python-pbh5tools →
0.8.0+dfsg-1 →
armhf → 2015-10-12 10:35:25
sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on testbuildd.raspbian.org
╔══════════════════════════════════════════════════════════════════════════════╗
║ python-pbh5tools 0.8.0+dfsg-1 (armhf) 12 Oct 2015 10:20 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: python-pbh5tools
Version: 0.8.0+dfsg-1
Source Version: 0.8.0+dfsg-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/python-pbh5tools-fO7eld/python-pbh5tools-0.8.0+dfsg' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/python-pbh5tools-fO7eld' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-75b67801-4216-464a-ad93-c194ad2ff778' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
Get:1 http://172.17.0.1 stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1 stretch-staging/main Sources [8354 kB]
Get:3 http://172.17.0.1 stretch-staging/main armhf Packages [10.2 MB]
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NOTICE: 'python-pbh5tools' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debian-med/python-pbh5tools.git
Need to get 8557 kB of source archives.
Get:1 http://172.17.0.1/private/ stretch-staging/main python-pbh5tools 0.8.0+dfsg-1 (dsc) [2230 B]
Get:2 http://172.17.0.1/private/ stretch-staging/main python-pbh5tools 0.8.0+dfsg-1 (tar) [8550 kB]
Get:3 http://172.17.0.1/private/ stretch-staging/main python-pbh5tools 0.8.0+dfsg-1 (diff) [4756 B]
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Merged Build-Depends: build-essential, fakeroot
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dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/«BUILDDIR»/resolver-rGCAJw/apt_archive/sbuild-build-depends-core-dummy.deb'.
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│ Install core build dependencies (apt-based resolver) │
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The following NEW packages will be installed:
sbuild-build-depends-core-dummy
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Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), dh-python, python, python-setuptools, python-pbcore, python-sphinx, python-nose, pandoc
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), dh-python, python, python-setuptools, python-pbcore, python-sphinx, python-nose, pandoc
dpkg-deb: building package 'sbuild-build-depends-python-pbh5tools-dummy' in '/«BUILDDIR»/resolver-oa5C2V/apt_archive/sbuild-build-depends-python-pbh5tools-dummy.deb'.
OK
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install python-pbh5tools build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
bsdmainutils cpp-5 debhelper dh-python dh-strip-nondeterminism
docutils-common file fonts-font-awesome fonts-lato g++-5 gcc-5 gcc-5-base
gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan2
libatomic1 libblas-common libblas3 libcc1-0 libcroco3 libexpat1 libffi6
libfile-stripnondeterminism-perl libgcc-5-dev libgcc1 libgfortran3
libglib2.0-0 libgomp1 libhdf5-10 libhts1 libicu55 libjs-jquery
libjs-modernizr libjs-sphinxdoc libjs-underscore liblapack3 liblua5.1-0
libmagic1 libmpdec2 libpipeline1 libpython-stdlib libpython2.7-minimal
libpython2.7-stdlib libpython3-stdlib libpython3.4-minimal
libpython3.4-stdlib libsqlite3-0 libssl1.0.0 libstdc++-5-dev libstdc++6
libtimedate-perl libubsan0 libunistring0 libxml2 libyaml-0-2 man-db
mime-support pandoc pandoc-data po-debconf python python-alabaster
python-babel python-babel-localedata python-docutils python-h5py
python-jinja2 python-markupsafe python-minimal python-nose python-numpy
python-pbcore python-pkg-resources python-pygments python-pysam python-roman
python-setuptools python-six python-sphinx python-sphinx-rtd-theme python-tz
python2.7 python2.7-minimal python3 python3-minimal python3.4
python3.4-minimal sgml-base sphinx-common sphinx-rtd-theme-common xml-core
Suggested packages:
wamerican wordlist whois vacation gcc-5-locales dh-make gcc-5-doc
libstdc++6-5-dbg libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg
libasan2-dbg liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg
