Raspbian Package Auto-Building

python-cobra → 0.26.0-3 → armhf → 2023-01-04 07:23:22

sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01

+==============================================================================+
| python-cobra 0.26.0-3 (armhf)                Wed, 04 Jan 2023 06:52:11 +0000 |
+==============================================================================+

Package: python-cobra
Version: 0.26.0-3
Source Version: 0.26.0-3
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-996bee85-a7aa-4b8d-85f9-0e53830d6db9' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.5 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.3 MB]
Fetched 27.9 MB in 10s (2846 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'python-cobra' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-cobra.git
Please use:
git clone https://salsa.debian.org/med-team/python-cobra.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 3758 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main python-cobra 0.26.0-3 (dsc) [3103 B]
Get:2 http://172.17.4.1/private bookworm-staging/main python-cobra 0.26.0-3 (tar) [3745 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main python-cobra 0.26.0-3 (diff) [9864 B]
Fetched 3758 kB in 0s (9474 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/python-cobra-fAkHZi/python-cobra-0.26.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-cobra-fAkHZi' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-EjzEH7/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-EjzEH7/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-EjzEH7/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ Packages [433 B]
Fetched 2109 B in 0s (9276 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libpam-cap netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (69.0 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12958 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any-amd64 any-i386 arm64 armel armhf mips mips64el mipsel ppc64el alpha hppa m68k powerpc powerpcspe ppc64 sh4 sparc64 all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-python, libglpk-dev, python3-dev, python3-setuptools, python3-depinfo, python3-future, python3-importlib-resources, python3-numpy, python3-optlang, python3-ruamel.yaml, python3-pandas, python3-pip, python3-pipdeptree, python3-requests, python3-swiglpk (>= 4.65.1), python3-tabulate, python3-sbml5, python3-simplejson, cython3, python3-pytest, python3-pytest-benchmark, python3-pytest-mock, python3-jsonschema, libsbml5, python3-matplotlib, python3-appdirs, python3-diskcache, python3-httpx, python3-pydantic, python3-rich
Filtered Build-Depends: debhelper-compat (= 13), dh-python, libglpk-dev, python3-dev, python3-setuptools, python3-depinfo, python3-future, python3-importlib-resources, python3-numpy, python3-optlang, python3-ruamel.yaml, python3-pandas, python3-pip, python3-pipdeptree, python3-requests, python3-swiglpk (>= 4.65.1), python3-tabulate, python3-sbml5, python3-simplejson, cython3, python3-pytest, python3-pytest-benchmark, python3-pytest-mock, python3-jsonschema, libsbml5, python3-matplotlib, python3-appdirs, python3-diskcache, python3-httpx, python3-pydantic, python3-rich
dpkg-deb: building package 'sbuild-build-depends-python-cobra-dummy' in '/<<BUILDDIR>>/resolver-EjzEH7/apt_archive/sbuild-build-depends-python-cobra-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-python-cobra-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ Sources [720 B]
Get:5 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ Packages [784 B]
Fetched 2837 B in 0s (13.6 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install python-cobra build dependencies (apt-based resolver)
------------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev blt bsdextrautils ca-certificates
  cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file
  fontconfig-config fonts-dejavu-core fonts-lyx gettext gettext-base
  groff-base intltool-debian libamd2 libarchive-zip-perl libblas-dev libblas3
  libbrotli1 libbsd0 libbtf1 libcamd2 libccolamd2 libcholmod3 libcolamd2
  libcxsparse3 libdebhelper-perl libdeflate0 libelf1 libexpat1 libexpat1-dev
  libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
  libgfortran5 libglib2.0-0 libglpk-dev libglpk40 libgmp-dev libgmpxx4ldbl
  libgraphite2-3 libharfbuzz0b libicu72 libimagequant0 libjbig0
  libjpeg62-turbo libjs-jquery libjs-jquery-ui libjs-sphinxdoc
  libjs-underscore libklu1 liblapack-dev liblapack3 liblbfgsb0 liblcms2-2
  libldl2 liblerc4 libltdl7 libmagic-mgc libmagic1 libmd0 libmetis5
  libmongoose2 libmpdec3 libopenjp2-7 libpipeline1 libpng16-16 libpython3-dev
  libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal
  libpython3.10-stdlib libpython3.11-minimal libpython3.11-stdlib
  libqhull-r8.0 libraqm0 librbio2 libsbml5 libsliplu1 libspqr2
  libsub-override-perl libsuitesparse-dev libsuitesparseconfig5 libtcl8.6
  libtiff5 libtk8.6 libtool libuchardet0 libumfpack5 libwebp7 libwebpdemux2
  libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2
  libxml2 libxrender1 libxslt1.1 libxss1 m4 man-db media-types openssl
  po-debconf python-matplotlib-data python3 python3-anyio python3-appdirs
  python3-attr python3-brotli python3-certifi python3-chardet
  python3-charset-normalizer python3-click python3-colorama python3-commonmark
  python3-cpuinfo python3-cycler python3-dateutil python3-decorator
  python3-depinfo python3-dev python3-diskcache python3-distutils
  python3-fonttools python3-fs python3-future python3-h11 python3-httpcore
  python3-httpx python3-idna python3-importlib-resources python3-iniconfig
  python3-jsonschema python3-kiwisolver python3-lib2to3 python3-lxml
  python3-lz4 python3-matplotlib python3-minimal python3-more-itertools
  python3-mpmath python3-numpy python3-optlang python3-packaging
  python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk
  python3-pip python3-pipdeptree python3-pkg-resources python3-pluggy
  python3-py python3-pydantic python3-pygments python3-pyparsing
  python3-pyrsistent python3-pytest python3-pytest-benchmark
  python3-pytest-mock python3-requests python3-rfc3986 python3-rich
  python3-ruamel.yaml python3-ruamel.yaml.clib python3-sbml5 python3-scipy
  python3-setuptools python3-simplejson python3-six python3-sniffio
  python3-swiglpk python3-sympy python3-tabulate python3-tk python3-tomli
  python3-typing-extensions python3-tz python3-ufolib2 python3-unicodedata2
  python3-urllib3 python3-wheel python3-zipp python3.10 python3.10-dev
  python3.10-minimal python3.11 python3.11-minimal swig swig4.0 tk8.6-blt2.5
  ucf unicode-data x11-common zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc blt-demo cython-doc dh-make flit
  python3-build python3-installer gettext-doc libasprintf-dev libgettextpo-dev
  groff liblapack-doc low-memory-monitor libiodbc2-dev
  default-libmysqlclient-dev gmp-doc libgmp10-doc libmpfr-dev
  libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 libtool-doc gfortran
  | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
  libmail-box-perl python3-doc python3-venv python-attr-doc python-cycler-doc
  python-future-doc python-jsonschema-doc python-lxml-doc cm-super-minimal
  dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3
  librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi
  python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado
  texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2
  gfortran python-numpy-doc python-pandas-doc python3-statsmodels
  python-pil-doc subversion python-pygments-doc ttf-bitstream-vera
  python-pyparsing-doc python-pytest-mock-doc python3-mock
  python3-cryptography python3-openssl python3-socks python-requests-doc
  python-scipy-doc python-setuptools-doc texlive-fonts-extra python-sympy-doc
  tix python3-tk-dbg python3.10-venv python3.10-doc binfmt-support
  python3.11-venv python3.11-doc swig-doc swig-examples swig4.0-examples
  swig4.0-doc
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
  xdg-user-dirs javascript-common libgraphblas-dev libltdl-dev
  libmail-sendmail-perl python3-json-pointer python3-rfc3987
  python3-uritemplate python3-webcolors python3-bs4 python3-html5lib
  python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-xlwt
  python3-tables python3-jinja2 python3-olefile python3-graphviz
  python3-elasticsearch python3-freezegun python3-pygal isympy-common
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev blt bsdextrautils ca-certificates
  cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file
  fontconfig-config fonts-dejavu-core fonts-lyx gettext gettext-base
  groff-base intltool-debian libamd2 libarchive-zip-perl libblas-dev libblas3
  libbrotli1 libbsd0 libbtf1 libcamd2 libccolamd2 libcholmod3 libcolamd2
  libcxsparse3 libdebhelper-perl libdeflate0 libelf1 libexpat1 libexpat1-dev
  libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
  libgfortran5 libglib2.0-0 libglpk-dev libglpk40 libgmp-dev libgmpxx4ldbl
  libgraphite2-3 libharfbuzz0b libicu72 libimagequant0 libjbig0
  libjpeg62-turbo libjs-jquery libjs-jquery-ui libjs-sphinxdoc
  libjs-underscore libklu1 liblapack-dev liblapack3 liblbfgsb0 liblcms2-2
  libldl2 liblerc4 libltdl7 libmagic-mgc libmagic1 libmd0 libmetis5
  libmongoose2 libmpdec3 libopenjp2-7 libpipeline1 libpng16-16 libpython3-dev
  libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal
  libpython3.10-stdlib libpython3.11-minimal libpython3.11-stdlib
  libqhull-r8.0 libraqm0 librbio2 libsbml5 libsliplu1 libspqr2
  libsub-override-perl libsuitesparse-dev libsuitesparseconfig5 libtcl8.6
  libtiff5 libtk8.6 libtool libuchardet0 libumfpack5 libwebp7 libwebpdemux2
  libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2
  libxml2 libxrender1 libxslt1.1 libxss1 m4 man-db media-types openssl
  po-debconf python-matplotlib-data python3 python3-anyio python3-appdirs
  python3-attr python3-brotli python3-certifi python3-chardet
  python3-charset-normalizer python3-click python3-colorama python3-commonmark
  python3-cpuinfo python3-cycler python3-dateutil python3-decorator
  python3-depinfo python3-dev python3-diskcache python3-distutils
  python3-fonttools python3-fs python3-future python3-h11 python3-httpcore
  python3-httpx python3-idna python3-importlib-resources python3-iniconfig
  python3-jsonschema python3-kiwisolver python3-lib2to3 python3-lxml
  python3-lz4 python3-matplotlib python3-minimal python3-more-itertools
  python3-mpmath python3-numpy python3-optlang python3-packaging
  python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk
  python3-pip python3-pipdeptree python3-pkg-resources python3-pluggy
  python3-py python3-pydantic python3-pygments python3-pyparsing
  python3-pyrsistent python3-pytest python3-pytest-benchmark
  python3-pytest-mock python3-requests python3-rfc3986 python3-rich
  python3-ruamel.yaml python3-ruamel.yaml.clib python3-sbml5 python3-scipy
  python3-setuptools python3-simplejson python3-six python3-sniffio
  python3-swiglpk python3-sympy python3-tabulate python3-tk python3-tomli
  python3-typing-extensions python3-tz python3-ufolib2 python3-unicodedata2
  python3-urllib3 python3-wheel python3-zipp python3.10 python3.10-dev
  python3.10-minimal python3.11 python3.11-minimal
  sbuild-build-depends-python-cobra-dummy swig swig4.0 tk8.6-blt2.5 ucf
  unicode-data x11-common zlib1g-dev
0 upgraded, 210 newly installed, 0 to remove and 30 not upgraded.
Need to get 119 MB of archives.
