python-biom-format →
2.1.8+dfsg-2 →
armhf → 2020-04-09 18:14:42
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-04
+==============================================================================+
| python-biom-format 2.1.8+dfsg-2 (armhf) Thu, 09 Apr 2020 17:41:50 +0000 |
+==============================================================================+
Package: python-biom-format
Version: 2.1.8+dfsg-2
Source Version: 2.1.8+dfsg-2
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-641049bc-6734-4668-904e-62f40867aa57' with '<<CHROOT>>'
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Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.6 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.7 MB]
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| Fetch source files |
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Check APT
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Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'python-biom-format' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-biom-format.git
Please use:
git clone https://salsa.debian.org/med-team/python-biom-format.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 8540 kB of source archives.
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Get:2 http://172.17.0.1/private bullseye-staging/main python-biom-format 2.1.8+dfsg-2 (tar) [8528 kB]
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gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-Og3OEk/apt_archive ./ InRelease
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Install core build dependencies (apt-based resolver)
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Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 3 not upgraded.
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debconf: delaying package configuration, since apt-utils is not installed
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(Reading database ... 12224 files and directories currently installed.)
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Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
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| Check architectures |
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Arch check ok (armhf included in any-amd64 any-arm64 any-i386 any-mips64el any-ppc64el armel armhf mipsel all)
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| Install package build dependencies |
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Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib
Filtered Build-Depends: debhelper-compat (= 12), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib
dpkg-deb: building package 'sbuild-build-depends-python-biom-format-dummy' in '/<<BUILDDIR>>/resolver-Og3OEk/apt_archive/sbuild-build-depends-python-biom-format-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-python-biom-format-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-Og3OEk/apt_archive ./ InRelease
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Install python-biom-format build dependencies (apt-based resolver)
------------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bash-completion bsdmainutils
ca-certificates cython3 debhelper dh-autoreconf dh-python
dh-strip-nondeterminism docutils-common dwz file fonts-lyx gettext
gettext-base groff-base help2man intltool-debian libaec0 libarchive-zip-perl
libblas3 libbsd0 libcbor0 libcroco3 libdebhelper-perl libedit2 libelf1
libevent-2.1-7 libevent-core-2.1-7 libevent-pthreads-2.1-7 libexpat1
libexpat1-dev libfido2-1 libfile-stripnondeterminism-perl libfreetype6
libgfortran5 libglib2.0-0 libgssapi-krb5-2 libhdf5-openmpi-103
libhwloc-plugins libhwloc15 libibverbs1 libicu63 libjs-jquery
libjs-jquery-ui libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblocale-gettext-perl
libmagic-mgc libmagic1 libmpdec2 libnl-3-200 libnl-route-3-200 libopenmpi3
libpciaccess0 libpipeline1 libpmix2 libpng16-16 libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev
libpython3.7-minimal libpython3.7-stdlib libpython3.8 libpython3.8-dev
libpython3.8-minimal libpython3.8-stdlib libsigsegv2 libssl1.1
libsub-override-perl libsz2 libtinfo5 libtool libuchardet0 libx11-6
libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 m4 man-db
mime-support mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common
openssh-client openssl po-debconf python-babel-localedata
python-matplotlib-data python3 python3-alabaster python3-all python3-all-dev
python3-babel python3-certifi python3-chardet python3-click python3-colorama
python3-cycler python3-dateutil python3-decorator python3-dev
python3-distutils python3-docutils python3-future python3-h5py python3-idna
python3-imagesize python3-jinja2 python3-kiwisolver python3-lib2to3
python3-markupsafe python3-matplotlib python3-minimal python3-mpi4py
python3-nose python3-numpy python3-packaging python3-pandas
python3-pandas-lib python3-pkg-resources python3-pygments python3-pyparsing
python3-requests python3-roman python3-scipy python3-setuptools python3-six
python3-sphinx python3-tz python3-urllib3 python3.7 python3.7-dev
python3.7-minimal python3.8 python3.8-dev python3.8-minimal sensible-utils
sgml-base sphinx-common ttf-bitstream-vera xml-core zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation cython-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev
groff krb5-doc krb5-user libjs-jquery-ui-docs pciutils libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser opencl-icd
gfortran | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass
libmail-box-perl python3-doc python3-tk python3-venv python-cycler-doc
docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french
texlive-latex-base texlive-latex-recommended python-future-doc
python-h5py-doc python-jinja2-doc dvipng ffmpeg gir1.2-gtk-3.0 ghostscript
inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi
python3-gi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip
python3-tornado texlive-extra-utils texlive-latex-extra ttf-staypuft
python-nose-doc gfortran python-numpy-doc python3-pytest python3-numpy-dbg
python-pandas-doc python3-statsmodels python-pygments-doc
python-pyparsing-doc python3-cryptography python3-openssl python3-socks
python-requests-doc python-scipy-doc python-setuptools-doc imagemagick-6.q16
latexmk libjs-mathjax python3-sphinx-rtd-theme python3-stemmer sphinx-doc
texlive-fonts-recommended texlive-plain-generic python3.7-venv python3.7-doc
binfmt-support python3.8-venv python3.8-doc sgml-base-doc
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs ibverbs-providers javascript-common krb5-locales libltdl-dev
libopenmpi-dev xauth libmail-sendmail-perl libpaper-utils python3-pil
python3-tk python3-numexpr python3-tables python3-xlrd python3-openpyxl
python3-xlwt python3-bs4 python3-html5lib python3-lxml
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bash-completion bsdmainutils
ca-certificates cython3 debhelper dh-autoreconf dh-python
dh-strip-nondeterminism docutils-common dwz file fonts-lyx gettext
gettext-base groff-base help2man intltool-debian libaec0 libarchive-zip-perl
libblas3 libbsd0 libcbor0 libcroco3 libdebhelper-perl libedit2 libelf1
libevent-2.1-7 libevent-core-2.1-7 libevent-pthreads-2.1-7 libexpat1
libexpat1-dev libfido2-1 libfile-stripnondeterminism-perl libfreetype6
libgfortran5 libglib2.0-0 libgssapi-krb5-2 libhdf5-openmpi-103
libhwloc-plugins libhwloc15 libibverbs1 libicu63 libjs-jquery
libjs-jquery-ui libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblocale-gettext-perl
libmagic-mgc libmagic1 libmpdec2 libnl-3-200 libnl-route-3-200 libopenmpi3
libpciaccess0 libpipeline1 libpmix2 libpng16-16 libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.7 libpython3.7-dev
libpython3.7-minimal libpython3.7-stdlib libpython3.8 libpython3.8-dev
libpython3.8-minimal libpython3.8-stdlib libsigsegv2 libssl1.1
libsub-override-perl libsz2 libtinfo5 libtool libuchardet0 libx11-6
libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 m4 man-db
mime-support mpi-default-bin ocl-icd-libopencl1 openmpi-bin openmpi-common
openssh-client openssl po-debconf python-babel-localedata
python-matplotlib-data python3 python3-alabaster python3-all python3-all-dev
python3-babel python3-certifi python3-chardet python3-click python3-colorama
python3-cycler python3-dateutil python3-decorator python3-dev
python3-distutils python3-docutils python3-future python3-h5py python3-idna
python3-imagesize python3-jinja2 python3-kiwisolver python3-lib2to3
python3-markupsafe python3-matplotlib python3-minimal python3-mpi4py
python3-nose python3-numpy python3-packaging python3-pandas
python3-pandas-lib python3-pkg-resources python3-pygments python3-pyparsing
python3-requests python3-roman python3-scipy python3-setuptools python3-six
python3-sphinx python3-tz python3-urllib3 python3.7 python3.7-dev
python3.7-minimal python3.8 python3.8-dev python3.8-minimal
sbuild-build-depends-python-biom-format-dummy sensible-utils sgml-base
sphinx-common ttf-bitstream-vera xml-core zlib1g-dev
0 upgraded, 160 newly installed, 0 to remove and 3 not upgraded.