libmpx0-dbg libquadmath-dbg gettext-doc autopoint libasprintf-dev
libgettextpo-dev groff libstdc++-5-doc less www-browser
texlive-latex-recommended texlive-xetex texlive-luatex pandoc-citeproc
etoolbox libmail-box-perl python-doc python-tk texlive-latex-base
texlive-lang-french fonts-linuxlibertine ttf-linux-libertine
python-jinja2-doc python-coverage python-nose-doc gfortran python-dev
python-numpy-dbg python-numpy-doc python-pbcore-doc ttf-bitstream-vera
python-setuptools-doc libjs-mathjax dvipng texlive-latex-extra
texlive-fonts-recommended python2.7-doc binfmt-support python3-doc
python3-tk python3-venv python3.4-venv python3.4-doc sgml-base-doc
Recommended packages:
curl wget lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs
javascript-common libmail-sendmail-perl python-pil libpaper-utils
docutils-doc python-chardet sphinx-doc
The following NEW packages will be installed:
bsdmainutils debhelper dh-python dh-strip-nondeterminism docutils-common
file fonts-font-awesome fonts-lato gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libblas-common libblas3 libcroco3
libexpat1 libffi6 libfile-stripnondeterminism-perl libgfortran3 libglib2.0-0
libhdf5-10 libhts1 libicu55 libjs-jquery libjs-modernizr libjs-sphinxdoc
libjs-underscore liblapack3 liblua5.1-0 libmagic1 libmpdec2 libpipeline1
libpython-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
libpython3.4-minimal libpython3.4-stdlib libsqlite3-0 libssl1.0.0
libtimedate-perl libunistring0 libxml2 libyaml-0-2 man-db mime-support
pandoc pandoc-data po-debconf python python-alabaster python-babel
python-babel-localedata python-docutils python-h5py python-jinja2
python-markupsafe python-minimal python-nose python-numpy python-pbcore
python-pkg-resources python-pygments python-pysam python-roman
python-setuptools python-six python-sphinx python-sphinx-rtd-theme python-tz
python2.7 python2.7-minimal python3 python3-minimal python3.4
python3.4-minimal sbuild-build-depends-python-pbh5tools-dummy sgml-base
sphinx-common sphinx-rtd-theme-common xml-core
The following packages will be upgraded:
cpp-5 g++-5 gcc-5 gcc-5-base libasan2 libatomic1 libcc1-0 libgcc-5-dev
libgcc1 libgomp1 libstdc++-5-dev libstdc++6 libubsan0
13 upgraded, 82 newly installed, 0 to remove and 33 not upgraded.
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Get:7 http://172.17.0.1/private/ stretch-staging/main g++-5 armhf 5.2.1-17+rpi1 [32.2 MB]
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Get:45 http://172.17.0.1/private/ stretch-staging/main dh-python all 2.20150826 [71.5 kB]
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Get:53 http://172.17.0.1/private/ stretch-staging/main po-debconf all 1.0.18 [248 kB]
Get:54 http://172.17.0.1/private/ stretch-staging/main libarchive-zip-perl all 1.53-1 [97.3 kB]
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Get:60 http://172.17.0.1/private/ stretch-staging/main docutils-common all 0.12+dfsg-1 [185 kB]
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Get:62 http://172.17.0.1/private/ stretch-staging/main libblas-common armhf 1.2.20110419-10 [8494 B]
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Setting up liblua5.1-0:armhf (5.1.5-8) ...
Setting up pandoc-data (1.13.2.1~dfsg-1) ...
Setting up pandoc (1.13.2.1~dfsg-1+b2) ...
Setting up python-babel-localedata (1.3+dfsg.1-6) ...
Setting up python-pkg-resources (18.3.1-2) ...
Setting up python-six (1.9.0-5) ...
Setting up python-tz (2012c+dfsg-0.1) ...
Setting up python-babel (1.3+dfsg.1-6) ...
update-alternatives: using /usr/bin/pybabel-python2 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python-roman (2.0.0-1) ...
Setting up python-numpy (1:1.9.2-5) ...
Setting up python-h5py (2.5.0-1+b1) ...
Setting up python-markupsafe (0.23-2) ...
Setting up python-jinja2 (2.8-1) ...
Setting up python-nose (1.3.6-1) ...
Setting up python-pysam (0.8.3+ds1-3) ...
Setting up python-pbcore (1.2.3+dfsg-1) ...
Setting up python-pygments (2.0.1+dfsg-1.1) ...
Setting up python-setuptools (18.3.1-2) ...
Setting up libjs-modernizr (2.6.2+ds1-1) ...
