Build log for python-biom-format (2.1.8+dfsg-3) on armhf

python-biom-format → 2.1.8+dfsg-3 → armhf → 2020-07-21 12:20:09

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd

+==============================================================================+
| python-biom-format 2.1.8+dfsg-3 (armhf)      Tue, 21 Jul 2020 11:59:03 +0000 |
+==============================================================================+

Package: python-biom-format
Version: 2.1.8+dfsg-3
Source Version: 2.1.8+dfsg-3
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-dd490fb9-3233-4415-af69-5b5ebe51de3d' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.8 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
Fetched 24.7 MB in 29s (836 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'python-biom-format' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-biom-format.git
Please use:
git clone https://salsa.debian.org/med-team/python-biom-format.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 8541 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main python-biom-format 2.1.8+dfsg-3 (dsc) [2570 B]
Get:2 http://172.17.0.1/private bullseye-staging/main python-biom-format 2.1.8+dfsg-3 (tar) [8528 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main python-biom-format 2.1.8+dfsg-3 (diff) [10.4 kB]
Fetched 8541 kB in 3s (2549 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/python-biom-format-4Tuu5i/python-biom-format-2.1.8+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-biom-format-4Tuu5i' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-3fhYp4/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-3fhYp4/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-3fhYp4/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (2803 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  bsdextrautils netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 20 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (19.5 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12289 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any-amd64 any-arm64 any-i386 any-mips64el any-ppc64el armel armhf mipsel all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib
Filtered Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib
dpkg-deb: building package 'sbuild-build-depends-python-biom-format-dummy' in '/<<BUILDDIR>>/resolver-3fhYp4/apt_archive/sbuild-build-depends-python-biom-format-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-python-biom-format-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ Sources [588 B]
Get:5 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ Packages [671 B]
Fetched 2592 B in 1s (3488 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install python-biom-format build dependencies (apt-based resolver)
------------------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  dmsetup libargon2-1 libcryptsetup12 libdevmapper1.02.1 libjson-c4 netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bash-completion ca-certificates
  cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism
  docutils-common dwz file fonts-lyx gettext gettext-base groff-base help2man
  intltool-debian libaec0 libarchive-zip-perl libblas3 libbrotli1 libcroco3
  libdebhelper-perl libelf1 libexpat1 libexpat1-dev
  libfile-stripnondeterminism-perl libfreetype6 libgfortran5 libglib2.0-0
  libhdf5-103-1 libhdf5-hl-100 libicu67 libjs-jquery libjs-jquery-ui
  libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblzf1 libmagic-mgc
  libmagic1 libmount1 libmpdec2 libpipeline1 libpng16-16 libpython3-all-dev
  libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev
  libpython3.8-minimal libpython3.8-stdlib libsigsegv2 libsub-override-perl
  libsz2 libtool libuchardet0 libxml2 m4 man-db mime-support node-jquery
  openssl po-debconf python-babel-localedata python-matplotlib-data python3
  python3-alabaster python3-all python3-all-dev python3-babel python3-certifi
  python3-chardet python3-click python3-colorama python3-cycler
  python3-dateutil python3-decorator python3-dev python3-distutils
  python3-docutils python3-future python3-h5py python3-h5py-serial
  python3-idna python3-imagesize python3-jinja2 python3-kiwisolver
  python3-lib2to3 python3-markupsafe python3-matplotlib python3-minimal
  python3-nose python3-numpy python3-packaging python3-pandas
  python3-pandas-lib python3-pkg-resources python3-pygments python3-pyparsing
  python3-requests python3-roman python3-scipy python3-setuptools python3-six
  python3-sphinx python3-tz python3-urllib3 python3.8 python3.8-dev
  python3.8-minimal sensible-utils sgml-base sphinx-common ttf-bitstream-vera
  xml-core zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc cython-doc dh-make gettext-doc
  libasprintf-dev libgettextpo-dev groff libjs-jquery-ui-docs libtool-doc
  gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
  libmail-box-perl python3-doc python3-tk python3-venv python-cycler-doc
  docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french
  texlive-latex-base texlive-latex-recommended python-future-doc
  python-h5py-doc python-jinja2-doc dvipng ffmpeg ghostscript gir1.2-gtk-3.0
  inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi
  python3-gi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip
  python3-tornado texlive-extra-utils texlive-latex-extra ttf-staypuft
  python-nose-doc gfortran python-numpy-doc python3-pytest python3-numpy-dbg
  python-pandas-doc python3-statsmodels python-pygments-doc
  python-pyparsing-doc python3-cryptography python3-openssl python3-socks
  python-requests-doc python-scipy-doc python-setuptools-doc
  fonts-freefont-otf imagemagick-6.q16 latexmk libjs-mathjax
  python3-sphinx-rtd-theme python3-stemmer sphinx-doc
  texlive-fonts-recommended texlive-plain-generic python3.8-venv python3.8-doc
  binfmt-support sgml-base-doc
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
  xdg-user-dirs javascript-common libltdl-dev libmail-sendmail-perl
  libpaper-utils python3-pil python3-tk python3-numexpr python3-tables
  python3-xlrd python3-openpyxl python3-xlwt python3-bs4 python3-html5lib
  python3-lxml
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bash-completion ca-certificates
  cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism
  docutils-common dwz file fonts-lyx gettext gettext-base groff-base help2man
  intltool-debian libaec0 libarchive-zip-perl libblas3 libbrotli1 libcroco3
  libdebhelper-perl libelf1 libexpat1 libexpat1-dev
  libfile-stripnondeterminism-perl libfreetype6 libgfortran5 libglib2.0-0
  libhdf5-103-1 libhdf5-hl-100 libicu67 libjs-jquery libjs-jquery-ui
  libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblzf1 libmagic-mgc
  libmagic1 libmpdec2 libpipeline1 libpng16-16 libpython3-all-dev
  libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev
  libpython3.8-minimal libpython3.8-stdlib libsigsegv2 libsub-override-perl
  libsz2 libtool libuchardet0 libxml2 m4 man-db mime-support node-jquery
  openssl po-debconf python-babel-localedata python-matplotlib-data python3
  python3-alabaster python3-all python3-all-dev python3-babel python3-certifi
  python3-chardet python3-click python3-colorama python3-cycler
  python3-dateutil python3-decorator python3-dev python3-distutils
  python3-docutils python3-future python3-h5py python3-h5py-serial
  python3-idna python3-imagesize python3-jinja2 python3-kiwisolver
  python3-lib2to3 python3-markupsafe python3-matplotlib python3-minimal
  python3-nose python3-numpy python3-packaging python3-pandas
  python3-pandas-lib python3-pkg-resources python3-pygments python3-pyparsing
  python3-requests python3-roman python3-scipy python3-setuptools python3-six
  python3-sphinx python3-tz python3-urllib3 python3.8 python3.8-dev
  python3.8-minimal sbuild-build-depends-python-biom-format-dummy
  sensible-utils sgml-base sphinx-common ttf-bitstream-vera xml-core
  zlib1g-dev
The following packages will be upgraded:
  libmount1
1 upgraded, 121 newly installed, 0 to remove and 19 not upgraded.
Need to get 75.5 MB of archives.
After this operation, 307 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-3fhYp4/apt_archive ./ sbuild-build-depends-python-biom-format-dummy 0.invalid.0 [956 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-minimal armhf 3.8.4-1 [752 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf python3.8-minimal armhf 3.8.4-1 [1627 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.8.2-3 [37.6 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.64 [37.8 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libmpdec2 armhf 2.4.2-3 [68.1 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-stdlib armhf 3.8.4-1 [1599 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf python3.8 armhf 3.8.4-1 [420 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.8.2-3 [20.8 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.8.2-3 [63.7 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf sgml-base all 1.30 [15.1 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libmount1 armhf 2.35.2-7 [190 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf bash-completion all 1:2.10-1 [228 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-3 [801 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1g-1 [811 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20200601 [158 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf cython3 armhf 0.29.14-2 [1398 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.2 [187 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.4-1 [1159 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-3 [8287 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-5+b1 [593 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2 [1007 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.3-2 [76.8 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.3-2 [143 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20200315 [91.6 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf xml-core all 0.18+nmu1 [23.8 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf docutils-common all 0.16+dfsg-2 [129 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf fonts-lyx all 2.3.5.2-1 [200 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf help2man armhf 1.47.16 [181 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libaec0 armhf 1.0.4-1 [20.0 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-2 [108 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-7 [258 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.9-1 [119 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-2 [274 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.2+dfsg-2 [346 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.1.0-4+rpi1 [231 kB]
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Get:65 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-103-1 armhf 1.10.6+repack-2 [1184 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-hl-100 armhf 1.10.6+repack-2 [78.1 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf node-jquery all 3.5.1+dfsg-4 [309 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.5.1+dfsg-4 [3612 B]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libjs-underscore all 1.9.1~dfsg-1 [99.4 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libjs-sphinxdoc all 2.4.3-4 [110 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-2 [1602 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.3-8 [25.5 kB]
