python-biom-format →
2.1.9-2 →
armhf → 2020-11-12 07:39:33
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02
+==============================================================================+
| python-biom-format 2.1.9-2 (armhf) Thu, 12 Nov 2020 07:23:50 +0000 |
+==============================================================================+
Package: python-biom-format
Version: 2.1.9-2
Source Version: 2.1.9-2
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-a392e4b3-e558-4583-8a5c-e81c3b5ccbb5' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
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Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.8 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
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Check APT
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Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'python-biom-format' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-biom-format.git
Please use:
git clone https://salsa.debian.org/med-team/python-biom-format.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 8544 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main python-biom-format 2.1.9-2 (dsc) [2564 B]
Get:2 http://172.17.0.1/private bullseye-staging/main python-biom-format 2.1.9-2 (tar) [8531 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main python-biom-format 2.1.9-2 (diff) [10.5 kB]
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Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/python-biom-format-A1zZtY/python-biom-format-2.1.9' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-biom-format-A1zZtY' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
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Setup apt archive
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-0maui9/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-0maui9/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-0maui9/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-0maui9/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-0maui9/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-0maui9/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-0maui9/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-0maui9/apt_archive ./ Packages [433 B]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils krb5-locales libpam-cap netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 25 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-0maui9/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (56.2 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12710 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
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Arch check ok (armhf included in any-amd64 any-arm64 any-i386 any-mips64el any-ppc64el armel armhf mipsel all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov
Filtered Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov
dpkg-deb: building package 'sbuild-build-depends-python-biom-format-dummy' in '/<<BUILDDIR>>/resolver-0maui9/apt_archive/sbuild-build-depends-python-biom-format-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-python-biom-format-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-0maui9/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-0maui9/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-0maui9/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-0maui9/apt_archive ./ Sources [611 B]
Get:5 copy:/<<BUILDDIR>>/resolver-0maui9/apt_archive ./ Packages [681 B]
Fetched 2625 B in 0s (10.5 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install python-biom-format build dependencies (apt-based resolver)
------------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bash-completion ca-certificates
cpp-10 cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism
docutils-common dwz file fonts-lyx g++-10 gcc-10 gcc-10-base gettext
gettext-base groff-base help2man intltool-debian libaec0 libarchive-zip-perl
libasan6 libatomic1 libblas3 libbrotli1 libbsd0 libcc1-0 libcroco3
libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libfreetype6 libgcc-10-dev libgcc-s1
libgfortran5 libglib2.0-0 libgomp1 libhdf5-103-1 libhdf5-hl-100 libicu67
libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-hotkeys
libjs-jquery-isonscreen libjs-jquery-metadata libjs-jquery-tablesorter
libjs-jquery-throttle-debounce libjs-jquery-ui libjs-sphinxdoc
libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblocale-gettext-perl
liblzf1 libmagic-mgc libmagic1 libpipeline1 libpng16-16 libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev
libpython3.8-minimal libpython3.8-stdlib libpython3.9 libpython3.9-dev
libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libstdc++-10-dev
libstdc++6 libsub-override-perl libsz2 libtiff5 libtool libubsan1
libuchardet0 libwebp6 libwebpdemux2 libwebpmux3 libxau6 libxcb1 libxdmcp6
libxml2 m4 man-db mime-support node-jquery openssl po-debconf
python-babel-localedata python-matplotlib-data python3 python3-alabaster
python3-all python3-all-dev python3-atomicwrites python3-attr python3-babel