Setting up sphinx-rtd-theme-common (0.1.9-1) ...
Setting up python-sphinx-rtd-theme (0.1.9-1) ...
Setting up sphinx-common (1.3.1-6) ...
Processing triggers for sgml-base (1.26+nmu4) ...
Setting up docutils-common (0.12+dfsg-1) ...
Processing triggers for sgml-base (1.26+nmu4) ...
Setting up python-docutils (0.12+dfsg-1) ...
update-alternatives: using /usr/share/docutils/scripts/python2/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python-alabaster (0.7.6-1) ...
Setting up python-sphinx (1.3.1-6) ...
Setting up dh-python (2.20150826) ...
Setting up python3 (3.4.3-6) ...
Setting up dh-strip-nondeterminism (0.012-1) ...
Setting up debhelper (9.20151005) ...
Setting up sbuild-build-depends-python-pbh5tools-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.19-19) ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.25.1-1 dpkg-dev_1.18.2 g++-5_5.2.1-17+rpi1 gcc-5_5.2.1-17+rpi1 libc6-dev_2.19-19 libstdc++-5-dev_5.2.1-17+rpi1 libstdc++6_5.2.1-17+rpi1 linux-libc-dev_3.16.7-ckt4-1+rpi1+b2
Package versions: adduser_3.113+nmu3 apt_1.0.10.2 base-files_9.4+rpi1 base-passwd_3.5.38 bash_4.3-14 binutils_2.25.1-1 bsdmainutils_9.0.6 bsdutils_1:2.26.2-9 build-essential_11.7 bzip2_1.0.6-8 coreutils_8.23-4 cpio_2.11+dfsg-4.1 cpp_4:5.2.1-4+rpi2 cpp-5_5.2.1-17+rpi1 dash_0.5.7-4 debconf_1.5.57 debconf-i18n_1.5.57 debfoster_2.7-2 debhelper_9.20151005 debianutils_4.5.1 dh-python_2.20150826 dh-strip-nondeterminism_0.012-1 diffutils_1:3.3-1 dmsetup_2:1.02.104-1 docutils-common_0.12+dfsg-1 dpkg_1.18.2 dpkg-dev_1.18.2 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.4.2-9 fonts-font-awesome_4.4.0~dfsg-1 fonts-lato_2.0-1 g++_4:5.2.1-4+rpi2 g++-5_5.2.1-17+rpi1 gcc_4:5.2.1-4+rpi2 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.4-4 gcc-4.9-base_4.9.3-4 gcc-5_5.2.1-17+rpi1 gcc-5-base_5.2.1-17+rpi1 gettext_0.19.6-1 gettext-base_0.19.6-1 gnupg_1.4.19-5 gpgv_1.4.19-5 grep_2.21-2 groff-base_1.22.3-1 gzip_1.6-4 hostname_3.16 init_1.23 init-system-helpers_1.23 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-2+rpi1 kmod_21-1 libacl1_2.2.52-2 libapparmor1_2.9.2-3 libapt-pkg4.16_1.0.10.2 libarchive-zip-perl_1.53-1 libasan2_5.2.1-17+rpi1 libatomic1_5.2.1-17+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.4-1 libaudit1_1:2.4.4-1 libblas-common_1.2.20110419-10 libblas3_1.2.20110419-10 libblkid1_2.26.2-9 libbz2-1.0_1.0.6-8 libc-bin_2.19-19 libc-dev-bin_2.19-19 libc6_2.19-19 libc6-dev_2.19-19 libcap2_1:2.24-11 libcap2-bin_1:2.24-11 libcc1-0_5.2.1-17+rpi1 libcomerr2_1.42.13-1 libcroco3_0.6.8-3 libcryptsetup4_2:1.6.6-5 libdb5.3_5.3.28-11 libdbus-1-3_1.8.20-1 libdebconfclient0_0.195 libdevmapper1.02.1_2:1.02.104-1 libdpkg-perl_1.18.2 libdrm2_2.4.64-1 libexpat1_2.1.0-7 libfakeroot_1.20.2-1 libfdisk1_2.26.2-9 libffi6_3.2.1-3 libfile-stripnondeterminism-perl_0.012-1 libgc1c2_1:7.2d-6.4 libgcc-5-dev_5.2.1-17+rpi1 libgcc1_1:5.2.1-17+rpi1 libgcrypt20_1.6.3-2 libgdbm3_1.8.3-13.1 libgfortran3_5.2.1-17+rpi1 libglib2.0-0_2.46.0-2 libgmp10_2:6.0.0+dfsg-7+rpi1 libgomp1_5.2.1-17+rpi1 libgpg-error0_1.19-2 libhdf5-10_1.8.15-patch1+docs-4 libhts1_1.2.1-1+rpi1 libicu55_55.1-5 libisl13_0.14-2 libjs-jquery_1.11.3+dfsg-4 libjs-modernizr_2.6.2+ds1-1 libjs-sphinxdoc_1.3.1-6 libjs-underscore_1.7.0~dfsg-1 libklibc_2.0.4-2+rpi1 libkmod2_21-1 liblapack3_3.5.0-4 liblocale-gettext-perl_1.05-9 liblua5.1-0_5.1.5-8 liblzma5_5.1.1alpha+20120614-2.1 libmagic1_1:5.25-2 libmount1_2.26.2-9 