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Get:69 http://172.17.0.1/private bullseye-staging/main armhf docutils-common all 0.16+dfsg-2 [129 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf fonts-lyx all 2.3.4.2-2 [200 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf help2man armhf 1.47.13 [180 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libaec0 armhf 1.0.4-1 [20.0 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-2 [108 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libevent-2.1-7 armhf 2.1.11-stable-1 [165 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libevent-core-2.1-7 armhf 2.1.11-stable-1 [124 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libevent-pthreads-2.1-7 armhf 2.1.11-stable-1 [54.7 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.9-1 [119 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-2 [274 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10-20200324-1+rpi1 [230 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libhwloc15 armhf 2.2.0+dfsg-3 [113 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-200 armhf 3.4.0-1 [55.0 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-200 armhf 3.4.0-1 [132 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libibverbs1 armhf 28.0-1+b1 [47.9 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libpciaccess0 armhf 0.14-1 [51.0 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.9-2 [298 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.9-2 [692 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libxnvctrl0 armhf 440.64-1 [25.1 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf ocl-icd-libopencl1 armhf 2.2.12-3 [35.9 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-plugins armhf 2.2.0+dfsg-3 [19.0 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libpmix2 armhf 3.1.5-1 [377 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi3 armhf 4.0.2-5+rpi1 [1679 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libsz2 armhf 1.0.4-1 [6664 B]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-openmpi-103 armhf 1.10.4+repack-11 [1329 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.3.1~dfsg-3 [332 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libjs-underscore all 1.9.1~dfsg-1 [99.4 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libjs-sphinxdoc all 1.8.5-8 [96.9 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-2 [1602 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.3-7 [26.1 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8 armhf 3.8.2-1 [1367 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-dev armhf 3.8.2-1 [46.0 MB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.8.2-2 [20.9 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-stdlib armhf 3.7.7-1 [1670 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7 armhf 3.7.7-1 [1253 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-dev armhf 3.7.7-1 [40.2 MB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libpython3-all-dev armhf 3.8.2-2 [1072 B]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf openmpi-common all 4.0.2-5+rpi1 [168 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf openmpi-bin armhf 4.0.2-5+rpi1 [185 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf mpi-default-bin armhf 1.13 [4672 B]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf python-babel-localedata all 2.8.0+dfsg.1-3 [4998 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf ttf-bitstream-vera all 1.10-8 [352 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf python-matplotlib-data all 3.1.2-2 [4139 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf python3-alabaster all 0.7.8-1.1 [18.6 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf python3.7 armhf 3.7.7-1 [354 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf python3-all armhf 3.8.2-2 [1060 B]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf python3.8-dev armhf 3.8.2-1 [533 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.8.2-2 [1168 B]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf python3.7-dev armhf 3.7.7-1 [517 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf python3-all-dev armhf 3.8.2-2 [1076 B]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 44.0.0-1 [155 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf python3-tz all 2019.3-1 [27.2 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf python3-babel all 2.8.0+dfsg.1-3 [99.8 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf python3-certifi all 2019.11.28-2 [149 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf python3-chardet all 3.0.4-4 [80.8 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf python3-colorama all 0.4.3-1 [27.8 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf python3-click all 7.0-3 [73.8 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf python3-six all 1.14.0-2 [16.7 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf python3-cycler all 0.10.0-3 [8084 B]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf python3-dateutil all 2.7.3-3 [64.5 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf python3-decorator all 4.4.2-1 [15.8 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf python3-roman all 2.0.0-4 [8972 B]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf python3-docutils all 0.16+dfsg-2 [383 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf python3-future all 0.18.2-2 [348 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf python3-numpy armhf 1:1.17.4-5+b1 [4484 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf python3-mpi4py armhf 3.0.3-4 [697 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf python3-h5py armhf 2.10.0-2+b1 [1185 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf python3-idna all 2.8-1 [36.5 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf python3-imagesize all 1.2.0-2 [5824 B]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf python3-markupsafe armhf 1.1.1-1 [15.0 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf python3-jinja2 all 2.10.1-2 [107 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf python3-kiwisolver armhf 1.0.1-3 [245 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf python3-pyparsing all 2.4.6-1 [109 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf python3-matplotlib armhf 3.1.2-2 [5303 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf python3-nose all 1.3.7-5 [133 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf python3-packaging all 20.3-1 [29.7 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas-lib armhf 0.25.3+dfsg-9+rpi1 [7002 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas all 0.25.3+dfsg-9+rpi1 [1984 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf python3-pygments all 2.3.1+dfsg-2 [596 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf python3-urllib3 all 1.25.8-2 [104 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf python3-requests all 2.23.0+dfsg-2 [71.4 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf python3-scipy armhf 1.3.3-3+b1 [12.1 MB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf python3-setuptools all 44.0.0-1 [313 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf sphinx-common all 1.8.5-8 [447 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf python3-sphinx all 1.8.5-8 [482 kB]
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
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Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.2-1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libxml2:armhf (2.9.10+dfsg-4) ...
Setting up liblocale-gettext-perl (1.07-4) ...
Setting up libsz2:armhf (1.0.4-1) ...
Setting up libpython3-stdlib:armhf (3.8.2-2) ...
Setting up libjs-underscore (1.9.1~dfsg-1) ...
Setting up libevent-pthreads-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libfile-stripnondeterminism-perl (1.6.3-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libpython3.7-stdlib:armhf (3.7.7-1) ...
Setting up liblapack3:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libxcb1:armhf (1.14-2) ...