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Get:75 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8 armhf 3.8.4-1 [1363 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-dev armhf 3.8.4-1 [3056 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.8.2-3 [21.0 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libpython3-all-dev armhf 3.8.2-3 [1068 B]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf python-babel-localedata all 2.8.0+dfsg.1-3 [4998 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf ttf-bitstream-vera all 1.10-8 [352 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf python-matplotlib-data all 3.2.2-1 [4146 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf python3-alabaster all 0.7.8-1.1 [18.6 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf python3-all armhf 3.8.2-3 [1056 B]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf python3.8-dev armhf 3.8.4-1 [515 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.8.2-3 [1164 B]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf python3-all-dev armhf 3.8.2-3 [1064 B]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 46.1.3-1 [183 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf python3-tz all 2020.1-2 [34.6 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf python3-babel all 2.8.0+dfsg.1-3 [99.8 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf python3-certifi all 2020.4.5.1-1 [151 kB]
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Get:94 http://172.17.0.1/private bullseye-staging/main armhf python3-click all 7.0-3 [73.8 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf python3-six all 1.15.0-1 [16.8 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf python3-cycler all 0.10.0-3 [8084 B]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf python3-dateutil all 2.8.1-4 [81.6 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf python3-decorator all 4.4.2-2 [15.8 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf python3-roman all 2.0.0-4 [8972 B]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf python3-docutils all 0.16+dfsg-2 [383 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf python3-future all 0.18.2-2 [348 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf python3-numpy armhf 1:1.18.4-1 [3037 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf python3-h5py-serial armhf 2.10.0-8 [732 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf python3-h5py all 2.10.0-8 [11.4 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf python3-idna all 2.10-1 [37.4 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf python3-imagesize all 1.2.0-2 [5824 B]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf python3-markupsafe armhf 1.1.1-1 [15.0 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf python3-jinja2 all 2.11.2-1 [113 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf python3-kiwisolver armhf 1.0.1-3 [245 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf python3-pyparsing all 2.4.7-1 [109 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf python3-matplotlib armhf 3.2.2-1 [4620 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf python3-nose all 1.3.7-6 [133 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf python3-packaging all 20.3-1.2 [29.9 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas-lib armhf 0.25.3+dfsg2-3+rpi1 [3840 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas all 0.25.3+dfsg2-3+rpi1 [1984 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf python3-pygments all 2.3.1+dfsg-4 [596 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf python3-urllib3 all 1.25.9-1 [105 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf python3-requests all 2.23.0+dfsg-2 [71.4 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf python3-scipy armhf 1.4.1-2 [10.4 MB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf python3-setuptools all 46.1.3-1 [382 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf sphinx-common all 2.4.3-4 [550 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf python3-sphinx all 2.4.3-4 [502 kB]
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No schema files found: doing nothing.
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Setting up gettext-base (0.19.8.1-10) ...
Setting up file (1:5.38-5) ...
Setting up libaec0:armhf (1.0.4-1) ...
Setting up python-babel-localedata (2.8.0+dfsg.1-3) ...
Setting up help2man (1.47.16) ...
Setting up autotools-dev (20180224.1) ...
Setting up libblas3:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libexpat1-dev:armhf (2.2.9-1) ...
Setting up bash-completion (1:2.10-1) ...
Setting up liblzf1:armhf (3.6-2) ...
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Setting up libpng16-16:armhf (1.6.37-2) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libgfortran5:armhf (10.1.0-4+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up sgml-base (1.30) ...
Setting up libmpdec2:armhf (2.4.2-3) ...
Setting up libpython3.8-stdlib:armhf (3.8.4-1) ...
Setting up python3.8 (3.8.4-1) ...
Setting up python-matplotlib-data (3.2.2-1) ...
Setting up openssl (1.1.1g-1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libxml2:armhf (2.9.10+dfsg-5+b1) ...
Setting up node-jquery (3.5.1+dfsg-4) ...
Setting up libsz2:armhf (1.0.4-1) ...
Setting up libpython3-stdlib:armhf (3.8.2-3) ...
Setting up libjs-underscore (1.9.1~dfsg-1) ...
Setting up libfile-stripnondeterminism-perl (1.9.0-1) ...
Setting up liblapack3:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libtool (2.4.6-14) ...
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Setting up python3-tz (2020.1-2) ...
Setting up python3-six (1.15.0-1) ...
Setting up ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
126 added, 0 removed; done.
Setting up python3-roman (2.0.0-4) ...
Setting up python3-decorator (4.4.2-2) ...
Setting up python3-jinja2 (2.11.2-1) ...
Setting up python3-pyparsing (2.4.7-1) ...
Setting up libfreetype6:armhf (2.10.2+dfsg-2) ...
Setting up python3-certifi (2020.4.5.1-1) ...
Setting up libpython3.8:armhf (3.8.4-1) ...
Setting up python3-cycler (0.10.0-3) ...
Setting up python3-idna (2.10-1) ...
Setting up cython3 (0.29.14-2) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11.1) ...
Setting up python3-urllib3 (1.25.9-1) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up libhdf5-103-1:armhf (1.10.6+repack-2) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up xml-core (0.18+nmu1) ...
Setting up python3-dateutil (2.8.1-4) ...
Setting up libjs-jquery (3.5.1+dfsg-4) ...
Setting up python3-lib2to3 (3.8.3-2) ...
Setting up liblbfgsb0:armhf (3.0+dfsg.3-8) ...
Setting up python3-imagesize (1.2.0-2) ...
Setting up libhdf5-hl-100:armhf (1.10.6+repack-2) ...
Setting up python3-pkg-resources (46.1.3-1) ...
Setting up automake (1:1.16.2-3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up python3-distutils (3.8.3-2) ...
Setting up dh-python (4.20200315) ...
Setting up gettext (0.19.8.1-10) ...
Setting up python3-setuptools (46.1.3-1) ...
Setting up python3-babel (2.8.0+dfsg.1-3) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python3-colorama (0.4.3-1) ...
Setting up python3-alabaster (0.7.8-1.1) ...
Setting up python3-all (3.8.2-3) ...
Setting up python3-click (7.0-3) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-nose (1.3.7-6) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up python3-pygments (2.3.1+dfsg-4) ...
Setting up python3-packaging (20.3-1.2) ...
Setting up python3-chardet (3.0.4-7) ...
Setting up libjs-jquery-ui (1.12.1+dfsg-5) ...
Setting up libpython3.8-dev:armhf (3.8.4-1) ...
Setting up python3-requests (2.23.0+dfsg-2) ...
Setting up python3-kiwisolver (1.0.1-3) ...
Setting up python3-numpy (1:1.18.4-1) ...
Setting up libjs-sphinxdoc (2.4.3-4) ...
Setting up python3.8-dev (3.8.4-1) ...
Setting up python3-future (0.18.2-2) ...
update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode
update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode
Setting up python3-matplotlib (3.2.2-1) ...
Setting up python3-scipy (1.4.1-2) ...
Setting up libpython3-dev:armhf (3.8.2-3) ...
Setting up po-debconf (1.0.21) ...
Setting up python3-pandas-lib (0.25.3+dfsg2-3+rpi1) ...
Setting up python3-h5py-serial (2.10.0-8) ...
Setting up python3-pandas (0.25.3+dfsg2-3+rpi1) ...
Setting up libpython3-all-dev:armhf (3.8.2-3) ...
Setting up sphinx-common (2.4.3-4) ...
Setting up python3-dev (3.8.2-3) ...
Setting up python3-h5py (2.10.0-8) ...
Setting up python3-all-dev (3.8.2-3) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.2) ...
Processing triggers for libc-bin (2.30-8+rpi1) ...
Processing triggers for sgml-base (1.30) ...
Setting up docutils-common (0.16+dfsg-2) ...
Processing triggers for sgml-base (1.30) ...
Setting up python3-docutils (0.16+dfsg-2) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-sphinx (2.4.3-4) ...
Setting up sbuild-build-depends-python-biom-format-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.34-8+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-14+rpi1 gcc-9_9.3.0-14+rpi1 libc6-dev_2.30-8+rpi1 libstdc++-9-dev_9.3.0-14+rpi1 libstdc++6_10.1.0-4+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_2.1.6 autoconf_2.69-11.1 automake_1:1.16.2-3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 bash-completion_1:2.10-1 binutils_2.34-8+rpi1 binutils-arm-linux-gnueabihf_2.34-8+rpi1 binutils-common_2.34-8+rpi1 bsdextrautils_2.35.2-6 bsdutils_1:2.35.2-6 build-essential_12.8 bzip2_1.0.8-3 ca-certificates_20200601 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-14+rpi1 cython3_0.29.14-2 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2 debianutils_4.9.1 dh-autoreconf_19 dh-python_4.20200315 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dmsetup_2:1.02.167-1+b2 docutils-common_0.16+dfsg-2 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 file_1:5.38-5 findutils_4.7.0-1 fonts-lyx_2.3.5.2-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-14+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10.1.0-4+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-6+rpi1 gcc-8-base_8.4.0-4+rpi1 gcc-9_9.3.0-14+rpi1 gcc-9-base_9.3.0-14+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 help2man_1.47.16 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libaec0_1.0.4-1 libapt-pkg6.0_2.1.6 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2 libasan5_9.3.0-14+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.1.0-4+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-8+rpi1 libblas3_3.9.0-2 libblkid1_2.35.2-6 libbrotli1_1.0.7-7 libbz2-1.0_1.0.8-3 libc-bin_2.30-8+rpi1 libc-dev-bin_2.30-8+rpi1 libc6_2.30-8+rpi1 libc6-dev_2.30-8+rpi1 libcap-ng0_0.7.9-2.2 libcc1-0_10.1.0-4+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libcryptsetup12_2:2.3.3-1 libctf-nobfd0_2.34-8+rpi1 libctf0_2.34-8+rpi1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.252 libdebhelper-perl_13.2 libdevmapper1.02.1_2:1.02.167-1+b2 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.9-1 libexpat1-dev_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.9.0-1 libfreetype6_2.10.2+dfsg-2 libgcc-9-dev_9.3.0-14+rpi1 libgcc-s1_10.1.0-4+rpi1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_10.1.0-4+rpi1 libglib2.0-0_2.64.4-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.14-2 libgomp1_10.1.0-4+rpi1 libgpg-error0_1.38-2 libhdf5-103-1_1.10.6+repack-2 libhdf5-hl-100_1.10.6+repack-2 libhogweed5_3.5.1+really3.5.1-2 libicu67_67.1-3 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libjs-jquery_3.5.1+dfsg-4 libjs-jquery-ui_1.12.1+dfsg-5 libjs-sphinxdoc_2.4.3-4 libjs-underscore_1.9.1~dfsg-1 libjson-c4_0.13.1+dfsg-9 libksba8_1.4.0-2 liblapack3_3.9.0-2 liblbfgsb0_3.0+dfsg.3-8 libldap-2.4-2_2.4.50+dfsg-1 libldap-common_2.4.50+dfsg-1 liblocale-gettext-perl_1.07-4 liblz4-1_1.9.2-2 liblzf1_3.6-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.2-7 libmpc3_1.1.0-1 libmpdec2_2.4.2-3 libmpfr6_4.0.