python3-certifi python3-chardet python3-click python3-colorama
python3-cov-core python3-coverage python3-cycler python3-dateutil
python3-decorator python3-dev python3-distutils python3-docutils
python3-future python3-h5py python3-h5py-serial python3-idna
python3-imagesize python3-importlib-metadata python3-jinja2
python3-kiwisolver python3-lib2to3 python3-markupsafe python3-matplotlib
python3-minimal python3-more-itertools python3-nose python3-nose2
python3-numpy python3-packaging python3-pandas python3-pandas-lib
python3-pil python3-pkg-resources python3-pluggy python3-py python3-pygments
python3-pyparsing python3-pytest python3-pytest-cov python3-requests
python3-roman python3-scipy python3-setuptools python3-six
python3-snowballstemmer python3-sphinx python3-tz python3-urllib3
python3-wcwidth python3-zipp python3.8 python3.8-dev python3.8-minimal
python3.9 python3.9-dev python3.9-minimal sgml-base sphinx-common
ttf-bitstream-vera xml-core zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc gcc-10-locales cython-doc
dh-make gcc-10-doc gettext-doc libasprintf-dev libgettextpo-dev groff
libjs-jquery-ui-docs liblcms2-utils libstdc++-10-doc libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl python3-doc python3-tk python3-venv python-attr-doc
python-coverage-doc python-cycler-doc docutils-doc fonts-linuxlibertine
| ttf-linux-libertine texlive-lang-french texlive-latex-base
texlive-latex-recommended python-future-doc python-h5py-doc
python-jinja2-doc dvipng ffmpeg ghostscript gir1.2-gtk-3.0 inkscape ipython3
librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi
python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado
texlive-extra-utils texlive-latex-extra ttf-staypuft python-nose-doc
python-nose2-doc gfortran python-numpy-doc python3-numpy-dbg
python-pandas-doc python3-statsmodels python-pil-doc python3-pil-dbg
subversion python-pygments-doc python-pyparsing-doc python3-cryptography
python3-openssl python3-socks python-requests-doc python-scipy-doc
python-setuptools-doc python3-stemmer fonts-freefont-otf imagemagick-6.q16
latexmk libjs-mathjax python3-sphinx-rtd-theme sphinx-doc
texlive-fonts-recommended texlive-plain-generic python3.8-venv python3.8-doc
binfmt-support python3.9-venv python3.9-doc sgml-base-doc
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs javascript-common libltdl-dev libmail-sendmail-perl
libpaper-utils python3-tk python3-bottleneck python3-numexpr python3-odf
python3-openpyxl python3-xlrd python3-xlwt python3-bs4 python3-html5lib
python3-lxml python3-tables python3-olefile
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bash-completion ca-certificates
cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism
docutils-common dwz file fonts-lyx gettext gettext-base groff-base help2man
intltool-debian libaec0 libarchive-zip-perl libblas3 libbrotli1 libbsd0
libcroco3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libfreetype6 libgfortran5 libglib2.0-0
libhdf5-103-1 libhdf5-hl-100 libicu67 libimagequant0 libjbig0
libjpeg62-turbo libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen
libjs-jquery-metadata libjs-jquery-tablesorter
libjs-jquery-throttle-debounce libjs-jquery-ui libjs-sphinxdoc
libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblocale-gettext-perl
liblzf1 libmagic-mgc libmagic1 libpipeline1 libpng16-16 libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev
libpython3.8-minimal libpython3.8-stdlib libpython3.9 libpython3.9-dev
libpython3.9-minimal libpython3.9-stdlib libsigsegv2 libsub-override-perl
libsz2 libtiff5 libtool libuchardet0 libwebp6 libwebpdemux2 libwebpmux3
libxau6 libxcb1 libxdmcp6 libxml2 m4 man-db mime-support node-jquery openssl
po-debconf python-babel-localedata python-matplotlib-data python3
python3-alabaster python3-all python3-all-dev python3-atomicwrites
python3-attr python3-babel python3-certifi python3-chardet python3-click
python3-colorama python3-cov-core python3-coverage python3-cycler
python3-dateutil python3-decorator python3-dev python3-distutils
python3-docutils python3-future python3-h5py python3-h5py-serial
python3-idna python3-imagesize python3-importlib-metadata python3-jinja2
python3-kiwisolver python3-lib2to3 python3-markupsafe python3-matplotlib
python3-minimal python3-more-itertools python3-nose python3-nose2
python3-numpy python3-packaging python3-pandas python3-pandas-lib
python3-pil python3-pkg-resources python3-pluggy python3-py python3-pygments
python3-pyparsing python3-pytest python3-pytest-cov python3-requests
python3-roman python3-scipy python3-setuptools python3-six
python3-snowballstemmer python3-sphinx python3-tz python3-urllib3
python3-wcwidth python3-zipp python3.8 python3.8-dev python3.8-minimal
python3.9 python3.9-dev python3.9-minimal
sbuild-build-depends-python-biom-format-dummy sgml-base sphinx-common
ttf-bitstream-vera xml-core zlib1g-dev
The following packages will be upgraded:
cpp-10 g++-10 gcc-10 gcc-10-base libasan6 libatomic1 libcc1-0 libgcc-10-dev
libgcc-s1 libgomp1 libstdc++-10-dev libstdc++6 libubsan1
13 upgraded, 159 newly installed, 0 to remove and 12 not upgraded.