Setting up libpython3.7:armhf (3.7.7-1) ...
Setting up libtool (2.4.6-14) ...
Setting up libpython3.7-dev:armhf (3.7.7-1) ...
Setting up libedit2:armhf (3.1-20191231-1) ...
Setting up m4 (1.4.18-4) ...
Setting up python3 (3.8.2-2) ...
Setting up python3-markupsafe (1.1.1-1) ...
Setting up python3-tz (2019.3-1) ...
Setting up libnl-route-3-200:armhf (3.4.0-1) ...
Setting up help2man (1.47.13) ...
Setting up python3-six (1.14.0-2) ...
Setting up ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
128 added, 0 removed; done.
Setting up python3-roman (2.0.0-4) ...
Setting up python3-decorator (4.4.2-1) ...
Setting up python3-jinja2 (2.10.1-2) ...
Setting up libjs-jquery-ui (1.12.1+dfsg-5) ...
Setting up python3-pyparsing (2.4.6-1) ...
Setting up libfreetype6:armhf (2.10.1-2) ...
Setting up python3-certifi (2019.11.28-2) ...
Setting up libpython3.8:armhf (3.8.2-1) ...
Setting up python3-cycler (0.10.0-3) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-7) ...
Setting up python3-idna (2.8-1) ...
Setting up cython3 (0.29.14-0.1+b1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up libjs-sphinxdoc (1.8.5-8) ...
Setting up autoconf (2.69-11.1) ...
Setting up python3-urllib3 (1.25.8-2) ...
Setting up dh-strip-nondeterminism (1.6.3-2) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-4) ...
Setting up xml-core (0.18+nmu1) ...
Setting up libx11-6:armhf (2:1.6.9-2) ...
Setting up python3-dateutil (2.7.3-3) ...
Setting up python3-lib2to3 (3.8.2-2) ...
Setting up liblbfgsb0:armhf (3.0+dfsg.3-7) ...
Setting up python3-imagesize (1.2.0-2) ...
Setting up python3-pkg-resources (44.0.0-1) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up python3-distutils (3.8.2-2) ...
Setting up dh-python (4.20200315) ...
Setting up python3.7 (3.7.7-1) ...
Setting up libibverbs1:armhf (28.0-1+b1) ...
Setting up gettext (0.19.8.1-10) ...
Setting up python3-setuptools (44.0.0-1) ...
Setting up python3-babel (2.8.0+dfsg.1-3) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python3-colorama (0.4.3-1) ...
Setting up openssh-client (1:8.2p1-4) ...
Setting up python3-alabaster (0.7.8-1.1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up python3-all (3.8.2-2) ...
Setting up python3-click (7.0-3) ...
Setting up man-db (2.9.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-nose (1.3.7-5) ...
Setting up python3.7-dev (3.7.7-1) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libxnvctrl0:armhf (440.64-1) ...
Setting up python3-pygments (2.3.1+dfsg-2) ...
Setting up python3-packaging (20.3-1) ...
Setting up python3-chardet (3.0.4-4) ...
Setting up libpython3.8-dev:armhf (3.8.2-1) ...
Setting up sphinx-common (1.8.5-8) ...
Setting up python3-requests (2.23.0+dfsg-2) ...
Setting up python3-kiwisolver (1.0.1-3) ...
Setting up python3-numpy (1:1.17.4-5+b1) ...
Setting up python3.8-dev (3.8.2-1) ...
Setting up python3-future (0.18.2-2) ...
update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode
update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode
Setting up python3-matplotlib (3.1.2-2) ...
Setting up python3-scipy (1.3.3-3+b1) ...
Setting up libpython3-dev:armhf (3.8.2-2) ...
Setting up po-debconf (1.0.21) ...
Setting up python3-pandas-lib (0.25.3+dfsg-9+rpi1) ...
Setting up libhwloc-plugins:armhf (2.2.0+dfsg-3) ...
Setting up python3-pandas (0.25.3+dfsg-9+rpi1) ...
/usr/lib/python3/dist-packages/pandas/tests/frame/test_alter_axes.py:241: SyntaxWarning: "is" with a literal. Did you mean "=="?
False if (keys[0] is "A" and keys[1] is "A") else drop # noqa: F632
/usr/lib/python3/dist-packages/pandas/tests/frame/test_alter_axes.py:241: SyntaxWarning: "is" with a literal. Did you mean "=="?
False if (keys[0] is "A" and keys[1] is "A") else drop # noqa: F632
Setting up libpython3-all-dev:armhf (3.8.2-2) ...
Setting up python3-dev (3.8.2-2) ...
Setting up python3-all-dev (3.8.2-2) ...
Setting up libpmix2:armhf (3.1.5-1) ...
Setting up libopenmpi3:armhf (4.0.2-5+rpi1) ...
Setting up libhdf5-openmpi-103:armhf (1.10.4+repack-11) ...
Setting up openmpi-bin (4.0.2-5+rpi1) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up mpi-default-bin (1.13) ...
Setting up python3-mpi4py (3.0.3-4) ...
Setting up python3-h5py (2.10.0-2+b1) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (12.10) ...
Processing triggers for libc-bin (2.30-4+rpi1) ...
Processing triggers for sgml-base (1.29.1) ...
Setting up docutils-common (0.16+dfsg-2) ...
Processing triggers for sgml-base (1.29.1) ...
Setting up python3-docutils (0.16+dfsg-2) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-sphinx (1.8.5-8) ...