After this operation, 533 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-EjzEH7/apt_archive ./ sbuild-build-depends-python-cobra-dummy 0.invalid.0 [1068 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.9-1 [769 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.9-1 [1477 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.10.6-3 [25.5 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf media-types all 8.0.0 [33.4 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.9-1 [1597 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf python3.10 armhf 3.10.9-1 [509 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.10.6-3 [8588 B]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.10.6-3 [25.2 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11-minimal armhf 3.11.1-2 [796 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf python3.11-minimal armhf 3.11.1-2 [1678 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-9 [774 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-4 [78.8 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.1-1 [1341 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf openssl armhf 3.0.7-1 [1349 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates all 20211016 [156 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-4 [295 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-4 [120 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-4 [65.8 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-10 [156 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-1 [260 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-10 [495 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf libtcl8.6 armhf 8.6.13+dfsg-1 [906 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b2 [260 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libpng16-16 armhf 1.6.39-2 [258 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf libfreetype6 armhf 2.12.1+dfsg-3 [352 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf fontconfig-config armhf 2.13.1-4.5 [281 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf libfontconfig1 armhf 2.13.1-4.5 [330 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf libmd0 armhf 1.0.4-2 [28.6 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf libbsd0 armhf 0.11.7-1 [112 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf libx11-data all 2:1.8.3-3 [292 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf libx11-6 armhf 2:1.8.3-3 [687 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf libxft2 armhf 2.3.6-1 [53.7 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf libtk8.6 armhf 8.6.13-1 [680 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-4.1 [477 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf blt armhf 2.5.3+dfsg-4.1 [14.9 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf cython3 armhf 0.29.32-2 [1218 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.11.3 [81.1 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-5 [517 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-2 [19.4 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-2 [8556 B]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1 [570 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-10 [1203 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.11.3 [942 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf python3-lib2to3 all 3.10.8-1 [77.3 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf python3-distutils all 3.10.8-1 [139 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf dh-python all 5.20220819+rpi1 [114 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf fonts-lyx all 2.3.6.1-1 [206 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf libsuitesparseconfig5 armhf 1:5.12.0+dfsg-2 [23.6 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf libamd2 armhf 1:5.12.0+dfsg-2 [30.2 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf libblas3 armhf 3.11.0-2 [100.0 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf libblas-dev armhf 3.11.0-2 [106 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf libbtf1 armhf 1:5.12.0+dfsg-2 [24.1 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf libcamd2 armhf 1:5.12.0+dfsg-2 [30.7 kB]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf libccolamd2 armhf 1:5.12.0+dfsg-2 [31.7 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf libcolamd2 armhf 1:5.12.0+dfsg-2 [28.3 kB]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf libgfortran5 armhf 12.2.0-10+rpi1 [238 kB]
Get:82 http://172.17.4.1/private bookworm-staging/main armhf liblapack3 armhf 3.11.0-2 [1624 kB]
Get:83 http://172.17.4.1/private bookworm-staging/main armhf libmetis5 armhf 5.1.0.dfsg-7 [133 kB]
Get:84 http://172.17.4.1/private bookworm-staging/main armhf libcholmod3 armhf 1:5.12.0+dfsg-2 [212 kB]
Get:85 http://172.17.4.1/private bookworm-staging/main armhf libcxsparse3 armhf 1:5.12.0+dfsg-2 [52.1 kB]
Get:86 http://172.17.4.1/private bookworm-staging/main armhf libdeflate0 armhf 1.14-1 [50.9 kB]
Get:87 http://172.17.4.1/private bookworm-staging/main armhf libexpat1-dev armhf 2.5.0-1 [130 kB]
Get:88 http://172.17.4.1/private bookworm-staging/main armhf libfribidi0 armhf 1.0.8-2.1 [63.7 kB]
Get:89 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-0 armhf 2.74.1-2 [1214 kB]
Get:90 http://172.17.4.1/private bookworm-staging/main armhf libltdl7 armhf 2.4.7-5 [390 kB]
Get:91 http://172.17.4.1/private bookworm-staging/main armhf libglpk40 armhf 5.0-1 [327 kB]
Get:92 http://172.17.4.1/private bookworm-staging/main armhf libgmpxx4ldbl armhf 2:6.2.1+dfsg1-1.1 [338 kB]
Get:93 http://172.17.4.1/private bookworm-staging/main armhf libgmp-dev armhf 2:6.2.1+dfsg1-1.1 [582 kB]
Get:94 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-1 [901 kB]
Get:95 http://172.17.4.1/private bookworm-staging/main armhf libklu1 armhf 1:5.12.0+dfsg-2 [51.8 kB]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf libldl2 armhf 1:5.12.0+dfsg-2 [23.8 kB]
Get:97 http://172.17.4.1/private bookworm-staging/main armhf libmongoose2 armhf 1:5.12.0+dfsg-2 [43.8 kB]
Get:98 http://172.17.4.1/private bookworm-staging/main armhf libumfpack5 armhf 1:5.12.0+dfsg-2 [128 kB]
Get:99 http://172.17.4.1/private bookworm-staging/main armhf librbio2 armhf 1:5.12.0+dfsg-2 [32.9 kB]
Get:100 http://172.17.4.1/private bookworm-staging/main armhf libspqr2 armhf 1:5.12.0+dfsg-2 [68.2 kB]
Get:101 http://172.17.4.1/private bookworm-staging/main armhf libsliplu1 armhf 1:5.12.0+dfsg-2 [49.5 kB]
Get:102 http://172.17.4.1/private bookworm-staging/main armhf liblapack-dev armhf 3.11.0-2 [3007 kB]
Get:103 http://172.17.4.1/private bookworm-staging/main armhf libsuitesparse-dev armhf 1:5.12.0+dfsg-2 [614 kB]
Get:104 http://172.17.4.1/private bookworm-staging/main armhf libglpk-dev armhf 5.0-1 [369 kB]
Get:105 http://172.17.4.1/private bookworm-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:106 http://172.17.4.1/private bookworm-staging/main armhf libharfbuzz0b armhf 6.0.0-1 [1886 kB]
Get:107 http://172.17.4.1/private bookworm-staging/main armhf libimagequant0 armhf 2.17.0-1 [28.0 kB]
Get:108 http://172.17.4.1/private bookworm-staging/main armhf libjbig0 armhf 2.1-6.1 [27.0 kB]
Get:109 http://172.17.4.1/private bookworm-staging/main armhf libjpeg62-turbo armhf 1:2.1.2-1 [144 kB]
Get:110 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:111 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get:112 http://172.17.4.1/private bookworm-staging/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-2 [116 kB]
Get:113 http://172.17.4.1/private bookworm-staging/main armhf libjs-sphinxdoc all 5.3.0-2 [130 kB]
Get:114 http://172.17.4.1/private bookworm-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.3-11 [24.3 kB]
Get:115 http://172.17.4.1/private bookworm-staging/main armhf liblcms2-2 armhf 2.13.1-1 [125 kB]
Get:116 http://172.17.4.1/private bookworm-staging/main armhf liblerc4 armhf 4.0.0+ds-2 [133 kB]
Get:117 http://172.17.4.1/private bookworm-staging/main armhf libopenjp2-7 armhf 2.5.0-1 [165 kB]
Get:118 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10 armhf 3.10.9-1 [1462 kB]
Get:119 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-dev armhf 3.10.9-1 [2926 kB]
Get:120 http://172.17.4.1/private bookworm-staging/main armhf libpython3-dev armhf 3.10.6-3 [8820 B]
Get:121 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11-stdlib armhf 3.11.1-2 [1622 kB]
Get:122 http://172.17.4.1/private bookworm-staging/main armhf libqhull-r8.0 armhf 2020.2-5 [221 kB]
Get:123 http://172.17.4.1/private bookworm-staging/main armhf libraqm0 armhf 0.7.0-4 [9388 B]
Get:124 http://172.17.4.1/private bookworm-staging/main armhf libsbml5 armhf 5.19.0+dfsg-3+b1 [1662 kB]
Get:125 http://172.17.4.1/private bookworm-staging/main armhf libwebp7 armhf 1.2.2-2+b1 [237 kB]
Get:126 http://172.17.4.1/private bookworm-staging/main armhf libtiff5 armhf 4.4.0-6 [278 kB]
Get:127 http://172.17.4.1/private bookworm-staging/main armhf libwebpdemux2 armhf 1.2.2-2+b1 [95.5 kB]
Get:128 http://172.17.4.1/private bookworm-staging/main armhf libwebpmux3 armhf 1.2.2-2+b1 [103 kB]
Get:129 http://172.17.4.1/private bookworm-staging/main armhf libxslt1.1 armhf 1.1.35-1 [221 kB]
Get:130 http://172.17.4.1/private bookworm-staging/main armhf python-matplotlib-data all 3.6.2-3 [2736 kB]
Get:131 http://172.17.4.1/private bookworm-staging/main armhf python3-idna all 3.3-1 [39.4 kB]
Get:132 http://172.17.4.1/private bookworm-staging/main armhf python3-sniffio all 1.2.0-1 [6372 B]
Get:133 http://172.17.4.1/private bookworm-staging/main armhf python3-typing-extensions all 4.3.0-2 [43.2 kB]
Get:134 http://172.17.4.1/private bookworm-staging/main armhf python3-anyio all 3.6.2-1 [54.0 kB]
Get:135 http://172.17.4.1/private bookworm-staging/main armhf python3-appdirs all 1.4.4-3 [13.0 kB]
Get:136 http://172.17.4.1/private bookworm-staging/main armhf python3-attr all 22.2.0-1 [65.4 kB]
Get:137 http://172.17.4.1/private bookworm-staging/main armhf python3-brotli armhf 1.0.9-2+b2 [278 kB]
Get:138 http://172.17.4.1/private bookworm-staging/main armhf python3-certifi all 2022.9.24-1 [153 kB]
Get:139 http://172.17.4.1/private bookworm-staging/main armhf python3-pkg-resources all 65.5.0-1.1 [278 kB]
Get:140 http://172.17.4.1/private bookworm-staging/main armhf python3-chardet all 5.1.0+dfsg-2 [110 kB]
Get:141 http://172.17.4.1/private bookworm-staging/main armhf python3-charset-normalizer all 3.0.1-2 [49.3 kB]
Get:142 http://172.17.4.1/private bookworm-staging/main armhf python3-colorama all 0.4.6-2 [36.8 kB]
Get:143 http://172.17.4.1/private bookworm-staging/main armhf python3-click all 8.1.3-1 [92.1 kB]
Get:144 http://172.17.4.1/private bookworm-staging/main armhf python3-commonmark all 0.9.1-4 [45.1 kB]
Get:145 http://172.17.4.1/private bookworm-staging/main armhf python3-cpuinfo all 5.0.0-5 [19.2 kB]
Get:146 http://172.17.4.1/private bookworm-staging/main armhf python3-cycler all 0.11.0-1 [8020 B]
Get:147 http://172.17.4.1/private bookworm-staging/main armhf python3-six all 1.16.0-4 [17.5 kB]
Get:148 http://172.17.4.1/private bookworm-staging/main armhf python3-dateutil all 2.8.2-1 [78.2 kB]
Get:149 http://172.17.4.1/private bookworm-staging/main armhf python3-decorator all 5.1.1-3 [14.9 kB]
Get:150 http://172.17.4.1/private bookworm-staging/main armhf python3-depinfo armhf 2.2.0-1 [11.6 kB]
Get:151 http://172.17.4.1/private bookworm-staging/main armhf python3.10-dev armhf 3.10.9-1 [512 kB]
Get:152 http://172.17.4.1/private bookworm-staging/main armhf python3-dev armhf 3.10.6-3 [26.0 kB]
Get:153 http://172.17.4.1/private bookworm-staging/main armhf python3-diskcache all 5.4.0-1 [33.7 kB]
Get:154 http://172.17.4.1/private bookworm-staging/main armhf python3.11 armhf 3.11.1-2 [567 kB]
Get:155 http://172.17.4.1/private bookworm-staging/main armhf python3-numpy armhf 1:1.23.5-2+b1 [5285 kB]
Get:156 http://172.17.4.1/private bookworm-staging/main armhf python3-scipy armhf 1.8.1-14+rpi1 [12.9 MB]
Get:157 http://172.17.4.1/private bookworm-staging/main armhf python3-ufolib2 all 0.13.1+dfsg1-1 [32.0 kB]
Get:158 http://172.17.4.1/private bookworm-staging/main armhf python3-mpmath all 1.2.1-2 [418 kB]
Get:159 http://172.17.4.1/private bookworm-staging/main armhf python3-sympy all 1.11.1-1 [4358 kB]
Get:160 http://172.17.4.1/private bookworm-staging/main armhf python3-tz all 2022.7-1 [32.1 kB]
Get:161 http://172.17.4.1/private bookworm-staging/main armhf python3-fs all 2.4.16-2 [95.2 kB]
Get:162 http://172.17.4.1/private bookworm-staging/main armhf python3-lxml armhf 4.9.2-1 [1528 kB]
Get:163 http://172.17.4.1/private bookworm-staging/main armhf python3-lz4 armhf 4.0.2+dfsg-1 [23.9 kB]
Get:164 http://172.17.4.1/private bookworm-staging/main armhf python3-unicodedata2 armhf 14.0.0+ds2-1 [298 kB]
Get:165 http://172.17.4.1/private bookworm-staging/main armhf unicode-data all 15.0.0-1 [7984 kB]
Get:166 http://172.17.4.1/private bookworm-staging/main armhf python3-fonttools armhf 4.37.4-1 [983 kB]
Get:167 http://172.17.4.1/private bookworm-staging/main armhf python3-future all 0.18.2-6 [348 kB]
Get:168 http://172.17.4.1/private bookworm-staging/main armhf python3-h11 all 0.13.0-2 [49.9 kB]
Get:169 http://172.17.4.1/private bookworm-staging/main armhf python3-httpcore all 0.16.3-1 [38.4 kB]
Get:170 http://172.17.4.1/private bookworm-staging/main armhf python3-pygments all 2.13.0+dfsg-1 [767 kB]
Get:171 http://172.17.4.1/private bookworm-staging/main armhf python3-rich all 12.6.0-1 [200 kB]
Get:172 http://172.17.4.1/private bookworm-staging/main armhf python3-rfc3986 all 1.5.0-2 [22.2 kB]
Get:173 http://172.17.4.1/private bookworm-staging/main armhf python3-httpx all 0.23.1-1 [71.2 kB]
Get:174 http://172.17.4.1/private bookworm-staging/main armhf python3-more-itertools all 8.10.0-2 [53.0 kB]
Get:175 http://172.17.4.1/private bookworm-staging/main armhf python3-zipp all 1.0.0-6 [6696 B]
Get:176 http://172.17.4.1/private bookworm-staging/main armhf python3-importlib-resources all 5.1.2-2 [19.0 kB]
Get:177 http://172.17.4.1/private bookworm-staging/main armhf python3-iniconfig all 1.1.1-2 [6396 B]
Get:178 http://172.17.4.1/private bookworm-staging/main armhf python3-pyrsistent armhf 0.18.1-1 [57.5 kB]
Get:179 http://172.17.4.1/private bookworm-staging/main armhf python3-jsonschema all 4.9.1-3 [66.0 kB]
Get:180 http://172.17.4.1/private bookworm-staging/main armhf python3-kiwisolver armhf 1.3.2-1+b1 [52.1 kB]
Get:181 http://172.17.4.1/private bookworm-staging/main armhf python3-pil armhf 9.3.0-1 [433 kB]
Get:182 http://172.17.4.1/private bookworm-staging/main armhf python3-tk armhf 3.10.8-1 [101 kB]
Get:183 http://172.17.4.1/private bookworm-staging/main armhf python3-pil.imagetk armhf 9.3.0-1 [73.1 kB]
Get:184 http://172.17.4.1/private bookworm-staging/main armhf python3-pyparsing all 3.0.9-1 [138 kB]