libmpc3_1.0.3-1 libmpdec2_2.4.1-1 libmpfr4_3.1.3-1 libncurses5_6.0+20150810-1 libncursesw5_6.0+20150810-1 libnih-dbus1_1.0.3-4.3 libnih1_1.0.3-4.3 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpcre3_2:8.35-7.1 libpipeline1_1.4.1-1 libpng12-0_1.2.50-2+b2 libprocps4_2:3.3.10-2 libpython-stdlib_2.7.9-1 libpython2.7-minimal_2.7.10-4 libpython2.7-stdlib_2.7.10-4 libpython3-stdlib_3.4.3-6 libpython3.4-minimal_3.4.3-9 libpython3.4-stdlib_3.4.3-9 libreadline6_6.3-8+b3 libseccomp2_2.2.3-2 libselinux1_2.3-2 libsemanage-common_2.3-1 libsemanage1_2.3-1 libsepol1_2.3-2 libsmartcols1_2.26.2-9 libsqlite3-0_3.8.11.1-1 libss2_1.42.13-1 libssl1.0.0_1.0.2d-1 libstdc++-5-dev_5.2.1-17+rpi1 libstdc++6_5.2.1-17+rpi1 libsystemd0_225-1 libtext-charwidth-perl_0.04-7+b4 libtext-iconv-perl_1.7-5+b5 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20150810-1 libubsan0_5.2.1-17+rpi1 libudev1_225-1 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-27 libustr-1.0-1_1.0.4-5 libuuid1_2.26.2-9 libxml2_2.9.2+zdfsg1-4 libyaml-0-2_0.1.6-3 linux-libc-dev_3.16.7-ckt4-1+rpi1+b2 login_1:4.2-3 lsb-base_4.1+Debian13+rpi1+nmu1 make_4.0-8.2 makedev_2.3.1-93 man-db_2.7.3-1 mawk_1.3.3-17 mime-support_3.59 mount_2.26.2-9 mountall_2.54 multiarch-support_2.19-19 nano_2.4.2-1 ncurses-base_6.0+20150810-1 ncurses-bin_6.0+20150810-1 pandoc_1.13.2.1~dfsg-1+b2 pandoc-data_1.13.2.1~dfsg-1 passwd_1:4.2-3 patch_2.7.5-1 perl_5.20.2-6 perl-base_5.20.2-6 perl-modules_5.20.2-6 plymouth_0.9.0-9 po-debconf_1.0.18 procps_2:3.3.10-2 python_2.7.9-1 python-alabaster_0.7.6-1 python-babel_1.3+dfsg.1-6 python-babel-localedata_1.3+dfsg.1-6 python-docutils_0.12+dfsg-1 python-h5py_2.5.0-1+b1 python-jinja2_2.8-1 python-markupsafe_0.23-2 python-minimal_2.7.9-1 python-nose_1.3.6-1 python-numpy_1:1.9.2-5 python-pbcore_1.2.3+dfsg-1 python-pkg-resources_18.3.1-2 python-pygments_2.0.1+dfsg-1.1 python-pysam_0.8.3+ds1-3 python-roman_2.0.0-1 python-setuptools_18.3.1-2 python-six_1.9.0-5 python-sphinx_1.3.1-6 python-sphinx-rtd-theme_0.1.9-1 python-tz_2012c+dfsg-0.1 python2.7_2.7.10-4 python2.7-minimal_2.7.10-4 python3_3.4.3-6 python3-minimal_3.4.3-6 python3.4_3.4.3-9 python3.4-minimal_3.4.3-9 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-pbh5tools-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 sgml-base_1.26+nmu4 sphinx-common_1.3.1-6 sphinx-rtd-theme-common_0.1.9-1 startpar_0.59-3 systemd_225-1 systemd-sysv_225-1 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 tar_1.28-1 tzdata_2015f-1 udev_225-1 util-linux_2.26.2-9 xml-core_0.13+nmu2 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Sun Aug 16 00:32:00 2015 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./python-pbh5tools_0.8.0+dfsg-1.dsc
dpkg-source: info: extracting python-pbh5tools in python-pbh5tools-0.8.0+dfsg
dpkg-source: info: unpacking python-pbh5tools_0.8.0+dfsg.orig.tar.gz
dpkg-source: info: unpacking python-pbh5tools_0.8.0+dfsg-1.debian.tar.xz
dpkg-source: info: applying default-doc-theme
dpkg-source: info: applying enable-nosetests
Check disc space
────────────────
Sufficient free space for build
User Environment
────────────────
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-75b67801-4216-464a-ad93-c194ad2ff778
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package python-pbh5tools
dpkg-buildpackage: source version 0.8.0+dfsg-1
dpkg-buildpackage: source distribution unstable
