Raspbian Package Auto-Building

python-cobra → 0.26.3-2 → armhf → 2023-09-23 10:28:37

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-04

+==============================================================================+
| python-cobra 0.26.3-2 (armhf)                Sat, 23 Sep 2023 09:12:19 +0000 |
+==============================================================================+

Package: python-cobra
Version: 0.26.3-2
Source Version: 0.26.3-2
Distribution: trixie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/trixie-staging-armhf-sbuild-4eecc36f-ca71-4609-b96a-83136038465d' with '<<CHROOT>>'

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| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.4.1/private trixie-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private trixie-staging/main Sources [14.1 MB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf Packages [14.6 MB]
Fetched 28.7 MB in 29s (989 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/trixie-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'python-cobra' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-cobra.git
Please use:
git clone https://salsa.debian.org/med-team/python-cobra.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 3762 kB of source archives.
Get:1 http://172.17.4.1/private trixie-staging/main python-cobra 0.26.3-2 (dsc) [2517 B]
Get:2 http://172.17.4.1/private trixie-staging/main python-cobra 0.26.3-2 (tar) [3751 kB]
Get:3 http://172.17.4.1/private trixie-staging/main python-cobra 0.26.3-2 (diff) [8644 B]
Fetched 3762 kB in 0s (9422 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/python-cobra-JQkpUH/python-cobra-0.26.3' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-cobra-JQkpUH' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-SKcmXv/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-SKcmXv/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-SKcmXv/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ Packages [430 B]
Fetched 2106 B in 1s (2703 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libpam-cap netbase sensible-utils sgml-base util-linux-extra
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 12 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (22.4 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 11775 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any-amd64 any-i386 arm64 armel armhf mips mips64el mipsel ppc64el alpha hppa m68k powerpc powerpcspe ppc64 sh4 sparc64 all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-python, libglpk-dev, python3-dev, python3-setuptools, python3-depinfo, python3-future, python3-importlib-resources, python3-numpy, python3-optlang (>= 1.7.0-1~), python3-ruamel.yaml, python3-pandas, python3-pip, python3-pipdeptree, python3-requests, python3-swiglpk (>= 5.0.8-1~), python3-tabulate, python3-sbml5, python3-simplejson, cython3, python3-pytest, python3-pytest-benchmark, python3-pytest-mock, python3-jsonschema, libsbml5, python3-matplotlib, python3-appdirs, python3-diskcache, python3-httpx, python3-pydantic, python3-rich
Filtered Build-Depends: debhelper-compat (= 13), dh-python, libglpk-dev, python3-dev, python3-setuptools, python3-depinfo, python3-future, python3-importlib-resources, python3-numpy, python3-optlang (>= 1.7.0-1~), python3-ruamel.yaml, python3-pandas, python3-pip, python3-pipdeptree, python3-requests, python3-swiglpk (>= 5.0.8-1~), python3-tabulate, python3-sbml5, python3-simplejson, cython3, python3-pytest, python3-pytest-benchmark, python3-pytest-mock, python3-jsonschema, libsbml5, python3-matplotlib, python3-appdirs, python3-diskcache, python3-httpx, python3-pydantic, python3-rich
dpkg-deb: building package 'sbuild-build-depends-python-cobra-dummy' in '/<<BUILDDIR>>/resolver-SKcmXv/apt_archive/sbuild-build-depends-python-cobra-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-python-cobra-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ Sources [729 B]
Get:5 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ Packages [789 B]
Fetched 2851 B in 1s (3658 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install python-cobra build dependencies (apt-based resolver)
------------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libpam-cap netbase sgml-base util-linux-extra
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev blt bsdextrautils ca-certificates
  cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file
  fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx gettext
  gettext-base groff-base intltool-debian libamd2 libarchive-zip-perl
  libblas-dev libblas3 libbrotli1 libbsd0 libbtf1 libcamd2 libccolamd2
  libcholmod3 libcolamd2 libcxsparse3 libdebhelper-perl libdeflate0 libelf1
  libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1
  libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libglpk-dev libglpk40
  libgmp-dev libgmpxx4ldbl libgraphite2-3 libharfbuzz0b libicu72
  libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui
  libjs-sphinxdoc libjs-underscore libklu1 liblapack-dev liblapack3 liblbfgsb0
  liblcms2-2 libldl2 liblerc4 libltdl7 libmagic-mgc libmagic1 libmetis5
  libmongoose2 libopenjp2-7 libpipeline1 libpng16-16 libpython3-dev
  libpython3-stdlib libpython3.11 libpython3.11-dev libpython3.11-minimal
  libpython3.11-stdlib libqhull-r8.0 libraqm0 librbio2 libsbml5 libsliplu1
  libspqr2 libsub-override-perl libsuitesparse-dev libsuitesparseconfig5
  libtcl8.6 libtiff6 libtk8.6 libtool libuchardet0 libumfpack5 libwebp7
  libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6
  libxext6 libxft2 libxml2 libxrender1 libxslt1.1 libxss1 m4 man-db
  media-types openssl po-debconf python-matplotlib-data python3 python3-anyio
  python3-appdirs python3-attr python3-brotli python3-certifi python3-chardet
  python3-charset-normalizer python3-click python3-colorama python3-contourpy
  python3-cpuinfo python3-cycler python3-dateutil python3-decorator
  python3-depinfo python3-dev python3-diskcache python3-distutils
  python3-fonttools python3-fs python3-future python3-h11 python3-httpcore
  python3-httpx python3-idna python3-importlib-resources python3-iniconfig
  python3-jsonschema python3-kiwisolver python3-lib2to3 python3-lxml
  python3-lz4 python3-markdown-it python3-matplotlib python3-mdurl
  python3-minimal python3-more-itertools python3-mpmath python3-numpy
  python3-optlang python3-packaging python3-pandas python3-pandas-lib
  python3-pil python3-pil.imagetk python3-pip python3-pipdeptree
  python3-pkg-resources python3-pluggy python3-pydantic python3-pygments
  python3-pyparsing python3-pyrsistent python3-pytest python3-pytest-benchmark
  python3-pytest-mock python3-requests python3-rfc3986 python3-rich
  python3-ruamel.yaml python3-ruamel.yaml.clib python3-sbml5 python3-scipy
  python3-setuptools python3-simplejson python3-six python3-sniffio
  python3-swiglpk python3-sympy python3-tabulate python3-tk
  python3-typing-extensions python3-tz python3-ufolib2 python3-unicodedata2
  python3-urllib3 python3-wheel python3-zipp python3.11 python3.11-dev
  python3.11-minimal swig swig4.0 tk8.6-blt2.5 unicode-data x11-common
  zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc blt-demo cython-doc dh-make flit
  python3-build python3-installer gettext-doc libasprintf-dev libgettextpo-dev
  groff liblapack-doc low-memory-monitor libiodbc2-dev
  default-libmysqlclient-dev gmp-doc libgmp10-doc libmpfr-dev
  libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 libtool-doc gfortran
  | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
  libmail-box-perl python3-doc python3-tk python3-venv python-attr-doc
  python-charset-normalizer-doc python-cycler-doc python-future-doc
  python-jsonschema-doc python-lxml-doc cm-super-minimal dvipng ffmpeg
  fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common
  python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-pyqt5
  python3-sip python3-tornado texlive-extra-utils texlive-latex-extra
  python-mpmath-doc python3-gmpy2 gfortran python-pandas-doc
  python3-statsmodels python-pil-doc python-pygments-doc ttf-bitstream-vera
  python-pyparsing-doc python-pytest-mock-doc python3-mock
  python3-cryptography python3-openssl python3-socks python-requests-doc
  python-scipy-doc python-setuptools-doc texlive-fonts-extra python-sympy-doc
  tix python3-tk-dbg python3.11-venv python3.11-doc binfmt-support swig-doc
  swig-examples swig4.0-examples swig4.0-doc
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
  xdg-user-dirs javascript-common libgraphblas-dev libltdl-dev
  libmail-sendmail-perl python3-json-pointer python3-rfc3987
  python3-uritemplate python3-webcolors python3-bs4 python3-html5lib
  python3-bottleneck python3-numexpr python3-odf python3-openpyxl
  python3-tables python3-jinja2 python3-olefile python3-graphviz
  python3-elasticsearch python3-freezegun python3-pygal isympy-common
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev blt bsdextrautils ca-certificates
  cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file
  fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx gettext
  gettext-base groff-base intltool-debian libamd2 libarchive-zip-perl
  libblas-dev libblas3 libbrotli1 libbsd0 libbtf1 libcamd2 libccolamd2
  libcholmod3 libcolamd2 libcxsparse3 libdebhelper-perl libdeflate0 libelf1
  libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1
  libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libglpk-dev libglpk40
  libgmp-dev libgmpxx4ldbl libgraphite2-3 libharfbuzz0b libicu72
  libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui
  libjs-sphinxdoc libjs-underscore libklu1 liblapack-dev liblapack3 liblbfgsb0
  liblcms2-2 libldl2 liblerc4 libltdl7 libmagic-mgc libmagic1 libmetis5
  libmongoose2 libopenjp2-7 libpipeline1 libpng16-16 libpython3-dev
  libpython3-stdlib libpython3.11 libpython3.11-dev libpython3.11-minimal
  libpython3.11-stdlib libqhull-r8.0 libraqm0 librbio2 libsbml5 libsliplu1
  libspqr2 libsub-override-perl libsuitesparse-dev libsuitesparseconfig5
  libtcl8.6 libtiff6 libtk8.6 libtool libuchardet0 libumfpack5 libwebp7
  libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6
  libxext6 libxft2 libxml2 libxrender1 libxslt1.1 libxss1 m4 man-db
  media-types openssl po-debconf python-matplotlib-data python3 python3-anyio
  python3-appdirs python3-attr python3-brotli python3-certifi python3-chardet
  python3-charset-normalizer python3-click python3-colorama python3-contourpy
  python3-cpuinfo python3-cycler python3-dateutil python3-decorator
  python3-depinfo python3-dev python3-diskcache python3-distutils
  python3-fonttools python3-fs python3-future python3-h11 python3-httpcore
  python3-httpx python3-idna python3-importlib-resources python3-iniconfig
  python3-jsonschema python3-kiwisolver python3-lib2to3 python3-lxml
  python3-lz4 python3-markdown-it python3-matplotlib python3-mdurl
  python3-minimal python3-more-itertools python3-mpmath python3-numpy
  python3-optlang python3-packaging python3-pandas python3-pandas-lib
  python3-pil python3-pil.imagetk python3-pip python3-pipdeptree
  python3-pkg-resources python3-pluggy python3-pydantic python3-pygments
  python3-pyparsing python3-pyrsistent python3-pytest python3-pytest-benchmark
  python3-pytest-mock python3-requests python3-rfc3986 python3-rich
  python3-ruamel.yaml python3-ruamel.yaml.clib python3-sbml5 python3-scipy
  python3-setuptools python3-simplejson python3-six python3-sniffio
  python3-swiglpk python3-sympy python3-tabulate python3-tk
  python3-typing-extensions python3-tz python3-ufolib2 python3-unicodedata2
  python3-urllib3 python3-wheel python3-zipp python3.11 python3.11-dev
  python3.11-minimal sbuild-build-depends-python-cobra-dummy swig swig4.0
  tk8.6-blt2.5 unicode-data x11-common zlib1g-dev
0 upgraded, 204 newly installed, 0 to remove and 12 not upgraded.
Need to get 116 MB of archives.
After this operation, 502 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-SKcmXv/apt_archive ./ sbuild-build-depends-python-cobra-dummy 0.invalid.0 [1072 B]
Get:2 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-minimal armhf 3.11.5-3 [800 kB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf libexpat1 armhf 2.5.0-2 [76.8 kB]
Get:4 http://172.17.4.1/private trixie-staging/main armhf python3.11-minimal armhf 3.11.5-3 [1676 kB]
Get:5 http://172.17.4.1/private trixie-staging/main armhf python3-minimal armhf 3.11.4-5 [26.2 kB]
Get:6 http://172.17.4.1/private trixie-staging/main armhf media-types all 10.1.0 [26.9 kB]
Get:7 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-stdlib armhf 3.11.5-3 [1675 kB]
Get:8 http://172.17.4.1/private trixie-staging/main armhf python3.11 armhf 3.11.5-3 [582 kB]
Get:9 http://172.17.4.1/private trixie-staging/main armhf libpython3-stdlib armhf 3.11.4-5 [9200 B]
Get:10 http://172.17.4.1/private trixie-staging/main armhf python3 armhf 3.11.4-5 [26.2 kB]
Get:11 http://172.17.4.1/private trixie-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:12 http://172.17.4.1/private trixie-staging/main armhf groff-base armhf 1.22.4-10 [774 kB]
Get:13 http://172.17.4.1/private trixie-staging/main armhf bsdextrautils armhf 2.39.2-1 [80.5 kB]
Get:14 http://172.17.4.1/private trixie-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:15 http://172.17.4.1/private trixie-staging/main armhf man-db armhf 2.11.2-3 [1342 kB]
Get:16 http://172.17.4.1/private trixie-staging/main armhf openssl armhf 3.0.10-1 [1368 kB]
Get:17 http://172.17.4.1/private trixie-staging/main armhf ca-certificates all 20230311 [153 kB]
Get:18 http://172.17.4.1/private trixie-staging/main armhf libmagic-mgc armhf 1:5.45-2 [314 kB]
Get:19 http://172.17.4.1/private trixie-staging/main armhf libmagic1 armhf 1:5.45-2 [96.1 kB]
Get:20 http://172.17.4.1/private trixie-staging/main armhf file armhf 1:5.45-2 [41.6 kB]
Get:21 http://172.17.4.1/private trixie-staging/main armhf gettext-base armhf 0.21-12 [156 kB]
Get:22 http://172.17.4.1/private trixie-staging/main armhf m4 armhf 1.4.19-4 [256 kB]
Get:23 http://172.17.4.1/private trixie-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:24 http://172.17.4.1/private trixie-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:25 http://172.17.4.1/private trixie-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:26 http://172.17.4.1/private trixie-staging/main armhf autopoint all 0.21-13 [496 kB]
Get:27 http://172.17.4.1/private trixie-staging/main armhf libtcl8.6 armhf 8.6.13+dfsg-2 [904 kB]
Get:28 http://172.17.4.1/private trixie-staging/main armhf libbrotli1 armhf 1.0.9-2+b3 [258 kB]
Get:29 http://172.17.4.1/private trixie-staging/main armhf libpng16-16 armhf 1.6.40-1 [258 kB]
Get:30 http://172.17.4.1/private trixie-staging/main armhf libfreetype6 armhf 2.13.2+dfsg-1 [366 kB]
Get:31 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-mono all 2.37-8 [489 kB]
Get:32 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-core all 2.37-8 [840 kB]
Get:33 http://172.17.4.1/private trixie-staging/main armhf fontconfig-config armhf 2.14.2-6 [316 kB]
Get:34 http://172.17.4.1/private trixie-staging/main armhf libfontconfig1 armhf 2.14.2-6 [367 kB]