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnpth0_1.6-2 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.2-2 libpng16-16_1.6.37-2 libpython3-all-dev_3.8.2-3 libpython3-dev_3.8.2-3 libpython3-stdlib_3.8.2-3 libpython3.8_3.8.4-1 libpython3.8-dev_3.8.4-1 libpython3.8-minimal_3.8.4-1 libpython3.8-stdlib_3.8.4-1 libreadline8_8.0-4 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.0-1+b1 libsemanage-common_3.0-1 libsemanage1_3.0-1+b1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.35.2-6 libsqlite3-0_3.32.3-1 libss2_1.45.6-1 libssl1.1_1.1.1g-1 libstdc++-9-dev_9.3.0-14+rpi1 libstdc++6_10.1.0-4+rpi1 libsub-override-perl_0.09-2 libsystemd0_245.6-2+rpi1 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libtext-charwidth-perl_0.04-10 libtext-iconv-perl_1.7-7 libtinfo6_6.2-1 libtool_2.4.6-14 libubsan1_10.1.0-4+rpi1 libuchardet0_0.0.7-1 libudev1_245.6-2+rpi1 libunistring2_0.9.10-4 libuuid1_2.35.2-6 libxml2_2.9.10+dfsg-5+b1 libzstd1_1.4.5+dfsg-3+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-2 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mime-support_3.64 mount_2.35.2-6 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 node-jquery_3.5.1+dfsg-4 openssl_1.1.1g-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4 po-debconf_1.0.21 python-babel-localedata_2.8.0+dfsg.1-3 python-matplotlib-data_3.2.2-1 python3_3.8.2-3 python3-alabaster_0.7.8-1.1 python3-all_3.8.2-3 python3-all-dev_3.8.2-3 python3-babel_2.8.0+dfsg.1-3 python3-certifi_2020.4.5.1-1 python3-chardet_3.0.4-7 python3-click_7.0-3 python3-colorama_0.4.3-1 python3-cycler_0.10.0-3 python3-dateutil_2.8.1-4 python3-decorator_4.4.2-2 python3-dev_3.8.2-3 python3-distutils_3.8.3-2 python3-docutils_0.16+dfsg-2 python3-future_0.18.2-2 python3-h5py_2.10.0-8 python3-h5py-serial_2.10.0-8 python3-idna_2.10-1 python3-imagesize_1.2.0-2 python3-jinja2_2.11.2-1 python3-kiwisolver_1.0.1-3 python3-lib2to3_3.8.3-2 python3-markupsafe_1.1.1-1 python3-matplotlib_3.2.2-1 python3-minimal_3.8.2-3 python3-nose_1.3.7-6 python3-numpy_1:1.18.4-1 python3-packaging_20.3-1.2 python3-pandas_0.25.3+dfsg2-3+rpi1 python3-pandas-lib_0.25.3+dfsg2-3+rpi1 python3-pkg-resources_46.1.3-1 python3-pygments_2.3.1+dfsg-4 python3-pyparsing_2.4.7-1 python3-requests_2.23.0+dfsg-2 python3-roman_2.0.0-4 python3-scipy_1.4.1-2 python3-setuptools_46.1.3-1 python3-six_1.15.0-1 python3-sphinx_2.4.3-4 python3-tz_2020.1-2 python3-urllib3_1.25.9-1 python3.8_3.8.4-1 python3.8-dev_3.8.4-1 python3.8-minimal_3.8.4-1 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-biom-format-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sgml-base_1.30 sphinx-common_2.4.3-4 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 ttf-bitstream-vera_1.10-8 tzdata_2020a-1 util-linux_2.35.2-6 xml-core_0.18+nmu1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Sun Jul 19 11:49:20 2020 UTC
gpgv:                using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1
gpgv:                issuer "npatra974@gmail.com"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./python-biom-format_2.1.8+dfsg-3.dsc
dpkg-source: info: extracting python-biom-format in /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg
dpkg-source: info: unpacking python-biom-format_2.1.8+dfsg.orig.tar.xz
dpkg-source: info: unpacking python-biom-format_2.1.8+dfsg-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying ignore_local_dist-packages.patch
dpkg-source: info: applying no-web-adds.patch
dpkg-source: info: applying fix_future_import.patch
dpkg-source: info: applying enable_sloppy_sphinx_build.patch
dpkg-source: info: applying sphinx_1.6.patch
dpkg-source: info: applying sphinx.ext.pngmath.patch
dpkg-source: info: applying posix_shell.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-dd490fb9-3233-4415-af69-5b5ebe51de3d
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package python-biom-format
dpkg-buildpackage: info: source version 2.1.8+dfsg-3
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --with python3,bash-completion,sphinxdoc --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
	install -d /<<BUILDDIR>>/python-biom-format-2.1.8\+dfsg/debian/.debhelper/generated/_source/home
	pybuild --clean --test-nose -i python{version} -p 3.8
I: pybuild base:217: python3.8 setup.py clean 
Compiling biom/_filter.pyx because it changed.
Compiling biom/_transform.pyx because it changed.
Compiling biom/_subsample.pyx because it changed.
[1/3] Cythonizing biom/_filter.pyx
[2/3] Cythonizing biom/_subsample.pyx
[3/3] Cythonizing biom/_transform.pyx
running clean
removing '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build' (and everything under it)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_filter.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_subsample.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_transform.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.8' does not exist -- can't clean it
	rm -rf .pybuild/
	find . -name \*.pyc -exec rm {} \;
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
	rm -f debian/debhelper-build-stamp
	rm -rf debian/.debhelper/
	rm -f -- debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars ./biom/_filter.c ./biom/_subsample.c ./biom/_transform.c debian/files
	rm -fr -- debian/python3-biom-format/ debian/tmp/ debian/python-biom-format-doc/
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
 debian/rules binary-arch
dh binary-arch --with python3,bash-completion,sphinxdoc --buildsystem=pybuild
   dh_update_autotools_config -a -O--buildsystem=pybuild
   dh_autoreconf -a -O--buildsystem=pybuild
   dh_auto_configure -a -O--buildsystem=pybuild
	install -d /<<BUILDDIR>>/python-biom-format-2.1.8\+dfsg/debian/.debhelper/generated/_source/home
	pybuild --configure --test-nose -i python{version} -p 3.8
I: pybuild base:217: python3.8 setup.py config 
Compiling biom/_filter.pyx because it changed.
Compiling biom/_transform.pyx because it changed.
Compiling biom/_subsample.pyx because it changed.
[1/3] Cythonizing biom/_filter.pyx
[2/3] Cythonizing biom/_subsample.pyx
[3/3] Cythonizing biom/_transform.pyx
running config
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_filter.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_subsample.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_transform.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
# arch
USE_CYTHON=true dh_auto_build
	pybuild --build --test-nose -i python{version} -p 3.8
I: pybuild base:217: /usr/bin/python3 setup.py build 
running build
running build_py
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/exception.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/installation_informer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/metadata_adder.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/metadata_exporter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_head.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_ids.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_subsetter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_summarizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_validator.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/long_lines.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/test_err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/test_parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/test_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/test_util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_add_metadata.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_show_install_info.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_subset_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_summarize_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_validate_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
running egg_info
creating biom_format.egg-info
writing biom_format.egg-info/PKG-INFO
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing entry points to biom_format.egg-info/entry_points.txt
writing requirements to biom_format.egg-info/requires.txt
writing top-level names to biom_format.egg-info/top_level.txt
writing manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no directories found matching 'support_files'
warning: no directories found matching 'tests/test_data'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
writing manifest file 'biom_format.egg-info/SOURCES.txt'
copying biom/_filter.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/_filter.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/_subsample.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/_subsample.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/_transform.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/_transform.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/assets
copying biom/assets/exercise_api.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/assets
copying biom/assets/exercise_cli.sh -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/assets
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_data/bad_table.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/bad_table.txt.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/empty.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/no-contents.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
running build_ext
building 'biom._filter' extension
creating build
creating build/temp.linux-armhf-3.8
creating build/temp.linux-armhf-3.8/biom
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c biom/_filter.c -o build/temp.linux-armhf-3.8/biom/_filter.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from biom/_filter.c:617:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/biom/_filter.o -o /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_filter.cpython-38-arm-linux-gnueabihf.so
building 'biom._transform' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c biom/_transform.c -o build/temp.linux-armhf-3.8/biom/_transform.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from biom/_transform.c:617:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/biom/_transform.o -o /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_transform.cpython-38-arm-linux-gnueabihf.so
building 'biom._subsample' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c biom/_subsample.c -o build/temp.linux-armhf-3.8/biom/_subsample.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1832,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from biom/_subsample.c:617:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/biom/_subsample.o -o /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_subsample.cpython-38-arm-linux-gnueabihf.so
# indep:
PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b html doc build/html
Running Sphinx v2.4.3
making output directory... done
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
Failed to import 'biom': no module named biom
Failed to import 'biom.table': no module named biom.table
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 12 source files that are out of date
updating environment: [new config] 12 added, 0 changed, 0 removed
reading sources... [  8%] BIOM_LICENSE
reading sources... [ 16%] documentation/adding_metadata
reading sources... [ 25%] documentation/biom_conversion
reading sources... [ 33%] documentation/biom_format
reading sources... [ 41%] documentation/format_versions/biom-1.0
reading sources... [ 50%] documentation/format_versions/biom-2.0
reading sources... [ 58%] documentation/format_versions/biom-2.1
reading sources... [ 66%] documentation/index
reading sources... [ 75%] documentation/quick_usage_examples
reading sources... [ 83%] documentation/summarizing_biom_tables
reading sources... [ 91%] documentation/table_objects
reading sources... [100%] index