dpkg-source --before-build python-pbh5tools-0.8.0+dfsg
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
LC_ALL=C.UTF-8 dh clean --with python2 --buildsystem=pybuild
dh_testdir -O--buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg'
dh_auto_clean
I: pybuild base:170: python2.7 setup.py clean
running clean
removing '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build' (and everything under it)
'build/bdist.linux-armv7l' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
/usr/bin/make clean
make[2]: Entering directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg'
cd doc && rm -rf modules.rst pbtools.* bash5lib.* cmph5tools.* \
bash5tools.* _templates _static _build searchindex.js objects.inv
rm -rf build/;\
find . -name "*.egg-info" | xargs rm -rf;\
find . -name "*.pyc" | xargs rm -rf;\
rm -rf dist/
rm -f nosetests.xml
make[2]: Leaving directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg'
make[1]: Leaving directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg'
dh_clean -O--buildsystem=pybuild
debian/rules build-arch
LC_ALL=C.UTF-8 dh build-arch --with python2 --buildsystem=pybuild
dh_testdir -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:170: python2.7 setup.py config
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg'
dh_auto_build
I: pybuild base:170: /usr/bin/python setup.py build
running build
running build_py
creating /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/CmpH5Compare.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/CmpH5Format.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/CmpH5Merge.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/CmpH5Select.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/CmpH5Sort.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/CmpH5Stats.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/CmpH5Utils.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/Indexer.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/Metrics.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/PBH5ToolsException.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/__init__.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/_version.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/cbook.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
copying ./pbh5tools/mlab.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools
running build_ext
building 'pbh5tools/ci' extension
creating build
creating build/temp.linux-armv7l-2.7
creating build/temp.linux-armv7l-2.7/pbh5tools
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c pbh5tools/ci.c -o build/temp.linux-armv7l-2.7/pbh5tools/ci.o -O3 -shared
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-2.7/pbh5tools/ci.o -o /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/ci.so
running build_scripts
creating build/scripts-2.7
copying and adjusting bin/bash5tools.py -> build/scripts-2.7
copying and adjusting bin/cmph5tools.py -> build/scripts-2.7
changing mode of build/scripts-2.7/bash5tools.py from 664 to 775
changing mode of build/scripts-2.7/cmph5tools.py from 664 to 775
/usr/bin/make -C doc html
make[2]: Entering directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/doc'
sphinx-build -b html -d _build/doctrees . _build/html
Running Sphinx v1.3.1
making output directory...
loading pickled environment... not yet created
loading intersphinx inventory from http://docs.python.org/objects.inv...