Need to get 268 MB of archives.
After this operation, 937 MB of additional disk space will be used.
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Get:2 http://172.17.0.1/private bullseye-staging/main armhf liblocale-gettext-perl armhf 1.07-4 [18.1 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libubsan1 armhf 10.2.0-16+rpi1 [115 kB]
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Get:5 http://172.17.0.1/private bullseye-staging/main armhf libgcc-s1 armhf 10.2.0-16+rpi1 [36.1 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libgomp1 armhf 10.2.0-16+rpi1 [83.7 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libatomic1 armhf 10.2.0-16+rpi1 [8208 B]
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Get:16 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
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Get:20 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-minimal armhf 3.8.6-1 [752 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.10-1 [73.3 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf python3.8-minimal armhf 3.8.6-1 [1552 kB]
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Get:32 http://172.17.0.1/private bullseye-staging/main armhf node-jquery all 3.5.1+dfsg+~3.5.4-1 [390 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.5.1+dfsg+~3.5.4-1 [3844 B]
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Get:36 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
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Get:38 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
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Get:48 http://172.17.0.1/private bullseye-staging/main armhf cython3 armhf 0.29.21-3 [1258 kB]
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Get:58 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.2-1 [1176 kB]
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Get:63 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2.1 [1007 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.6-1 [78.4 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.6-1 [145 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20201102 [99.3 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf xml-core all 0.18+nmu1 [23.8 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf docutils-common all 0.16+dfsg-3 [129 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf fonts-lyx all 2.3.5.2-1 [200 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf help2man armhf 1.47.16 [181 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libaec0 armhf 1.0.4-1 [20.0 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-3 [108 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.9-2 [259 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.10-1 [121 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-3 [276 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.2+dfsg-4 [345 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.2.0-16+rpi1 [232 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libsz2 armhf 1.0.4-1 [6664 B]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-103-1 armhf 1.10.6+repack-2 [1184 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-hl-100 armhf 1.10.6+repack-2 [78.1 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libimagequant0 armhf 2.12.2-1.1 [27.2 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:2.0.5-1.1 [121 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-metadata all 12-1.1 [7420 B]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-tablesorter all 1:2.31.3+dfsg1-1 [185 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-throttle-debounce all 1.1+dfsg.1-1 [6178 B]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-ui all 1.12.1+dfsg-7 [232 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libjs-underscore all 1.9.1~dfsg-1 [99.4 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libjs-sphinxdoc all 3.2.1-2 [122 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-3 [1597 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.3-9 [24.6 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.9-4 [119 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf liblzf1 armhf 3.6-2 [9092 B]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8 armhf 3.8.6-1 [1343 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-dev armhf 3.8.6-1 [2887 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.8.6-1 [21.1 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-stdlib armhf 3.9.0-5+rpi1 [1654 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9 armhf 3.9.0-5+rpi1 [1411 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-dev armhf 3.9.0-5+rpi1 [3053 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libpython3-all-dev armhf 3.8.6-1 [1072 B]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libwebpmux3 armhf 0.6.1-2 [94.2 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf python-babel-localedata all 2.8.0+dfsg.1-4 [4996 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf ttf-bitstream-vera all 1.10-8 [352 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf python-matplotlib-data all 3.3.2-2 [4153 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf python3-alabaster all 0.7.8-1.1 [18.6 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf python3.9 armhf 3.9.0-5+rpi1 [455 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf python3-all armhf 3.8.6-1 [1060 B]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf python3.8-dev armhf 3.8.6-1 [519 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.8.6-1 [1164 