Get:35 http://172.17.4.1/private trixie-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:36 http://172.17.4.1/private trixie-staging/main armhf libbsd0 armhf 0.11.7-4 [111 kB]
Get:37 http://172.17.4.1/private trixie-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:38 http://172.17.4.1/private trixie-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:39 http://172.17.4.1/private trixie-staging/main armhf libx11-data all 2:1.8.6-1 [323 kB]
Get:40 http://172.17.4.1/private trixie-staging/main armhf libx11-6 armhf 2:1.8.6-1 [726 kB]
Get:41 http://172.17.4.1/private trixie-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:42 http://172.17.4.1/private trixie-staging/main armhf libxft2 armhf 2.3.6-1 [53.7 kB]
Get:43 http://172.17.4.1/private trixie-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:44 http://172.17.4.1/private trixie-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:45 http://172.17.4.1/private trixie-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:46 http://172.17.4.1/private trixie-staging/main armhf libtk8.6 armhf 8.6.13-2 [680 kB]
Get:47 http://172.17.4.1/private trixie-staging/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-4.1 [477 kB]
Get:48 http://172.17.4.1/private trixie-staging/main armhf blt armhf 2.5.3+dfsg-4.1 [14.9 kB]
Get:49 http://172.17.4.1/private trixie-staging/main armhf cython3 armhf 0.29.36-1 [1212 kB]
Get:50 http://172.17.4.1/private trixie-staging/main armhf libdebhelper-perl all 13.11.6 [81.9 kB]
Get:51 http://172.17.4.1/private trixie-staging/main armhf libtool all 2.4.7-7 [517 kB]
Get:52 http://172.17.4.1/private trixie-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:53 http://172.17.4.1/private trixie-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:54 http://172.17.4.1/private trixie-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:55 http://172.17.4.1/private trixie-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:56 http://172.17.4.1/private trixie-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:57 http://172.17.4.1/private trixie-staging/main armhf libelf1 armhf 0.188-2.1+rpi1 [171 kB]
Get:58 http://172.17.4.1/private trixie-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:59 http://172.17.4.1/private trixie-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:60 http://172.17.4.1/private trixie-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.3 [571 kB]
Get:61 http://172.17.4.1/private trixie-staging/main armhf gettext armhf 0.21-12 [1201 kB]
Get:62 http://172.17.4.1/private trixie-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:63 http://172.17.4.1/private trixie-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:64 http://172.17.4.1/private trixie-staging/main armhf debhelper all 13.11.6 [952 kB]
Get:65 http://172.17.4.1/private trixie-staging/main armhf python3-lib2to3 all 3.11.5-1 [77.5 kB]
Get:66 http://172.17.4.1/private trixie-staging/main armhf python3-distutils all 3.11.5-1 [131 kB]
Get:67 http://172.17.4.1/private trixie-staging/main armhf dh-python all 6.20230825 [106 kB]
Get:68 http://172.17.4.1/private trixie-staging/main armhf fonts-lyx all 2.3.7-1 [186 kB]
Get:69 http://172.17.4.1/private trixie-staging/main armhf libsuitesparseconfig5 armhf 1:5.12.0+dfsg-2 [23.6 kB]
Get:70 http://172.17.4.1/private trixie-staging/main armhf libamd2 armhf 1:5.12.0+dfsg-2 [30.2 kB]
Get:71 http://172.17.4.1/private trixie-staging/main armhf libblas3 armhf 3.11.0-2 [100.0 kB]
Get:72 http://172.17.4.1/private trixie-staging/main armhf libblas-dev armhf 3.11.0-2 [106 kB]
Get:73 http://172.17.4.1/private trixie-staging/main armhf libbtf1 armhf 1:5.12.0+dfsg-2 [24.1 kB]
Get:74 http://172.17.4.1/private trixie-staging/main armhf libcamd2 armhf 1:5.12.0+dfsg-2 [30.7 kB]
Get:75 http://172.17.4.1/private trixie-staging/main armhf libccolamd2 armhf 1:5.12.0+dfsg-2 [31.7 kB]
Get:76 http://172.17.4.1/private trixie-staging/main armhf libcolamd2 armhf 1:5.12.0+dfsg-2 [28.3 kB]
Get:77 http://172.17.4.1/private trixie-staging/main armhf libgfortran5 armhf 12.2.0-14+rpi1 [238 kB]
Get:78 http://172.17.4.1/private trixie-staging/main armhf liblapack3 armhf 3.11.0-2 [1624 kB]
Get:79 http://172.17.4.1/private trixie-staging/main armhf libmetis5 armhf 5.1.0.dfsg-7 [133 kB]
Get:80 http://172.17.4.1/private trixie-staging/main armhf libcholmod3 armhf 1:5.12.0+dfsg-2 [212 kB]
Get:81 http://172.17.4.1/private trixie-staging/main armhf libcxsparse3 armhf 1:5.12.0+dfsg-2 [52.1 kB]
Get:82 http://172.17.4.1/private trixie-staging/main armhf libdeflate0 armhf 1.18-1 [38.3 kB]
Get:83 http://172.17.4.1/private trixie-staging/main armhf libexpat1-dev armhf 2.5.0-2 [130 kB]
Get:84 http://172.17.4.1/private trixie-staging/main armhf libfribidi0 armhf 1.0.13-3 [69.9 kB]
Get:85 http://172.17.4.1/private trixie-staging/main armhf libglib2.0-0 armhf 2.74.6-1 [1203 kB]
Get:86 http://172.17.4.1/private trixie-staging/main armhf libltdl7 armhf 2.4.7-7 [390 kB]
Get:87 http://172.17.4.1/private trixie-staging/main armhf libglpk40 armhf 5.0-1 [327 kB]
Get:88 http://172.17.4.1/private trixie-staging/main armhf libgmpxx4ldbl armhf 2:6.3.0+dfsg-2 [328 kB]
Get:89 http://172.17.4.1/private trixie-staging/main armhf libgmp-dev armhf 2:6.3.0+dfsg-2 [577 kB]
Get:90 http://172.17.4.1/private trixie-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-3 [901 kB]
Get:91 http://172.17.4.1/private trixie-staging/main armhf libklu1 armhf 1:5.12.0+dfsg-2 [51.8 kB]
Get:92 http://172.17.4.1/private trixie-staging/main armhf libldl2 armhf 1:5.12.0+dfsg-2 [23.8 kB]
Get:93 http://172.17.4.1/private trixie-staging/main armhf libmongoose2 armhf 1:5.12.0+dfsg-2 [43.8 kB]
Get:94 http://172.17.4.1/private trixie-staging/main armhf libumfpack5 armhf 1:5.12.0+dfsg-2 [128 kB]
Get:95 http://172.17.4.1/private trixie-staging/main armhf librbio2 armhf 1:5.12.0+dfsg-2 [32.9 kB]
Get:96 http://172.17.4.1/private trixie-staging/main armhf libspqr2 armhf 1:5.12.0+dfsg-2 [68.2 kB]
Get:97 http://172.17.4.1/private trixie-staging/main armhf libsliplu1 armhf 1:5.12.0+dfsg-2 [49.5 kB]
Get:98 http://172.17.4.1/private trixie-staging/main armhf liblapack-dev armhf 3.11.0-2 [3007 kB]
Get:99 http://172.17.4.1/private trixie-staging/main armhf libsuitesparse-dev armhf 1:5.12.0+dfsg-2 [614 kB]
Get:100 http://172.17.4.1/private trixie-staging/main armhf libglpk-dev armhf 5.0-1 [369 kB]
Get:101 http://172.17.4.1/private trixie-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:102 http://172.17.4.1/private trixie-staging/main armhf libharfbuzz0b armhf 8.0.1-1 [2098 kB]
Get:103 http://172.17.4.1/private trixie-staging/main armhf libimagequant0 armhf 2.17.0-1 [28.0 kB]
Get:104 http://172.17.4.1/private trixie-staging/main armhf libjbig0 armhf 2.1-6.1 [27.0 kB]
Get:105 http://172.17.4.1/private trixie-staging/main armhf libjpeg62-turbo armhf 1:2.1.5-2 [143 kB]
Get:106 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:107 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get:108 http://172.17.4.1/private trixie-staging/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:109 http://172.17.4.1/private trixie-staging/main armhf libjs-sphinxdoc all 5.3.0-7 [131 kB]
Get:110 http://172.17.4.1/private trixie-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.4-1 [24.4 kB]
Get:111 http://172.17.4.1/private trixie-staging/main armhf liblcms2-2 armhf 2.14-2 [124 kB]
Get:112 http://172.17.4.1/private trixie-staging/main armhf liblerc4 armhf 4.0.0+ds-3 [133 kB]
Get:113 http://172.17.4.1/private trixie-staging/main armhf libopenjp2-7 armhf 2.5.0-2 [164 kB]
Get:114 http://172.17.4.1/private trixie-staging/main armhf libpython3.11 armhf 3.11.5-3 [1660 kB]
Get:115 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-dev armhf 3.11.5-3 [3370 kB]
Get:116 http://172.17.4.1/private trixie-staging/main armhf libpython3-dev armhf 3.11.4-5 [9432 B]
Get:117 http://172.17.4.1/private trixie-staging/main armhf libqhull-r8.0 armhf 2020.2-6 [216 kB]
Get:118 http://172.17.4.1/private trixie-staging/main armhf libraqm0 armhf 0.10.1-1 [11.7 kB]
Get:119 http://172.17.4.1/private trixie-staging/main armhf libsbml5 armhf 5.19.7+dfsg-2 [1702 kB]
Get:120 http://172.17.4.1/private trixie-staging/main armhf libwebp7 armhf 1.2.4-0.3 [242 kB]
Get:121 http://172.17.4.1/private trixie-staging/main armhf libtiff6 armhf 4.5.1+git230720-1 [298 kB]
Get:122 http://172.17.4.1/private trixie-staging/main armhf libwebpdemux2 armhf 1.2.4-0.3 [98.5 kB]
Get:123 http://172.17.4.1/private trixie-staging/main armhf libwebpmux3 armhf 1.2.4-0.3 [106 kB]
Get:124 http://172.17.4.1/private trixie-staging/main armhf libxslt1.1 armhf 1.1.35-1 [221 kB]
Get:125 http://172.17.4.1/private trixie-staging/main armhf python-matplotlib-data all 3.6.3-1 [2744 kB]
Get:126 http://172.17.4.1/private trixie-staging/main armhf python3-idna all 3.3-2 [39.1 kB]
Get:127 http://172.17.4.1/private trixie-staging/main armhf python3-sniffio all 1.2.0-1 [6372 B]
Get:128 http://172.17.4.1/private trixie-staging/main armhf python3-typing-extensions all 4.7.1-2 [62.2 kB]
Get:129 http://172.17.4.1/private trixie-staging/main armhf python3-anyio all 3.7.0-1 [55.7 kB]
Get:130 http://172.17.4.1/private trixie-staging/main armhf python3-appdirs all 1.4.4-4 [12.5 kB]
Get:131 http://172.17.4.1/private trixie-staging/main armhf python3-attr all 23.1.0-2 [67.1 kB]
Get:132 http://172.17.4.1/private trixie-staging/main armhf python3-brotli armhf 1.0.9-2+b3 [278 kB]
Get:133 http://172.17.4.1/private trixie-staging/main armhf python3-certifi all 2022.9.24-1 [153 kB]
Get:134 http://172.17.4.1/private trixie-staging/main armhf python3-pkg-resources all 68.1.2-1 [241 kB]
Get:135 http://172.17.4.1/private trixie-staging/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB]
Get:136 http://172.17.4.1/private trixie-staging/main armhf python3-charset-normalizer all 3.2.0-1 [50.7 kB]
Get:137 http://172.17.4.1/private trixie-staging/main armhf python3-colorama all 0.4.6-4 [36.2 kB]
Get:138 http://172.17.4.1/private trixie-staging/main armhf python3-click all 8.1.6-1 [93.8 kB]
Get:139 http://172.17.4.1/private trixie-staging/main armhf python3-numpy armhf 1:1.24.2-1 [3826 kB]
Get:140 http://172.17.4.1/private trixie-staging/main armhf python3-contourpy armhf 1.0.7-1 [141 kB]
Get:141 http://172.17.4.1/private trixie-staging/main armhf python3-cpuinfo all 5.0.0-5 [19.2 kB]
Get:142 http://172.17.4.1/private trixie-staging/main armhf python3-cycler all 0.11.0-1 [8020 B]
Get:143 http://172.17.4.1/private trixie-staging/main armhf python3-six all 1.16.0-4 [17.5 kB]
Get:144 http://172.17.4.1/private trixie-staging/main armhf python3-dateutil all 2.8.2-3 [78.4 kB]
Get:145 http://172.17.4.1/private trixie-staging/main armhf python3-decorator all 5.1.1-5 [15.1 kB]
Get:146 http://172.17.4.1/private trixie-staging/main armhf python3-depinfo armhf 2.2.0-1 [11.6 kB]
Get:147 http://172.17.4.1/private trixie-staging/main armhf python3.11-dev armhf 3.11.5-3 [623 kB]
Get:148 http://172.17.4.1/private trixie-staging/main armhf python3-dev armhf 3.11.4-5 [26.2 kB]
Get:149 http://172.17.4.1/private trixie-staging/main armhf python3-diskcache all 5.4.0-3 [33.9 kB]
Get:150 http://172.17.4.1/private trixie-staging/main armhf python3-scipy armhf 1.10.1-2+rpi1 [13.6 MB]
Get:151 http://172.17.4.1/private trixie-staging/main armhf python3-ufolib2 all 0.14.0+dfsg1-1 [34.3 kB]
Get:152 http://172.17.4.1/private trixie-staging/main armhf python3-mpmath all 1.2.1-2 [418 kB]
Get:153 http://172.17.4.1/private trixie-staging/main armhf python3-sympy all 1.12-3 [3868 kB]
Get:154 http://172.17.4.1/private trixie-staging/main armhf python3-tz all 2023.3-4 [30.8 kB]
Get:155 http://172.17.4.1/private trixie-staging/main armhf python3-fs all 2.4.16-2 [95.2 kB]
Get:156 http://172.17.4.1/private trixie-staging/main armhf python3-lxml armhf 4.9.3-1 [1039 kB]
Get:157 http://172.17.4.1/private trixie-staging/main armhf python3-lz4 armhf 4.0.2+dfsg-1+b1 [23.9 kB]
Get:158 http://172.17.4.1/private trixie-staging/main armhf python3-unicodedata2 armhf 14.0.0+ds2-1+b1 [298 kB]
Get:159 http://172.17.4.1/private trixie-staging/main armhf unicode-data all 15.0.0-1 [7984 kB]
Get:160 http://172.17.4.1/private trixie-staging/main armhf python3-fonttools armhf 4.38.0-1 [1047 kB]
Get:161 http://172.17.4.1/private trixie-staging/main armhf python3-future all 0.18.2-6 [348 kB]
Get:162 http://172.17.4.1/private trixie-staging/main armhf python3-h11 all 0.14.0-1 [50.1 kB]
Get:163 http://172.17.4.1/private trixie-staging/main armhf python3-httpcore all 0.17.3-1 [41.7 kB]
Get:164 http://172.17.4.1/private trixie-staging/main armhf python3-pygments all 2.15.1+dfsg-1 [817 kB]
Get:165 http://172.17.4.1/private trixie-staging/main armhf python3-mdurl all 0.1.2-1 [9444 B]
Get:166 http://172.17.4.1/private trixie-staging/main armhf python3-markdown-it all 3.0.0-2 [62.5 kB]
Get:167 http://172.17.4.1/private trixie-staging/main armhf python3-rich all 13.3.1-2 [198 kB]
Get:168 http://172.17.4.1/private trixie-staging/main armhf python3-rfc3986 all 1.5.0-3 [21.6 kB]
Get:169 http://172.17.4.1/private trixie-staging/main armhf python3-httpx all 0.23.3-1 [72.3 kB]
Get:170 http://172.17.4.1/private trixie-staging/main armhf python3-more-itertools all 10.1.0-1 [59.1 kB]
Get:171 http://172.17.4.1/private trixie-staging/main armhf python3-zipp all 1.0.0-6 [6696 B]
Get:172 http://172.17.4.1/private trixie-staging/main armhf python3-importlib-resources all 6.0.1-1 [21.7 kB]
Get:173 http://172.17.4.1/private trixie-staging/main armhf python3-iniconfig all 1.1.1-2 [6396 B]
Get:174 http://172.17.4.1/private trixie-staging/main armhf python3-pyrsistent armhf 0.18.1-1+b1 [57.6 kB]
Get:175 http://172.17.4.1/private trixie-staging/main armhf python3-jsonschema all 4.10.3-2 [66.2 kB]
Get:176 http://172.17.4.1/private trixie-staging/main armhf python3-kiwisolver armhf 1.4.4-1 [52.3 kB]
Get:177 http://172.17.4.1/private trixie-staging/main armhf python3-pil armhf 10.0.0-1 [437 kB]
Get:178 http://172.17.4.1/private trixie-staging/main armhf python3-tk armhf 3.11.2-3 [95.2 kB]
Get:179 http://172.17.4.1/private trixie-staging/main armhf python3-pil.imagetk armhf 10.0.0-1 [75.2 kB]
Get:180 http://172.17.4.1/private trixie-staging/main armhf python3-pyparsing all 3.1.1-1 [145 kB]
Get:181 http://172.17.4.1/private trixie-staging/main armhf python3-packaging all 23.1-1 [37.4 kB]
Get:182 http://172.17.4.1/private trixie-staging/main armhf python3-matplotlib armhf 3.6.3-1 [7453 kB]
Get:183 http://172.17.4.1/private trixie-staging/main armhf python3-swiglpk armhf 5.0.8-1 [55.2 kB]
Get:184 http://172.17.4.1/private trixie-staging/main armhf python3-optlang all 1.7.0-1 [79.6 kB]
Get:185 http://172.17.4.1/private trixie-staging/main armhf python3-pandas-lib armhf 1.5.3+dfsg-2+rpi1 [2984 kB]
Get:186 http://172.17.4.1/private trixie-staging/main armhf python3-pandas all 1.5.3+dfsg-6 [2886 kB]
Get:187 http://172.17.4.1/private trixie-staging/main armhf python3-setuptools all 68.1.2-1 [468 kB]
Get:188 http://172.17.4.1/private trixie-staging/main armhf python3-wheel all 0.41.0-2 [53.3 kB]
Get:189 http://172.17.4.1/private trixie-staging/main armhf python3-pip all 23.2+dfsg-1 [1353 kB]
Get:190 http://172.17.4.1/private trixie-staging/main armhf python3-pipdeptree armhf 2.2.0-3 [20.6 kB]