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode
Setting up sbuild-build-depends-python-biom-format-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.4-armmp armhf (armv7l)
Toolchain package versions: binutils_2.34-5+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-8+rpi1 gcc-9_9.3.0-8+rpi1 libc6-dev_2.30-4+rpi1 libstdc++-9-dev_9.3.0-8+rpi1 libstdc++6_10-20200324-1+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_2.0.1 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 bash-completion_1:2.10-1 binutils_2.34-5+rpi1 binutils-arm-linux-gnueabihf_2.34-5+rpi1 binutils-common_2.34-5+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-8+rpi1 cython3_0.29.14-0.1+b1 dash_0.5.10.2-7 debconf_1.5.73 debhelper_12.10 debianutils_4.9.1 dh-autoreconf_19 dh-python_4.20200315 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dirmngr_2.2.20-1 docutils-common_0.16+dfsg-2 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 fonts-lyx_2.3.4.2-2 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-8+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10-20200324-1+rpi1 gcc-9_9.3.0-8+rpi1 gcc-9-base_9.3.0-8+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-2 help2man_1.47.13 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 libacl1_2.2.53-6 libaec0_1.0.4-1 libapt-pkg6.0_2.0.1 libarchive-zip-perl_1.68-1 libasan5_9.3.0-8+rpi1 libassuan0_2.5.3-7 libatomic1_10-20200324-1+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-5+rpi1 libblas3_3.9.0-2 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-4+rpi1 libc-dev-bin_2.30-4+rpi1 libc6_2.30-4+rpi1 libc6-dev_2.30-4+rpi1 libcap-ng0_0.7.9-2.1+b1 libcap2_1:2.33-1 libcap2-bin_1:2.33-1 libcbor0_0.5.0+dfsg-2 libcc1-0_10-20200324-1+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.15-1 libcrypt1_1:4.4.15-1 libctf-nobfd0_2.34-5+rpi1 libctf0_2.34-5+rpi1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_12.10 libdpkg-perl_1.19.7 libedit2_3.1-20191231-1 libelf1_0.176-1.1 libevent-2.1-7_2.1.11-stable-1 libevent-core-2.1-7_2.1.11-stable-1 libevent-pthreads-2.1-7_2.1.11-stable-1 libexpat1_2.2.9-1 libexpat1-dev_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi7_3.3-4 libfido2-1_1.3.1-1 libfile-stripnondeterminism-perl_1.6.3-2 libfreetype6_2.10.1-2 libgcc-9-dev_9.3.0-8+rpi1 libgcc-s1_10-20200324-1+rpi1 libgcc1_1:10-20200324-1+rpi1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_10-20200324-1+rpi1 libglib2.0-0_2.64.1-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.12-2 libgomp1_10-20200324-1+rpi1 libgpg-error0_1.37-1 libgssapi-krb5-2_1.17-7 libhdf5-openmpi-103_1.10.4+repack-11 libhogweed5_3.5.1+really3.5.1-2 libhwloc-plugins_2.2.0+dfsg-3 libhwloc15_2.2.0+dfsg-3 libibverbs1_28.0-1+b1 libicu63_63.2-3 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libjs-jquery_3.3.1~dfsg-3 libjs-jquery-ui_1.12.1+dfsg-5 libjs-sphinxdoc_1.8.5-8 libjs-underscore_1.9.1~dfsg-1 libk5crypto3_1.17-7 libkeyutils1_1.6.1-2 libkrb5-3_1.17-7 libkrb5support0_1.17-7 libksba8_1.3.5-2 liblapack3_3.9.0-2 liblbfgsb0_3.0+dfsg.3-7 libldap-2.4-2_2.4.49+dfsg-2 libldap-common_2.4.49+dfsg-2 liblocale-gettext-perl_1.07-4 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-3 libmpfr6_4.0.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnl-3-200_3.4.0-1 libnl-route-3-200_3.4.0-1 libnpth0_1.6-1 libopenmpi3_4.0.2-5+rpi1 libp11-kit0_0.23.20-1 libpam-cap_1:2.33-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpciaccess0_0.14-1 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libpmix2_3.1.5-1 libpng16-16_1.6.37-2 libpython3-all-dev_3.8.2-2 libpython3-dev_3.8.2-2 libpython3-stdlib_3.8.2-2 libpython3.7_3.7.7-1 libpython3.7-dev_3.7.7-1 libpython3.7-minimal_3.7.7-1 libpython3.7-stdlib_3.7.7-1 libpython3.8_3.8.2-1 libpython3.8-dev_3.8.2-1 libpython3.8-minimal_3.8.2-1 libpython3.8-stdlib_3.8.2-1 libreadline7_7.0-5 libreadline8_8.0-4 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.0-1+b1 libsemanage-common_3.0-1 libsemanage1_3.0-1+b1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libsqlite3-0_3.31.1-4 libss2_1.45.6-1 libssl1.1_1.1.1f-1 libstdc++-9-dev_9.3.0-8+rpi1 libstdc++6_10-20200324-1+rpi1 libsub-override-perl_0.09-2 libsystemd0_244.3-1+rpi1 libsz2_1.0.4-1 libtasn1-6_4.16.0-2 libtinfo5_6.2-1 libtinfo6_6.2-1 libtool_2.4.6-14 libubsan1_10-20200324-1+rpi1 libuchardet0_0.0.6-3 libudev1_244.3-1+rpi1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libx11-6_2:1.6.9-2 libx11-data_2:1.6.9-2 libxau6_1:1.0.8-1+b2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxml2_2.9.10+dfsg-4 libxnvctrl0_440.64-1 libzstd1_1.4.4+dfsg-3+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mime-support_3.64 mount_2.34-0.1 mpi-default-bin_1.13 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 ocl-icd-libopencl1_2.2.12-3 openmpi-bin_4.0.2-5+rpi1 openmpi-common_4.0.2-5+rpi1 openssh-client_1:8.2p1-4 openssl_1.1.1f-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 po-debconf_1.0.21 python-babel-localedata_2.8.0+dfsg.1-3 python-matplotlib-data_3.1.2-2 python3_3.8.2-2 python3-alabaster_0.7.8-1.1 python3-all_3.8.2-2 python3-all-dev_3.8.2-2 python3-babel_2.8.0+dfsg.1-3 python3-certifi_2019.11.28-2 python3-chardet_3.0.4-4 python3-click_7.0-3 python3-colorama_0.4.3-1 python3-cycler_0.10.0-3 python3-dateutil_2.7.3-3 python3-decorator_4.4.2-1 python3-dev_3.8.2-2 python3-distutils_3.8.2-2 python3-docutils_0.16+dfsg-2 python3-future_0.18.2-2 python3-h5py_2.10.0-2+b1 python3-idna_2.8-1 python3-imagesize_1.2.0-2 python3-jinja2_2.10.1-2 python3-kiwisolver_1.0.1-3 python3-lib2to3_3.8.2-2 python3-markupsafe_1.1.1-1 python3-matplotlib_3.1.2-2 python3-minimal_3.8.2-2 python3-mpi4py_3.0.3-4 python3-nose_1.3.7-5 python3-numpy_1:1.17.4-5+b1 python3-packaging_20.3-1 python3-pandas_0.25.3+dfsg-9+rpi1 python3-pandas-lib_0.25.3+dfsg-9+rpi1 python3-pkg-resources_44.0.0-1 python3-pygments_2.3.1+dfsg-2 python3-pyparsing_2.4.6-1 python3-requests_2.23.0+dfsg-2 python3-roman_2.0.0-4 python3-scipy_1.3.3-3+b1 python3-setuptools_44.0.0-1 python3-six_1.14.0-2 python3-sphinx_1.8.5-8 python3-tz_2019.3-1 python3-urllib3_1.25.8-2 python3.7_3.7.7-1 python3.7-dev_3.7.7-1 python3.7-minimal_3.7.7-1 python3.8_3.8.2-1 python3.8-dev_3.8.2-1 python3.8-minimal_3.8.2-1 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-biom-format-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sgml-base_1.29.1 sphinx-common_1.8.5-8 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 ttf-bitstream-vera_1.10-8 tzdata_2019c-3 util-linux_2.34-0.1 xml-core_0.18+nmu1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Fri Apr 3 21:33:57 2020 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./python-biom-format_2.1.8+dfsg-2.dsc
dpkg-source: info: extracting python-biom-format in /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg
dpkg-source: info: unpacking python-biom-format_2.1.8+dfsg.orig.tar.xz
dpkg-source: info: unpacking python-biom-format_2.1.8+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying ignore_local_dist-packages.patch
dpkg-source: info: applying no-web-adds.patch
dpkg-source: info: applying fix_future_import.patch
dpkg-source: info: applying enable_sloppy_sphinx_build.patch
dpkg-source: info: applying sphinx_1.6.patch
dpkg-source: info: applying sphinx.ext.pngmath.patch
dpkg-source: info: applying posix_shell.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-641049bc-6734-4668-904e-62f40867aa57
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package python-biom-format
dpkg-buildpackage: info: source version 2.1.8+dfsg-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --with python3,bash-completion,sphinxdoc --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
pybuild --clean --test-nose -i python{version} -p "3.7 3.8"
I: pybuild base:217: python3.7 setup.py clean
Compiling biom/_filter.pyx because it changed.