B]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf python3.9-dev armhf 3.9.0-5+rpi1 [501 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf python3-all-dev armhf 3.8.6-1 [1076 B]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf python3-atomicwrites all 1.4.0-1 [10.2 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf python3-attr all 20.1.0-1 [51.8 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 50.3.0-1 [187 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf python3-tz all 2020.1-2 [34.6 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf python3-babel all 2.8.0+dfsg.1-4 [99.9 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf python3-certifi all 2020.6.20-1 [151 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf python3-chardet all 3.0.4-7 [81.1 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf python3-colorama all 0.4.3-1 [27.8 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf python3-click all 7.1.2-1 [75.7 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf python3-coverage armhf 5.1+dfsg.1-2 [167 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf python3-six all 1.15.0-1 [16.8 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf python3-nose2 all 0.9.2-1 [94.1 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf python3-cov-core all 1.15.0-3 [7528 B]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf python3-cycler all 0.10.0-3 [8084 B]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf python3-dateutil all 2.8.1-4 [81.6 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf python3-decorator all 4.4.2-2 [15.8 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf python3-roman all 2.0.0-5 [9064 B]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf python3-docutils all 0.16+dfsg-3 [384 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf python3-future all 0.18.2-4 [348 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf python3-numpy armhf 1:1.19.4-1 [2961 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf python3-h5py-serial armhf 2.10.0-9 [596 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf python3-h5py all 2.10.0-9 [11.4 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf python3-idna all 2.10-1 [37.4 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf python3-imagesize all 1.2.0-2 [5824 B]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf python3-more-itertools all 4.2.0-3 [42.7 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf python3-zipp all 1.0.0-3 [6060 B]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf python3-importlib-metadata all 1.6.0-2 [10.3 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf python3-markupsafe armhf 1.1.1-1 [15.0 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf python3-jinja2 all 2.11.2-1 [113 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf python3-kiwisolver armhf 1.2.0-1 [45.5 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf python3-pyparsing all 2.4.7-1 [109 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf python3-pil armhf 8.0.1-1 [405 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf python3-matplotlib armhf 3.3.2-2 [4103 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf python3-nose all 1.3.7-7 [133 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf python3-packaging all 20.4-1 [30.4 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas-lib armhf 1.1.4+dfsg-1 [2964 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas all 1.1.4+dfsg-1 [2092 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf python3-pluggy all 0.13.0-5 [22.1 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf python3-py all 1.9.0-1 [94.0 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf python3-pygments all 2.3.1+dfsg-4 [596 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf python3-wcwidth all 0.1.9+dfsg1-2 [18.2 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf python3-pytest all 4.6.11-1 [268 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-isonscreen all 1.2.0-1 [3046 B]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf python3-pytest-cov all 2.8.1-1 [22.1 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf python3-urllib3 all 1.25.9-1 [105 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf python3-requests all 2.24.0+dfsg-1 [71.7 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf python3-scipy armhf 1.5.2-2 [10.2 MB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf python3-setuptools all 50.3.0-1 [511 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf python3-snowballstemmer all 2.0.0-2 [58.2 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf sphinx-common all 3.2.1-2 [574 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf python3-sphinx all 3.2.1-2 [534 kB]
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Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up liblcms2-2:armhf (2.9-4) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up ttf-bitstream-vera (1.10-8) ...
Setting up mime-support (3.64) ...
Setting up libicu67:armhf (67.1-4) ...
Setting up libmagic-mgc (1:5.38-5) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.66.2-1) ...
No schema files found: doing nothing.
Setting up libpython3.9-minimal:armhf (3.9.0-5+rpi1) ...
Setting up fonts-lyx (2.3.5.2-1) ...
Setting up libdebhelper-perl (13.2.1) ...
Setting up libbrotli1:armhf (1.0.9-2) ...
Setting up libmagic1:armhf (1:5.38-5) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up file (1:5.38-5) ...
Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-1) ...