WARNING: intersphinx inventory 'http://docs.python.org/objects.inv' not fetchable due to <class 'urllib2.URLError'>: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed (_ssl.c:590)>
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 2 source files that are out of date
updating environment: 2 added, 0 changed, 0 removed
reading sources... [ 50%] cmph5tools-examples
reading sources... [100%] index
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
writing output... [ 50%] cmph5tools-examples
writing output... [100%] index
generating indices... genindex
writing additional pages... search
WARNING: html_static_path entry u'/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/doc/_static' does not exist
copying static files... done
copying extra files... done
dumping search index in English (code: en) ... done
dumping object inventory... done
build succeeded, 2 warnings.
Build finished. The HTML pages are in _build/html.
make[2]: Leaving directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/doc'
make[1]: Leaving directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg'
debian/rules override_dh_auto_test
make[1]: Entering directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg'
PYBUILD_SYSTEM=custom \
PYBUILD_TEST_ARGS="{interpreter} setup.py test" \
dh_auto_test
I: pybuild base:170: python2.7 setup.py test
running test
running egg_info
creating pbh5tools.egg-info
writing requirements to pbh5tools.egg-info/requires.txt
writing pbh5tools.egg-info/PKG-INFO
writing top-level names to pbh5tools.egg-info/top_level.txt
writing dependency_links to pbh5tools.egg-info/dependency_links.txt
writing manifest file 'pbh5tools.egg-info/SOURCES.txt'
reading manifest file 'pbh5tools.egg-info/SOURCES.txt'
writing manifest file 'pbh5tools.egg-info/SOURCES.txt'
running build_ext
building 'pbh5tools/ci' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c pbh5tools/ci.c -o build/temp.linux-armv7l-2.7/pbh5tools/ci.o -O3 -shared
creating build/lib.linux-armv7l-2.7
creating build/lib.linux-armv7l-2.7/pbh5tools
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-2.7/pbh5tools/ci.o -o build/lib.linux-armv7l-2.7/pbh5tools/ci.so
copying build/lib.linux-armv7l-2.7/pbh5tools/ci.so -> .
test_cmph5lib_CmpH5Sort.TestCmpH5Format.test___init__ ... ok
test_cmph5lib_CmpH5Sort.TestComputeIndices.test_compute_indices ... ok
test_cmph5lib_CmpH5Sort.TestComputeIndicesDP.test_compute_indices_d_p ... ok
test_cmph5lib_CmpH5Sort.TestComputeRefIndexTable.test_compute_ref_index_table ... ok
test_cmph5lib_CmpH5Sort.TestGetOverlappingRanges.test_get_overlapping_ranges ... ok
test_cmph5lib_CmpH5Sort.TestGetReadsInRange.test_get_reads_in_range ... ok
test_cmph5lib_CmpH5Sort.TestNumberWithinRange.test_number_within_range ... ok
----------------------------------------------------------------------
Ran 7 tests in 32.451s
OK
make[1]: Leaving directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg'
fakeroot debian/rules binary-arch
LC_ALL=C.UTF-8 dh binary-arch --with python2 --buildsystem=pybuild
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:170: /usr/bin/python setup.py install --root /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools
running install
running build
running build_py
running build_ext
running build_scripts
running install_lib
creating /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr
creating /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib
creating /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7
creating /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages
creating /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/CmpH5Compare.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/CmpH5Format.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/CmpH5Merge.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/CmpH5Select.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/CmpH5Sort.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/CmpH5Stats.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/CmpH5Utils.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/Indexer.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/Metrics.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/PBH5ToolsException.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/__init__.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/_version.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/cbook.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/mlab.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
copying /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/.pybuild/pythonX.Y_2.7/build/pbh5tools/ci.so -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Compare.py to CmpH5Compare.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Format.py to CmpH5Format.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Merge.py to CmpH5Merge.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Select.py to CmpH5Select.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Sort.py to CmpH5Sort.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Stats.py to CmpH5Stats.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Utils.py to CmpH5Utils.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/Indexer.py to Indexer.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/Metrics.py to Metrics.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/PBH5ToolsException.py to PBH5ToolsException.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/__init__.py to __init__.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/_version.py to _version.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/cbook.py to cbook.pyc