Get:191 http://172.17.4.1/private trixie-staging/main armhf python3-pluggy all 1.3.0-1 [25.1 kB]
Get:192 http://172.17.4.1/private trixie-staging/main armhf python3-pydantic all 1.10.4-1 [171 kB]
Get:193 http://172.17.4.1/private trixie-staging/main armhf python3-pytest all 7.4.2-1 [238 kB]
Get:194 http://172.17.4.1/private trixie-staging/main armhf python3-pytest-benchmark all 4.0.0-2 [43.7 kB]
Get:195 http://172.17.4.1/private trixie-staging/main armhf python3-pytest-mock all 3.11.1-1 [17.1 kB]
Get:196 http://172.17.4.1/private trixie-staging/main armhf python3-urllib3 all 1.26.16-1 [115 kB]
Get:197 http://172.17.4.1/private trixie-staging/main armhf python3-requests all 2.31.0+dfsg-1 [68.6 kB]
Get:198 http://172.17.4.1/private trixie-staging/main armhf python3-ruamel.yaml.clib armhf 0.2.7-1+b1 [94.2 kB]
Get:199 http://172.17.4.1/private trixie-staging/main armhf python3-ruamel.yaml all 0.17.21-1 [103 kB]
Get:200 http://172.17.4.1/private trixie-staging/main armhf swig4.0 armhf 4.1.0-0.3 [1220 kB]
Get:201 http://172.17.4.1/private trixie-staging/main armhf swig all 4.1.0-0.3 [321 kB]
Get:202 http://172.17.4.1/private trixie-staging/main armhf python3-sbml5 armhf 5.19.7+dfsg-2 [2918 kB]
Get:203 http://172.17.4.1/private trixie-staging/main armhf python3-simplejson armhf 3.19.1-1 [57.8 kB]
Get:204 http://172.17.4.1/private trixie-staging/main armhf python3-tabulate all 0.8.9-1 [35.2 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up libpython3.11-minimal:armhf (3.11.5-3) ...
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No schema files found: doing nothing.
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invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of restart.
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
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Updating certificates in /etc/ssl/certs...
140 added, 0 removed; done.
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
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Setting up groff-base (1.22.4-10) ...
Setting up libklu1:armhf (1:5.12.0+dfsg-2) ...
Setting up libccolamd2:armhf (1:5.12.0+dfsg-2) ...
Setting up libxslt1.1:armhf (1.1.35-1) ...
Setting up libx11-6:armhf (2:1.8.6-1) ...
Setting up libharfbuzz0b:armhf (8.0.1-1) ...
Setting up python3-dateutil (2.8.2-3) ...
Setting up python3-mpmath (1.2.1-2) ...
Setting up python3-diskcache (5.4.0-3) ...
Setting up python3-lib2to3 (3.11.5-1) ...
Setting up python3-appdirs (1.4.4-4) ...
Setting up python3-swiglpk (5.0.8-1) ...
Setting up libcholmod3:armhf (1:5.12.0+dfsg-2) ...
Setting up liblbfgsb0:armhf (3.0+dfsg.4-1) ...
Setting up python3-pkg-resources (68.1.2-1) ...
Setting up python3-distutils (3.11.5-1) ...
Setting up dh-python (6.20230825) ...
Setting up python3-more-itertools (10.1.0-1) ...
Setting up python3-iniconfig (1.1.1-2) ...
Setting up python3-sniffio (1.2.0-1) ...
Setting up python3-sympy (1.12-3) ...
Setting up python3-attr (23.1.0-2) ...
Setting up libspqr2:armhf (1:5.12.0+dfsg-2) ...
Setting up libpython3-dev:armhf (3.11.4-5) ...
Setting up python3-setuptools (68.1.2-1) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up python3-anyio (3.7.0-1) ...
Setting up python3-colorama (0.4.6-4) ...
Setting up python3-lz4 (4.0.2+dfsg-1+b1) ...
Setting up python3.11-dev (3.11.5-3) ...
Setting up python3-charset-normalizer (3.2.0-1) ...
Setting up python3-pytest (7.4.2-1) ...
Setting up python3-unicodedata2 (14.0.0+ds2-1+b1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up python3-ruamel.yaml.clib:armhf (0.2.7-1+b1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up python3-tabulate (0.8.9-1) ...
Setting up python3-zipp (1.0.0-6) ...
Setting up python3-click (8.1.6-1) ...
Setting up man-db (2.11.2-3) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-wheel (0.41.0-2) ...
Setting up python3-fs (2.4.16-2) ...
Setting up python3-pygments (2.15.1+dfsg-1) ...
Setting up python3-chardet (5.2.0+dfsg-1) ...
Setting up libumfpack5:armhf (1:5.12.0+dfsg-2) ...
Setting up python3-rfc3986 (1.5.0-3) ...
Setting up python3-jsonschema (4.10.3-2) ...
Setting up python3-pydantic (1.10.4-1) ...
Setting up libraqm0:armhf (0.10.1-1) ...
Setting up python3-dev (3.11.4-5) ...
Setting up python3-requests (2.31.0+dfsg-1) ...
Setting up python3-depinfo (2.2.0-1) ...
Setting up python3-pip (23.2+dfsg-1) ...
Setting up python3-numpy (1:1.24.2-1) ...
Setting up python3-ruamel.yaml (0.17.21-1) ...
Setting up python3-pytest-mock (3.11.1-1) ...
Setting up python3-lxml:armhf (4.9.3-1) ...
Setting up python3-contourpy (1.0.7-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up python3-future (0.18.2-6) ...
update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode
update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode
Setting up python3-pipdeptree (2.2.0-3) ...
Setting up python3-optlang (1.7.0-1) ...
Setting up python3-pytest-benchmark (4.0.0-2) ...
Setting up python3-httpcore (0.17.3-1) ...
Setting up python3-scipy (1.10.1-2+rpi1) ...
Setting up libsuitesparse-dev:armhf (1:5.12.0+dfsg-2) ...
Setting up python3-importlib-resources (6.0.1-1) ...
Setting up python3-rich (13.3.1-2) ...
Setting up python3-pandas-lib:armhf (1.5.3+dfsg-2+rpi1) ...
Setting up debhelper (13.11.6) ...
Setting up python3-pandas (1.5.3+dfsg-6) ...
Setting up python3-httpx (0.23.3-1) ...
Setting up libglpk-dev:armhf (5.0-1) ...
Setting up python3-fonttools (4.38.0-1) ...
Setting up python3-ufolib2 (0.14.0+dfsg1-1) ...
Processing triggers for sgml-base (1.31) ...
Setting up libfontconfig1:armhf (2.14.2-6) ...
Setting up libxft2:armhf (2.3.6-1) ...
Setting up libtk8.6:armhf (8.6.13-2) ...
Processing triggers for libc-bin (2.36-9+rpi1+deb12u1) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ...
Setting up blt (2.5.3+dfsg-4.1) ...
Setting up python3-tk:armhf (3.11.2-3) ...
Setting up python3-pil.imagetk:armhf (10.0.0-1) ...
Setting up python3-pil:armhf (10.0.0-1) ...
Setting up python3-matplotlib (3.6.3-1) ...
Setting up sbuild-build-depends-python-cobra-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20230311) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for libc-bin (2.36-9+rpi1+deb12u1) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.4-armmp armhf (armv7l)
Toolchain package versions: binutils_2.40-2+rpi2 dpkg-dev_1.21.22+rpi1 g++-12_12.2.0-14+rpi1 gcc-12_12.2.0-14+rpi1 libc6-dev_2.36-9+rpi1+deb12u1 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 linux-libc-dev_6.1.38-1+rpi1
Package versions: adduser_3.137 apt_2.7.3 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13+rpi1 base-passwd_3.6.1 bash_5.2.15-2 binutils_2.40-2+rpi2 binutils-arm-linux-gnueabihf_2.40-2+rpi2 binutils-common_2.40-2+rpi2 blt_2.5.3+dfsg-4.1 bsdextrautils_2.39.2-1 bsdutils_1:2.39.2-1 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20230311 coreutils_9.1-1 cpp_4:12.2.0-3+rpi1 cpp-12_12.2.0-14+rpi1 cython3_0.29.36-1 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.6 debianutils_5.13 dh-autoreconf_20 dh-python_6.20230825 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dirmngr_2.2.40-1.1 dpkg_1.21.22+rpi1 dpkg-dev_1.21.22+rpi1 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.32.1-1 file_1:5.45-2 findutils_4.9.0-4 fontconfig-config_2.14.2-6 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lyx_2.3.7-1 g++_4:12.2.0-3+rpi1 g++-12_12.2.0-14+rpi1 gcc_4:12.2.0-3+rpi1 gcc-12_12.2.0-14+rpi1 gcc-12-base_12.2.0-14+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-12 gettext-base_0.21-12 gnupg_2.2.40-1.1 gnupg-l10n_2.2.40-1.1 gnupg-utils_2.2.40-1.1 gpg_2.2.40-1.1 gpg-agent_2.2.40-1.1 gpg-wks-client_2.2.40-1.1 gpg-wks-server_2.2.40-1.1 gpgconf_2.2.40-1.1 gpgsm_2.2.40-1.1 gpgv_2.2.40-1.1 grep_3.8-5 groff-base_1.22.4-10 gzip_1.12-1 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20221126-1 krb5-locales_1.20.1-3 libacl1_2.3.1-3 libamd2_1:5.12.0+dfsg-2 libapt-pkg6.0_2.7.3 libarchive-zip-perl_1.68-1 libasan8_12.2.0-14+rpi1 libassuan0_2.5.6-1 libatomic1_12.2.0-14+rpi1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.1-1 libaudit1_1:3.1.1-1 libbinutils_2.40-2+rpi2 libblas-dev_3.11.0-2 libblas3_3.11.0-2 libblkid1_2.39.2-1 libbrotli1_1.0.9-2+b3 libbsd0_0.11.7-4 libbtf1_1:5.12.0+dfsg-2 libbz2-1.0_1.0.8-5+b2 libc-bin_2.36-9+rpi1+deb12u1 libc-dev-bin_2.36-9+rpi1+deb12u1 libc6_2.36-9+rpi1+deb12u1 libc6-dev_2.36-9+rpi1+deb12u1 libcamd2_1:5.12.0+dfsg-2 libcap-ng0_0.8.3-1+b1 libcap2_1:2.66-4 libcap2-bin_1:2.66-4 libcc1-0_12.2.0-14+rpi1 libccolamd2_1:5.12.0+dfsg-2 libcholmod3_1:5.12.0+dfsg-2 libcolamd2_1:5.12.0+dfsg-2 libcom-err2_1.47.0-2 libcrypt-dev_1:4.4.36-2 libcrypt1_1:4.4.36-2 libctf-nobfd0_2.40-2+rpi2 libctf0_2.40-2+rpi2 libcxsparse3_1:5.12.0+dfsg-2 libdb5.3_5.3.28+dfsg2-2 libdebconfclient0_0.270 libdebhelper-perl_13.11.6 libdeflate0_1.18-1 libdpkg-perl_1.21.22+rpi1 libelf1_0.188-2.1+rpi1 libexpat1_2.5.0-2 libexpat1-dev_2.5.0-2 libext2fs2_1.47.0-2 libfakeroot_1.32.1-1 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-stripnondeterminism-perl_1.13.1-1 libfontconfig1_2.14.2-6 libfreetype6_2.13.2+dfsg-1 libfribidi0_1.0.13-3 libgcc-12-dev_12.2.0-14+rpi1 libgcc-s1_12.2.0-14+rpi1 libgcrypt20_1.10.2-2 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgfortran5_12.2.0-14+rpi1 libglib2.0-0_2.74.6-1 libglpk-dev_5.0-1 libglpk40_5.0-1 libgmp-dev_2:6.3.0+dfsg-2 libgmp10_2:6.3.0+dfsg-2 libgmpxx4ldbl_2:6.3.0+dfsg-2 libgnutls30_3.8.1-4 libgomp1_12.2.0-14+rpi1 libgpg-error0_1.47-2 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.20.1-3 libharfbuzz0b_8.0.1-1 libhogweed6_3.9.1-2 libicu72_72.1-3 libidn2-0_2.3.4-1 libimagequant0_2.17.0-1 libisl23_0.26-3 libjansson4_2.14-2 libjbig0_2.1-6.1 libjpeg62-turbo_1:2.1.5-2 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-jquery-ui_1.13.2+dfsg-1 libjs-sphinxdoc_5.3.0-7 libjs-underscore_1.13.4~dfsg+~1.11.4-3 libk5crypto3_1.20.1-3 libkeyutils1_1.6.3-2 libklu1_1:5.12.0+dfsg-2 libkrb5-3_1.20.1-3 libkrb5support0_1.20.1-3 libksba8_1.6.3-2 liblapack-dev_3.11.0-2 liblapack3_3.11.0-2 liblbfgsb0_3.0+dfsg.4-1 liblcms2-2_2.14-2 libldap-2.5-0_2.5.13+dfsg-5+rpi1 libldl2_1:5.12.0+dfsg-2 liblerc4_4.0.0+ds-3 libltdl7_2.4.7-7 liblz4-1_1.9.4-1+rpi1+b1 liblzma5_5.4.4-0.1 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.1.0-1 libmetis5_5.1.0.dfsg-7 libmongoose2_1:5.12.0+dfsg-2 libmount1_2.39.2-1 libmpc3_1.3.1-1 libmpfr6_4.2.0-1 libncursesw6_6.4+20230625-2 libnettle8_3.9.1-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libopenjp2-7_2.5.0-2 libp11-kit0_0.25.0-4 libpam-cap_1:2.66-4 libpam-modules_1.5.2-7 libpam-modules-bin_1.5.2-7 libpam-runtime_1.5.2-7 libpam0g_1.5.2-7 libpcre2-8-0_10.42-4 libpcre3_2:8.39-15 libperl5.36_5.36.0-7 libpipeline1_1.5.7-1 libpng16-16_1.6.40-1 libpython3-dev_3.11.4-5 libpython3-stdlib_3.11.4-5 libpython3.11_3.11.5-3 libpython3.11-dev_3.11.5-3 libpython3.11-minimal_3.11.5-3 libpython3.11-stdlib_3.11.5-3 libqhull-r8.0_2020.2-6 libraqm0_0.10.1-1 librbio2_1:5.12.0+dfsg-2 libreadline8_8.2-1.3 libsasl2-2_2.1.28+dfsg1-3 libsasl2-modules-db_2.1.28+dfsg1-3 libsbml5_5.19.7+dfsg-2 libseccomp2_2.5.4-1+rpi1+b1 libselinux1_3.5-1 libsemanage-common_3.5-1 libsemanage2_3.4-1+b2 libsepol1_3.1-1 libsepol2_3.5-1 libsliplu1_1:5.12.0+dfsg-2 libsmartcols1_2.39.2-1 libspqr2_1:5.12.0+dfsg-2 libsqlite3-0_3.43.1-1 libss2_1.47.0-2 libssl1.1_1.1.1o-1 libssl3_3.0.10-1 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 libsub-override-perl_0.09-4 libsuitesparse-dev_1:5.12.0+dfsg-2 libsuitesparseconfig5_1:5.12.0+dfsg-2 libsystemd0_252.12-1~deb12u1+rpi1 libtasn1-6_4.19.0-3 libtcl8.6_8.6.13+dfsg-2 libtext-glob-perl_0.11-3 libtiff6_4.5.1+git230720-1 libtinfo6_6.4+20230625-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtk8.6_8.6.13-2 libtool_2.4.7-7 libubsan1_12.2.0-14+rpi1 libuchardet0_0.0.7-1 libudev1_252.12-1~deb12u1+rpi1 libumfpack5_1:5.12.0+dfsg-2 libunistring2_1.0-2 libunistring5_1.1-2 libuuid1_2.39.2-1 libwebp7_1.2.4-0.3 libwebpdemux2_1.2.4-0.3 libwebpmux3_1.2.4-0.3 libx11-6_2:1.8.6-1 libx11-data_2:1.8.6-1 libxau6_1:1.0.9-1 libxcb1_1.15-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxft2_2.3.6-1 libxml2_2.9.14+dfsg-1.3 libxrender1_1:0.9.10-1.1 libxslt1.1_1.1.35-1 libxss1_1:1.2.3-1 libxxhash0_0.8.1-1 libzstd1_1.5.5+dfsg2-1 linux-libc-dev_6.1.38-1+rpi1 login_1:4.13+dfsg1-1 logsave_1.47.0-2 lsb-base_11.6+rpi1 m4_1.4.19-4 make_4.3-4.1 man-db_2.11.2-3 mawk_1.3.4.20230808-1 media-types_10.1.0 mount_2.39.2-1 nano_7.2-1 ncurses-base_6.4+20230625-2 ncurses-bin_6.4+20230625-2 netbase_6.4 openssl_3.0.10-1 passwd_1:4.13+dfsg1-1 patch_2.7.6-7 perl_5.36.0-7 perl-base_5.36.0-7 perl-modules-5.36_5.36.0-9 pinentry-curses_1.2.1-1 po-debconf_1.0.21+nmu1 python-matplotlib-data_3.6.3-1 python3_3.11.4-5 python3-anyio_3.7.0-1 python3-appdirs_1.4.4-4 python3-attr_23.1.0-2 python3-brotli_1.0.9-2+b3 python3-certifi_2022.9.24-1 python3-chardet_5.2.0+dfsg-1 python3-charset-normalizer_3.2.0-1 python3-click_8.1.6-1 python3-colorama_0.4.6-4 python3-contourpy_1.0.7-1 python3-cpuinfo_5.0.0-5 python3-cycler_0.11.0-1 python3-dateutil_2.8.2-3 python3-decorator_5.1.1-5 python3-depinfo_2.2.0-1 python3-dev_3.11.4-5 python3-diskcache_5.4.0-3 python3-distutils_3.11.5-1 python3-fonttools_4.38.0-1 python3-fs_2.4.16-2 python3-future_0.18.2-6 python3-h11_0.14.0-1 python3-httpcore_0.17.3-1 python3-httpx_0.23.3-1 python3-idna_3.3-2 python3-importlib-resources_6.0.1-1 python3-iniconfig_1.1.1-2 python3-jsonschema_4.10.3-2 python3-kiwisolver_1.4.4-1 python3-lib2to3_3.11.5-1 python3-lxml_4.9.3-1 python3-lz4_4.0.2+dfsg-1+b1 python3-markdown-it_3.0.0-2 python3-matplotlib_3.6.3-1 python3-mdurl_0.1.2-1 python3-minimal_3.11.4-5 python3-more-itertools_10.1.0-1 python3-mpmath_1.2.1-2 python3-numpy_1:1.24.2-1 python3-optlang_1.7.0-1 python3-packaging_23.1-1 python3-pandas_1.5.3+dfsg-6 python3-pandas-lib_1.5.3+dfsg-2+rpi1 python3-pil_10.0.0-1 python3-pil.imagetk_10.0.0-1 python3-pip_23.2+dfsg-1 python3-pipdeptree_2.2.0-3 python3-pkg-resources_68.1.2-1 python3-pluggy_1.3.0-1 python3-pydantic_1.10.4-1 python3-pygments_2.15.1+dfsg-1 python3-pyparsing_3.1.1-1 python3-pyrsistent_0.18.1-1+b1 python3-pytest_7.4.2-1 python3-pytest-benchmark_4.0.0-2 python3-pytest-mock_3.11.1-1 python3-requests_2.31.0+dfsg-1 python3-rfc3986_1.5.0-3 python3-rich_13.3.1-2 python3-ruamel.yaml_0.17.21-1 python3-ruamel.yaml.clib_0.2.7-1+b1 python3-sbml5_5.19.7+dfsg-2 python3-scipy_1.10.1-2+rpi1 python3-setuptools_68.1.2-1 python3-simplejson_3.19.1-1 python3-six_1.16.0-4 python3-sniffio_1.2.0-1 python3-swiglpk_5.0.8-1 python3-sympy_1.12-3 python3-tabulate_0.8.9-1 python3-tk_3.11.2-3 python3-typing-extensions_4.7.1-2 python3-tz_2023.3-4 python3-ufolib2_0.14.0+dfsg1-1 python3-unicodedata2_14.0.0+ds2-1+b1 python3-urllib3_1.26.16-1 python3-wheel_0.41.0-2 python3-zipp_1.0.0-6 python3.11_3.11.5-3 python3.11-dev_3.11.5-3 python3.11-minimal_3.11.5-3 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.3 rpcsvc-proto_1.4.3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-cobra-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 sgml-base_1.31 swig_4.1.0-0.3 swig4.0_4.1.0-0.3 sysvinit-utils_3.07-1 tar_1.34+dfsg-1.2 tk8.6-blt2.5_2.5.3+dfsg-4.1 tzdata_2023c-10 unicode-data_15.0.0-1 usrmerge_37 util-linux_2.39.2-1 util-linux-extra_2.39.2-1 x11-common_1:7.7+23 xz-utils_5.4.4-0.1 zlib1g_1:1.2.13.dfsg-3 zlib1g-dev_1:1.2.13.dfsg-3