WARNING: autodoc: failed to import module 'biom'; the following exception was raised:
No module named 'biom._filter'
WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised:
No module named 'biom._filter'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
writing output... [  8%] BIOM_LICENSE
writing output... [ 16%] documentation/adding_metadata
writing output... [ 25%] documentation/biom_conversion
writing output... [ 33%] documentation/biom_format
writing output... [ 41%] documentation/format_versions/biom-1.0
writing output... [ 50%] documentation/format_versions/biom-2.0
writing output... [ 58%] documentation/format_versions/biom-2.1
writing output... [ 66%] documentation/index
writing output... [ 75%] documentation/quick_usage_examples
writing output... [ 83%] documentation/summarizing_biom_tables
writing output... [ 91%] documentation/table_objects
writing output... [100%] index

/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated
generating indices... done
writing additional pages...  searchdone
copying images... [100%] _static/biom-format.png

copying static files... ... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 6 warnings.

The HTML pages are in build/html.
PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b man doc build/man
Running Sphinx v2.4.3
making output directory... done
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
Failed to import 'biom': no module named biom
Failed to import 'biom.table': no module named biom.table
building [mo]: targets for 0 po files that are out of date
building [man]: all manpages
updating environment: [new config] 12 added, 0 changed, 0 removed
reading sources... [  8%] BIOM_LICENSE
reading sources... [ 16%] documentation/adding_metadata
reading sources... [ 25%] documentation/biom_conversion
reading sources... [ 33%] documentation/biom_format
reading sources... [ 41%] documentation/format_versions/biom-1.0
reading sources... [ 50%] documentation/format_versions/biom-2.0
reading sources... [ 58%] documentation/format_versions/biom-2.1
reading sources... [ 66%] documentation/index
reading sources... [ 75%] documentation/quick_usage_examples
reading sources... [ 83%] documentation/summarizing_biom_tables
reading sources... [ 91%] documentation/table_objects
reading sources... [100%] index

WARNING: autodoc: failed to import module 'biom'; the following exception was raised:
No module named 'biom._filter'
WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised:
No module named 'biom._filter'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/format_versions/biom-2.1 documentation/quick_usage_examples documentation/table_objects documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE } done
build succeeded, 2 warnings.