Get:185 http://172.17.4.1/private bookworm-staging/main armhf python3-packaging all 21.3-1.1 [34.2 kB]
Get:186 http://172.17.4.1/private bookworm-staging/main armhf python3-matplotlib armhf 3.5.2-4 [6479 kB]
Get:187 http://172.17.4.1/private bookworm-staging/main armhf python3-swiglpk armhf 4.65.1-1+b1 [71.3 kB]
Get:188 http://172.17.4.1/private bookworm-staging/main armhf python3-optlang all 1.5.2-1 [81.2 kB]
Get:189 http://172.17.4.1/private bookworm-staging/main armhf python3-pandas-lib armhf 1.3.5+dfsg-6 [2906 kB]
Get:190 http://172.17.4.1/private bookworm-staging/main armhf python3-pandas all 1.3.5+dfsg-6 [2646 kB]
Get:191 http://172.17.4.1/private bookworm-staging/main armhf python3-setuptools all 65.5.0-1.1 [519 kB]
Get:192 http://172.17.4.1/private bookworm-staging/main armhf python3-wheel all 0.38.4-1 [30.8 kB]
Get:193 http://172.17.4.1/private bookworm-staging/main armhf python3-pip all 22.3.1+dfsg-1 [1323 kB]
Get:194 http://172.17.4.1/private bookworm-staging/main armhf python3-pipdeptree armhf 2.2.0-3 [20.6 kB]
Get:195 http://172.17.4.1/private bookworm-staging/main armhf python3-pluggy all 1.0.0+repack-1 [19.7 kB]
Get:196 http://172.17.4.1/private bookworm-staging/main armhf python3-py all 1.11.0-1 [89.2 kB]
Get:197 http://172.17.4.1/private bookworm-staging/main armhf python3-pydantic all 1.10.2-1 [170 kB]
Get:198 http://172.17.4.1/private bookworm-staging/main armhf python3-tomli all 2.0.1-2 [17.9 kB]
Get:199 http://172.17.4.1/private bookworm-staging/main armhf python3-pytest all 7.1.2-4 [218 kB]
Get:200 http://172.17.4.1/private bookworm-staging/main armhf python3-pytest-benchmark all 3.2.2-3 [46.4 kB]
Get:201 http://172.17.4.1/private bookworm-staging/main armhf python3-pytest-mock all 3.8.2-3 [16.5 kB]
Get:202 http://172.17.4.1/private bookworm-staging/main armhf python3-urllib3 all 1.26.12-1 [117 kB]
Get:203 http://172.17.4.1/private bookworm-staging/main armhf python3-requests all 2.28.1+dfsg-1 [67.9 kB]
Get:204 http://172.17.4.1/private bookworm-staging/main armhf python3-ruamel.yaml.clib armhf 0.2.7-1 [94.2 kB]
Get:205 http://172.17.4.1/private bookworm-staging/main armhf python3-ruamel.yaml all 0.17.21-1 [103 kB]
Get:206 http://172.17.4.1/private bookworm-staging/main armhf swig4.0 armhf 4.1.0-0.2 [1220 kB]
Get:207 http://172.17.4.1/private bookworm-staging/main armhf swig all 4.1.0-0.2 [321 kB]
Get:208 http://172.17.4.1/private bookworm-staging/main armhf python3-sbml5 armhf 5.19.0+dfsg-3+b1 [2849 kB]
Get:209 http://172.17.4.1/private bookworm-staging/main armhf python3-simplejson armhf 3.18.0-1 [57.8 kB]
Get:210 http://172.17.4.1/private bookworm-staging/main armhf python3-tabulate all 0.8.9-1 [35.2 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Preparing to unpack .../libpython3.10-minimal_3.10.9-1_armhf.deb ...
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Unpacking python3.10-minimal (3.10.9-1) ...
Setting up libpython3.10-minimal:armhf (3.10.9-1) ...
Setting up libexpat1:armhf (2.5.0-1) ...
Setting up python3.10-minimal (3.10.9-1) ...
Selecting previously unselected package python3-minimal.
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Unpacking python3-minimal (3.10.6-3) ...
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invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of restart.
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
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Updating certificates in /etc/ssl/certs...
127 added, 0 removed; done.
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Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
Setting up libfreetype6:armhf (2.12.1+dfsg-3) ...
Setting up libglpk40:armhf (5.0-1) ...
Setting up libsbml5:armhf (5.19.0+dfsg-3+b1) ...
Setting up liblapack-dev:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libjs-sphinxdoc (5.3.0-2) ...
Setting up dh-strip-nondeterminism (1.13.0-2) ...
Setting up dwz (0.15-1) ...
Setting up groff-base (1.22.4-9) ...
Setting up libklu1:armhf (1:5.12.0+dfsg-2) ...
Setting up libccolamd2:armhf (1:5.12.0+dfsg-2) ...
Setting up libxslt1.1:armhf (1.1.35-1) ...
Setting up libx11-6:armhf (2:1.8.3-3) ...
Setting up libharfbuzz0b:armhf (6.0.0-1) ...
Setting up libcholmod3:armhf (1:5.12.0+dfsg-2) ...
Setting up libpython3-stdlib:armhf (3.10.6-3) ...
Setting up liblbfgsb0:armhf (3.0+dfsg.3-11) ...
Setting up libspqr2:armhf (1:5.12.0+dfsg-2) ...
Setting up python3.11 (3.11.1-2) ...
Setting up libpython3.10:armhf (3.10.9-1) ...
Setting up python3.10 (3.10.9-1) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up python3 (3.10.6-3) ...
Setting up man-db (2.11.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-sbml5 (5.19.0+dfsg-3+b1) ...
Setting up python3-tz (2022.7-1) ...
Setting up python3-six (1.16.0-4) ...
Setting up python3-simplejson (3.18.0-1) ...
Setting up python3-decorator (5.1.1-3) ...
Setting up libumfpack5:armhf (1:5.12.0+dfsg-2) ...
Setting up python3-pyparsing (3.0.9-1) ...
Setting up python3-certifi (2022.9.24-1) ...
Setting up python3-brotli (1.0.9-2+b2) ...
Setting up libraqm0:armhf (0.7.0-4) ...
Setting up python3-cycler (0.11.0-1) ...
Setting up python3-kiwisolver (1.3.2-1+b1) ...
Setting up python3-idna (3.3-1) ...
Setting up cython3 (0.29.32-2) ...
Setting up python3-h11 (0.13.0-2) ...
Setting up libpython3.10-dev:armhf (3.10.9-1) ...
Setting up python3-typing-extensions (4.3.0-2) ...
Setting up python3-cpuinfo (5.0.0-5) ...
Setting up python3-urllib3 (1.26.12-1) ...
Setting up python3-pluggy (1.0.0+repack-1) ...
Setting up python3.10-dev (3.10.9-1) ...
Setting up python3-pyrsistent:armhf (0.18.1-1) ...
Setting up python3-lxml:armhf (4.9.2-1) ...
Setting up python3-dateutil (2.8.2-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up python3-mpmath (1.2.1-2) ...
Setting up python3-diskcache (5.4.0-1) ...
Setting up python3-lib2to3 (3.10.8-1) ...
Setting up python3-appdirs (1.4.4-3) ...
Setting up python3-swiglpk (4.65.1-1+b1) ...
Setting up python3-commonmark (0.9.1-4) ...
Setting up python3-pkg-resources (65.5.0-1.1) ...
Setting up python3-distutils (3.10.8-1) ...
Setting up dh-python (5.20220819+rpi1) ...
Setting up python3-more-itertools (8.10.0-2) ...
Setting up python3-iniconfig (1.1.1-2) ...
Setting up python3-sniffio (1.2.0-1) ...
Setting up python3-sympy (1.11.1-1) ...
Setting up python3-attr (22.2.0-1) ...
Setting up libpython3-dev:armhf (3.10.6-3) ...
Setting up python3-setuptools (65.5.0-1.1) ...
Setting up python3-tomli (2.0.1-2) ...
Setting up python3-py (1.11.0-1) ...
Setting up libsuitesparse-dev:armhf (1:5.12.0+dfsg-2) ...
Setting up python3-anyio (3.6.2-1) ...
Setting up python3-colorama (0.4.6-2) ...
Setting up python3-lz4 (4.0.2+dfsg-1) ...
Setting up python3-charset-normalizer (3.0.1-2) ...
Setting up python3-unicodedata2 (14.0.0+ds2-1) ...
Setting up python3-ruamel.yaml.clib:armhf (0.2.7-1) ...
Setting up python3-tabulate (0.8.9-1) ...
Setting up debhelper (13.11.3) ...
Setting up python3-zipp (1.0.0-6) ...
Setting up python3-click (8.1.3-1) ...
Setting up python3-wheel (0.38.4-1) ...
Setting up python3-fs (2.4.16-2) ...
Setting up python3-pygments (2.13.0+dfsg-1) ...
Setting up python3-packaging (21.3-1.1) ...
Setting up python3-chardet (5.1.0+dfsg-2) ...
Setting up python3-rfc3986 (1.5.0-2) ...
Setting up python3-jsonschema (4.9.1-3) ...
Setting up libglpk-dev:armhf (5.0-1) ...
Setting up python3-pydantic (1.10.2-1) ...
Setting up python3-dev (3.10.6-3) ...
Setting up python3-requests (2.28.1+dfsg-1) ...
Setting up python3-depinfo (2.2.0-1) ...
Setting up python3-pip (22.3.1+dfsg-1) ...
Setting up python3-numpy (1:1.23.5-2+b1) ...
Setting up python3-ruamel.yaml (0.17.21-1) ...
Setting up python3-future (0.18.2-6) ...
update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode
update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode
Setting up python3-pipdeptree (2.2.0-3) ...
Setting up python3-optlang (1.5.2-1) ...
Setting up python3-httpcore (0.16.3-1) ...
Setting up python3-scipy (1.8.1-14+rpi1) ...
Setting up python3-importlib-resources (5.1.2-2) ...
Setting up python3-rich (12.6.0-1) ...
Setting up python3-pytest (7.1.2-4) ...
Setting up python3-pandas-lib:armhf (1.3.5+dfsg-6) ...
Setting up python3-pandas (1.3.5+dfsg-6) ...
Setting up python3-httpx (0.23.1-1) ...
Setting up python3-pytest-mock (3.8.2-3) ...
Setting up python3-pytest-benchmark (3.2.2-3) ...
Setting up python3-fonttools (4.37.4-1) ...
Setting up python3-ufolib2 (0.13.1+dfsg1-1) ...
Processing triggers for sgml-base (1.31) ...
Setting up libfontconfig1:armhf (2.13.1-4.5) ...
Setting up libxft2:armhf (2.3.6-1) ...
Setting up libtk8.6:armhf (8.6.13-1) ...
Processing triggers for libc-bin (2.36-6+rpi1) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ...
Setting up blt (2.5.3+dfsg-4.1) ...
Setting up python3-tk:armhf (3.10.8-1) ...
Setting up python3-pil.imagetk:armhf (9.3.0-1) ...
Setting up python3-pil:armhf (9.3.0-1) ...
Setting up python3-matplotlib (3.5.2-4) ...
Setting up sbuild-build-depends-python-cobra-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for libc-bin (2.36-6+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.15.0-187-generic armhf (armv8l)
Toolchain package versions: binutils_2.39.50.20221208-5+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-10+rpi1 gcc-12_12.2.0-10+rpi1 libc6-dev_2.36-6+rpi1 libstdc++-12-dev_12.2.0-10+rpi1 libstdc++6_12.2.0-10+rpi1 linux-libc-dev_6.0.12-1+rpi1
Package versions: adduser_3.129 apt_2.5.4 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2-2 binutils_2.39.50.20221208-5+rpi1 binutils-arm-linux-gnueabihf_2.39.50.20221208-5+rpi1 binutils-common_2.39.50.20221208-5+rpi1 blt_2.5.3+dfsg-4.1 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20211016 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-10+rpi1 cython3_0.29.32-2 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.80 debhelper_13.11.3 debianutils_5.7-0.4 dh-autoreconf_20 dh-python_5.20220819+rpi1 dh-strip-nondeterminism_1.13.0-2 diffutils_1:3.8-1 dirmngr_2.2.40-1 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.15-1 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 file_1:5.41-4 findutils_4.9.0-3 fontconfig-config_2.13.1-4.5 fonts-dejavu-core_2.37-2 fonts-lyx_2.3.6.1-1 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-10+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-10+rpi1 gcc-12-base_12.2.0-10+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-10 gettext-base_0.21-10 gnupg_2.2.40-1 gnupg-l10n_2.2.40-1 gnupg-utils_2.2.40-1 gpg_2.2.40-1 gpg-agent_2.2.40-1 gpg-wks-client_2.2.40-1 gpg-wks-server_2.2.40-1 gpgconf_2.2.40-1 gpgsm_2.2.40-1 gpgv_2.2.40-1 grep_3.8-3 groff-base_1.22.4-9 gzip_1.12-1 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20221126-1 krb5-locales_1.20.1-1 libacl1_2.3.1-2 libamd2_1:5.12.0+dfsg-2 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libasan8_12.2.0-10+rpi1 libassuan0_2.5.5-5 libatomic1_12.2.0-10+rpi1 libattr1_1:2.5.1-3 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1 libbinutils_2.39.50.20221208-5+rpi1 libblas-dev_3.11.0-2 libblas3_3.11.0-2 libblkid1_2.38.1-4 libbrotli1_1.0.9-2+b2 libbsd0_0.11.7-1 libbtf1_1:5.12.0+dfsg-2 libbz2-1.0_1.0.8-5+b2 libc-bin_2.36-6+rpi1 libc-dev-bin_2.36-6+rpi1 libc6_2.36-6+rpi1 libc6-dev_2.36-6+rpi1 libcamd2_1:5.12.0+dfsg-2 libcap-ng0_0.8.3-1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_12.2.0-10+rpi1 libccolamd2_1:5.12.0+dfsg-2 libcholmod3_1:5.12.0+dfsg-2 libcolamd2_1:5.12.0+dfsg-2 libcom-err2_1.46.6~rc1-1 libcrypt-dev_1:4.4.33-1 libcrypt1_1:4.4.33-1 libctf-nobfd0_2.39.50.20221208-5+rpi1 libctf0_2.39.50.20221208-5+rpi1 libcxsparse3_1:5.12.0+dfsg-2 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.265 libdebhelper-perl_13.11.3 libdeflate0_1.14-1 libdpkg-perl_1.21.9+rpi1 libelf1_0.187-2+rpi2 libexpat1_2.5.0-1 libexpat1-dev_2.5.0-1 libext2fs2_1.46.6~rc1-1 libfakeroot_1.29-1 libffi8_3.4.4-1 libfile-stripnondeterminism-perl_1.13.0-2 libfontconfig1_2.13.1-4.5 libfreetype6_2.12.1+dfsg-3 libfribidi0_1.0.8-2.1 libgcc-12-dev_12.2.0-10+rpi1 libgcc-s1_12.2.0-10+rpi1 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgfortran5_12.2.0-10+rpi1 libglib2.0-0_2.74.1-2 libglpk-dev_5.0-1 libglpk40_5.0-1 libgmp-dev_2:6.2.1+dfsg1-1.1 libgmp10_2:6.2.1+dfsg1-1.1 libgmpxx4ldbl_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-4 libgomp1_12.2.0-10+rpi1 libgpg-error0_1.46-1 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.20.1-1 libharfbuzz0b_6.0.0-1 libhogweed6_3.8.1-2 libicu72_72.1-3 libidn2-0_2.3.3-1 libimagequant0_2.17.0-1 libisl23_0.25-1 libjansson4_2.14-2 libjbig0_2.1-6.1 libjpeg62-turbo_1:2.1.2-1 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-jquery-ui_1.13.2+dfsg-1 libjs-sphinxdoc_5.3.0-2 libjs-underscore_1.13.4~dfsg+~1.11.4-2 libk5crypto3_1.20.1-1 libkeyutils1_1.6.3-1 libklu1_1:5.12.0+dfsg-2 libkrb5-3_1.20.1-1 libkrb5support0_1.20.1-1 libksba8_1.6.2-4 liblapack-dev_3.11.0-2 liblapack3_3.11.0-2 liblbfgsb0_3.0+dfsg.3-11 liblcms2-2_2.13.1-1 libldap-2.5-0_2.5.13+dfsg-2+rpi1+b1 libldl2_1:5.12.0+dfsg-2 liblerc4_4.0.0+ds-2 libltdl7_2.4.7-5 liblz4-1_1.9.4-1+rpi1 liblzma5_5.4.0-0.