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: Signature made Wed Sep 20 14:24:06 2023 UTC
gpgv:                using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA
gpgv:                issuer "nilesh@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./python-cobra_0.26.3-2.dsc: no acceptable signature found
dpkg-source: info: extracting python-cobra in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking python-cobra_0.26.3.orig.tar.gz
dpkg-source: info: unpacking python-cobra_0.26.3-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying mathjax.patch
dpkg-source: info: applying xfail_test_show_versions.patch
dpkg-source: info: applying ignore_tests.patch
dpkg-source: info: applying do-not-seek-for-name.patch
dpkg-source: info: applying 32-bit-test.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=trixie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=trixie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=trixie-staging-armhf-sbuild-4eecc36f-ca71-4609-b96a-83136038465d
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package python-cobra
dpkg-buildpackage: info: source version 0.26.3-2
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --with python3 --buildsystem=pybuild
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
I: pybuild base:291: python3.11 setup.py clean 
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build' (and everything under it)
'build/bdist.linux-armv7l' does not exist -- can't clean it
'build/scripts-3.11' does not exist -- can't clean it
rm -f cobra/solvers/cglpk.c
rm -rf .pytest_cache
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild
   dh_update_autotools_config -a -O--buildsystem=pybuild
   dh_autoreconf -a -O--buildsystem=pybuild
   dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:291: python3.11 setup.py config 
running config
   dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:291: /usr/bin/python3 setup.py build 
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra
copying src/cobra/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra
copying src/cobra/exceptions.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/configuration.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/dictlist.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/formula.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/gene.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/group.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/metabolite.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/model.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/object.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/reaction.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/singleton.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/solution.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
copying src/cobra/core/species.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data
copying src/cobra/data/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/deletion.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/fastcc.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/gapfilling.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/geometric.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/helpers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/loopless.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/moma.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/parsimonious.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/phenotype_phase_plane.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/reaction.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/room.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/variability.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io
copying src/cobra/io/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io
copying src/cobra/io/dict.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io
copying src/cobra/io/json.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io
copying src/cobra/io/mat.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io
copying src/cobra/io/yaml.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io
copying src/cobra/io/sbml.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
copying src/cobra/manipulation/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
copying src/cobra/manipulation/annotate.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
copying src/cobra/manipulation/delete.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
copying src/cobra/manipulation/modify.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
copying src/cobra/manipulation/validate.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium
copying src/cobra/medium/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium
copying src/cobra/medium/annotations.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium
copying src/cobra/medium/boundary_types.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium
copying src/cobra/medium/minimal_medium.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
copying src/cobra/sampling/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
copying src/cobra/sampling/achr.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
copying src/cobra/sampling/core.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
copying src/cobra/sampling/hr_sampler.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
copying src/cobra/sampling/optgp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
copying src/cobra/sampling/sampling.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary
copying src/cobra/summary/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary
copying src/cobra/summary/metabolite_summary.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary
copying src/cobra/summary/model_summary.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary
copying src/cobra/summary/reaction_summary.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary
copying src/cobra/summary/summary.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util
copying src/cobra/util/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util
copying src/cobra/util/array.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util
copying src/cobra/util/context.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util
copying src/cobra/util/process_pool.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util
copying src/cobra/util/solver.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util
copying src/cobra/util/util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
copying src/cobra/io/web/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
copying src/cobra/io/web/abstract_model_repository.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
copying src/cobra/io/web/bigg_models_repository.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
copying src/cobra/io/web/biomodels_repository.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
copying src/cobra/io/web/cobrapy_repository.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
copying src/cobra/io/web/load.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web
copying src/cobra/data/iJO1366.xml.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data
copying src/cobra/data/mini.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data
copying src/cobra/data/mini.mat -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data
copying src/cobra/data/mini.yml -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data
copying src/cobra/data/mini_cobra.xml -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data
copying src/cobra/data/salmonella.xml.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data
copying src/cobra/data/textbook.xml.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data
copying src/cobra/io/schema_v1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io
   dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:291: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build; python3.11 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.11.5, pytest-7.4.2, pluggy-1.3.0
benchmark: 4.0.0 (defaults: timer=time.perf_counter disable_gc=False min_rounds=5 min_time=0.000005 max_time=1.0 calibration_precision=10 warmup=False warmup_iterations=100000)
rootdir: /<<PKGBUILDDIR>>
configfile: tox.ini
plugins: anyio-3.7.0, benchmark-4.0.0, mock-3.11.1
collected 550 items