Setting up libgomp1:armhf (10.2.0-16+rpi1) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libaec0:armhf (1.0.4-1) ...
Setting up python-babel-localedata (2.8.0+dfsg.1-4) ...
Setting up libasan6:armhf (10.2.0-16+rpi1) ...
Setting up autotools-dev (20180224.1) ...
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libexpat1-dev:armhf (2.2.10-1) ...
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Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up sgml-base (1.30) ...
Setting up libtiff5:armhf (4.1.0+git191117-2) ...
Setting up python3.9-minimal (3.9.0-5+rpi1) ...
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Setting up python-matplotlib-data (3.3.2-2) ...
Setting up openssl (1.1.1h-1) ...
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Setting up liblocale-gettext-perl (1.07-4) ...
Setting up cpp-10 (10.2.0-16+rpi1) ...
Setting up node-jquery (3.5.1+dfsg+~3.5.4-1) ...
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Setting up libpython3.9-stdlib:armhf (3.9.0-5+rpi1) ...
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Setting up ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
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Setting up gcc-10 (10.2.0-16+rpi1) ...
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Setting up python3-lib2to3 (3.8.6-1) ...
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Setting up python3-pkg-resources (50.3.0-1) ...
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up python3-distutils (3.8.6-1) ...
Setting up dh-python (4.20201102) ...
Setting up python3-more-itertools (4.2.0-3) ...
Setting up python3-attr (20.1.0-1) ...
Setting up gettext (0.19.8.1-10) ...
Setting up libstdc++-10-dev:armhf (10.2.0-16+rpi1) ...
Setting up g++-10 (10.2.0-16+rpi1) ...
Setting up python3-setuptools (50.3.0-1) ...
Setting up python3-py (1.9.0-1) ...
Setting up python3-babel (2.8.0+dfsg.1-4) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python3-colorama (0.4.3-1) ...
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Setting up libpython3.9-dev:armhf (3.9.0-5+rpi1) ...
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Setting up python3-coverage (5.1+dfsg.1-2) ...
Setting up python3-nose2 (0.9.2-1) ...
Setting up python3-zipp (1.0.0-3) ...
Setting up python3-click (7.1.2-1) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-nose (1.3.7-7) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up python3-pil:armhf (8.0.1-1) ...
Setting up python3-pygments (2.3.1+dfsg-4) ...
Setting up python3-packaging (20.4-1) ...
Setting up python3-chardet (3.0.4-7) ...
Setting up libjs-jquery-ui (1.12.1+dfsg-7) ...
Setting up libpython3.8-dev:armhf (3.8.6-1) ...
Setting up libjs-jquery-metadata (12-1.1) ...
Setting up python3-requests (2.24.0+dfsg-1) ...
Setting up libjs-jquery-isonscreen (1.2.0-1) ...
Setting up python3-numpy (1:1.19.4-1) ...
Setting up libjs-sphinxdoc (3.2.1-2) ...
Setting up python3.8-dev (3.8.6-1) ...
Setting up python3.9-dev (3.9.0-5+rpi1) ...
Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-1) ...
Setting up python3-future (0.18.2-4) ...
update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode
update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode
Setting up python3-matplotlib (3.3.2-2) ...
Setting up python3-scipy (1.5.2-2) ...
Setting up libpython3-dev:armhf (3.8.6-1) ...
Setting up python3-importlib-metadata (1.6.0-2) ...
Setting up python3-cov-core (1.15.0-3) ...
Setting up po-debconf (1.0.21) ...
Setting up python3-pandas-lib:armhf (1.1.4+dfsg-1) ...
Setting up python3-h5py-serial (2.10.0-9) ...
Setting up python3-pandas (1.1.4+dfsg-1) ...
Setting up libpython3-all-dev:armhf (3.8.6-1) ...
Setting up sphinx-common (3.2.1-2) ...
Setting up python3-dev (3.8.6-1) ...
Setting up python3-h5py (2.10.0-9) ...
Setting up python3-pluggy (0.13.0-5) ...
Setting up python3-all-dev (3.8.6-1) ...
Setting up python3-pytest (4.6.11-1) ...
Setting up python3-pytest-cov (2.8.1-1) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.2.1) ...