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmd0_1.0.4-2 libmetis5_5.1.0.dfsg-7 libmongoose2_1:5.12.0+dfsg-2 libmount1_2.38.1-4 libmpc3_1.2.1-2 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libopenjp2-7_2.5.0-1 libp11-kit0_0.24.1-1 libpam-cap_1:2.44-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam0g_1.5.2-5 libpcre2-8-0_10.40-3 libpcre3_2:8.39-14 libperl5.36_5.36.0-6 libpipeline1_1.5.7-1 libpng16-16_1.6.39-2 libpython3-dev_3.10.6-3 libpython3-stdlib_3.10.6-3 libpython3.10_3.10.9-1 libpython3.10-dev_3.10.9-1 libpython3.10-minimal_3.10.9-1 libpython3.10-stdlib_3.10.9-1 libpython3.11-minimal_3.11.1-2 libpython3.11-stdlib_3.11.1-2 libqhull-r8.0_2020.2-5 libraqm0_0.7.0-4 librbio2_1:5.12.0+dfsg-2 libreadline8_8.2-1.2 libsasl2-2_2.1.28+dfsg-10 libsasl2-modules-db_2.1.28+dfsg-10 libsbml5_5.19.0+dfsg-3+b1 libseccomp2_2.5.4-1+rpi1 libselinux1_3.4-1 libsemanage-common_3.4-1 libsemanage2_3.4-1 libsepol1_3.1-1 libsepol2_3.4-2 libsliplu1_1:5.12.0+dfsg-2 libsmartcols1_2.38.1-4 libspqr2_1:5.12.0+dfsg-2 libsqlite3-0_3.40.0-1 libss2_1.46.6~rc1-1 libssl1.1_1.1.1o-1 libssl3_3.0.7-1 libstdc++-12-dev_12.2.0-10+rpi1 libstdc++6_12.2.0-10+rpi1 libsub-override-perl_0.09-4 libsuitesparse-dev_1:5.12.0+dfsg-2 libsuitesparseconfig5_1:5.12.0+dfsg-2 libsystemd0_252.2-1+rpi1 libtasn1-6_4.19.0-2 libtcl8.6_8.6.13+dfsg-1 libtiff5_4.4.0-6 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtk8.6_8.6.13-1 libtool_2.4.7-5 libubsan1_12.2.0-10+rpi1 libuchardet0_0.0.7-1 libudev1_252.2-1+rpi1 libumfpack5_1:5.12.0+dfsg-2 libunistring2_1.0-2 libuuid1_2.38.1-4 libwebp7_1.2.2-2+b1 libwebpdemux2_1.2.2-2+b1 libwebpmux3_1.2.2-2+b1 libx11-6_2:1.8.3-3 libx11-data_2:1.8.3-3 libxau6_1:1.0.9-1 libxcb1_1.15-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxft2_2.3.6-1 libxml2_2.9.14+dfsg-1.1 libxrender1_1:0.9.10-1.1 libxslt1.1_1.1.35-1 libxss1_1:1.2.3-1 libxxhash0_0.8.1-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_6.0.12-1+rpi1 login_1:4.13+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-1 make_4.3-4.1 man-db_2.11.1-1 mawk_1.3.4.20200120-3.1 media-types_8.0.0 mount_2.38.1-4 nano_7.1-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.4 openssl_3.0.7-1 passwd_1:4.13+dfsg1-1 patch_2.7.6-7 perl_5.36.0-6 perl-base_5.36.0-6 perl-modules-5.36_5.36.0-6 pinentry-curses_1.2.1-1 po-debconf_1.0.21+nmu1 python-matplotlib-data_3.6.2-3 python3_3.10.6-3 python3-anyio_3.6.2-1 python3-appdirs_1.4.4-3 python3-attr_22.2.0-1 python3-brotli_1.0.9-2+b2 python3-certifi_2022.9.24-1 python3-chardet_5.1.0+dfsg-2 python3-charset-normalizer_3.0.1-2 python3-click_8.1.3-1 python3-colorama_0.4.6-2 python3-commonmark_0.9.1-4 python3-cpuinfo_5.0.0-5 python3-cycler_0.11.0-1 python3-dateutil_2.8.2-1 python3-decorator_5.1.1-3 python3-depinfo_2.2.0-1 python3-dev_3.10.6-3 python3-diskcache_5.4.0-1 python3-distutils_3.10.8-1 python3-fonttools_4.37.4-1 python3-fs_2.4.16-2 python3-future_0.18.2-6 python3-h11_0.13.0-2 python3-httpcore_0.16.3-1 python3-httpx_0.23.1-1 python3-idna_3.3-1 python3-importlib-resources_5.1.2-2 python3-iniconfig_1.1.1-2 python3-jsonschema_4.9.1-3 python3-kiwisolver_1.3.2-1+b1 python3-lib2to3_3.10.8-1 python3-lxml_4.9.2-1 python3-lz4_4.0.2+dfsg-1 python3-matplotlib_3.5.2-4 python3-minimal_3.10.6-3 python3-more-itertools_8.10.0-2 python3-mpmath_1.2.1-2 python3-numpy_1:1.23.5-2+b1 python3-optlang_1.5.2-1 python3-packaging_21.3-1.1 python3-pandas_1.3.5+dfsg-6 python3-pandas-lib_1.3.5+dfsg-6 python3-pil_9.3.0-1 python3-pil.imagetk_9.3.0-1 python3-pip_22.3.1+dfsg-1 python3-pipdeptree_2.2.0-3 python3-pkg-resources_65.5.0-1.1 python3-pluggy_1.0.0+repack-1 python3-py_1.11.0-1 python3-pydantic_1.10.2-1 python3-pygments_2.13.0+dfsg-1 python3-pyparsing_3.0.9-1 python3-pyrsistent_0.18.1-1 python3-pytest_7.1.2-4 python3-pytest-benchmark_3.2.2-3 python3-pytest-mock_3.8.2-3 python3-requests_2.28.1+dfsg-1 python3-rfc3986_1.5.0-2 python3-rich_12.6.0-1 python3-ruamel.yaml_0.17.21-1 python3-ruamel.yaml.clib_0.2.7-1 python3-sbml5_5.19.0+dfsg-3+b1 python3-scipy_1.8.1-14+rpi1 python3-setuptools_65.5.0-1.1 python3-simplejson_3.18.0-1 python3-six_1.16.0-4 python3-sniffio_1.2.0-1 python3-swiglpk_4.65.1-1+b1 python3-sympy_1.11.1-1 python3-tabulate_0.8.9-1 python3-tk_3.10.8-1 python3-tomli_2.0.1-2 python3-typing-extensions_4.3.0-2 python3-tz_2022.7-1 python3-ufolib2_0.13.1+dfsg1-1 python3-unicodedata2_14.0.0+ds2-1 python3-urllib3_1.26.12-1 python3-wheel_0.38.4-1 python3-zipp_1.0.0-6 python3.10_3.10.9-1 python3.10-dev_3.10.9-1 python3.10-minimal_3.10.9-1 python3.11_3.11.1-2 python3.11-minimal_3.11.1-2 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.2 rpcsvc-proto_1.4.3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-cobra-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 swig_4.1.0-0.2 swig4.0_4.1.0-0.2 sysvinit-utils_3.05-7 tar_1.34+dfsg-1 tk8.6-blt2.5_2.5.3+dfsg-4.1 tzdata_2022f-1 ucf_3.0043 unicode-data_15.0.0-1 util-linux_2.38.1-4 util-linux-extra_2.38.1-4 x11-common_1:7.7+23 xz-utils_5.4.0-0.1 zlib1g_1:1.2.13.dfsg-1 zlib1g-dev_1:1.2.13.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.wpyxzDsa/trustedkeys.kbx': General error
gpgv: Signature made Thu Dec 29 12:05:25 2022 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tillea@rki.de"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./python-cobra_0.26.0-3.dsc
dpkg-source: info: extracting python-cobra in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking python-cobra_0.26.0.orig.tar.gz
dpkg-source: info: unpacking python-cobra_0.26.0-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying mathjax.patch
dpkg-source: info: applying xfail_test_show_versions.patch
dpkg-source: info: applying ignore_tests.patch
dpkg-source: info: applying do-not-seek-for-name.patch
dpkg-source: info: applying numpy_1.24.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-996bee85-a7aa-4b8d-85f9-0e53830d6db9
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package python-cobra
dpkg-buildpackage: info: source version 0.26.0-3
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --with python3 --buildsystem=pybuild
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
I: pybuild base:240: python3.10 setup.py clean 
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.10' does not exist -- can't clean it
rm -f cobra/solvers/cglpk.c
rm -rf .pytest_cache
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild
   dh_update_autotools_config -a -O--buildsystem=pybuild
   dh_autoreconf -a -O--buildsystem=pybuild
   dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:240: python3.10 setup.py config 
running config
   dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py build 
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra
copying src/cobra/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra
copying src/cobra/exceptions.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/configuration.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/dictlist.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/formula.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/gene.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/group.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/metabolite.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/model.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/object.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/reaction.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/singleton.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/solution.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
copying src/cobra/core/species.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data
copying src/cobra/data/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/deletion.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/fastcc.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/gapfilling.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/geometric.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/helpers.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/loopless.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/moma.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/parsimonious.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/phenotype_phase_plane.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/reaction.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/room.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
copying src/cobra/flux_analysis/variability.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io
copying src/cobra/io/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io
copying src/cobra/io/json.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io
copying src/cobra/io/mat.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io
copying src/cobra/io/yaml.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io
copying src/cobra/io/sbml.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io
copying src/cobra/io/dict.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation
copying src/cobra/manipulation/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation
copying src/cobra/manipulation/annotate.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation
copying src/cobra/manipulation/delete.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation
copying src/cobra/manipulation/modify.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation
copying src/cobra/manipulation/validate.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium
copying src/cobra/medium/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium
copying src/cobra/medium/annotations.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium
copying src/cobra/medium/boundary_types.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium
copying src/cobra/medium/minimal_medium.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling
copying src/cobra/sampling/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling
copying src/cobra/sampling/achr.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling
copying src/cobra/sampling/core.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling
copying src/cobra/sampling/hr_sampler.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling
copying src/cobra/sampling/optgp.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling
copying src/cobra/sampling/sampling.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary
copying src/cobra/summary/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary
copying src/cobra/summary/metabolite_summary.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary
copying src/cobra/summary/model_summary.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary
copying src/cobra/summary/reaction_summary.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary
copying src/cobra/summary/summary.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util
copying src/cobra/util/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util
copying src/cobra/util/array.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util
copying src/cobra/util/context.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util
copying src/cobra/util/process_pool.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util
copying src/cobra/util/solver.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util
copying src/cobra/util/util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web
copying src/cobra/io/web/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web
copying src/cobra/io/web/abstract_model_repository.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web
copying src/cobra/io/web/bigg_models_repository.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web
copying src/cobra/io/web/biomodels_repository.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web
copying src/cobra/io/web/cobrapy_repository.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web
copying src/cobra/io/web/load.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web
copying src/cobra/data/iJO1366.xml.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data
copying src/cobra/data/mini.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data
copying src/cobra/data/mini.mat -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data
copying src/cobra/data/mini.yml -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data
copying src/cobra/data/mini_cobra.xml -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data
copying src/cobra/data/salmonella.xml.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data
copying src/cobra/data/textbook.xml.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data
copying src/cobra/io/schema_v1.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io
   dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:240: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build; python3.10 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.10.9, pytest-7.1.2, pluggy-1.0.0+repack
benchmark: 3.2.2 (defaults: timer=time.perf_counter disable_gc=False min_rounds=5 min_time=0.000005 max_time=1.0 calibration_precision=10 warmup=False warmup_iterations=100000)
rootdir: /<<PKGBUILDDIR>>, configfile: tox.ini
plugins: anyio-3.6.2, benchmark-3.2.2, mock-3.8.2
collected 548 items