The manual pages are in build/man.
make[1]: Leaving directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
   dh_auto_test -a -O--buildsystem=pybuild
	pybuild --test --test-nose -i python{version} -p 3.8
I: pybuild pybuild:284: cp -r /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/examples /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build
I: pybuild base:217: cd /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build; python3.8 -m nose -v 
Correctly adds observation metadata without casting it. ... ok
Correctly adds observation metadata with casting. ... ok
Correctly adds sample metadata without casting it. ... ok
Correctly adds sample metadata with casting. ... ok
test_default (biom.tests.test_cli.test_show_install_info.TestShowInstallInfo) ... ok
Correctly raises politically correct error upon invalid input. ... ok
Correctly subsets observations in a table. ... ok
Correctly subsets samples in a hdf5 table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py:3980: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
  data = np.hstack(h5_data[start:end]
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py:3982: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
  indices = np.hstack(h5_indices[start:end]
ok
Correctly subsets samples in a table. ... ok
Correctly subsets samples in a hdf5 table ... ok
TableSummarizer functions as expected ... ok
TableSummarizer functions as expected with qualitative=True ... ok
Correctly converts biom to classic. ... ok
Correctly converts biom to classic with metadata renaming. ... ok
Correctly converts classic to biom. ... ok
Correctly converts classic to biom with metadata. ... ok
Correctly converts json to HDF5 changing the observation metadata ... ok
Correctly converts json to HDF5 changing the sample metadata ... ok
test_bad_inputs (biom.tests.test_cli.test_table_normalizer.TableNormalizerTests) ... ok
test_basic (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_basic_w_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_rep_set_missing_id (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_rep_set_no_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_uc (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_uc_w_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
Correctly invalidates a table that is... invalid. ... ok
Test an invalid HDF5 table ... ok
test_is_int (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok
Correctly validates a table that is indeed... valid. ... ok
validates table:columns: fields ... ok
validates data: fields ... ok
Make sure we have a datetime stamp ... ok
Takes a dense matrix field and validates ... ok
Should match format string ... ok
validates format url ... ok
Should have some string for generated by ... ok
Test a valid HDF5 table ... ok
test_valid_hdf5_metadata_v200 (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok
test_valid_hdf5_metadata_v210 (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok
Make sure we have a valid matrix type ... ok
Make sure we have a valid matrix type ... ok
Can be nullable or an object ... ok
Should just work. ... ok
validates rows: field ... ok
validates shape information ... ok
Takes a sparse matrix field and validates ... ok
Should be valid table type ... ok
test_test_empty (biom.tests.test_err.ErrModeTests) ... ok
test_test_obsdup (biom.tests.test_err.ErrModeTests) ... ok
test_test_obsmdsize (biom.tests.test_err.ErrModeTests) ... ok
test_test_obssize (biom.tests.test_err.ErrModeTests) ... ok
test_test_sampdup (biom.tests.test_err.ErrModeTests) ... ok
test_test_sampmdsize (biom.tests.test_err.ErrModeTests) ... ok
test_test_sampsize (biom.tests.test_err.ErrModeTests) ... ok
test_contains (biom.tests.test_err.ErrorProfileTests) ... ok
test_getcall (biom.tests.test_err.ErrorProfileTests) ... ok
test_handle_error (biom.tests.test_err.ErrorProfileTests) ... ok
test_register_unregister (biom.tests.test_err.ErrorProfileTests) ... ok
test_setcall (biom.tests.test_err.ErrorProfileTests) ... ok
test_state (biom.tests.test_err.ErrorProfileTests) ... ok
test_test (biom.tests.test_err.ErrorProfileTests) ... ok
test_test_evaluation_order (biom.tests.test_err.ErrorProfileTests) ... ok
test_errcheck (biom.tests.test_err.SupportTests) ... ok
test_errstate (biom.tests.test_err.SupportTests) ... ok
test_geterr (biom.tests.test_err.SupportTests) ... ok
test_geterrcall (biom.tests.test_err.SupportTests) ... ok
test_seterr (biom.tests.test_err.SupportTests) ... ok
test_seterrcall (biom.tests.test_err.SupportTests) ... ok
test_empty_metadata_inconsistent_handling (biom.tests.test_parse.ParseTests) ... ok
get a generatedby string ... ok
test_load_table_filepath (biom.tests.test_parse.ParseTests) ... ok
test_load_table_inmemory (biom.tests.test_parse.ParseTests) ... ok
test_load_table_inmemory_json (biom.tests.test_parse.ParseTests) ... ok
test_load_table_inmemory_stringio (biom.tests.test_parse.ParseTests) ... ok
MetadataMap functions as expected ... ok
MetadataMap functions as expected w user-provided header ... ok
MetadataMap functions as expected w process_fns ... ok
test the biom otu table parser ... ok
tests for parse_biom_table when we do not have h5py ... ok
Make sure we can parse a HDF5 table through the same loader ... ok
test the biom table parser subsetting ... ok
tests for parse_biom_table when we have h5py ... ok
empty uc file returns empty Table ... ok
invalid query sequence identifier detected ... ok
single library seed observed ... ok
single new seed observed ... ok
new and library seeds observed ... ok
multiple new seeds observed ... ok
sample id with underscores is correctly processed ... ok
Yield tables binned by observation metadata ... ok
Yield tables binned by sample metadata ... ok
test_collapse_median (biom.tests.test_table.SparseTableTests) ... ok
Collapse observations by arbitrary metadata ... ok
Collapse observations by arbitary metadata ... ok
Collapse observations by 1-M metadata using divide mode ... ok
Collapse observations by arbitary metadata ... ok
Collapse samples by arbitrary metadata ... ok
Collapse samples by arbitary metadata ... ok
Collapse samples by 1-M metadata using divide mode ... ok
Collapse samples by arbitary metadata ... ok
Should convert other to sparse type ... ok
test_copy_data (biom.tests.test_table.SparseTableTests) ... ok
test_copy_ids (biom.tests.test_table.SparseTableTests) ... ok
test_copy_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_data (biom.tests.test_table.SparseTableTests) ... ok
check equality between tables ... ok
test_data_sparse (biom.tests.test_table.SparseTableTests) ... ok
Print out self in a delimited form ... ok
sparse equality ... ok
Parses a classic table ... ok
test_extract_data_from_tsv_bad_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_extract_data_from_tsv_badvalue_complaint (biom.tests.test_table.SparseTableTests) ... ok
test_filter_general_observation (biom.tests.test_table.SparseTableTests) ... ok
test_filter_general_sample (biom.tests.test_table.SparseTableTests) ... ok
test_filter_id_state (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_id (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_invert (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_remove_everything (biom.tests.test_table.SparseTableTests) ... ok
test_filter_out_full_table (biom.tests.test_table.SparseTableTests) ... ok
test_filter_return_type (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_id (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_invert (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_remove_everything (biom.tests.test_table.SparseTableTests) ... ok
test_filter_table_with_zeros (biom.tests.test_table.SparseTableTests) ... ok
test_filter_using_list_of_ids (biom.tests.test_table.SparseTableTests) ... ok
test_from_json_issue_697 (biom.tests.test_table.SparseTableTests) ... ok
Test correctly computes density of table. ... ok
test_identify_bad_value (biom.tests.test_table.SparseTableTests) ... ok
Should iterate over samples ... ok
test_iter_data_dense (biom.tests.test_table.SparseTableTests) ... ok
test_iter_data_sparse (biom.tests.test_table.SparseTableTests) ... ok
Iterate over observations of sparse matrix ... ok
Iterates data by observations ... ok
Iterates data by observations from a single sample. ... ok
Iterates observations ... ok
Should iterate pairwise over samples ... ok
Should iterate pairwise over samples ... ok
Should iterate pairwise over samples ... ok
Should iterate pairwise over samples ... ok
Iterate over samples of sparse matrix ... ok
Iterates data by samples ... ok
Iterates data by samples with a single observation. ... ok
Iterates samples ... ok
Merge two tables ... ok
Return a list of nonzero positions ... ok
Returns nonzero counts over an axis ... ok
Returns nonzero counts over an axis ... ok
test_nonzero_csc_bug (biom.tests.test_table.SparseTableTests) ... ok
normalize observations by sample ... ok
normalize sample by observation ... ok
test_other_spmatrix_type (biom.tests.test_table.SparseTableTests) ... ok
test_pa (biom.tests.test_table.SparseTableTests) ... ok
test_pa_with_neg (biom.tests.test_table.SparseTableTests) ... ok
test_pa_works_if_something_has_been_zeroed (biom.tests.test_table.SparseTableTests) ... ok
rank observations by sample ... ok
rank observations by sample with alt method ... ok
rank samples by observation ... ok
Reduce method ... ok
table sorted by a function and provided axis ... ok
sorts tables by arbitrary order ... ok
test_subsample (biom.tests.test_table.SparseTableTests) ... ok
test_subsample_by_id (biom.tests.test_table.SparseTableTests) ... ok
test_subsample_by_id_observations_bug (biom.tests.test_table.SparseTableTests) ... ok
test_subsample_byid_with_replacement (biom.tests.test_table.SparseTableTests) ... ok
subsample would except when if metadata were present ... ok
test_subsample_with_replacement_n (biom.tests.test_table.SparseTableTests) ... ok
As in scikit-bio. Given a vector of observations, the total number of ... ok
As in scikit-bio. Given a vector of observations, the total number of ... ok
Test of sum! ... ok
Should convert a self styled vector to numpy type ... ok
Get a BIOM format string for a dense table of floats ... ok
Get a BIOM format string for a dense table of floats ... ok
Get a BIOM format string for a dense table of integers ... ok
Get a BIOM format string for a dense table of integers ... ok
test_to_json_empty (biom.tests.test_table.SparseTableTests) ... ok
Get a BIOM format string for a sparse table of floats ... ok
Get a BIOM format string for a sparse table of floats ... ok
Get a BIOM format string for a sparse table of integers ... ok
Get a BIOM format string for a sparse table of integers ... ok
Transform axis by arbitrary function ... ok
test_transform_return_type (biom.tests.test_table.SparseTableTests) ... ok
test_transform_sample (biom.tests.test_table.SparseTableTests) ... ok
Should transpose a sparse table ... ok
ids are updated as expected ... ok
test_update_ids_cache_bug (biom.tests.test_table.SparseTableTests) ... ok
ids are updated as expected ... ok
test_align_to_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_both (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_observation (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_sample (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_vary_values (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_both (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_both_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_observation (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_observation_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_sample (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_sample_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_concat_different_order (biom.tests.test_table.SupportTests) ... ok
test_concat_empty (biom.tests.test_table.SupportTests) ... ok
test_concat_multiple (biom.tests.test_table.SupportTests) ... ok
test_concat_no_metadata_bug (biom.tests.test_table.SupportTests) ... ok
test_concat_observations (biom.tests.test_table.SupportTests) ... ok
test_concat_pad_on_subset (biom.tests.test_table.SupportTests) ... ok
test_concat_raise_overlap (biom.tests.test_table.SupportTests) ... ok
test_concat_samples (biom.tests.test_table.SupportTests) ... ok
test_concat_table_type (biom.tests.test_table.SupportTests) ... ok
test_head (biom.tests.test_table.SupportTests) ... ok
test_head_bounded (biom.tests.test_table.SupportTests) ... ok
test_head_overstep (biom.tests.test_table.SupportTests) ... ok
test_head_zero_or_neg (biom.tests.test_table.SupportTests) ... ok
returns a dict for list lookups ... ok
prefer x ... ok
test_remove_empty_both (biom.tests.test_table.SupportTests) ... /usr/lib/python3/dist-packages/scipy/sparse/_index.py:126: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
  self._set_arrayXarray(i, j, x)
ok
test_remove_empty_identity (biom.tests.test_table.SupportTests) ... ok
test_remove_empty_obs (biom.tests.test_table.SupportTests) ... ok
test_remove_empty_sample (biom.tests.test_table.SupportTests) ... ok
Make sure a TableException can be raised ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
convert (values, (row, col)) to scipy ... ok
Take a dict and convert to sparse ... ok
Take a list of dicts and condense down to a single dict ... ok
convert [[row,col,value], ...] to scipy ... ok
lists of nparrays to sparse ... ok
list of lil_matrix to sparse ... ok
Convert nparray to sparse ... ok
Convert to expected sparse types ... ok
add group metadata works correctly ... ok
add group metadata works with existing metadata ... ok
add_sample_metadata functions with single md entry ... ok
add_sample_metadata functions with existing metadata ... ok
add_metadata functions with more than one md entry ... ok
add_sample_metadata functions with more than one md entry ... ok
test_all_keys_dropped (biom.tests.test_table.TableTests) ... ok
Cast metadata objects to defaultdict to support default values ... ok
Properly converts ScipySparseMat vectors to dense numpy repr. ... ok
test_data_property (biom.tests.test_table.TableTests) ... ok
test_del_metadata_badaxis (biom.tests.test_table.TableTests) ... ok
test_del_metadata_defaults (biom.tests.test_table.TableTests) ... ok
test_del_metadata_empty_list (biom.tests.test_table.TableTests) ... ok
test_del_metadata_full (biom.tests.test_table.TableTests) ... ok
test_del_metadata_idempotent (biom.tests.test_table.TableTests) ... ok
test_del_metadata_jagged (biom.tests.test_table.TableTests) ... ok
test_del_metadata_keys_none_observation (biom.tests.test_table.TableTests) ... ok
test_del_metadata_keys_none_sample (biom.tests.test_table.TableTests) ... ok
test_del_metadata_keys_none_whole (biom.tests.test_table.TableTests) ... ok
test_del_metadata_multiple_keys (biom.tests.test_table.TableTests) ... ok
test_del_metadata_nomd (biom.tests.test_table.TableTests) ... ok
test_del_metadata_partial (biom.tests.test_table.TableTests) ... ok
What's your type? ... ok
Test whether two matrices are equal. ... ok
Verify ValueError raised! ... ok
Parse a hdf5 formatted BIOM table ... ok
test_from_hdf5_custom_parsers (biom.tests.test_table.TableTests) ... ok
Parse a hdf5 formatted BIOM table w/o metadata ... ok
HDF5 biom parse successfully loads an empty table ... ok
test_from_hdf5_issue_731 (biom.tests.test_table.TableTests) ... ok
test_from_hdf5_non_hdf5_file_or_group (biom.tests.test_table.TableTests) ... ok
Parse a observation subset of a hdf5 formatted BIOM table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py:3980: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
  data = np.hstack(h5_data[start:end]
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py:3982: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
  indices = np.hstack(h5_indices[start:end]
ok
Parse a observation subset of a hdf5 formatted BIOM table ... ok
Parse a sample subset of a hdf5 formatted BIOM table ... ok
Parse a sample subset of a hdf5 formatted BIOM table ... ok
hdf5 biom table parse throws error with invalid parameters ... ok
test_from_tsv (biom.tests.test_table.TableTests) ... ok
test_from_tsv_dense (biom.tests.test_table.TableTests) ... ok
Test grabbing a column from the matrix. ... ok
Test grabbing a row from the matrix. ... ok
Return the value located in the matrix by the ids ... ok
getitem should work as expeceted ... ok
Test getting an element from the matrix. ... ok
Handles invalid input ... ok
Returns the observation group metadata ... ok
Returns the sample group metadata ... ok
Index all the ids!!! ... ok
Correctly handles invalid input. ... ok
returns the observation index ... ok
returns the sample index ... ok
to_sparse in constructor should be triggered ... ok
Combine ids, intersection ... ok
returns true if empty ... ok
test_length (biom.tests.test_table.TableTests) ... ok
test_max_observation (biom.tests.test_table.TableTests) ... ok
test_max_sample (biom.tests.test_table.TableTests) ... ok
test_max_whole (biom.tests.test_table.TableTests) ... ok
Correctly handles invalid input. ... ok
returns the observation metadata ... ok
returns the observation metadata for a given id ... ok
Return the sample metadata ... ok
returns the sample metadata for a given id ... ok
test_metadata_to_dataframe (biom.tests.test_table.TableTests) ... ok
test_metadata_to_dataframe_badaxis (biom.tests.test_table.TableTests) ... ok
test_metadata_to_dataframe_nomd (biom.tests.test_table.TableTests) ... ok
test_metadata_to_dataframe_uneven_list_metadata (biom.tests.test_table.TableTests) ... ok
test_min_observation (biom.tests.test_table.TableTests) ... ok
test_min_sample (biom.tests.test_table.TableTests) ... ok
test_min_whole (biom.tests.test_table.TableTests) ... ok
Test whether two matrices are not equal. ... ok
What is your NNZ? ... ok
test_nnz_issue_727 (biom.tests.test_table.TableTests) ... /usr/lib/python3/dist-packages/scipy/sparse/_index.py:84: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
  self._set_intXint(row, col, x.flat[0])
ok
Verify observation exist! ... ok
__repr__ method of biom.table.Table ... ok
Verify samples exist! ... ok
What kind of shape are you in? ... ok
test_to_dataframe (biom.tests.test_table.TableTests) ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:1476: FutureWarning: SparseDataFrame is deprecated and will be removed in a future version.
Use a regular DataFrame whose columns are SparseArrays instead.