Compiling biom/_transform.pyx because it changed.
Compiling biom/_subsample.pyx because it changed.
[1/3] Cythonizing biom/_filter.pyx
[2/3] Cythonizing biom/_subsample.pyx
[3/3] Cythonizing biom/_transform.pyx
running clean
removing '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build' (and everything under it)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_filter.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_subsample.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_transform.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.7' does not exist -- can't clean it
I: pybuild base:217: python3.8 setup.py clean
running clean
removing '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.8' does not exist -- can't clean it
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars ./biom/_filter.c ./biom/_subsample.c ./biom/_transform.c debian/files
rm -fr -- debian/python3-biom-format/ debian/tmp/ debian/python-biom-format-doc/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
debian/rules binary-arch
dh binary-arch --with python3,bash-completion,sphinxdoc --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
pybuild --configure --test-nose -i python{version} -p "3.7 3.8"
I: pybuild base:217: python3.7 setup.py config
Compiling biom/_filter.pyx because it changed.
Compiling biom/_transform.pyx because it changed.
Compiling biom/_subsample.pyx because it changed.
[1/3] Cythonizing biom/_filter.pyx
[2/3] Cythonizing biom/_subsample.pyx
[3/3] Cythonizing biom/_transform.pyx
running config
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_filter.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_subsample.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/biom/_transform.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
I: pybuild base:217: python3.8 setup.py config
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
# arch
USE_CYTHON=true dh_auto_build
pybuild --build --test-nose -i python{version} -p "3.7 3.8"
I: pybuild base:217: /usr/bin/python3.7 setup.py build
running build
running build_py
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
copying biom/err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
copying biom/exception.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
copying biom/parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
copying biom/table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
copying biom/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
copying biom/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/installation_informer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/metadata_adder.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/metadata_exporter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/table_head.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/table_ids.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/table_subsetter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/table_summarizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/table_validator.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
copying biom/cli/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests
copying biom/tests/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests
copying biom/tests/long_lines.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests
copying biom/tests/test_err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests
copying biom/tests/test_parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests
copying biom/tests/test_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests
copying biom/tests/test_util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_add_metadata.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_show_install_info.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_subset_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_summarize_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_validate_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data
running egg_info
creating biom_format.egg-info
writing biom_format.egg-info/PKG-INFO
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing entry points to biom_format.egg-info/entry_points.txt
writing requirements to biom_format.egg-info/requires.txt
writing top-level names to biom_format.egg-info/top_level.txt
writing manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no directories found matching 'support_files'
warning: no directories found matching 'tests/test_data'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
writing manifest file 'biom_format.egg-info/SOURCES.txt'
copying biom/_filter.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
copying biom/_filter.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
copying biom/_subsample.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
copying biom/_subsample.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
copying biom/_transform.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
copying biom/_transform.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets
copying biom/assets/exercise_api.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets
copying biom/assets/exercise_cli.sh -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_data/bad_table.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/bad_table.txt.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/empty.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/no-contents.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data
running build_ext
building 'biom._filter' extension
creating build
creating build/temp.linux-armhf-3.7
creating build/temp.linux-armhf-3.7/biom
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_filter.c -o build/temp.linux-armhf-3.7/biom/_filter.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from biom/_filter.c:617:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/biom/_filter.o -o /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.cpython-37m-arm-linux-gnueabihf.so
building 'biom._transform' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_transform.c -o build/temp.linux-armhf-3.7/biom/_transform.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from biom/_transform.c:617:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/biom/_transform.o -o /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.cpython-37m-arm-linux-gnueabihf.so
building 'biom._subsample' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_subsample.c -o build/temp.linux-armhf-3.7/biom/_subsample.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from biom/_subsample.c:617:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.7/biom/_subsample.o -o /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so
I: pybuild base:217: /usr/bin/python3 setup.py build
running build
running build_py
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/exception.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/installation_informer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/metadata_adder.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/metadata_exporter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_head.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_ids.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_subsetter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_summarizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/table_validator.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
copying biom/cli/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/long_lines.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/test_err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/test_parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/test_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
copying biom/tests/test_util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_add_metadata.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_show_install_info.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_subset_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_summarize_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_validate_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
running egg_info
writing biom_format.egg-info/PKG-INFO
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing entry points to biom_format.egg-info/entry_points.txt
writing requirements to biom_format.egg-info/requires.txt
writing top-level names to biom_format.egg-info/top_level.txt
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no directories found matching 'support_files'
warning: no directories found matching 'tests/test_data'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
writing manifest file 'biom_format.egg-info/SOURCES.txt'
copying biom/_filter.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/_filter.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/_subsample.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/_subsample.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/_transform.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
copying biom/_transform.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/assets
copying biom/assets/exercise_api.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/assets
copying biom/assets/exercise_cli.sh -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/assets
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_data/bad_table.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/bad_table.txt.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/empty.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/no-contents.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data
running build_ext
building 'biom._filter' extension
creating build/temp.linux-armhf-3.8
creating build/temp.linux-armhf-3.8/biom
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c biom/_filter.c -o build/temp.linux-armhf-3.8/biom/_filter.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from biom/_filter.c:617:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/biom/_filter.o -o /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_filter.cpython-38-arm-linux-gnueabihf.so
building 'biom._transform' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c biom/_transform.c -o build/temp.linux-armhf-3.8/biom/_transform.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from biom/_transform.c:617:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/biom/_transform.o -o /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_transform.cpython-38-arm-linux-gnueabihf.so
building 'biom._subsample' extension
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c biom/_subsample.c -o build/temp.linux-armhf-3.8/biom/_subsample.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1830,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
from biom/_subsample.c:617:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.8/biom/_subsample.o -o /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_subsample.cpython-38-arm-linux-gnueabihf.so
# indep:
PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b html doc build/html
Running Sphinx v1.8.5
making output directory...