tests/test_core/test_configuration.py ......                             [  1%]
tests/test_core/test_core_reaction.py ..........ss...................... [  7%]
...................x......                                               [ 12%]
tests/test_core/test_dictlist.py ......................                  [ 16%]
tests/test_core/test_formula.py .....                                    [ 16%]
tests/test_core/test_gene.py .                                           [ 17%]
tests/test_core/test_gpr.py .....................x..x................... [ 25%]
..........................                                               [ 29%]
tests/test_core/test_group.py ..                                         [ 30%]
tests/test_core/test_metabolite.py ...ss.ss.                             [ 31%]
tests/test_core/test_model.py .......................................... [ 39%]
...........s..s.ss.                                                      [ 43%]
tests/test_core/test_solution.py .ss                                     [ 43%]
tests/test_flux_analysis/test_deletion.py ....s.....                     [ 45%]
tests/test_flux_analysis/test_fastcc.py ....                             [ 46%]
tests/test_flux_analysis/test_geometric.py ..                            [ 46%]
tests/test_flux_analysis/test_moma.py .                                  [ 46%]
tests/test_flux_analysis/test_parsimonious.py ..                         [ 47%]
tests/test_flux_analysis/test_reaction.py .                              [ 47%]
tests/test_flux_analysis/test_room.py ....                               [ 47%]
tests/test_flux_analysis/test_variability.py .......                     [ 49%]
tests/test_flux_analysis/test_deletion.py sss                            [ 49%]
tests/test_flux_analysis/test_moma.py s                                  [ 50%]
tests/test_flux_analysis/test_deletion.py ......                         [ 51%]
tests/test_flux_analysis/test_gapfilling.py .                            [ 51%]
tests/test_flux_analysis/test_helpers.py ...                             [ 51%]
tests/test_flux_analysis/test_loopless.py .....                          [ 52%]
tests/test_flux_analysis/test_phenotype_phase_plane.py ......            [ 53%]
tests/test_flux_analysis/test_variability.py .......                     [ 55%]
tests/test_io/test_annotation.py ..                                      [ 55%]
tests/test_io/test_annotation_format.py ..                               [ 55%]
tests/test_io/test_io_order.py ...........................               [ 60%]
tests/test_io/test_json.py ....                                          [ 61%]
tests/test_io/test_mat.py ...............                                [ 64%]
tests/test_io/test_notes.py .                                            [ 64%]
tests/test_io/test_pickle.py ..                                          [ 64%]
tests/test_io/test_sbml.py .ssss............xxxx.x.x..s...........       [ 71%]
tests/test_io/test_yaml.py .x                                            [ 72%]
tests/test_io/test_web/test_load.py ..ssss.                              [ 73%]
tests/test_manipulation/test_annotate.py .                               [ 73%]
tests/test_manipulation/test_delete.py .......                           [ 75%]
tests/test_manipulation/test_modify.py ...                               [ 75%]
tests/test_manipulation/test_validate.py ..                              [ 75%]
tests/test_medium/test_boundary_types.py .........                       [ 77%]
tests/test_medium/test_minimal_medium.py ..........                      [ 79%]
tests/test_sampling/test_achr.py ......                                  [ 80%]
tests/test_sampling/test_optgp.py ......                                 [ 81%]
tests/test_sampling/test_sampling.py ..........                          [ 83%]
tests/test_summary/test_metabolite_summary.py .................          [ 86%]
tests/test_summary/test_model_summary.py ...............                 [ 89%]
tests/test_summary/test_reaction_summary.py ....................         [ 92%]
tests/test_util/test_array.py ..                                         [ 93%]
tests/test_util/test_context.py ...                                      [ 93%]
tests/test_util/test_process_pool.py ...............                     [ 96%]
tests/test_util/test_solver.py ..............s                           [ 99%]
tests/test_util/test_util.py ...x                                        [100%]

