r optional r-base-core_3.0.2-1_armhf.deb
 66bcd7dd1c334d74eef6b7136d1b1315 852640 gnu-r optional r-mathlib_3.0.2-1_armhf.deb
 3f4a1a95ea10eff7e0aa55db6b297bc3 3769058 debug extra r-base-core-dbg_3.0.2-1_armhf.deb

┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents                                                             │
└──────────────────────────────────────────────────────────────────────────────┘


r-base-core_3.0.2-1_armhf.deb
─────────────────────────────

 new debian package, version 2.0.
 size 21219820 bytes: control archive=28513 bytes.
     118 bytes,     6 lines      conffiles            
    2707 bytes,    44 lines      control              
   74429 bytes,   943 lines      md5sums              
    2396 bytes,    70 lines   *  postinst             #!/bin/sh
     160 bytes,     5 lines   *  postrm               #!/bin/sh
     667 bytes,    34 lines   *  preinst              #!/bin/sh
     689 bytes,    26 lines   *  prerm                #!/bin/sh
      30 bytes,     1 lines      shlibs               
 Package: r-base-core
 Source: r-base
 Version: 3.0.2-1
 Architecture: armhf
 Maintainer: Dirk Eddelbuettel <edd@debian.org>
 Installed-Size: 29871
 Depends: zip, unzip, libpaper-utils, xdg-utils, libblas3 | libblas.so.3, libbz2-1.0, libc6 (>= 2.16), libcairo2 (>= 1.6.0), libgfortran3 (>= 4.3), libglib2.0-0 (>= 2.12.0), libgomp1 (>= 4.2.1), libice6 (>= 1:1.0.0), libjpeg8 (>= 8c), liblapack3 | liblapack.so.3, liblzma5 (>= 5.1.1alpha+20120614), libpango-1.0-0 (>= 1.14.0), libpangocairo-1.0-0 (>= 1.14.0), libpcre3 (>= 8.10), libpng12-0 (>= 1.2.13-4), libreadline6 (>= 6.0), libsm6, libtiff5 (>= 4.0.3), libx11-6, libxext6, libxss1, libxt6, tcl8.5 (>= 8.5.0), tk8.5 (>= 8.5.0), zlib1g (>= 1:1.1.4), ucf (>= 3.0)
 Recommends: r-recommended, r-base-dev, r-doc-html
 Suggests: ess, r-doc-info | r-doc-pdf, r-mathlib, r-base-html
 Conflicts: r-base-latex, r-cran-rcompgen, r-gnome
 Replaces: r-base (<= 1.4.1-1), r-base-latex (<= 2.9.2-4), r-cran-rcompgen (<= 0.1-17-1), r-gnome (<= 2.3.1), r-recommended (<< 1.9.0)
 Provides: r-base-latex, r-cran-rcompgen, r-gnome
 Section: gnu-r
 Priority: optional
 Homepage: http://www.r-project.org/
 Description: GNU R core of statistical computation and graphics system
  R is a system for statistical computation and graphics.  It consists
  of a language plus a run-time environment with graphics, a debugger,
  access to certain system functions, and the ability to run programs
  stored in script files.
  .
  The design of R has been heavily influenced by two existing languages:
  Becker, Chambers & Wilks' S and Sussman's Scheme.  Whereas the
  resulting language is very similar in appearance to S, the underlying
  implementation and semantics are derived from Scheme.
  .
  The core of R is an interpreted computer language which allows
  branching and looping as well as modular programming using functions.
  Most of the user-visible functions in R are written in R.  It is
  possible for the user to interface to procedures written in the
  C, C++, or FORTRAN languages for efficiency, and many of R's core
  functions do so.  The R distribution contains functionality for a
  large number of statistical procedures and underlying applied math
  computations.  There is also a large set of functions which provide
  a flexible graphical environment for creating various kinds of data
  presentations.
  .
  Additionally, several thousand extension "packages" are available
  from CRAN, the Comprehensive R Archive Network, many also as Debian
  packages, named 'r-cran-<name>'.
  .
  This package provides the core GNU R system from which only the optional
  documentation packages r-base-html, r-doc-html, r-doc-pdf and r-doc-info
  have been split off to somewhat reduce the size of this package.