See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.

  exp = pd.SparseDataFrame(np.array([[0.0, 1.0, 2.0], [3.0, 4.0, 5.0]]),
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py:4053: FutureWarning: SparseDataFrame is deprecated and will be removed in a future version.
Use a regular DataFrame whose columns are SparseArrays instead.

See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.

  return constructor(mat, index=index, columns=columns)
/usr/lib/python3/dist-packages/pandas/core/sparse/frame.py:253: FutureWarning: SparseSeries is deprecated and will be removed in a future version.
Use a Series with sparse values instead.

    >>> series = pd.Series(pd.SparseArray(...))

See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.

  sdict[columns[col]] = SparseSeries(
/usr/lib/python3/dist-packages/pandas/core/generic.py:4583: FutureWarning: SparseSeries is deprecated and will be removed in a future version.
Use a Series with sparse values instead.

    >>> series = pd.Series(pd.SparseArray(...))

See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.

  return self._constructor(new_data).__finalize__(self)
/usr/lib/python3/dist-packages/pandas/core/frame.py:3471: FutureWarning: SparseSeries is deprecated and will be removed in a future version.
Use a Series with sparse values instead.

    >>> series = pd.Series(pd.SparseArray(...))

See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.

  return klass(values, index=self.index, name=items, fastpath=True)
ok
test_to_dataframe_dense (biom.tests.test_table.TableTests) ... ok
test_to_dataframe_is_sparse (biom.tests.test_table.TableTests) ... ok
Write a file ... ok
test_to_hdf5_custom_formatters (biom.tests.test_table.TableTests) ... ok
Successfully writes an empty OTU table in HDF5 format ... ok
Successfully writes an empty OTU table in HDF5 format ... ok
test_to_hdf5_general_fallback_to_list (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_inconsistent_metadata_categories_observation (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_inconsistent_metadata_categories_sample (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_malformed_taxonomy (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_missing_metadata_observation (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_missing_metadata_sample (biom.tests.test_table.TableTests) ... ok
Print out self in a delimited form ... ok
Combine unique ids, union ... ok
Make sure the metadata is sane (including obs/sample ids) ... ok
test_biom_open_empty (biom.tests.test_util.UtilTests) ... ok
test_biom_open_hdf5 (biom.tests.test_util.UtilTests) ... ok
test_biom_open_hdf5_no_h5py (biom.tests.test_util.UtilTests) ... SKIP: Skipping test: test_biom_open_hdf5_no_h5py: Can only be tested without H5PY
test_biom_open_json (biom.tests.test_util.UtilTests) ... ok
compute_counts_per_sample_stats functions as expected ... ok
test_compute_counts_per_sample_stats_empty (biom.tests.test_util.UtilTests) ... ok
compute_counts_per_sample_stats functions as expected ... ok
flatten should remove one level of nesting from nested sequences ... ok
flatten should not change non-nested sequences (except to list) ... ok
test_generate_subsamples (biom.tests.test_util.UtilTests) ... ok
Getting the biom project directory functions as expected. ... ok
test_is_hdf5_file (biom.tests.test_util.UtilTests) ... ok
test_load_classic (biom.tests.test_util.UtilTests) ... ok
test_load_table_gzip_unicode (biom.tests.test_util.UtilTests) ... ok
test_load_table_unicode (biom.tests.test_util.UtilTests) ... ok
natsort should perform numeric comparisons on strings ... ok
parse_biom_config_files functions as expected. ... ok
Make sure we have the expected md5 with varied input types ... ok
unzip(items) should be the inverse of zip(*items) ... ok

----------------------------------------------------------------------
Ran 343 tests in 53.229s