=============================== warnings summary ===============================
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_and_gpr[a AND b-2-gpr_genes2-a and b]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_and_b_strs]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists1]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists2]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists3]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a AND b'.
    warn(

.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_or_gpr[a OR b-2-gpr_genes2-a or b]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_as_symbolic_boolean[a OR b-symbolic_gpr2]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_or_b_strs]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists4]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists5]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists6]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_from_symbolic[a OR b-symbolic_gpr5]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a OR b'.
    warn(

.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_complicated_gpr[(a OR b) AND c]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_as_symbolic_boolean[(a OR b) AND c-symbolic_gpr6]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_b_c_or_and_strs]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists3]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists6]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists8]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists9]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_from_symbolic[(a OR b) AND c-symbolic_gpr9]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule '(a OR b) AND c'.
    warn(

.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_that_needs_two_replacements
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule '(591001.3.peg.1891 AND 591001.3.peg.1892 AND 591001.3.peg.1893)'.
    warn(

.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_and_b_strs]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists1]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists2]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists3]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'b AND a'.
    warn(

.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_or_b_strs]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists0]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists4]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists5]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists6]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'b OR a'.
    warn(

.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_b_c_or_strs]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists1]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists4]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists7]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists8]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a OR b or c'.
    warn(

.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_equality_with_bolean_logic[a_b_c_and_strs]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists2]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists5]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists7]
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_gpr.py::test_gpr_inequality_boolean[gpr_lists9]
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/gene.py:358: SyntaxWarning: Uppercase AND/OR found in rule 'a AND b and c'.
    warn(

.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_model.py::test_reaction_delete
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_model.py::test_reaction_delete
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/reaction.py:879: DeprecationWarning: delete is deprecated. Use reaction.remove_from_model instead
    warn(

.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_model.py::test_group_loss_of_elements
.pybuild/cpython3_3.10_cobra/build/tests/test_flux_analysis/test_gapfilling.py::test_gapfilling
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/group.py:147: UserWarning: need to pass in a list
    warn("need to pass in a list")

.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_model.py::test_change_objective
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_model.py::test_change_objective
.pybuild/cpython3_3.10_cobra/build/tests/test_core/test_model.py::test_change_objective
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/reaction.py:761: DeprecationWarning: Please use reaction.flux instead.
    warn("Please use reaction.flux instead.", DeprecationWarning)

.pybuild/cpython3_3.10_cobra/build/tests/test_io/test_json.py: 1 warning
.pybuild/cpython3_3.10_cobra/build/tests/test_io/test_mat.py: 5 warnings
.pybuild/cpython3_3.10_cobra/build/tests/test_io/test_pickle.py: 1 warning
.pybuild/cpython3_3.10_cobra/build/tests/test_io/test_sbml.py: 9 warnings
.pybuild/cpython3_3.10_cobra/build/tests/test_io/test_yaml.py: 1 warning
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/solver.py:554: UserWarning: Solver status is 'infeasible'.
    warn(f"Solver status is '{status}'.", UserWarning)

.pybuild/cpython3_3.10_cobra/build/tests/test_medium/test_minimal_medium.py: 37 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium/minimal_medium.py:112: DeprecationWarning: The default dtype for empty Series will be 'object' instead of 'float64' in a future version. Specify a dtype explicitly to silence this warning.
    medium = pd.Series()

.pybuild/cpython3_3.10_cobra/build/tests/test_util/test_process_pool.py::test_with_context
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/process_pool.py:72: PytestMockWarning: Mocks returned by pytest-mock do not need to be used as context managers. The mocker fixture automatically undoes mocking at the end of a test. This warning can be ignored if it was triggered by mocking a context manager. https://github.com/pytest-dev/pytest-mock#note-about-usage-as-context-manager
    self._pool.__enter__()

.pybuild/cpython3_3.10_cobra/build/tests/test_util/test_util.py::test_show_versions
  /usr/lib/python3/dist-packages/depinfo/application/compatibility.py:26: DeprecationWarning: The function 'print_dependencies' is deprecated since version 2.0.0. Please use either the command line interface with command 'depinfo' or import 'depinfo.application.DisplayApplication' in your Python project.
    warn(