drwxr-xr-x root/root         0 2013-10-08 01:11 ./
drwxr-xr-x root/root         0 2013-10-08 00:55 ./etc/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./etc/R/
-rw-r--r-- root/root       792 2013-10-08 01:10 ./etc/R/Rprofile.site
-rw-r--r-- root/root       608 2013-10-08 01:10 ./etc/R/Renviron.site
-rw-r--r-- root/root      5171 2013-10-08 00:55 ./etc/R/Makeconf
-rw-r--r-- root/root      1159 2013-10-08 00:55 ./etc/R/repositories
-rw-r--r-- root/root       584 2013-10-08 00:55 ./etc/R/ldpaths
drwxr-xr-x root/root         0 2013-10-08 00:55 ./etc/ld.so.conf.d/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./etc/bash_completion.d/
-rw-r--r-- root/root     13354 2013-10-08 01:10 ./etc/bash_completion.d/R
drwxr-xr-x root/root         0 2013-10-08 00:55 ./usr/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/bin/
-rwxr-xr-x root/root      8595 2013-10-08 00:55 ./usr/bin/R
-rwxr-xr-x root/root      7896 2013-10-08 01:10 ./usr/bin/Rscript
drwxr-xr-x root/root         0 2013-10-08 01:11 ./usr/lib/
drwxr-xr-x root/root         0 2013-10-08 01:11 ./usr/lib/R/
drwxr-xr-x root/root         0 2013-10-08 00:55 ./usr/lib/R/site-library/
drwxr-xr-x root/root         0 2013-10-08 01:11 ./usr/lib/R/etc/
-rw-r--r-- root/root       165 2013-10-08 00:55 ./usr/lib/R/etc/javaconf
-rw-r--r-- root/root      1570 2013-10-08 00:55 ./usr/lib/R/etc/Renviron.orig
-rw-r--r-- root/root      1873 2013-10-08 01:10 ./usr/lib/R/etc/Renviron.ucf
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/R/bin/
-rwxr-xr-x root/root      1828 2013-10-08 00:55 ./usr/lib/R/bin/BATCH
-rwxr-xr-x root/root      2156 2013-10-08 00:55 ./usr/lib/R/bin/COMPILE
-rwxr-xr-x root/root       823 2013-10-08 00:55 ./usr/lib/R/bin/INSTALL
-rwxr-xr-x root/root      1433 2013-10-08 00:55 ./usr/lib/R/bin/LINK
-rwxr-xr-x root/root       158 2013-10-08 00:55 ./usr/lib/R/bin/REMOVE
-rwxr-xr-x root/root       312 2013-10-08 00:55 ./usr/lib/R/bin/Rd2pdf
-rwxr-xr-x root/root       359 2013-10-08 00:55 ./usr/lib/R/bin/Rdconv
-rwxr-xr-x root/root       258 2013-10-08 00:55 ./usr/lib/R/bin/Rdiff
-rwxr-xr-x root/root       310 2013-10-08 00:55 ./usr/lib/R/bin/Rprof
-rwxr-xr-x root/root       155 2013-10-08 00:55 ./usr/lib/R/bin/SHLIB
-rwxr-xr-x root/root       318 2013-10-08 00:55 ./usr/lib/R/bin/Stangle
-rwxr-xr-x root/root       316 2013-10-08 00:55 ./usr/lib/R/bin/Sweave
-rwxr-xr-x root/root       317 2013-10-08 00:55 ./usr/lib/R/bin/build
-rwxr-xr-x root/root       317 2013-10-08 00:55 ./usr/lib/R/bin/check
-rwxr-xr-x root/root      8900 2013-10-08 00:55 ./usr/lib/R/bin/config
-rwxr-xr-x root/root      1375 2013-10-08 00:55 ./usr/lib/R/bin/Rcmd
-rwxr-xr-x root/root      3602 2013-10-08 00:55 ./usr/lib/R/bin/f77_f2c
-rwxr-xr-x root/root     14564 2013-10-08 00:55 ./usr/lib/R/bin/javareconf
-rwxr-xr-x root/root      3496 2013-10-08 00:55 ./usr/lib/R/bin/mkinstalldirs
-rwxr-xr-x root/root       415 2013-10-08 00:55 ./usr/lib/R/bin/pager
-rwxr-xr-x root/root      4121 2013-10-08 00:55 ./usr/lib/R/bin/rtags
-rwxr-xr-x root/root    274278 2013-10-08 00:55 ./usr/lib/R/bin/libtool
-rwxr-xr-x root/root      8595 2013-10-08 00:55 ./usr/lib/R/bin/R
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/R/bin/exec/
-rwxr-xr-x root/root      4396 2013-10-08 01:10 ./usr/lib/R/bin/exec/R
-rwxr-xr-x root/root      7896 2013-10-08 01:10 ./usr/lib/R/bin/Rscript
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/R/lib/
-rw-r--r-- root/root   1998360 2013-10-08 01:10 ./usr/lib/R/lib/libR.so
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/R/modules/
-rw-r--r-- root/root     55336 2013-10-08 01:10 ./usr/lib/R/modules/internet.so
-rw-r--r-- root/root     31532 2013-10-08 01:10 ./usr/lib/R/modules/lapack.so
-rw-r--r-- root/root    384976 2013-10-08 01:10 ./usr/lib/R/modules/vfonts.so
-rw-r--r-- root/root    106580 2013-10-08 01:10 ./usr/lib/R/modules/R_X11.so
-rw-r--r-- root/root     47548 2013-10-08 01:10 ./usr/lib/R/modules/R_de.so
drwxr-xr-x root/root         0 2013-10-08 00:56 ./usr/lib/R/library/
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r-mathlib_3.0.2-1_armhf.deb
───────────────────────────