OK (SKIP=1)
	rm -fr -- /tmp/dh-xdg-rundir-wNQs4LoU
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=pybuild
   dh_prep -a -O--buildsystem=pybuild
	rm -f -- debian/python3-biom-format.substvars
	rm -fr -- debian/.debhelper/generated/python3-biom-format/ debian/python3-biom-format/ debian/tmp/
   dh_auto_install -a -O--buildsystem=pybuild
	install -d /<<BUILDDIR>>/python-biom-format-2.1.8\+dfsg/debian/tmp
	pybuild --install --test-nose -i python{version} -p 3.8 --dest-dir /<<BUILDDIR>>/python-biom-format-2.1.8\+dfsg/debian/tmp
I: pybuild base:217: /usr/bin/python3 setup.py install --root /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format 
running install
running build
running build_py
running egg_info
writing biom_format.egg-info/PKG-INFO
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing entry points to biom_format.egg-info/entry_points.txt
writing requirements to biom_format.egg-info/requires.txt
writing top-level names to biom_format.egg-info/top_level.txt
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no directories found matching 'support_files'
warning: no directories found matching 'tests/test_data'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
writing manifest file 'biom_format.egg-info/SOURCES.txt'
running build_ext
running install_lib
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/exception.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/installation_informer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/metadata_adder.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/metadata_exporter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_head.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_ids.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_subsetter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_summarizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_validator.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/__init__.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_summarizer.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/metadata_adder.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/util.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/metadata_exporter.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_converter.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/installation_informer.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_subsetter.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_normalizer.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_head.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_ids.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_validator.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/uc_processor.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/long_lines.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_add_metadata.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_show_install_info.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_subset_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_summarize_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_validate_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_data
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/__init__.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_add_metadata.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_show_install_info.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_subset_table.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_summarize_table.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_table_converter.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_table_normalizer.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_uc_processor.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_validate_table.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/bad_table.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/bad_table.txt.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/empty.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/no-contents.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/test.json.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/__pycache__/__init__.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__pycache__/__init__.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__pycache__/long_lines.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__pycache__/test_err.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__pycache__/test_parse.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__pycache__/test_table.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__pycache__/test_util.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_filter.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_filter.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_subsample.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_subsample.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_transform.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_transform.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/assets
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/assets/exercise_api.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/assets
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/assets/exercise_cli.sh -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/assets
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_filter.cpython-38-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_transform.cpython-38-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_subsample.cpython-38-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/__init__.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/table.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/exception.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/util.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/err.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/parse.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/min_sparse_otu_table.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/obs_md.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/rich_sparse_otu_table.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/sam_md.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/err.py to err.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/exception.py to exception.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/parse.py to parse.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/table.py to table.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/util.py to util.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__init__.py to __init__.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__init__.py to __init__.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/installation_informer.py to installation_informer.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/metadata_adder.py to metadata_adder.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/metadata_exporter.py to metadata_exporter.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_converter.py to table_converter.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_head.py to table_head.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_ids.py to table_ids.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_normalizer.py to table_normalizer.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_subsetter.py to table_subsetter.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_summarizer.py to table_summarizer.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_validator.py to table_validator.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/uc_processor.py to uc_processor.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/util.py to util.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__init__.py to __init__.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/long_lines.py to long_lines.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_err.py to test_err.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_parse.py to test_parse.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_table.py to test_table.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_util.py to test_util.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__init__.py to __init__.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_add_metadata.py to test_add_metadata.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_show_install_info.py to test_show_install_info.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_subset_table.py to test_subset_table.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_summarize_table.py to test_summarize_table.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_table_converter.py to test_table_converter.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_table_normalizer.py to test_table_normalizer.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_uc_processor.py to test_uc_processor.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_validate_table.py to test_validate_table.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data/__init__.py to __init__.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/assets/exercise_api.py to exercise_api.cpython-38.pyc
running install_egg_info
Copying biom_format.egg-info to /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom_format-2.1.8.egg-info
Skipping SOURCES.txt
running install_scripts
Installing biom script to /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/bin
I: pybuild pybuild:310: dh_numpy3
	(grep -a -s -v python3:Depends debian/python3-biom-format.substvars; echo "python3:Depends=python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9") > debian/python3-biom-format.substvars.new
	mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars
	(grep -a -s -v python3:Depends debian/python-biom-format-doc.substvars; echo python3:Depends=python3-numpy) > debian/python-biom-format-doc.substvars.new
	mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars
   dh_installdocs -a -O--buildsystem=pybuild
	install -d debian/python3-biom-format/usr/share/doc/python3-biom-format
	install -d debian/.debhelper/generated/python3-biom-format
	cp --reflink=auto -a ./debian/README.test debian/python3-biom-format/usr/share/doc/python3-biom-format
	cp --reflink=auto -a ./debian/tests/run-unit-test debian/python3-biom-format/usr/share/doc/python3-biom-format
	chmod -R u\+rw,go=rX debian/python3-biom-format/usr/share/doc
	install -p -m0644 debian/copyright debian/python3-biom-format/usr/share/doc/python3-biom-format/copyright
	install -d debian/.debhelper/generated/python-biom-format-doc
   dh_sphinxdoc -a -O--buildsystem=pybuild
dh_sphinxdoc: warning: Sphinx documentation not found
   dh_installchangelogs -a -O--buildsystem=pybuild
	install -p -m0644 debian/changelog debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog.Debian
	install -p -m0644 ./ChangeLog.md debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog
	rm -f debian/python3-biom-format.debhelper.log
   debian/rules override_dh_installexamples
make[1]: Entering directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
dh_installexamples
	install -d debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/min_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/min_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/obs_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/rich_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/rich_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/sam_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
find debian -name "*.c" -delete
find debian -name "*.pyx" -delete
# move tests from Python3 package to examples package
if [ ! -d biom/tests ] ; then \
    mv `find debian/python*biom-format -name tests -type d` biom ; \
else \
    find debian/python*biom-format -name tests -type d | xargs rm -rf ; \
fi
make[1]: Leaving directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
   dh_installman -a -O--buildsystem=pybuild
	install -d debian/python3-biom-format/usr/share/man/man1/
	install -p -m0644 ./debian/biom.1 debian/python3-biom-format/usr/share/man/man1/biom.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/python3-biom-format/usr/share/man/man1/biom.1
	mv debian/python3-biom-format/usr/share/man/man1/biom.1.dh-new debian/python3-biom-format/usr/share/man/man1/biom.1
	chmod 0644 -- debian/python3-biom-format/usr/share/man/man1/biom.1
   dh_python3 -a -O--buildsystem=pybuild
D: dh_python3 dh_python3:161: version: 4.20200315
D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild']
D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': True, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'}
D: dh_python3 dh_python3:164: args: []
D: dh_python3 dh_python3:165: supported Python versions: 3.8 (default=3.8)
D: dh_python3 debhelper:107: skipping package: python-biom-format-doc
D: dh_python3 debhelper:152: source=python-biom-format, binary packages=['python3-biom-format']
D: dh_python3 dh_python3:183: processing package python3-biom-format...
D: dh_python3 fs:49: moving files from debian/python3-biom-format/usr/lib/python3.8/dist-packages to debian/python3-biom-format/usr/lib/python3/dist-packages/
D: dh_python3 fs:260: package python3-biom-format details = {'requires.txt': {'debian/python3-biom-format/usr/lib/python3/dist-packages/biom_format-2.1.8.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.8')}, 'ext_no_version': set()}
D: dh_python3 depends:117: generating dependencies for package python3-biom-format
D: dh_python3 pydist:137: trying to find dependency for click (python=None)
D: dh_python3 pydist:137: trying to find dependency for cython>=0.29 (python=None)
D: dh_python3 pydist:137: trying to find dependency for future>=0.16.0 (python=None)
D: dh_python3 pydist:137: trying to find dependency for numpy>=1.9.2 (python=None)
D: dh_python3 pydist:137: trying to find dependency for pandas>=0.20.0 (python=None)
D: dh_python3 pydist:137: trying to find dependency for scipy>=1.3.1 (python=None)
D: dh_python3 pydist:137: trying to find dependency for six>=1.10.0 (python=None)
D: dh_python3 depends:275: D={'python3:any', 'python3-scipy', 'python3-pandas', 'python3-six (>= 1.10.0)', 'python3 (>= 3.8~)', 'cython3', 'python3 (<< 3.9)', 'python3-click', 'python3-numpy', 'python3-future'}; R=[]; S=[]; E=[], B=[]; RT=[]
   dh_installsystemduser -a -O--buildsystem=pybuild
   dh_perl -a -O--buildsystem=pybuild
   dh_link -a -O--buildsystem=pybuild
   dh_strip_nondeterminism -a -O--buildsystem=pybuild
   dh_compress -a -O--buildsystem=pybuild
	cd debian/python3-biom-format
	chmod a-x usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian usr/share/man/man1/biom.1
	gzip -9nf usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian usr/share/man/man1/biom.1
	cd '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
	rm -f debian/python3-biom-format.debhelper.log
   debian/rules override_dh_fixperms
make[1]: Entering directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
dh_fixperms
	find debian/python3-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/python3-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/python3-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/python3-biom-format/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/python3-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/python3-biom-format/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
	find debian/python3-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian -name exercise_cli.sh -exec chmod +x \{\} \;
make[1]: Leaving directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
   dh_missing -a -O--buildsystem=pybuild
   dh_dwz -a -a -O--buildsystem=pybuild
	install -d debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf
	dwz -mdebian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug -M/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug -- debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-38-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-38-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-38-arm-linux-gnueabihf.so
	objcopy --compress-debug-sections debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug
   dh_strip -a -a -O--buildsystem=pybuild
	install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/99
	objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-38-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/99/d000da7851e52e45df40d68289a5ef20e23c9d.debug
	chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/99/d000da7851e52e45df40d68289a5ef20e23c9d.debug
	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-38-arm-linux-gnueabihf.so
	objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/99/d000da7851e52e45df40d68289a5ef20e23c9d.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-38-arm-linux-gnueabihf.so
	install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/89
	objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-38-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/89/2f637f7054b8a1afbbe0f1590e490d32ae0e19.debug
	chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/89/2f637f7054b8a1afbbe0f1590e490d32ae0e19.debug
	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-38-arm-linux-gnueabihf.so
	objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/89/2f637f7054b8a1afbbe0f1590e490d32ae0e19.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-38-arm-linux-gnueabihf.so
	install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d0
	objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-38-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d0/8a703f7e1d52eea2d7481c0f0e468da27f1f4a.debug
	chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d0/8a703f7e1d52eea2d7481c0f0e468da27f1f4a.debug
	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-38-arm-linux-gnueabihf.so
	objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d0/8a703f7e1d52eea2d7481c0f0e468da27f1f4a.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-38-arm-linux-gnueabihf.so
	install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz
	cp --reflink=auto -a debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz
	rm -fr debian/python3-biom-format/usr/lib/debug/.dwz
	rmdir -p --ignore-fail-on-non-empty debian/python3-biom-format/usr/lib/debug
	install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc
	ln -s python3-biom-format debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc/python3-biom-format-dbgsym
   dh_makeshlibs -a -a -O--buildsystem=pybuild
	rm -f debian/python3-biom-format/DEBIAN/shlibs
   dh_shlibdeps -a -a -O--buildsystem=pybuild
	install -d debian/python3-biom-format/DEBIAN
	dpkg-shlibdeps -Tdebian/python3-biom-format.substvars debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-38-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-38-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-38-arm-linux-gnueabihf.so
   dh_installdeb -a -O--buildsystem=pybuild
	printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/postinst
	cat debian/python3-biom-format.postinst.debhelper >> debian/python3-biom-format/DEBIAN/postinst
	chmod 0755 -- debian/python3-biom-format/DEBIAN/postinst
	printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/prerm
	cat debian/python3-biom-format.prerm.debhelper >> debian/python3-biom-format/DEBIAN/prerm
	chmod 0755 -- debian/python3-biom-format/DEBIAN/prerm
   dh_gencontrol -a -O--buildsystem=pybuild
	echo misc:Depends= >> debian/python3-biom-format.substvars
	echo misc:Pre-Depends= >> debian/python3-biom-format.substvars
	install -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN
	dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/.debhelper/python3-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=python3-biom-format-dbgsym "-DDepends=python3-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python3-biom-format" "-DBuild-Ids=892f637f7054b8a1afbbe0f1590e490d32ae0e19 99d000da7851e52e45df40d68289a5ef20e23c9d d08a703f7e1d52eea2d7481c0f0e468da27f1f4a" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Versions} unused, but is defined
	chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control
	dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/python3-biom-format
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Versions} unused, but is defined
	chmod 0644 -- debian/python3-biom-format/DEBIAN/control
   dh_md5sums -a -O--buildsystem=pybuild
	cd debian/python3-biom-format >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/python3-biom-format/DEBIAN/md5sums
	cd debian/.debhelper/python3-biom-format/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums
   dh_builddeb -a -O--buildsystem=pybuild
	dpkg-deb --root-owner-group --build debian/python3-biom-format ..
	dpkg-deb --root-owner-group --build debian/.debhelper/python3-biom-format/dbgsym-root ..
dpkg-deb: building package 'python3-biom-format-dbgsym' in '../python3-biom-format-dbgsym_2.1.8+dfsg-3_armhf.deb'.
dpkg-deb: building package 'python3-biom-format' in '../python3-biom-format_2.1.8+dfsg-3_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../python-biom-format_2.1.8+dfsg-3_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-07-21T12:19:55Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