Processing triggers for libc-bin (2.31-4+rpi1) ...
Processing triggers for sgml-base (1.30) ...
Setting up docutils-common (0.16+dfsg-3) ...
Processing triggers for sgml-base (1.30) ...
Setting up python3-docutils (0.16+dfsg-3) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-sphinx (3.2.1-2) ...
Setting up sbuild-build-depends-python-biom-format-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-76-generic armhf (armv8l)
Toolchain package versions: binutils_2.35.1-2+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.0-16+rpi1 gcc-10_10.2.0-16+rpi1 libc6-dev_2.31-4+rpi1 libstdc++-10-dev_10.2.0-16+rpi1 libstdc++6_10.2.0-16+rpi1 linux-libc-dev_5.7.10-1+rpi1
Package versions: adduser_3.118 apt_2.1.10 aptitude_0.8.13-2 aptitude-common_0.8.13-2 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1~rc1-2 bash-completion_1:2.11-2 binutils_2.35.1-2+rpi1 binutils-arm-linux-gnueabihf_2.35.1-2+rpi1 binutils-common_2.35.1-2+rpi1 bsdextrautils_2.36-3 bsdutils_1:2.36-3 build-essential_12.8 bzip2_1.0.8-4 ca-certificates_20200601 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.0-16+rpi1 cython3_0.29.21-3 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2.1 debianutils_4.11.2 dh-autoreconf_19 dh-python_4.20201102 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 docutils-common_0.16+dfsg-3 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1 fdisk_2.36-3 file_1:5.38-5 findutils_4.7.0-1 fonts-lyx_2.3.5.2-1 g++_4:10.2.0-1+rpi1 g++-10_10.2.0-16+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.0-16+rpi1 gcc-10-base_10.2.0-16+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 help2man_1.47.16 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20200821-2 krb5-locales_1.17-10 libacl1_2.2.53-8 libaec0_1.0.4-1 libapt-pkg6.0_2.1.10 libarchive-zip-perl_1.68-1 libasan6_10.2.0-16+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-16+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1 libbinutils_2.35.1-2+rpi1 libblas3_3.9.0-3 libblkid1_2.36-3 libboost-iostreams1.71.0_1.71.0-7 libbrotli1_1.0.9-2 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-4 libc-bin_2.31-4+rpi1 libc-dev-bin_2.31-4+rpi1 libc6_2.31-4+rpi1 libc6-dev_2.31-4+rpi1 libcap-ng0_0.7.9-2.2 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_10.2.0-16+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-2+rpi1 libctf0_2.35.1-2+rpi1 libcwidget4_0.5.18-5 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.254 libdebhelper-perl_13.2.1 libdpkg-perl_1.20.5+rpi1 libelf1_0.181-1 libexpat1_2.2.10-1 libexpat1-dev_2.2.10-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1 libfdisk1_2.36-3 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.9.0-1 libfreetype6_2.10.2+dfsg-4 libgcc-10-dev_10.2.0-16+rpi1 libgcc-s1_10.2.0-16+rpi1 libgcrypt20_1.8.6-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgfortran5_10.2.0-16+rpi1 libglib2.0-0_2.66.2-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-4 libgomp1_10.2.0-16+rpi1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10+b3 libhdf5-103-1_1.10.6+repack-2 libhdf5-hl-100_1.10.6+repack-2 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-1 libimagequant0_2.12.2-1.1 libisl22_0.22.1-1 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:2.0.5-1.1 libjs-jquery_3.5.1+dfsg+~3.5.4-1 libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2 libjs-jquery-isonscreen_1.2.0-1 libjs-jquery-metadata_12-1.1 libjs-jquery-tablesorter_1:2.31.3+dfsg1-1 libjs-jquery-throttle-debounce_1.1+dfsg.1-1 libjs-jquery-ui_1.12.1+dfsg-7 libjs-sphinxdoc_3.2.1-2 libjs-underscore_1.9.1~dfsg-1 libk5crypto3_1.17-10+b3 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10+b3 libkrb5support0_1.17-10+b3 libksba8_1.4.0-2 