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html


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-------------------------------------------------------------------------------------------------------------------------- benchmark: 31 tests --------------------------------------------------------------------------------------------------------------------------
Name (time in us)                                                     Min                        Max                       Mean                  StdDev                     Median                     IQR            Outliers          OPS            Rounds  Iterations
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
test_subtract_metabolite_benchmark[gurobi]                        39.4806 (1.0)              76.4430 (1.11)             43.9614 (1.03)           6.3192 (2.68)             40.5200 (1.0)            5.5619 (9.57)       150;92  22,747.2406 (0.97)        678           1
test_subtract_metabolite_benchmark[cplex]                         40.2816 (1.02)            395.6631 (5.72)             46.1226 (1.08)          14.7719 (6.26)             42.8371 (1.06)           1.8952 (3.26)       16;134  21,681.3254 (0.92)        671           1
test_subtract_metabolite_benchmark[glpk]                          41.0825 (1.04)             69.1786 (1.0)              42.6419 (1.0)            2.3594 (1.0)              42.1219 (1.04)           0.5811 (1.0)         39;82  23,451.0928 (1.0)         688           1
test_achr_sample_benchmark                                     1,601.4166 (40.56)         1,729.1196 (24.99)         1,625.9369 (38.13)         17.5037 (7.42)          1,617.9420 (39.93)         29.0740 (50.03)        93;2     615.0300 (0.03)        351           1
test_change_objective_benchmark[optlang-glpk]                  2,196.3045 (55.63)         6,350.8712 (91.80)         2,247.7740 (52.71)        155.5331 (65.92)         2,242.7663 (55.35)         33.6990 (57.99)         1;7     444.8846 (0.02)        714           1
test_optgp_sample_benchmark                                    2,226.4868 (56.39)         2,744.7492 (39.68)         2,302.0262 (53.99)         56.1762 (23.81)         2,293.8028 (56.61)         43.2404 (74.41)       32;10     434.3999 (0.02)        351           1
test_loopless_benchmark_after                                  9,708.1326 (245.90)        9,969.3984 (144.11)        9,765.0607 (229.00)        44.4432 (18.84)         9,759.4522 (240.86)        47.9389 (82.49)        12;1     102.4059 (0.00)         45           1
test_minimal_medium_mip_benchmark                             49,129.8623 (>1000.0)      50,940.8638 (736.37)       50,129.0272 (>1000.0)      726.9643 (308.11)       50,347.5182 (>1000.0)    1,506.8967 (>1000.0)       6;0      19.9485 (0.00)         11           1
test_minimal_medium_linear_benchmark                          50,722.4016 (>1000.0)      51,723.3498 (747.68)       50,898.3647 (>1000.0)      284.7771 (120.70)       50,804.8199 (>1000.0)      141.9885 (244.33)        1;1      19.6470 (0.00)         11           1
test_loopless_benchmark_before                                53,831.2532 (>1000.0)      54,156.7989 (782.85)       53,978.0219 (>1000.0)       80.3931 (34.07)        53,972.9558 (>1000.0)       53.7941 (92.57)         3;3      18.5261 (0.00)         13           1
test_single_reaction_deletion_benchmark[glpk]                100,838.9853 (>1000.0)     105,000.1495 (>1000.0)     102,579.4707 (>1000.0)    1,178.4353 (499.46)      102,326.1603 (>1000.0)    1,244.3773 (>1000.0)       2;1       9.7485 (0.00)         10           1
test_copy_benchmark[optlang-glpk]                            170,950.5729 (>1000.0)     175,494.3021 (>1000.0)     172,809.6710 (>1000.0)    1,711.2489 (725.29)      172,217.2927 (>1000.0)    2,508.8489 (>1000.0)       2;0       5.7867 (0.00)          6           1
test_single_gene_deletion_fba_benchmark[glpk]                224,554.6393 (>1000.0)     282,348.0144 (>1000.0)     238,998.8445 (>1000.0)   24,342.9594 (>1000.0)     229,817.0403 (>1000.0)   16,495.7298 (>1000.0)       1;1       4.1841 (0.00)          5           1
test_deepcopy_benchmark                                      229,858.6331 (>1000.0)     246,933.3112 (>1000.0)     235,848.3501 (>1000.0)    7,177.9265 (>1000.0)     233,834.5237 (>1000.0)   10,852.8305 (>1000.0)       1;0       4.2400 (0.00)          5           1
test_gpr_equality_benchmark                                  340,296.5590 (>1000.0)     343,467.6528 (>1000.0)     341,694.2254 (>1000.0)    1,255.9469 (532.32)      341,371.5288 (>1000.0)    1,908.0080 (>1000.0)       2;0       2.9266 (0.00)          5           1
test_fastcc_benchmark[glpk]                                  614,576.3397 (>1000.0)     625,913.3890 (>1000.0)     618,787.9734 (>1000.0)    5,057.8287 (>1000.0)     615,741.8340 (>1000.0)    8,087.4106 (>1000.0)       1;0       1.6161 (0.00)          5           1
test_double_gene_deletion_benchmark                          769,122.9992 (>1000.0)     856,960.8591 (>1000.0)     807,642.9270 (>1000.0)   38,617.6944 (>1000.0)     803,366.6089 (>1000.0)   69,508.6243 (>1000.0)       1;0       1.2382 (0.00)          5           1
test_add_metabolite_benchmark[gurobi]                        784,023.0092 (>1000.0)     806,177.5640 (>1000.0)     797,436.3483 (>1000.0)    8,820.0275 (>1000.0)     799,900.0698 (>1000.0)   12,758.6564 (>1000.0)       1;0       1.2540 (0.00)          5           1
test_add_metabolite_benchmark[cplex]                         789,643.9135 (>1000.0)     806,057.1365 (>1000.0)     794,587.2128 (>1000.0)    6,920.5816 (>1000.0)     790,659.8262 (>1000.0)    8,448.1379 (>1000.0)       1;0       1.2585 (0.00)          5           1
test_add_metabolite_benchmark[glpk]                          794,108.9049 (>1000.0)     805,398.5499 (>1000.0)     802,216.2490 (>1000.0)    4,629.7955 (>1000.0)     804,021.0903 (>1000.0)    4,229.0064 (>1000.0)       1;1       1.2465 (0.00)          5           1
test_achr_init_benchmark                                     898,684.5501 (>1000.0)     909,285.8247 (>1000.0)     903,575.9382 (>1000.0)    4,576.4009 (>1000.0)     901,322.1189 (>1000.0)    7,526.5327 (>1000.0)       2;0       1.1067 (0.00)          5           1
test_optgp_init_benchmark                                    900,882.7135 (>1000.0)     918,476.2947 (>1000.0)     907,712.1742 (>1000.0)    6,805.6466 (>1000.0)     905,457.3439 (>1000.0)    8,675.9347 (>1000.0)       2;0       1.1017 (0.00)          5           1
test_single_gene_deletion_linear_moma_benchmark[glpk]      2,026,597.2726 (>1000.0)   2,091,830.4026 (>1000.0)   2,052,332.4765 (>1000.0)   33,471.3444 (>1000.0)   2,028,733.8756 (>1000.0)   59,440.3967 (>1000.0)       2;0       0.4873 (0.00)          5           1
test_flux_variability_loopless_benchmark[glpk]             2,098,505.8509 (>1000.0)   2,293,913.6140 (>1000.0)   2,178,229.3454 (>1000.0)   79,578.3745 (>1000.0)   2,188,799.7575 (>1000.0)  119,191.1930 (>1000.0)       2;0       0.4591 (0.00)          5           1
test_pfba_benchmark[glpk]                                  2,353,728.8681 (>1000.0)   2,618,986.5805 (>1000.0)   2,477,248.5405 (>1000.0)  123,973.5358 (>1000.0)   2,410,222.7502 (>1000.0)  217,983.0102 (>1000.0)       2;0       0.4037 (0.00)          5           1
test_gpr_symbolism_benchmark                               2,498,158.2351 (>1000.0)   2,968,187.4141 (>1000.0)   2,737,360.4208 (>1000.0)  223,368.2238 (>1000.0)   2,758,991.1819 (>1000.0)  433,076.2848 (>1000.0)       2;0       0.3653 (0.00)          5           1
test_single_gene_deletion_linear_room_benchmark[glpk]      2,902,423.1844 (>1000.0)   2,949,687.3207 (>1000.0)   2,913,359.9631 (>1000.0)   20,345.5860 (>1000.0)   2,904,751.7180 (>1000.0)   13,139.1818 (>1000.0)       1;1       0.3432 (0.00)          5           1
test_geometric_fba_benchmark[glpk]                         3,271,459.7434 (>1000.0)   3,332,362.4395 (>1000.0)   3,310,040.3219 (>1000.0)   23,018.6786 (>1000.0)   3,312,991.4105 (>1000.0)   21,540.6809 (>1000.0)       1;0       0.3021 (0.00)          5           1
test_copy_benchmark_large_model[optlang-glpk]              3,561,443.5039 (>1000.0)   4,507,491.2012 (>1000.0)   3,948,500.3613 (>1000.0)  463,626.1237 (>1000.0)   3,640,401.9929 (>1000.0)  810,953.1607 (>1000.0)       1;0       0.2533 (0.00)          5           1
test_double_reaction_deletion_benchmark                    3,732,340.6413 (>1000.0)   4,205,367.0660 (>1000.0)   3,948,007.5173 (>1000.0)  183,921.4740 (>1000.0)   3,976,353.0456 (>1000.0)  265,631.7092 (>1000.0)       2;0       0.2533 (0.00)          5           1
test_flux_variability_benchmark[glpk]                     10,298,062.1383 (>1000.0)  11,190,515.3468 (>1000.0)  10,700,629.9198 (>1000.0)  362,919.0090 (>1000.0)  10,557,833.3400 (>1000.0)  563,290.1182 (>1000.0)       2;0       0.0935 (0.00)          5           1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Legend:
  Outliers: 1 Standard Deviation from Mean; 1.5 IQR (InterQuartile Range) from 1st Quartile and 3rd Quartile.
  OPS: Operations Per Second, computed as 1 / Mean
==== 510 passed, 27 skipped, 11 xfailed, 106 warnings in 864.14s (0:14:24) =====
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=pybuild
   dh_prep -a -O--buildsystem=pybuild
   dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-cobra 
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
  warnings.warn(
running build
running build_py
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-cobra
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/exceptions.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/configuration.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/dictlist.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/formula.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/gene.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/group.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/metabolite.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/model.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/object.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/reaction.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/singleton.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/solution.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/species.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/configuration.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/singleton.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/dictlist.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/object.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/gene.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/species.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/metabolite.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/formula.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/model.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/group.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/reaction.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/core/__pycache__/solution.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data/iJO1366.xml.gz -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data/mini.json -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data/mini.mat -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data/mini.yml -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data/mini_cobra.xml -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data/salmonella.xml.gz -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data/textbook.xml.gz -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/data/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/deletion.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/fastcc.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/gapfilling.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/geometric.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/helpers.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/loopless.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/moma.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/parsimonious.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/phenotype_phase_plane.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/reaction.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/room.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/variability.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/deletion.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/moma.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/parsimonious.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/room.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/fastcc.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/helpers.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/gapfilling.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/geometric.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/variability.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/loopless.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/phenotype_phase_plane.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/flux_analysis/__pycache__/reaction.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/json.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/mat.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/yaml.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/sbml.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/dict.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/abstract_model_repository.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/bigg_models_repository.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/biomodels_repository.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/cobrapy_repository.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/load.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/__pycache__/abstract_model_repository.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/__pycache__/bigg_models_repository.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/__pycache__/biomodels_repository.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/__pycache__/load.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/web/__pycache__/cobrapy_repository.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/schema_v1.json -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/__pycache__/dict.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/__pycache__/json.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/__pycache__/mat.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/__pycache__/sbml.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/io/__pycache__/yaml.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation/annotate.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation/delete.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation/modify.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation/validate.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation/__pycache__/annotate.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation/__pycache__/delete.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation/__pycache__/modify.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/manipulation/__pycache__/validate.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/manipulation/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/medium
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/medium
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium/annotations.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/medium
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium/boundary_types.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/medium
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium/minimal_medium.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/medium
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/medium/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/medium/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium/__pycache__/boundary_types.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/medium/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium/__pycache__/annotations.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/medium/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/medium/__pycache__/minimal_medium.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/medium/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/achr.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/core.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/hr_sampler.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/optgp.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/sampling.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/__pycache__/hr_sampler.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/__pycache__/achr.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/__pycache__/core.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/__pycache__/optgp.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/sampling/__pycache__/sampling.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary/metabolite_summary.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary/model_summary.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary/reaction_summary.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary/summary.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary/__pycache__/summary.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary/__pycache__/metabolite_summary.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary/__pycache__/reaction_summary.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/summary/__pycache__/model_summary.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/array.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/context.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/process_pool.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/solver.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/util.py -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/__pycache__/array.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/__pycache__/context.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/__pycache__/solver.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/__pycache__/util.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/util/__pycache__/process_pool.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_cobra/build/cobra/__pycache__/exceptions.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/.benchmarks
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/__init__.py to __init__.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/exceptions.py to exceptions.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/__init__.py to __init__.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/configuration.py to configuration.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/dictlist.py to dictlist.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/formula.py to formula.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/gene.py to gene.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/group.py to group.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/metabolite.py to metabolite.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/model.py to model.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/object.py to object.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/reaction.py to reaction.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/singleton.py to singleton.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/solution.py to solution.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/core/species.py to species.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/data/__init__.py to __init__.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/__init__.py to __init__.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/deletion.py to deletion.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/fastcc.py to fastcc.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/gapfilling.py to gapfilling.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/geometric.py to geometric.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/helpers.py to helpers.cpython-310.pyc
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byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/moma.py to moma.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/parsimonious.py to parsimonious.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/phenotype_phase_plane.py to phenotype_phase_plane.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/reaction.py to reaction.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/flux_analysis/room.py to room.cpython-310.pyc
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byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/__init__.py to __init__.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/json.py to json.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/mat.py to mat.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/yaml.py to yaml.cpython-310.pyc
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byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/dict.py to dict.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web/__init__.py to __init__.cpython-310.pyc
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byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web/bigg_models_repository.py to bigg_models_repository.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/io/web/biomodels_repository.py to biomodels_repository.cpython-310.pyc
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byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/medium/minimal_medium.py to minimal_medium.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/__init__.py to __init__.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/achr.py to achr.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/core.py to core.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/hr_sampler.py to hr_sampler.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/optgp.py to optgp.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/sampling/sampling.py to sampling.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary/__init__.py to __init__.cpython-310.pyc
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byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/summary/summary.py to summary.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/__init__.py to __init__.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/array.py to array.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/context.py to context.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/process_pool.py to process_pool.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/solver.py to solver.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra/util/util.py to util.cpython-310.pyc
running install_egg_info
running egg_info
creating src/cobra.egg-info
writing src/cobra.egg-info/PKG-INFO
writing dependency_links to src/cobra.egg-info/dependency_links.txt
writing requirements to src/cobra.egg-info/requires.txt
writing top-level names to src/cobra.egg-info/top_level.txt
writing manifest file 'src/cobra.egg-info/SOURCES.txt'
reading manifest file 'src/cobra.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE'
writing manifest file 'src/cobra.egg-info/SOURCES.txt'
Copying src/cobra.egg-info to /<<PKGBUILDDIR>>/debian/python3-cobra/usr/lib/python3.10/dist-packages/cobra-0.26.0.egg-info
Skipping SOURCES.txt
running install_scripts
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install -X update_pickles.py --package=python-cobra-data
dh_install: warning: All requested packages have been excluded (e.g. via a Build-Profile or due to architecture restrictions).
dh_install --remaining-packages
find debian -name __pycache__ | xargs rm -rf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--buildsystem=pybuild
   dh_installchangelogs -a -O--buildsystem=pybuild
   dh_python3 -a -O--buildsystem=pybuild
I: dh_python3 pydist:292: Cannot find package that provides python_libsbml. Please add package that provides it to Build-Depends or add "python_libsbml python3-libsbml" line to debian/py3dist-overrides or add proper dependency to Depends by hand and ignore this info.
   dh_installsystemduser -a -O--buildsystem=pybuild
   dh_lintian -a -O--buildsystem=pybuild
   dh_perl -a -O--buildsystem=pybuild
   dh_link -a -O--buildsystem=pybuild
   dh_strip_nondeterminism -a -O--buildsystem=pybuild
   dh_compress -a -O--buildsystem=pybuild
   dh_fixperms -a -O--buildsystem=pybuild
   dh_missing -a -O--buildsystem=pybuild
   dh_dwz -a -O--buildsystem=pybuild
   dh_strip -a -O--buildsystem=pybuild
   dh_makeshlibs -a -O--buildsystem=pybuild
   dh_shlibdeps -a -O--buildsystem=pybuild
   dh_installdeb -a -O--buildsystem=pybuild
   dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: Depends field of package python3-cobra: substitution variable ${shlibs:Depends} used, but is not defined
   dh_md5sums -a -O--buildsystem=pybuild
   dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'python3-cobra' in '../python3-cobra_0.26.0-3_armhf.deb'.
 dpkg-genbuildinfo --build=any -O../python-cobra_0.26.0-3_armhf.buildinfo
 dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> -O../python-cobra_0.26.0-3_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-01-04T07:23:19Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