byte-compiling /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/mlab.py to mlab.pyc
running install_egg_info
running egg_info
writing requirements to pbh5tools.egg-info/requires.txt
writing pbh5tools.egg-info/PKG-INFO
writing top-level names to pbh5tools.egg-info/top_level.txt
writing dependency_links to pbh5tools.egg-info/dependency_links.txt
reading manifest file 'pbh5tools.egg-info/SOURCES.txt'
writing manifest file 'pbh5tools.egg-info/SOURCES.txt'
Copying pbh5tools.egg-info to /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info
running install_scripts
creating /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/bin
copying build/scripts-2.7/bash5tools.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/bin
copying build/scripts-2.7/cmph5tools.py -> /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/bin
changing mode of /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/bin/bash5tools.py to 775
changing mode of /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/bin/cmph5tools.py to 775
debian/rules override_dh_install
make[1]: Entering directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg'
dh_install
# We do this here rather than in .install files so that debhelper
# takes care of the #!/usr/bin/env lines for us
mv /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/bin/bash5tools.py /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/bin/bash5tools
mv /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/bin/cmph5tools.py /«BUILDDIR»/python-pbh5tools-0.8.0+dfsg/debian/python-pbh5tools/usr/bin/cmph5tools
make[1]: Leaving directory '/«BUILDDIR»/python-pbh5tools-0.8.0+dfsg'
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_installman -a -O--buildsystem=pybuild
dh_python2 -a -O--buildsystem=pybuild
I: dh_python2 fs:316: renaming ci.so to ci.arm-linux-gnueabihf.so
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-pbh5tools/usr/lib/python2.7/dist-packages/pbh5tools/ci.arm-linux-gnueabihf.so was not linked against libpthread.so.0 (it uses none of the library's symbols)
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: package python-pbh5tools: unused substitution variable ${python:Provides}
dpkg-gencontrol: warning: package python-pbh5tools: unused substitution variable ${python:Versions}
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'python-pbh5tools' in '../python-pbh5tools_0.8.0+dfsg-1_armhf.deb'.
dpkg-genchanges -B -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../python-pbh5tools_0.8.0+dfsg-1_armhf.changes
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build python-pbh5tools-0.8.0+dfsg
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20151012-1033
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build Chroot │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
python-pbh5tools_0.8.0+dfsg-1_armhf.changes:
────────────────────────────────────────────
Format: 1.8
Date: Sat, 15 Aug 2015 15:22:56 -0700
Source: python-pbh5tools
Binary: python-pbh5tools python-pbh5tools-doc
Architecture: armhf
Version: 0.8.0+dfsg-1
Distribution: stretch-staging
Urgency: low
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Afif Elghraoui <afif@ghraoui.name>
Description:
python-pbh5tools - tools for manipulating HDF5 files produced by Pacific Biosciences
python-pbh5tools-doc - tools for manipulating HDF5 files produced by Pacific Biosciences
Closes: 787982
Changes:
python-pbh5tools (0.8.0+dfsg-1) unstable; urgency=low
.
* Initial release (Closes: #787982)
* Added manpages for executable scripts
* Set sphinx documentation theme to default from original PacBio theme
* Made symlinks from upstream executable name to version without .py suffix
Checksums-Sha1:
296c738e64106d8ffdc53270f446c9f303f5bb68 29644 python-pbh5tools_0.8.0+dfsg-1_armhf.deb
Checksums-Sha256:
fc5e35389ff737360ada8430e390ec889fbf8e5f3c877d0b6771a95fea028d68 29644 python-pbh5tools_0.8.0+dfsg-1_armhf.deb
Files:
487d5957add90ee4e65e0fe56a666ae8 29644 python optional python-pbh5tools_0.8.0+dfsg-1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
python-pbh5tools_0.8.0+dfsg-1_armhf.deb
───────────────────────────────────────
new debian package, version 2.0.
size 29644 bytes: control archive=1767 bytes.
793 bytes, 16 lines control
2511 bytes, 29 lines md5sums
164 bytes, 9 lines * postinst #!/bin/sh
267 bytes, 14 lines * prerm #!/bin/sh
Package: python-pbh5tools
Version: 0.8.0+dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 161
Depends: libc6 (>= 2.4), python (<< 2.8), python (>= 2.7~), python-h5py, python-numpy, python-pbcore, python:any (>= 2.7.5-5~), python-pkg-resources
Section: python
Priority: optional
Homepage: https://github.com/PacificBiosciences/pbh5tools
Description: tools for manipulating HDF5 files produced by Pacific Biosciences
This package provides functionality for manipulating and extracting data
from cmp.h5 and bas.h5 files produced by the Pacific Biosciences sequencers.
cmp.h5 files contain alignment information while bas.h5 files contain
base-call information.