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
Failed to import 'biom': no module named biom
Failed to import 'biom.table': no module named biom.table
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 12 source files that are out of date
updating environment: 12 added, 0 changed, 0 removed
reading sources... [ 8%] BIOM_LICENSE
reading sources... [ 16%] documentation/adding_metadata
reading sources... [ 25%] documentation/biom_conversion
reading sources... [ 33%] documentation/biom_format
reading sources... [ 41%] documentation/format_versions/biom-1.0
reading sources... [ 50%] documentation/format_versions/biom-2.0
reading sources... [ 58%] documentation/format_versions/biom-2.1
reading sources... [ 66%] documentation/index
reading sources... [ 75%] documentation/quick_usage_examples
reading sources... [ 83%] documentation/summarizing_biom_tables
reading sources... [ 91%] documentation/table_objects
reading sources... [100%] index
WARNING: autodoc: failed to import module 'biom'; the following exception was raised:
No module named 'biom._filter'
WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised:
No module named 'biom._filter'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
writing output... [ 8%] BIOM_LICENSE
writing output... [ 16%] documentation/adding_metadata
writing output... [ 25%] documentation/biom_conversion
writing output... [ 33%] documentation/biom_format
writing output... [ 41%] documentation/format_versions/biom-1.0
writing output... [ 50%] documentation/format_versions/biom-2.0
writing output... [ 58%] documentation/format_versions/biom-2.1
writing output... [ 66%] documentation/index
writing output... [ 75%] documentation/quick_usage_examples
writing output... [ 83%] documentation/summarizing_biom_tables
writing output... [ 91%] documentation/table_objects
writing output... [100%] index
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated
generating indices...
writing additional pages... search
copying images... [100%] _static/biom-format.png
copying static files... done
copying extra files... done
dumping search index in English (code: en) ... done
dumping object inventory... done
build succeeded, 6 warnings.
The HTML pages are in build/html.
PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b man doc build/man
Running Sphinx v1.8.5
making output directory...
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
Failed to import 'biom': no module named biom
Failed to import 'biom.table': no module named biom.table
building [mo]: targets for 0 po files that are out of date
building [man]: all manpages
updating environment: 12 added, 0 changed, 0 removed
reading sources... [ 8%] BIOM_LICENSE
reading sources... [ 16%] documentation/adding_metadata
reading sources... [ 25%] documentation/biom_conversion
reading sources... [ 33%] documentation/biom_format
reading sources... [ 41%] documentation/format_versions/biom-1.0
reading sources... [ 50%] documentation/format_versions/biom-2.0
reading sources... [ 58%] documentation/format_versions/biom-2.1
reading sources... [ 66%] documentation/index
reading sources... [ 75%] documentation/quick_usage_examples
reading sources... [ 83%] documentation/summarizing_biom_tables
reading sources... [ 91%] documentation/table_objects
reading sources... [100%] index
WARNING: autodoc: failed to import module 'biom'; the following exception was raised:
No module named 'biom._filter'
WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised:
No module named 'biom._filter'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/format_versions/biom-2.1 documentation/quick_usage_examples documentation/table_objects documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE }
build succeeded, 2 warnings.
The manual pages are in build/man.
make[1]: Leaving directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
dh_auto_test -a -O--buildsystem=pybuild
pybuild --test --test-nose -i python{version} -p "3.7 3.8"
I: pybuild pybuild:284: cp -r /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/examples /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build
I: pybuild base:217: cd /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build; python3.7 -m nose -v
Correctly adds observation metadata without casting it. ... ok
Correctly adds observation metadata with casting. ... ok
Correctly adds sample metadata without casting it. ... ok
Correctly adds sample metadata with casting. ... ok
test_default (biom.tests.test_cli.test_show_install_info.TestShowInstallInfo) ... ok
Correctly raises politically correct error upon invalid input. ... ok
Correctly subsets observations in a table. ... ok
Correctly subsets samples in a hdf5 table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py:3981: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
for start, end in indptr_indices)
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py:3983: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
for start, end in indptr_indices)
ok
Correctly subsets samples in a table. ... ok
Correctly subsets samples in a hdf5 table ... ok
TableSummarizer functions as expected ... ok
TableSummarizer functions as expected with qualitative=True ... ok
Correctly converts biom to classic. ... ok
Correctly converts biom to classic with metadata renaming. ... ok
Correctly converts classic to biom. ... ok
Correctly converts classic to biom with metadata. ... ok
Correctly converts json to HDF5 changing the observation metadata ... ok
Correctly converts json to HDF5 changing the sample metadata ... ok
test_bad_inputs (biom.tests.test_cli.test_table_normalizer.TableNormalizerTests) ... ok
test_basic (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_basic_w_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_rep_set_missing_id (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_rep_set_no_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_uc (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_uc_w_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
Correctly invalidates a table that is... invalid. ... ok
Test an invalid HDF5 table ... ok
test_is_int (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok
Correctly validates a table that is indeed... valid. ... ok
validates table:columns: fields ... ok
validates data: fields ... ok
Make sure we have a datetime stamp ... ok
Takes a dense matrix field and validates ... ok
Should match format string ... ok
validates format url ... ok
Should have some string for generated by ... ok
Test a valid HDF5 table ... ok
test_valid_hdf5_metadata_v200 (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok
test_valid_hdf5_metadata_v210 (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok
Make sure we have a valid matrix type ... ok
Make sure we have a valid matrix type ... ok
Can be nullable or an object ... ok
Should just work. ... ok
validates rows: field ... ok
validates shape information ... ok
Takes a sparse matrix field and validates ... ok
Should be valid table type ... ok
test_test_empty (biom.tests.test_err.ErrModeTests) ... ok
test_test_obsdup (biom.tests.test_err.ErrModeTests) ... ok
test_test_obsmdsize (biom.tests.test_err.ErrModeTests) ... ok
test_test_obssize (biom.tests.test_err.ErrModeTests) ... ok
test_test_sampdup (biom.tests.test_err.ErrModeTests) ... ok
test_test_sampmdsize (biom.tests.test_err.ErrModeTests) ... ok
test_test_sampsize (biom.tests.test_err.ErrModeTests) ... ok
test_contains (biom.tests.test_err.ErrorProfileTests) ... ok
test_getcall (biom.tests.test_err.ErrorProfileTests) ... ok
test_handle_error (biom.tests.test_err.ErrorProfileTests) ... ok