tests/test_core/test_configuration.py ......                             [  1%]
tests/test_core/test_core_reaction.py ..........ss...................... [  7%]
...................x......                                               [ 12%]
tests/test_core/test_dictlist.py ......................                  [ 16%]
tests/test_core/test_formula.py .....                                    [ 16%]
tests/test_core/test_gene.py .                                           [ 17%]
tests/test_core/test_gpr.py .....................x..x................... [ 25%]
..........................                                               [ 29%]
tests/test_core/test_group.py ..                                         [ 30%]
tests/test_core/test_metabolite.py ...ss.ss.                             [ 31%]
tests/test_core/test_model.py .......................................... [ 39%]
...........s..s.ss.                                                      [ 42%]
tests/test_core/test_solution.py .ss                                     [ 43%]
tests/test_flux_analysis/test_deletion.py ....s.....                     [ 45%]
tests/test_flux_analysis/test_fastcc.py ....                             [ 46%]
tests/test_flux_analysis/test_geometric.py ..                            [ 46%]
tests/test_flux_analysis/test_moma.py .                                  [ 46%]
tests/test_flux_analysis/test_parsimonious.py ..                         [ 46%]
tests/test_flux_analysis/test_reaction.py .                              [ 47%]
tests/test_flux_analysis/test_room.py ....                               [ 47%]
tests/test_flux_analysis/test_variability.py .......                     [ 49%]
tests/test_flux_analysis/test_deletion.py sss                            [ 49%]
tests/test_flux_analysis/test_moma.py s                                  [ 49%]
tests/test_flux_analysis/test_deletion.py ......                         [ 50%]
tests/test_flux_analysis/test_gapfilling.py .                            [ 51%]
tests/test_flux_analysis/test_helpers.py ...                             [ 51%]
tests/test_flux_analysis/test_loopless.py .....                          [ 52%]
tests/test_flux_analysis/test_phenotype_phase_plane.py ......            [ 53%]
tests/test_flux_analysis/test_variability.py .......                     [ 54%]
tests/test_io/test_annotation.py ..                                      [ 55%]
tests/test_io/test_annotation_format.py ..                               [ 55%]
tests/test_io/test_io_order.py ...........................               [ 60%]
tests/test_io/test_json.py ....                                          [ 61%]
tests/test_io/test_mat.py .......ssss....                                [ 64%]
tests/test_io/test_notes.py .                                            [ 64%]
tests/test_io/test_pickle.py ..                                          [ 64%]
tests/test_io/test_sbml.py .ssss............xxxx.x.x..s.............     [ 72%]
tests/test_io/test_yaml.py .x                                            [ 72%]
tests/test_io/test_web/test_load.py ..ssss.                              [ 73%]
tests/test_manipulation/test_annotate.py .                               [ 73%]
tests/test_manipulation/test_delete.py .......                           [ 75%]
tests/test_manipulation/test_modify.py ...                               [ 75%]
tests/test_manipulation/test_validate.py ..                              [ 76%]
tests/test_medium/test_boundary_types.py .........                       [ 77%]
tests/test_medium/test_minimal_medium.py ..........                      [ 79%]
tests/test_sampling/test_achr.py ......                                  [ 80%]
tests/test_sampling/test_optgp.py ......                                 [ 81%]
tests/test_sampling/test_sampling.py ..........                          [ 83%]
tests/test_summary/test_metabolite_summary.py .................          [ 86%]
tests/test_summary/test_model_summary.py ...............                 [ 89%]
tests/test_summary/test_reaction_summary.py ....................         [ 92%]
tests/test_util/test_array.py ..                                         [ 93%]
tests/test_util/test_context.py ...                                      [ 93%]
tests/test_util/test_process_pool.py ...............                     [ 96%]
tests/test_util/test_solver.py ..............s                           [ 99%]
tests/test_util/test_util.py ...x                                        [100%]