python-cobra_0.26.0-3_armhf.changes:
------------------------------------

Format: 1.8
Date: Thu, 29 Dec 2022 13:03:36 +0100
Source: python-cobra
Binary: python3-cobra
Architecture: armhf
Version: 0.26.0-3
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 python3-cobra - constraint-based modeling of biological networks with Python 3
Closes: 1027252
Changes:
 python-cobra (0.26.0-3) unstable; urgency=medium
 .
   * Team upload.
   * Standards-Version: 4.6.2 (routine-update)
   * Fix AttributeError: module 'numpy' has no attribute 'float'
     Closes: #1027252
Checksums-Sha1:
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 f913d15c1aa6f0b55d84580bb5defdcee953a871 1118532 python3-cobra_0.26.0-3_armhf.deb
Checksums-Sha256:
 da97bc003c728b1032ddc4ab0f7a49fb4112a3210457e1f5201345fb754c4cd9 10393 python-cobra_0.26.0-3_armhf.buildinfo
 c4cdecbc143828a03de075769ecc319912d4a2a4ffa46ed9d8f894b1c1fa9880 1118532 python3-cobra_0.26.0-3_armhf.deb
Files:
 5538e23238a770a81642a45f26e6ca19 10393 python optional python-cobra_0.26.0-3_armhf.buildinfo
 219abfa6ebfb988f302bf8c833fa99a9 1118532 python optional python3-cobra_0.26.0-3_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


python3-cobra_0.26.0-3_armhf.deb
--------------------------------

 new Debian package, version 2.0.
 size 1118532 bytes: control archive=3528 bytes.
    1217 bytes,    19 lines      control              
    7584 bytes,    84 lines      md5sums              
     273 bytes,    12 lines   *  postinst             #!/bin/sh
     386 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: python3-cobra
 Source: python-cobra
 Version: 0.26.0-3
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1873
 Depends: python3-appdirs (>= 1.4), python3-appdirs (<< 2), python3-depinfo, python3-diskcache, python3-future, python3-httpx, python3-importlib-resources, python3-numpy, python3-optlang, python3-pandas, python3-pydantic, python3-rich, python3-ruamel.yaml, python3-swiglpk (>= 4.65.1), python3:any, python-cobra-data (= 0.26.0-3), python3-simplejson, python3-tabulate, python3-sbml5
 Suggests: python3-matplotlib, qsopt-ex
 Section: python
 Priority: optional
 Homepage: https://opencobra.github.io/cobrapy/
 Description: constraint-based modeling of biological networks with Python 3
  COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely
  used for genome-scale modeling of metabolic networks in both prokaryotes
  and eukaryotes. COBRApy is a constraint-based modeling package that is
  designed to accommodate the biological complexity of the next generation
  of COBRA models and provides access to commonly used COBRA methods, such
  as flux balance analysis, flux variability analysis, and gene deletion
  analyses.

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-rw-r--r-- root/root      1115 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/manipulation/annotate.py
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-rw-r--r-- root/root      5287 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/manipulation/modify.py
-rw-r--r-- root/root      1714 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/manipulation/validate.py
drwxr-xr-x root/root         0 2022-12-29 12:03 ./usr/lib/python3/dist-packages/cobra/medium/
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-rw-r--r-- root/root      2212 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/medium/annotations.py
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-rw-r--r-- root/root      9707 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/medium/minimal_medium.py
drwxr-xr-x root/root         0 2022-12-29 12:03 ./usr/lib/python3/dist-packages/cobra/sampling/
-rw-r--r-- root/root       165 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/sampling/__init__.py
-rw-r--r-- root/root      5962 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/sampling/achr.py
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-rw-r--r-- root/root      8884 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/sampling/optgp.py
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drwxr-xr-x root/root         0 2022-12-29 12:03 ./usr/lib/python3/dist-packages/cobra/summary/
-rw-r--r-- root/root       165 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/summary/__init__.py
-rw-r--r-- root/root     14062 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/summary/metabolite_summary.py
-rw-r--r-- root/root     16020 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/summary/model_summary.py
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drwxr-xr-x root/root         0 2022-12-29 12:03 ./usr/lib/python3/dist-packages/cobra/test/
lrwxrwxrwx root/root         0 2022-12-29 12:03 ./usr/lib/python3/dist-packages/cobra/test/data -> ../../../../../share/python-cobra/data
drwxr-xr-x root/root         0 2022-12-29 12:03 ./usr/lib/python3/dist-packages/cobra/util/
-rw-r--r-- root/root       164 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/util/__init__.py
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-rw-r--r-- root/root      1327 2022-11-08 20:53 ./usr/lib/python3/dist-packages/cobra/util/util.py
drwxr-xr-x root/root         0 2022-12-29 12:03 ./usr/share/
drwxr-xr-x root/root         0 2022-12-29 12:03 ./usr/share/doc/
drwxr-xr-x root/root         0 2022-12-29 12:03 ./usr/share/doc/python3-cobra/
-rw-r--r-- root/root      2188 2022-11-08 20:53 ./usr/share/doc/python3-cobra/README.rst.gz
-rw-r--r-- root/root      1534 2022-12-29 12:03 ./usr/share/doc/python3-cobra/changelog.Debian.gz
-rw-r--r-- root/root      2078 2022-12-29 12:03 ./usr/share/doc/python3-cobra/copyright
drwxr-xr-x root/root         0 2022-12-29 12:03 ./usr/share/lintian/
drwxr-xr-x root/root         0 2022-12-29 12:03 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       146 2022-12-29 12:03 ./usr/share/lintian/overrides/python3-cobra


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 19096
Build-Time: 900
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 949
Job: python-cobra_0.26.0-3
Machine Architecture: armhf
Package: python-cobra
Package-Time: 1868
Source-Version: 0.26.0-3
Space: 19096
Status: successful
Version: 0.26.0-3
--------------------------------------------------------------------------------
Finished at 2023-01-04T07:23:19Z
Build needed 00:31:08, 19096k disk space

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