test_register_unregister (biom.tests.test_err.ErrorProfileTests) ... ok
test_setcall (biom.tests.test_err.ErrorProfileTests) ... ok
test_state (biom.tests.test_err.ErrorProfileTests) ... ok
test_test (biom.tests.test_err.ErrorProfileTests) ... ok
test_test_evaluation_order (biom.tests.test_err.ErrorProfileTests) ... ok
test_errcheck (biom.tests.test_err.SupportTests) ... ok
test_errstate (biom.tests.test_err.SupportTests) ... ok
test_geterr (biom.tests.test_err.SupportTests) ... ok
test_geterrcall (biom.tests.test_err.SupportTests) ... ok
test_seterr (biom.tests.test_err.SupportTests) ... ok
test_seterrcall (biom.tests.test_err.SupportTests) ... ok
test_empty_metadata_inconsistent_handling (biom.tests.test_parse.ParseTests) ... ok
get a generatedby string ... ok
test_load_table_filepath (biom.tests.test_parse.ParseTests) ... ok
test_load_table_inmemory (biom.tests.test_parse.ParseTests) ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_parse.py:254: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
load_table(h5py.File('test_data/test.biom'))
ok
test_load_table_inmemory_json (biom.tests.test_parse.ParseTests) ... ok
test_load_table_inmemory_stringio (biom.tests.test_parse.ParseTests) ... ok
MetadataMap functions as expected ... ok
MetadataMap functions as expected w user-provided header ... ok
MetadataMap functions as expected w process_fns ... ok
test the biom otu table parser ... ok
tests for parse_biom_table when we do not have h5py ... ok
Make sure we can parse a HDF5 table through the same loader ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_parse.py:238: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
Table.from_hdf5(h5py.File('test_data/test.biom'))
ok
test the biom table parser subsetting ... ok
tests for parse_biom_table when we have h5py ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_parse.py:303: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = parse_biom_table(h5py.File('test_data/test.biom'))
ok
empty uc file returns empty Table ... ok
invalid query sequence identifier detected ... ok
single library seed observed ... ok
single new seed observed ... ok
new and library seeds observed ... ok
multiple new seeds observed ... ok
sample id with underscores is correctly processed ... ok
Yield tables binned by observation metadata ... ok
Yield tables binned by sample metadata ... ok
test_collapse_median (biom.tests.test_table.SparseTableTests) ... ok
Collapse observations by arbitrary metadata ... ok
Collapse observations by arbitary metadata ... ok
Collapse observations by 1-M metadata using divide mode ... ok
Collapse observations by arbitary metadata ... ok
Collapse samples by arbitrary metadata ... ok
Collapse samples by arbitary metadata ... ok
Collapse samples by 1-M metadata using divide mode ... ok
Collapse samples by arbitary metadata ... ok
Should convert other to sparse type ... ok
test_copy_data (biom.tests.test_table.SparseTableTests) ... ok
test_copy_ids (biom.tests.test_table.SparseTableTests) ... ok
test_copy_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_data (biom.tests.test_table.SparseTableTests) ... ok
check equality between tables ... ok
test_data_sparse (biom.tests.test_table.SparseTableTests) ... ok
Print out self in a delimited form ... ok
sparse equality ... ok
Parses a classic table ... ok
test_extract_data_from_tsv_bad_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_extract_data_from_tsv_badvalue_complaint (biom.tests.test_table.SparseTableTests) ... ok
test_filter_general_observation (biom.tests.test_table.SparseTableTests) ... ok
test_filter_general_sample (biom.tests.test_table.SparseTableTests) ... ok
test_filter_id_state (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_id (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_invert (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_remove_everything (biom.tests.test_table.SparseTableTests) ... ok
test_filter_out_full_table (biom.tests.test_table.SparseTableTests) ... ok
test_filter_return_type (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_id (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_invert (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_remove_everything (biom.tests.test_table.SparseTableTests) ... ok
test_filter_table_with_zeros (biom.tests.test_table.SparseTableTests) ... ok
test_filter_using_list_of_ids (biom.tests.test_table.SparseTableTests) ... ok
test_from_json_issue_697 (biom.tests.test_table.SparseTableTests) ... ok
Test correctly computes density of table. ... ok
test_identify_bad_value (biom.tests.test_table.SparseTableTests) ... ok
Should iterate over samples ... ok
test_iter_data_dense (biom.tests.test_table.SparseTableTests) ... ok
test_iter_data_sparse (biom.tests.test_table.SparseTableTests) ... ok
Iterate over observations of sparse matrix ... ok
Iterates data by observations ... ok
Iterates data by observations from a single sample. ... ok
Iterates observations ... ok
Should iterate pairwise over samples ... ok
Should iterate pairwise over samples ... ok
Should iterate pairwise over samples ... ok
Should iterate pairwise over samples ... ok
Iterate over samples of sparse matrix ... ok
Iterates data by samples ... ok
Iterates data by samples with a single observation. ... ok
Iterates samples ... ok
Merge two tables ... ok
Return a list of nonzero positions ... ok
Returns nonzero counts over an axis ... ok
Returns nonzero counts over an axis ... ok
test_nonzero_csc_bug (biom.tests.test_table.SparseTableTests) ... ok
normalize observations by sample ... ok
normalize sample by observation ... ok
test_other_spmatrix_type (biom.tests.test_table.SparseTableTests) ... ok
test_pa (biom.tests.test_table.SparseTableTests) ... ok
test_pa_with_neg (biom.tests.test_table.SparseTableTests) ... ok
test_pa_works_if_something_has_been_zeroed (biom.tests.test_table.SparseTableTests) ... ok
rank observations by sample ... ok
rank observations by sample with alt method ... ok
rank samples by observation ... ok
Reduce method ... ok
table sorted by a function and provided axis ... ok
sorts tables by arbitrary order ... ok
test_subsample (biom.tests.test_table.SparseTableTests) ... ok
test_subsample_by_id (biom.tests.test_table.SparseTableTests) ... ok
test_subsample_by_id_observations_bug (biom.tests.test_table.SparseTableTests) ... ok
test_subsample_byid_with_replacement (biom.tests.test_table.SparseTableTests) ... ok
subsample would except when if metadata were present ... ok
test_subsample_with_replacement_n (biom.tests.test_table.SparseTableTests) ... ok
As in scikit-bio. Given a vector of observations, the total number of ... ok
As in scikit-bio. Given a vector of observations, the total number of ... ok
Test of sum! ... ok
Should convert a self styled vector to numpy type ... ok
Get a BIOM format string for a dense table of floats ... ok
Get a BIOM format string for a dense table of floats ... ok
Get a BIOM format string for a dense table of integers ... ok
Get a BIOM format string for a dense table of integers ... ok
test_to_json_empty (biom.tests.test_table.SparseTableTests) ... ok
Get a BIOM format string for a sparse table of floats ... ok
Get a BIOM format string for a sparse table of floats ... ok
Get a BIOM format string for a sparse table of integers ... ok
Get a BIOM format string for a sparse table of integers ... ok
Transform axis by arbitrary function ... ok
test_transform_return_type (biom.tests.test_table.SparseTableTests) ... ok
test_transform_sample (biom.tests.test_table.SparseTableTests) ... ok
Should transpose a sparse table ... ok
ids are updated as expected ... ok