=============================== warnings summary ===============================
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_and_gpr[a AND b-2-gpr_genes2-a and b]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_and_b_strs]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists1]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists2]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists3]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a AND b'.
    warn(

.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_or_gpr[a OR b-2-gpr_genes2-a or b]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_as_symbolic_boolean[a OR b-symbolic_gpr2]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_or_b_strs]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists4]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists5]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists6]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_from_symbolic[a OR b-symbolic_gpr5]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a OR b'.
    warn(

.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_complicated_gpr[(a OR b) AND c]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_as_symbolic_boolean[(a OR b) AND c-symbolic_gpr6]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_b_c_or_and_strs]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists3]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists6]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists8]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists9]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_from_symbolic[(a OR b) AND c-symbolic_gpr9]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule '(a OR b) AND c'.
    warn(

.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_that_needs_two_replacements
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule '(591001.3.peg.1891 AND 591001.3.peg.1892 AND 591001.3.peg.1893)'.
    warn(

.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_and_b_strs]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists1]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists2]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists3]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'b AND a'.
    warn(

.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_or_b_strs]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists4]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists5]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists6]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'b OR a'.
    warn(

.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_b_c_or_strs]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists1]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists4]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists7]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists8]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a OR b or c'.
    warn(

.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_b_c_and_strs]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists2]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists5]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists7]
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists9]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a AND b and c'.
    warn(

.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_model.py::test_reaction_delete
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_model.py::test_reaction_delete
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/reaction.py:879: DeprecationWarning: delete is deprecated. Use reaction.remove_from_model instead
    warn(

.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_model.py::test_group_loss_of_elements
.pybuild/cpython3_3.11_cobra/build/tests/test_flux_analysis/test_gapfilling.py::test_gapfilling
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/group.py:147: UserWarning: need to pass in a list
    warn("need to pass in a list")

.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_model.py::test_change_objective
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_model.py::test_change_objective
.pybuild/cpython3_3.11_cobra/build/tests/test_core/test_model.py::test_change_objective
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/reaction.py:761: DeprecationWarning: Please use reaction.flux instead.
    warn("Please use reaction.flux instead.", DeprecationWarning)

.pybuild/cpython3_3.11_cobra/build/tests/test_io/test_json.py: 6 warnings
.pybuild/cpython3_3.11_cobra/build/tests/test_io/test_mat.py: 10 warnings
.pybuild/cpython3_3.11_cobra/build/tests/test_io/test_pickle.py: 2 warnings
.pybuild/cpython3_3.11_cobra/build/tests/test_io/test_sbml.py: 18 warnings
.pybuild/cpython3_3.11_cobra/build/tests/test_io/test_yaml.py: 2 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/solver.py:554: UserWarning: Solver status is 'infeasible'.
    warn(f"Solver status is '{status}'.", UserWarning)