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 size 852640 bytes: control archive=1825 bytes.
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     135 bytes,     7 lines   *  postinst             #!/bin/sh
     132 bytes,     7 lines   *  postrm               #!/bin/sh
      30 bytes,     1 lines      shlibs               
 Package: r-mathlib
 Source: r-base
 Version: 3.0.2-1
 Architecture: armhf
 Maintainer: Dirk Eddelbuettel <edd@debian.org>
 Installed-Size: 1119
 Depends: libc6 (>= 2.4), libgomp1 (>= 4.2.1)
 Recommends: r-base-core (= 3.0.2-1), r-base-dev (= 3.0.2-1)
 Section: gnu-r
 Priority: optional
 Homepage: http://www.r-project.org/
 Description: GNU R standalone mathematics library
  R is a system for statistical computation and graphics.  It consists
  of a language plus a run-time environment with graphics, a debugger,
  access to certain system functions, and the ability to run programs
  stored in script files.
  .
  The design of R has been heavily influenced by two existing languages:
  Becker, Chambers & Wilks' S and Sussman's Scheme.  Whereas the
  resulting language is very similar in appearance to S, the underlying
  implementation and semantics are derived from Scheme.
  .
  The core of R is an interpreted computer language which allows
  branching and looping as well as modular programming using functions.
  Most of the user-visible functions in R are written in R.  It is
  possible for the user to interface to procedures written in the
  C, C++, or FORTRAN languages for efficiency, and many of R's core
  functions do so.  The R distribution contains functionality for a
  large number of statistical procedures and underlying applied math
  computations.  There is also a large set of functions which provide
  a flexible graphical environment for creating various kinds of data
  presentations.
  .
  Additionally, several thousand extension "packages" are available from
  CRAN, the Comprehensive R Archive Network, many also as Debian packages,
  named 'r-cran-<name>'.
  .
  This package provides the libRmath shared and static libraries which can
  be called from standalone C or C++ code.

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-rw-r--r-- root/root     20761 2013-10-08 00:09 ./usr/share/doc/r-mathlib/copyright
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drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/include/
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lrwxrwxrwx root/root         0 2013-10-08 01:11 ./usr/share/doc/r-mathlib/NEWS.gz -> changelog.gz
lrwxrwxrwx root/root         0 2013-10-08 01:11 ./usr/lib/libRmath.so -> libRmath.so.1
lrwxrwxrwx root/root         0 2013-10-08 01:11 ./usr/lib/libRmath.so.1 -> libRmath.so.1.0.0