.
This package is part of the SMRTAnalysis suite.
drwxr-xr-x root/root 0 2015-10-12 10:33 ./
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/bin/
-rwxr-xr-x root/root 6895 2015-10-12 10:32 ./usr/bin/bash5tools
lrwxrwxrwx root/root 0 2015-10-12 10:33 ./usr/bin/bash5tools.py -> bash5tools
-rwxr-xr-x root/root 12055 2015-10-12 10:32 ./usr/bin/cmph5tools
lrwxrwxrwx root/root 0 2015-10-12 10:33 ./usr/bin/cmph5tools.py -> cmph5tools
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/lib/
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/lib/python2.7/
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/lib/python2.7/dist-packages/
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/
-rw-r--r-- root/root 1827 2015-10-12 10:33 ./usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2015-10-12 10:33 ./usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/dependency_links.txt
-rw-r--r-- root/root 1 2015-10-12 10:32 ./usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/not-zip-safe
-rw-r--r-- root/root 45 2015-10-12 10:33 ./usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/requires.txt
-rw-r--r-- root/root 23 2015-10-12 10:33 ./usr/lib/python2.7/dist-packages/pbh5tools-0.8.0.egg-info/top_level.txt
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/lib/python2.7/dist-packages/pbh5tools/
-rw-r--r-- root/root 4088 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Compare.py
-rw-r--r-- root/root 4252 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Format.py
-rw-r--r-- root/root 14153 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Merge.py
-rw-r--r-- root/root 7366 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Select.py
-rw-r--r-- root/root 20340 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Sort.py
-rw-r--r-- root/root 3425 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Stats.py
-rw-r--r-- root/root 3379 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/CmpH5Utils.py
-rw-r--r-- root/root 3525 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/Indexer.py
-rw-r--r-- root/root 19047 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/Metrics.py
-rw-r--r-- root/root 2076 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/PBH5ToolsException.py
-rw-r--r-- root/root 0 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/__init__.py
-rw-r--r-- root/root 1852 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/_version.py
-rw-r--r-- root/root 3469 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/cbook.py
-rw-r--r-- root/root 5364 2015-10-12 10:33 ./usr/lib/python2.7/dist-packages/pbh5tools/ci.arm-linux-gnueabihf.so
-rw-r--r-- root/root 11874 2015-08-15 19:12 ./usr/lib/python2.7/dist-packages/pbh5tools/mlab.py
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/share/
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/share/doc/
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/share/doc/python-pbh5tools/
-rw-r--r-- root/root 1617 2015-08-15 19:12 ./usr/share/doc/python-pbh5tools/LICENSES.txt
-rw-r--r-- root/root 253 2015-08-15 19:12 ./usr/share/doc/python-pbh5tools/README.md
-rw-r--r-- root/root 397 2015-08-15 23:49 ./usr/share/doc/python-pbh5tools/TODO.Debian
-rw-r--r-- root/root 278 2015-08-15 23:49 ./usr/share/doc/python-pbh5tools/changelog.Debian.gz
-rw-r--r-- root/root 1977 2015-08-15 23:49 ./usr/share/doc/python-pbh5tools/copyright
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/share/man/
drwxr-xr-x root/root 0 2015-10-12 10:33 ./usr/share/man/man1/
-rw-r--r-- root/root 695 2015-10-12 10:33 ./usr/share/man/man1/bash5tools.1.gz
-rw-r--r-- root/root 655 2015-10-12 10:33 ./usr/share/man/man1/cmph5tools.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 11156
Build-Time: 111
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 646
Job: python-pbh5tools_0.8.0+dfsg-1
Machine Architecture: armhf
Package: python-pbh5tools
Package-Time: 820
Source-Version: 0.8.0+dfsg-1
Space: 11156
Status: successful
Version: 0.8.0+dfsg-1
────────────────────────────────────────────────────────────────────────────────
Finished at 20151012-1033
Build needed 00:13:40, 11156k disc space