.pybuild/cpython3_3.11_cobra/build/tests/test_medium/test_minimal_medium.py: 29 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium/minimal_medium.py:112: FutureWarning: The default dtype for empty Series will be 'object' instead of 'float64' in a future version. Specify a dtype explicitly to silence this warning.
    medium = pd.Series()

.pybuild/cpython3_3.11_cobra/build/tests/test_util/test_process_pool.py::test_with_context
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/process_pool.py:72: PytestMockWarning: Mocks returned by pytest-mock do not need to be used as context managers. The mocker fixture automatically undoes mocking at the end of a test. This warning can be ignored if it was triggered by mocking a context manager. https://pytest-mock.readthedocs.io/en/latest/remarks.html#usage-as-context-manager
    self._pool.__enter__()

.pybuild/cpython3_3.11_cobra/build/tests/test_util/test_util.py::test_show_versions
  /usr/lib/python3/dist-packages/depinfo/application/compatibility.py:26: DeprecationWarning: The function 'print_dependencies' is deprecated since version 2.0.0. Please use either the command line interface with command 'depinfo' or import 'depinfo.application.DisplayApplication' in your Python project.
    warn(

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html

------------------------------------------------------------------------------------------------------------------------------ benchmark: 31 tests ------------------------------------------------------------------------------------------------------------------------------
Name (time in us)                                                      Min                         Max                        Mean                    StdDev                      Median                       IQR            Outliers          OPS            Rounds  Iterations
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
test_subtract_metabolite_benchmark[glpk]                           77.3350 (1.0)              128.6710 (1.0)               80.9402 (1.0)              5.3756 (1.0)               79.6690 (1.0)              1.6663 (1.0)         19;32  12,354.7956 (1.0)         425           1
test_subtract_metabolite_benchmark[gurobi]                         78.0020 (1.01)             129.3370 (1.01)              81.7070 (1.01)             5.5470 (1.03)              80.6680 (1.01)             2.0000 (1.20)        18;34  12,238.8556 (0.99)        411           1
test_subtract_metabolite_benchmark[cplex]                          79.0020 (1.02)          12,195.3300 (94.78)            113.0847 (1.40)           602.6458 (112.11)            81.6690 (1.03)             1.6670 (1.00)         1;34   8,842.9270 (0.72)        404           1
test_change_objective_benchmark[optlang-glpk]                   3,522.0950 (45.54)         10,177.2760 (79.10)          3,653.8631 (45.14)          320.5238 (59.63)          3,635.4320 (45.63)           52.5848 (31.56)        1;13     273.6829 (0.02)        427           1
test_achr_sample_benchmark                                      3,614.7640 (46.74)          4,032.4430 (31.34)          3,739.8933 (46.21)           64.0688 (11.92)          3,736.1010 (46.90)           75.8350 (45.51)        23;3     267.3873 (0.02)        133           1
test_optgp_sample_benchmark                                     5,371.4790 (69.46)          5,866.8260 (45.60)          5,458.4206 (67.44)           76.8693 (14.30)          5,439.1470 (68.27)           53.0020 (31.81)       23;14     183.2032 (0.01)        154           1
test_loopless_benchmark_after                                  19,445.1930 (251.44)        20,027.8750 (155.65)        19,627.5567 (242.49)         151.7444 (28.23)         19,593.0295 (245.93)         257.0070 (154.24)        8;0      50.9488 (0.00)         26           1
test_loopless_benchmark_before                                 83,837.6020 (>1000.0)       85,059.6351 (661.06)        84,486.8864 (>1000.0)        444.9275 (82.77)         84,521.9540 (>1000.0)        518.0140 (310.89)        2;0      11.8362 (0.00)          5           1
test_minimal_medium_mip_benchmark                              95,541.9220 (>1000.0)       96,259.9410 (748.11)        95,898.1699 (>1000.0)        248.7222 (46.27)         95,960.2670 (>1000.0)        352.5092 (211.56)        3;0      10.4277 (0.00)          7           1
test_minimal_medium_linear_benchmark                           97,819.3170 (>1000.0)       99,466.0290 (773.03)        98,397.2853 (>1000.0)        623.2421 (115.94)        98,150.9930 (>1000.0)        934.6920 (560.95)        1;0      10.1629 (0.00)          7           1
test_copy_benchmark[optlang-glpk]                             256,290.9370 (>1000.0)      271,399.0130 (>1000.0)      262,391.1020 (>1000.0)      7,258.0632 (>1000.0)      258,766.0040 (>1000.0)     13,202.2735 (>1000.0)       1;0       3.8111 (0.00)          5           1
test_single_reaction_deletion_benchmark[glpk]                 323,266.0810 (>1000.0)      325,403.8060 (>1000.0)      324,152.1722 (>1000.0)        777.8825 (144.71)       324,073.7710 (>1000.0)        689.1855 (413.61)        2;0       3.0850 (0.00)          5           1
test_deepcopy_benchmark                                       391,697.2680 (>1000.0)      411,781.1450 (>1000.0)      403,877.6646 (>1000.0)      8,086.6413 (>1000.0)      407,602.0319 (>1000.0)     11,448.6433 (>1000.0)       1;0       2.4760 (0.00)          5           1
test_single_gene_deletion_fba_benchmark[glpk]                 431,947.6900 (>1000.0)      503,596.2960 (>1000.0)      461,568.4918 (>1000.0)     30,693.6035 (>1000.0)      455,988.6740 (>1000.0)     52,610.8407 (>1000.0)       1;0       2.1665 (0.00)          5           1
test_gpr_equality_benchmark                                   455,066.3170 (>1000.0)      467,699.3260 (>1000.0)      458,501.0770 (>1000.0)      5,420.6206 (>1000.0)      455,508.6630 (>1000.0)      6,220.0860 (>1000.0)       1;0       2.1810 (0.00)          5           1
test_fastcc_benchmark[glpk]                                   928,552.7960 (>1000.0)    1,845,255.2710 (>1000.0)    1,118,840.6122 (>1000.0)    406,206.7501 (>1000.0)      933,380.9270 (>1000.0)    245,911.3220 (>1000.0)       1;1       0.8938 (0.00)          5           1
test_add_metabolite_benchmark[gurobi]                       1,229,316.6110 (>1000.0)    1,236,904.4830 (>1000.0)    1,232,013.8172 (>1000.0)      3,118.8851 (580.19)     1,231,226.9960 (>1000.0)      4,518.2885 (>1000.0)       1;0       0.8117 (0.00)          5           1
test_add_metabolite_benchmark[glpk]                         1,235,449.1110 (>1000.0)    1,244,877.3660 (>1000.0)    1,239,377.9504 (>1000.0)      3,889.3292 (723.51)     1,238,581.5290 (>1000.0)      6,310.6708 (>1000.0)       2;0       0.8069 (0.00)          5           1
test_add_metabolite_benchmark[cplex]                        1,245,519.7170 (>1000.0)    1,250,027.8380 (>1000.0)    1,247,481.5028 (>1000.0)      1,673.9955 (311.40)     1,247,127.7600 (>1000.0)      2,030.0549 (>1000.0)       2;0       0.8016 (0.00)          5           1
test_optgp_init_benchmark                                   1,394,236.1100 (>1000.0)    1,420,359.8180 (>1000.0)    1,408,362.6264 (>1000.0)      9,335.8912 (>1000.0)    1,409,821.5330 (>1000.0)      8,302.9753 (>1000.0)       2;0       0.7100 (0.00)          5           1
test_achr_init_benchmark                                    1,401,184.6330 (>1000.0)    1,435,760.9040 (>1000.0)    1,415,897.0320 (>1000.0)     13,445.3270 (>1000.0)    1,411,116.9020 (>1000.0)     18,659.3389 (>1000.0)       2;0       0.7063 (0.00)          5           1
test_single_gene_deletion_linear_moma_benchmark[glpk]       2,907,392.3530 (>1000.0)    5,891,156.7710 (>1000.0)    3,509,612.7176 (>1000.0)  1,331,329.5924 (>1000.0)    2,916,927.9441 (>1000.0)    747,146.1370 (>1000.0)       1;1       0.2849 (0.00)          5           1
test_gpr_symbolism_benchmark                                3,449,804.3780 (>1000.0)    3,481,123.8920 (>1000.0)    3,464,481.0416 (>1000.0)     11,513.0367 (>1000.0)    3,464,360.7720 (>1000.0)     14,202.0510 (>1000.0)       2;0       0.2886 (0.00)          5           1
test_flux_variability_loopless_benchmark[glpk]              4,003,195.7160 (>1000.0)    4,298,120.0320 (>1000.0)    4,091,256.4326 (>1000.0)    118,364.4680 (>1000.0)    4,058,662.2170 (>1000.0)    102,092.5960 (>1000.0)       1;1       0.2444 (0.00)          5           1
test_double_gene_deletion_benchmark                         4,115,222.0590 (>1000.0)    4,450,179.1260 (>1000.0)    4,269,907.9120 (>1000.0)    127,471.0257 (>1000.0)    4,264,802.7730 (>1000.0)    180,569.1388 (>1000.0)       2;0       0.2342 (0.00)          5           1
test_single_gene_deletion_linear_room_benchmark[glpk]       4,236,898.9980 (>1000.0)    4,267,659.1630 (>1000.0)    4,253,726.7864 (>1000.0)     11,392.6037 (>1000.0)    4,254,189.7980 (>1000.0)     14,288.9695 (>1000.0)       2;0       0.2351 (0.00)          5           1
test_pfba_benchmark[glpk]                                   4,535,572.7350 (>1000.0)    4,544,177.6340 (>1000.0)    4,539,716.6466 (>1000.0)      4,140.6284 (770.26)     4,537,734.7930 (>1000.0)      7,579.6205 (>1000.0)       3;0       0.2203 (0.00)          5           1
test_copy_benchmark_large_model[optlang-glpk]               5,398,585.1130 (>1000.0)    7,568,811.5210 (>1000.0)    6,247,154.2152 (>1000.0)  1,039,248.8359 (>1000.0)    5,703,761.7080 (>1000.0)  1,865,433.4040 (>1000.0)       1;0       0.1601 (0.00)          5           1
test_geometric_fba_benchmark[glpk]                          6,199,889.1170 (>1000.0)    6,254,065.5820 (>1000.0)    6,215,717.4106 (>1000.0)     23,331.1701 (>1000.0)    6,201,660.4960 (>1000.0)     29,377.7923 (>1000.0)       1;0       0.1609 (0.00)          5           1
test_double_reaction_deletion_benchmark                    26,606,108.7680 (>1000.0)   27,029,734.8840 (>1000.0)   26,732,975.5352 (>1000.0)    169,016.2758 (>1000.0)   26,683,455.1630 (>1000.0)    127,323.3707 (>1000.0)       1;1       0.0374 (0.00)          5           1
test_flux_variability_benchmark[glpk]                     168,307,358.7810 (>1000.0)  169,752,512.0480 (>1000.0)  168,650,039.2136 (>1000.0)    617,943.7314 (>1000.0)  168,390,203.6870 (>1000.0)    409,295.9548 (>1000.0)       1;1       0.0059 (0.00)          5           1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Legend:
  Outliers: 1 Standard Deviation from Mean; 1.5 IQR (InterQuartile Range) from 1st Quartile and 3rd Quartile.
  OPS: Operations Per Second, computed as 1 / Mean
==== 508 passed, 31 skipped, 11 xfailed, 119 warnings in 2490.73s (0:41:30) ====
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=pybuild
   dh_prep -a -O--buildsystem=pybuild
   dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:291: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-cobra 
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
running build
running build_py
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-cobra
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/exceptions.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/configuration.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/dictlist.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/formula.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/gene.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/group.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/metabolite.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/model.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/object.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/reaction.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/singleton.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/solution.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/species.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/configuration.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/singleton.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/dictlist.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/object.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/gene.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/species.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/metabolite.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/formula.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/model.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/group.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/reaction.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/core/__pycache__/solution.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data/iJO1366.xml.gz -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini.json -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini.mat -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini.yml -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data/mini_cobra.xml -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data/salmonella.xml.gz -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data/textbook.xml.gz -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/data/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/deletion.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/fastcc.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/gapfilling.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/geometric.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/helpers.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/loopless.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/moma.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/parsimonious.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/phenotype_phase_plane.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/reaction.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/room.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/variability.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/deletion.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/moma.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/parsimonious.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/room.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/fastcc.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/helpers.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/gapfilling.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/geometric.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/variability.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/loopless.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/phenotype_phase_plane.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/flux_analysis/__pycache__/reaction.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/dict.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/json.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/mat.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/yaml.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/sbml.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/abstract_model_repository.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/bigg_models_repository.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/biomodels_repository.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/cobrapy_repository.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/load.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/abstract_model_repository.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/bigg_models_repository.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/biomodels_repository.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/load.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/web/__pycache__/cobrapy_repository.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/schema_v1.json -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/dict.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/json.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/mat.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/sbml.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/io/__pycache__/yaml.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/annotate.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/delete.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/modify.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/validate.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/annotate.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/delete.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/modify.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/manipulation/__pycache__/validate.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium/annotations.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium/boundary_types.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium/minimal_medium.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/boundary_types.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/annotations.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/medium/__pycache__/minimal_medium.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/achr.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/core.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/hr_sampler.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/optgp.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/sampling.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/hr_sampler.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/achr.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/core.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/optgp.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/sampling/__pycache__/sampling.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary/metabolite_summary.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary/model_summary.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary/reaction_summary.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary/summary.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/summary.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/metabolite_summary.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/reaction_summary.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/summary/__pycache__/model_summary.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/array.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/context.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/process_pool.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/solver.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/util.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/array.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/context.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/solver.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/util.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/util/__pycache__/process_pool.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_cobra/build/cobra/__pycache__/exceptions.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/.benchmarks
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/exceptions.py to exceptions.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/configuration.py to configuration.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/dictlist.py to dictlist.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/formula.py to formula.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/gene.py to gene.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/group.py to group.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/metabolite.py to metabolite.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/model.py to model.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/object.py to object.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/reaction.py to reaction.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/singleton.py to singleton.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/solution.py to solution.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/core/species.py to species.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/data/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/deletion.py to deletion.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/fastcc.py to fastcc.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/gapfilling.py to gapfilling.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/geometric.py to geometric.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/helpers.py to helpers.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/loopless.py to loopless.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/moma.py to moma.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/parsimonious.py to parsimonious.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/phenotype_phase_plane.py to phenotype_phase_plane.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/reaction.py to reaction.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/room.py to room.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/flux_analysis/variability.py to variability.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/dict.py to dict.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/json.py to json.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/mat.py to mat.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/yaml.py to yaml.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/sbml.py to sbml.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/abstract_model_repository.py to abstract_model_repository.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/bigg_models_repository.py to bigg_models_repository.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/biomodels_repository.py to biomodels_repository.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/cobrapy_repository.py to cobrapy_repository.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/io/web/load.py to load.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/annotate.py to annotate.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/delete.py to delete.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/modify.py to modify.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/manipulation/validate.py to validate.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/annotations.py to annotations.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/boundary_types.py to boundary_types.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/medium/minimal_medium.py to minimal_medium.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/achr.py to achr.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/core.py to core.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/hr_sampler.py to hr_sampler.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/optgp.py to optgp.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/sampling/sampling.py to sampling.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/metabolite_summary.py to metabolite_summary.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/model_summary.py to model_summary.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/reaction_summary.py to reaction_summary.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/summary/summary.py to summary.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/array.py to array.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/context.py to context.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/process_pool.py to process_pool.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/solver.py to solver.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra/util/util.py to util.cpython-311.pyc
running install_egg_info
running egg_info
creating src/cobra.egg-info
writing src/cobra.egg-info/PKG-INFO
writing dependency_links to src/cobra.egg-info/dependency_links.txt
writing requirements to src/cobra.egg-info/requires.txt
writing top-level names to src/cobra.egg-info/top_level.txt
writing manifest file 'src/cobra.egg-info/SOURCES.txt'
reading manifest file 'src/cobra.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE'
writing manifest file 'src/cobra.egg-info/SOURCES.txt'
Copying src/cobra.egg-info to /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.11/dist-packages/cobra-0.26.3.egg-info
Skipping SOURCES.txt
running install_scripts
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install -X update_pickles.py --package=python-cobra-data
dh_install: warning: All requested packages have been excluded (e.g. via a Build-Profile or due to architecture restrictions).
dh_install --remaining-packages
find debian -name __pycache__ | xargs rm -rf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--buildsystem=pybuild
   dh_installchangelogs -a -O--buildsystem=pybuild
   dh_python3 -a -O--buildsystem=pybuild
I: dh_python3 pydist:302: Cannot find package that provides python_libsbml. Please add package that provides it to Build-Depends or add "python_libsbml python3-libsbml" line to debian/py3dist-overrides or add proper dependency to Depends by hand and ignore this info.
   dh_installsystemduser -a -O--buildsystem=pybuild
   dh_lintian -a -O--buildsystem=pybuild
   dh_perl -a -O--buildsystem=pybuild
   dh_link -a -O--buildsystem=pybuild
   dh_strip_nondeterminism -a -O--buildsystem=pybuild
   dh_compress -a -O--buildsystem=pybuild
   dh_fixperms -a -O--buildsystem=pybuild
   dh_missing -a -O--buildsystem=pybuild
   dh_dwz -a -O--buildsystem=pybuild
   dh_strip -a -O--buildsystem=pybuild
   dh_makeshlibs -a -O--buildsystem=pybuild
   dh_shlibdeps -a -O--buildsystem=pybuild
   dh_installdeb -a -O--buildsystem=pybuild
   dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: Depends field of package python3-cobra: substitution variable ${shlibs:Depends} used, but is not defined
   dh_md5sums -a -O--buildsystem=pybuild
   dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'python3-cobra' in '../python3-cobra_0.26.3-2_armhf.deb'.
 dpkg-genbuildinfo --build=any -O../python-cobra_0.26.3-2_armhf.buildinfo
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> -O../python-cobra_0.26.3-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-09-23T10:28:30Z