r-base-core-dbg_3.0.2-1_armhf.deb
─────────────────────────────────

 new debian package, version 2.0.
 size 3769058 bytes: control archive=1888 bytes.
    1764 bytes,    38 lines      control              
    1937 bytes,    24 lines      md5sums              
 Package: r-base-core-dbg
 Source: r-base
 Version: 3.0.2-1
 Architecture: armhf
 Maintainer: Dirk Eddelbuettel <edd@debian.org>
 Installed-Size: 9732
 Depends: r-base-core (= 3.0.2-1), r-base-dev (= 3.0.2-1)
 Section: debug
 Priority: extra
 Homepage: http://www.r-project.org/
 Description: GNU R debug symbols for statistical comp. language and environment
  R is a system for statistical computation and graphics.  It consists
  of a language plus a run-time environment with graphics, a debugger,
  access to certain system functions, and the ability to run programs
  stored in script files.
  .
  The design of R has been heavily influenced by two existing languages:
  Becker, Chambers & Wilks' S and Sussman's Scheme.  Whereas the
  resulting language is very similar in appearance to S, the underlying
  implementation and semantics are derived from Scheme.
  .
  The core of R is an interpreted computer language which allows
  branching and looping as well as modular programming using functions.
  Most of the user-visible functions in R are written in R.  It is
  possible for the user to interface to procedures written in the
  C, C++, or FORTRAN languages for efficiency, and many of R's core
  functions do so.  The R distribution contains functionality for a
  large number of statistical procedures and underlying applied math
  computations.  There is also a large set of functions which provide
  a flexible graphical environment for creating various kinds of data
  presentations.
  .
  Additionally, several thousand extension "packages" are available from
  CRAN, the Comprehensive R Archive Network, many also as Debian packages,
  named 'r-cran-<name>'.
  .
  This package contains debugging symbol tables for the binaries and dynamic
  libraries in the r-base-core package.

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-rw-r--r-- root/root    153328 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/modules/internet.so
-rw-r--r-- root/root     68784 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/modules/lapack.so
-rw-r--r-- root/root     54688 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/modules/vfonts.so
-rw-r--r-- root/root    256870 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/modules/R_X11.so
-rw-r--r-- root/root    118883 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/modules/R_de.so
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/tools/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/tools/libs/
-rw-r--r-- root/root    179784 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/tools/libs/tools.so
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/utils/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/utils/libs/
-rw-r--r-- root/root     93597 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/utils/libs/utils.so
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/grDevices/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/grDevices/libs/
-rw-r--r-- root/root    442542 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/grDevices/libs/grDevices.so
-rw-r--r-- root/root     84278 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/grDevices/libs/cairo.so
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/graphics/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/graphics/libs/
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drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/stats/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/stats/libs/
-rw-r--r-- root/root   1318141 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/stats/libs/stats.so
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/methods/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/methods/libs/
-rw-r--r-- root/root     68484 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/methods/libs/methods.so
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/grid/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/grid/libs/
-rw-r--r-- root/root    423923 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/grid/libs/grid.so
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/splines/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/splines/libs/
-rw-r--r-- root/root     15587 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/splines/libs/splines.so
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/tcltk/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/tcltk/libs/
-rw-r--r-- root/root     47915 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/tcltk/libs/tcltk.so
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/parallel/
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/parallel/libs/
-rw-r--r-- root/root     34609 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/library/parallel/libs/parallel.so
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/bin/
-rw-r--r-- root/root     12660 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/bin/Rscript
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/bin/exec/
-rw-r--r-- root/root      7949 2013-10-08 01:10 ./usr/lib/debug/usr/lib/R/bin/exec/R
-rw-r--r-- root/root    615332 2013-10-08 01:10 ./usr/lib/debug/usr/lib/libRmath.so.1.0.0
drwxr-xr-x root/root         0 2013-10-08 01:10 ./usr/lib/debug/usr/bin/
-rw-r--r-- root/root     12660 2013-10-08 01:10 ./usr/lib/debug/usr/bin/Rscript
lrwxrwxrwx root/root         0 2013-10-08 01:11 ./usr/share/doc/r-base-core-dbg/NEWS.gz -> changelog.gz


┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build                                                                   │
└──────────────────────────────────────────────────────────────────────────────┘


┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use

┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Build Architecture: armhf
Build-Space: 268772
Build-Time: 3737
Distribution: jessie-staging
Host Architecture: armhf
Install-Time: 2981
Job: r-base_3.0.2-1
Machine Architecture: armhf
Package: r-base
Package-Time: 6958
Source-Version: 3.0.2-1
Space: 268772
Status: successful
Version: 3.0.2-1
────────────────────────────────────────────────────────────────────────────────
Finished at 20131008-0112
Build needed 01:55:58, 268772k disc space

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