python-biom-format_2.1.8+dfsg-3_armhf.changes:
----------------------------------------------

Format: 1.8
Date: Sun, 19 Jul 2020 01:26:22 +0530
Source: python-biom-format
Binary: python3-biom-format python3-biom-format-dbgsym
Architecture: armhf
Version: 2.1.8+dfsg-3
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Nilesh Patra <npatra974@gmail.com>
Description:
 python3-biom-format - Biological Observation Matrix (BIOM) format (Python 3)
Changes:
 python-biom-format (2.1.8+dfsg-3) unstable; urgency=medium
 .
   * Team Upload.
   * Add python3-h5py to depends (Fixes debci)
   * Fix import-name
   * Fix lintian
   * Create manpages
   * compat version: 13
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 7f9691cc5fecdc0853a96c597b4aa5ce5646bd4f 271148 python3-biom-format-dbgsym_2.1.8+dfsg-3_armhf.deb
 c609e8d300a07f1d8416d256d8c3dba303f241f0 129220 python3-biom-format_2.1.8+dfsg-3_armhf.deb
Checksums-Sha256:
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 2720355b924393df62263661124a731198eac125fddca15098b53cf6a1e80dc2 271148 python3-biom-format-dbgsym_2.1.8+dfsg-3_armhf.deb
 afcb6208d6811e67f09e6cfbe26bab534d7e794f44838af12a6ce8cc3465a371 129220 python3-biom-format_2.1.8+dfsg-3_armhf.deb
Files:
 467889b07279328dc32c0c0bb7809427 7499 python optional python-biom-format_2.1.8+dfsg-3_armhf.buildinfo
 8947d51002ac6b99b3b01f422ee924aa 271148 debug optional python3-biom-format-dbgsym_2.1.8+dfsg-3_armhf.deb
 50043856be900315b30a49ef5fae764b 129220 python optional python3-biom-format_2.1.8+dfsg-3_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


python3-biom-format-dbgsym_2.1.8+dfsg-3_armhf.deb
-------------------------------------------------

 new Debian package, version 2.0.
 size 271148 bytes: control archive=704 bytes.
     509 bytes,    12 lines      control              
     417 bytes,     4 lines      md5sums              
 Package: python3-biom-format-dbgsym
 Source: python-biom-format
 Version: 2.1.8+dfsg-3
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 316
 Depends: python3-biom-format (= 2.1.8+dfsg-3)
 Section: debug
 Priority: optional
 Description: debug symbols for python3-biom-format
 Build-Ids: 892f637f7054b8a1afbbe0f1590e490d32ae0e19 99d000da7851e52e45df40d68289a5ef20e23c9d d08a703f7e1d52eea2d7481c0f0e468da27f1f4a

drwxr-xr-x root/root         0 2020-07-18 19:56 ./
drwxr-xr-x root/root         0 2020-07-18 19:56 ./usr/
drwxr-xr-x root/root         0 2020-07-18 19:56 ./usr/lib/
drwxr-xr-x root/root         0 2020-07-18 19:56 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-07-18 19:56 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-07-18 19:56 ./usr/lib/debug/.build-id/89/
-rw-r--r-- root/root     98308 2020-07-18 19:56 ./usr/lib/debug/.build-id/89/2f637f7054b8a1afbbe0f1590e490d32ae0e19.debug
drwxr-xr-x root/root         0 2020-07-18 19:56 ./usr/lib/debug/.build-id/99/
-rw-r--r-- root/root    140644 2020-07-18 19:56 ./usr/lib/debug/.build-id/99/d000da7851e52e45df40d68289a5ef20e23c9d.debug
drwxr-xr-x root/root         0 2020-07-18 19:56 ./usr/lib/debug/.build-id/d0/
-rw-r--r-- root/root     52524 2020-07-18 19:56 ./usr/lib/debug/.build-id/d0/8a703f7e1d52eea2d7481c0f0e468da27f1f4a.debug
drwxr-xr-x root/root         0 2020-07-18 19:56 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2020-07-18 19:56 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root     15008 2020-07-18 19:56 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug
drwxr-xr-x root/root         0 2020-07-18 19:56 ./usr/share/
drwxr-xr-x root/root         0 2020-07-18 19:56 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-07-18 19:56 ./usr/share/doc/python3-biom-format-dbgsym -> python3-biom-format


python3-biom-format_2.1.8+dfsg-3_armhf.deb
------------------------------------------

 new Debian package, version 2.0.
 size 129220 bytes: control archive=2772 bytes.
    1978 bytes,    36 lines      control              
    4392 bytes,    48 lines      md5sums              
     263 bytes,    12 lines   *  postinst             #!/bin/sh
     412 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: python3-biom-format
 Source: python-biom-format
 Version: 2.1.8+dfsg-3
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 717
 Depends: python3-h5py, python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, cython3, python3 (<< 3.9), python3 (>= 3.8~), python3-click, python3-future, python3-pandas, python3-scipy, python3-six (>= 1.10.0), python3:any, libc6 (>= 2.4)
 Suggests: python-biom-format-doc
 Breaks: biom-format-tools (<< 2.1.7+dfsg-3)
 Replaces: biom-format-tools (<< 2.1.7+dfsg-3)
 Provides: biom-format-tools
 Section: python
 Priority: optional
 Homepage: https://biom-format.org/
 Description: Biological Observation Matrix (BIOM) format (Python 3)
  The BIOM file format (canonically pronounced biome) is designed to be a
  general-use format for representing biological sample by observation
  contingency tables. BIOM is a recognized standard for the Earth
  Microbiome Project and is a Genomics Standards Consortium candidate
  project.
  .
  The BIOM format is designed for general use in broad areas of
  comparative -omics. For example, in marker-gene surveys, the primary use
  of this format is to represent OTU tables: the observations in this case
  are OTUs and the matrix contains counts corresponding to the number of
  times each OTU is observed in each sample. With respect to metagenome
  data, this format would be used to represent metagenome tables: the
  observations in this case might correspond to SEED subsystems, and the
  matrix would contain counts corresponding to the number of times each
  subsystem is observed in each metagenome. Similarly, with respect to
  genome data, this format may be used to represent a set of genomes: the
  observations in this case again might correspond to SEED subsystems, and
  the counts would correspond to the number of times each subsystem is
  observed in each genome.
  .
  This package provides the BIOM format library for the Python 3 interpreter.

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| Post Build                                                                   |
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| Cleanup                                                                      |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

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| Summary                                                                      |
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Build Architecture: armhf
Build-Space: 112088
Build-Time: 253
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 938
Job: python-biom-format_2.1.8+dfsg-3
Machine Architecture: armhf
Package: python-biom-format
Package-Time: 1252
Source-Version: 2.1.8+dfsg-3
Space: 112088
Status: successful
Version: 2.1.8+dfsg-3
--------------------------------------------------------------------------------
Finished at 2020-07-21T12:19:55Z
Build needed 00:20:52, 112088k disc space
Raspbian Package Auto-Building

Build log for python-biom-format (2.1.8+dfsg-3) on armhf