liblapack3_3.9.0-3 liblbfgsb0_3.0+dfsg.3-9 liblcms2-2_2.9-4 libldap-2.4-2_2.4.53+dfsg-1+rpi1 libldap-common_2.4.53+dfsg-1+rpi1 liblocale-gettext-perl_1.07-4 liblz4-1_1.9.2-2 liblzf1_3.6-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncursesw6_6.2+20200918-1 libnettle8_3.6-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libp11-kit0_0.23.21-2 libpam-cap_1:2.44-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libpng16-16_1.6.37-3 libpython3-all-dev_3.8.6-1 libpython3-dev_3.8.6-1 libpython3-stdlib_3.8.6-1 libpython3.8_3.8.6-1 libpython3.8-dev_3.8.6-1 libpython3.8-minimal_3.8.6-1 libpython3.8-stdlib_3.8.6-1 libpython3.9_3.9.0-5+rpi1 libpython3.9-dev_3.9.0-5+rpi1 libpython3.9-minimal_3.9.0-5+rpi1 libpython3.9-stdlib_3.9.0-5+rpi1 libreadline8_8.0-4 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.4-1+rpi1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigc++-2.0-0v5_2.10.4-2 libsigsegv2_2.12-2 libsmartcols1_2.36-3 libsqlite3-0_3.33.0-1 libss2_1.45.6-1 libssl1.1_1.1.1g-1 libstdc++-10-dev_10.2.0-16+rpi1 libstdc++6_10.2.0-16+rpi1 libsub-override-perl_0.09-2 libsystemd0_246.4-1+rpi1 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libtiff5_4.1.0+git191117-2 libtinfo6_6.2+20200918-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libubsan1_10.2.0-16+rpi1 libuchardet0_0.0.7-1 libudev1_246.4-1+rpi1 libunistring2_0.9.10-4 libuuid1_2.36-3 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libxapian30_1.4.17-1 libxau6_1:1.0.8-1+b2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxml2_2.9.10+dfsg-6.1 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.7.10-1+rpi1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mime-support_3.64 mount_2.36-3 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 netbase_6.2 node-jquery_3.5.1+dfsg+~3.5.4-1 openssl_1.1.1h-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4 po-debconf_1.0.21 python-babel-localedata_2.8.0+dfsg.1-4 python-matplotlib-data_3.3.2-2 python3_3.8.6-1 python3-alabaster_0.7.8-1.1 python3-all_3.8.6-1 python3-all-dev_3.8.6-1 python3-atomicwrites_1.4.0-1 python3-attr_20.1.0-1 python3-babel_2.8.0+dfsg.1-4 python3-certifi_2020.6.20-1 python3-chardet_3.0.4-7 python3-click_7.1.2-1 python3-colorama_0.4.3-1 python3-cov-core_1.15.0-3 python3-coverage_5.1+dfsg.1-2 python3-cycler_0.10.0-3 python3-dateutil_2.8.1-4 python3-decorator_4.4.2-2 python3-dev_3.8.6-1 python3-distutils_3.8.6-1 python3-docutils_0.16+dfsg-3 python3-future_0.18.2-4 python3-h5py_2.10.0-9 python3-h5py-serial_2.10.0-9 python3-idna_2.10-1 python3-imagesize_1.2.0-2 python3-importlib-metadata_1.6.0-2 python3-jinja2_2.11.2-1 python3-kiwisolver_1.2.0-1 python3-lib2to3_3.8.6-1 python3-markupsafe_1.1.1-1 python3-matplotlib_3.3.2-2 python3-minimal_3.8.6-1 python3-more-itertools_4.2.0-3 python3-nose_1.3.7-7 python3-nose2_0.9.2-1 python3-numpy_1:1.19.4-1 python3-packaging_20.4-1 python3-pandas_1.1.4+dfsg-1 python3-pandas-lib_1.1.4+dfsg-1 python3-pil_8.0.1-1 python3-pkg-resources_50.3.0-1 python3-pluggy_0.13.0-5 python3-py_1.9.0-1 python3-pygments_2.3.1+dfsg-4 python3-pyparsing_2.4.7-1 python3-pytest_4.6.11-1 python3-pytest-cov_2.8.1-1 python3-requests_2.24.0+dfsg-1 python3-roman_2.0.0-5 python3-scipy_1.5.2-2 python3-setuptools_50.3.0-1 python3-six_1.15.0-1 python3-snowballstemmer_2.0.0-2 python3-sphinx_3.2.1-2 python3-tz_2020.1-2 python3-urllib3_1.25.9-1 python3-wcwidth_0.1.9+dfsg1-2 python3-zipp_1.0.0-3 python3.8_3.8.6-1 python3.8-dev_3.8.6-1 python3.8-minimal_3.8.6-1 python3.9_3.9.0-5+rpi1 python3.9-dev_3.9.0-5+rpi1 python3.9-minimal_3.9.0-5+rpi1 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-biom-format-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sgml-base_1.30 sphinx-common_3.2.1-2 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 ttf-bitstream-vera_1.10-8 tzdata_2020d-1 util-linux_2.36-3 xml-core_0.18+nmu1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.Leoo09Df/trustedkeys.kbx': General error