Finished
--------

I: Built successfully

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| Post Build Chroot                                                            |
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| Changes                                                                      |
+------------------------------------------------------------------------------+


python-cobra_0.26.3-2_armhf.changes:
------------------------------------

Format: 1.8
Date: Wed, 20 Sep 2023 19:50:59 +0530
Source: python-cobra
Binary: python3-cobra
Architecture: armhf
Version: 0.26.3-2
Distribution: trixie-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Nilesh Patra <nilesh@debian.org>
Description:
 python3-cobra - constraint-based modeling of biological networks with Python 3
Changes:
 python-cobra (0.26.3-2) unstable; urgency=medium
 .
   * Team Upload.
   * Add patch to skip a test on 32-bit
Checksums-Sha1:
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Checksums-Sha256:
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Files:
 2919d8ec872d249745e4bbc01094dd43 10327 python optional python-cobra_0.26.3-2_armhf.buildinfo
 d5a4cb3c986c738a13adc1ea39307a9e 1118668 python optional python3-cobra_0.26.3-2_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


python3-cobra_0.26.3-2_armhf.deb
--------------------------------

 new Debian package, version 2.0.
 size 1118668 bytes: control archive=3536 bytes.
    1233 bytes,    19 lines      control              
    7584 bytes,    84 lines      md5sums              
     273 bytes,    12 lines   *  postinst             #!/bin/sh
     386 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: python3-cobra
 Source: python-cobra
 Version: 0.26.3-2
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1873
 Depends: python3-appdirs (>= 1.4), python3-appdirs (<< 2), python3-depinfo, python3-diskcache, python3-future, python3-httpx, python3-importlib-resources, python3-numpy, python3-optlang (>= 1.7.0-1~), python3-pandas, python3-pydantic, python3-rich, python3-ruamel.yaml, python3-swiglpk (>= 5.0.8-1~), python3:any, python-cobra-data (= 0.26.3-2), python3-simplejson, python3-tabulate, python3-sbml5
 Suggests: python3-matplotlib, qsopt-ex
 Section: python
 Priority: optional
 Homepage: https://opencobra.github.io/cobrapy/
 Description: constraint-based modeling of biological networks with Python 3
  COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely
  used for genome-scale modeling of metabolic networks in both prokaryotes
  and eukaryotes. COBRApy is a constraint-based modeling package that is
  designed to accommodate the biological complexity of the next generation
  of COBRA models and provides access to commonly used COBRA methods, such
  as flux balance analysis, flux variability analysis, and gene deletion
  analyses.

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drwxr-xr-x root/root         0 2023-09-20 14:20 ./usr/lib/python3/dist-packages/cobra/flux_analysis/
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lrwxrwxrwx root/root         0 2023-09-20 14:20 ./usr/lib/python3/dist-packages/cobra/test/data -> ../../../../../share/python-cobra/data
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-rw-r--r-- root/root      2078 2023-09-20 13:26 ./usr/share/doc/python3-cobra/copyright
drwxr-xr-x root/root         0 2023-09-20 14:20 ./usr/share/lintian/
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-rw-r--r-- root/root       146 2023-09-20 13:26 ./usr/share/lintian/overrides/python3-cobra


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 19472
Build-Time: 2580
Distribution: trixie-staging
Host Architecture: armhf
Install-Time: 1934
Job: python-cobra_0.26.3-2
Machine Architecture: armhf
Package: python-cobra
Package-Time: 4571
Source-Version: 0.26.3-2
Space: 19472
Status: successful
Version: 0.26.3-2
--------------------------------------------------------------------------------
Finished at 2023-09-23T10:28:30Z
Build needed 01:16:11, 19472k disc space

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