gpgv: Signature made Tue Nov 10 09:43:46 2020 UTC
gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./python-biom-format_2.1.9-2.dsc
dpkg-source: info: extracting python-biom-format in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking python-biom-format_2.1.9.orig.tar.xz
dpkg-source: info: unpacking python-biom-format_2.1.9-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying ignore_local_dist-packages.patch
dpkg-source: info: applying no-web-adds.patch
dpkg-source: info: applying fix_future_import.patch
dpkg-source: info: applying enable_sloppy_sphinx_build.patch
dpkg-source: info: applying sphinx_1.6.patch
dpkg-source: info: applying sphinx.ext.pngmath.patch
dpkg-source: info: applying posix_shell.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-a392e4b3-e558-4583-8a5c-e81c3b5ccbb5
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package python-biom-format
dpkg-buildpackage: info: source version 2.1.9-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --with python3,bash-completion,sphinxdoc --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
install -d /<<PKGBUILDDIR>>/debian/.debhelper/generated/_source/home
pybuild --clean --test-pytest -i python{version} -p "3.9 3.8"
I: pybuild base:232: python3.9 setup.py clean
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 22, in <module>
from . import multiarray
File "/usr/lib/python3/dist-packages/numpy/core/multiarray.py", line 12, in <module>
from . import overrides
File "/usr/lib/python3/dist-packages/numpy/core/overrides.py", line 7, in <module>
from numpy.core._multiarray_umath import (
ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/<<PKGBUILDDIR>>/setup.py", line 17, in <module>
import numpy as np
File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 140, in <module>
from . import core
File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 48, in <module>
raise ImportError(msg)
ImportError:
IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!
Importing the numpy C-extensions failed. This error can happen for
many reasons, often due to issues with your setup or how NumPy was
installed.
We have compiled some common reasons and troubleshooting tips at:
https://numpy.org/devdocs/user/troubleshooting-importerror.html
Please note and check the following:
* The Python version is: Python3.9 from "/usr/bin/python3.9"
* The NumPy version is: "1.19.4"
and make sure that they are the versions you expect.
Please carefully study the documentation linked above for further help.
Original error was: No module named 'numpy.core._multiarray_umath'
E: pybuild pybuild:353: clean: plugin distutils failed with: exit code=1: python3.9 setup.py clean
dh_auto_clean: error: pybuild --clean --test-pytest -i python{version} -p "3.9 3.8" returned exit code 13
make: *** [debian/rules:19: clean] Error 25
dpkg-buildpackage: error: debian/rules clean subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2020-11-12T07:39:30Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 51812
Build-Time: 3
Distribution: bullseye-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 914
Job: python-biom-format_2.1.9-2
Machine Architecture: armhf
Package: python-biom-format
Package-Time: 940
Source-Version: 2.1.9-2
Space: 51812
Status: attempted
Version: 2.1.9-2
--------------------------------------------------------------------------------
Finished at 2020-11-12T07:39:30Z
Build needed 00:15:40, 51812k disk space