test_update_ids_cache_bug (biom.tests.test_table.SparseTableTests) ... ok
ids are updated as expected ... ok
test_align_to_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_both (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_observation (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_sample (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_vary_values (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_both (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_both_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_observation (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_observation_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_sample (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_sample_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_concat_different_order (biom.tests.test_table.SupportTests) ... ok
test_concat_empty (biom.tests.test_table.SupportTests) ... ok
test_concat_multiple (biom.tests.test_table.SupportTests) ... ok
test_concat_no_metadata_bug (biom.tests.test_table.SupportTests) ... ok
test_concat_observations (biom.tests.test_table.SupportTests) ... ok
test_concat_pad_on_subset (biom.tests.test_table.SupportTests) ... ok
test_concat_raise_overlap (biom.tests.test_table.SupportTests) ... ok
test_concat_samples (biom.tests.test_table.SupportTests) ... ok
test_concat_table_type (biom.tests.test_table.SupportTests) ... ok
test_head (biom.tests.test_table.SupportTests) ... ok
test_head_bounded (biom.tests.test_table.SupportTests) ... ok
test_head_overstep (biom.tests.test_table.SupportTests) ... ok
test_head_zero_or_neg (biom.tests.test_table.SupportTests) ... ok
returns a dict for list lookups ... ok
prefer x ... ok
test_remove_empty_both (biom.tests.test_table.SupportTests) ... /usr/lib/python3/dist-packages/scipy/sparse/_index.py:126: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
self._set_arrayXarray(i, j, x)
ok
test_remove_empty_identity (biom.tests.test_table.SupportTests) ... ok
test_remove_empty_obs (biom.tests.test_table.SupportTests) ... ok
test_remove_empty_sample (biom.tests.test_table.SupportTests) ... ok
Make sure a TableException can be raised ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
convert (values, (row, col)) to scipy ... ok
Take a dict and convert to sparse ... ok
Take a list of dicts and condense down to a single dict ... ok
convert [[row,col,value], ...] to scipy ... ok
lists of nparrays to sparse ... ok
list of lil_matrix to sparse ... ok
Convert nparray to sparse ... ok
Convert to expected sparse types ... ok
add group metadata works correctly ... ok
add group metadata works with existing metadata ... ok
add_sample_metadata functions with single md entry ... ok
add_sample_metadata functions with existing metadata ... ok
add_metadata functions with more than one md entry ... ok
add_sample_metadata functions with more than one md entry ... ok
test_all_keys_dropped (biom.tests.test_table.TableTests) ... ok
Cast metadata objects to defaultdict to support default values ... ok
Properly converts ScipySparseMat vectors to dense numpy repr. ... ok
test_data_property (biom.tests.test_table.TableTests) ... ok
test_del_metadata_badaxis (biom.tests.test_table.TableTests) ... ok
test_del_metadata_defaults (biom.tests.test_table.TableTests) ... ok
test_del_metadata_empty_list (biom.tests.test_table.TableTests) ... ok
test_del_metadata_full (biom.tests.test_table.TableTests) ... ok
test_del_metadata_idempotent (biom.tests.test_table.TableTests) ... ok
test_del_metadata_jagged (biom.tests.test_table.TableTests) ... ok
test_del_metadata_keys_none_observation (biom.tests.test_table.TableTests) ... ok
test_del_metadata_keys_none_sample (biom.tests.test_table.TableTests) ... ok
test_del_metadata_keys_none_whole (biom.tests.test_table.TableTests) ... ok
test_del_metadata_multiple_keys (biom.tests.test_table.TableTests) ... ok
test_del_metadata_nomd (biom.tests.test_table.TableTests) ... ok
test_del_metadata_partial (biom.tests.test_table.TableTests) ... ok
What's your type? ... ok
Test whether two matrices are equal. ... ok
Verify ValueError raised! ... ok
Parse a hdf5 formatted BIOM table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:629: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'))
ok
test_from_hdf5_custom_parsers (biom.tests.test_table.TableTests) ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:610: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'),
ok
Parse a hdf5 formatted BIOM table w/o metadata ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:595: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/empty.biom'))
ok
HDF5 biom parse successfully loads an empty table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:914: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/empty.biom'))
ok
test_from_hdf5_issue_731 (biom.tests.test_table.TableTests) ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:619: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'))
ok
test_from_hdf5_non_hdf5_file_or_group (biom.tests.test_table.TableTests) ... ok
Parse a observation subset of a hdf5 formatted BIOM table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:835: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'),
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py:3981: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
for start, end in indptr_indices)
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py:3983: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
for start, end in indptr_indices)
ok
Parse a observation subset of a hdf5 formatted BIOM table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:807: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'),
ok
Parse a sample subset of a hdf5 formatted BIOM table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:743: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'), ids=samples)
ok
Parse a sample subset of a hdf5 formatted BIOM table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:715: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'), ids=samples,
ok
hdf5 biom table parse throws error with invalid parameters ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:898: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
Table.from_hdf5(h5py.File('test_data/test.biom'),
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:903: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
Table.from_hdf5(h5py.File('test_data/test.biom'),
ok
test_from_tsv (biom.tests.test_table.TableTests) ... ok
test_from_tsv_dense (biom.tests.test_table.TableTests) ... ok
Test grabbing a column from the matrix. ... ok
Test grabbing a row from the matrix. ... ok
Return the value located in the matrix by the ids ... ok
getitem should work as expeceted ... ok
Test getting an element from the matrix. ... ok
Handles invalid input ... ok
Returns the observation group metadata ... ok
Returns the sample group metadata ... ok
Index all the ids!!! ... ok
Correctly handles invalid input. ... ok
returns the observation index ... ok
returns the sample index ... ok
to_sparse in constructor should be triggered ... ok
Combine ids, intersection ... ok
returns true if empty ... ok
test_length (biom.tests.test_table.TableTests) ... ok
test_max_observation (biom.tests.test_table.TableTests) ... ok
test_max_sample (biom.tests.test_table.TableTests) ... ok
test_max_whole (biom.tests.test_table.TableTests) ... ok
Correctly handles invalid input. ... ok
returns the observation metadata ... ok
returns the observation metadata for a given id ... ok
Return the sample metadata ... ok
returns the sample metadata for a given id ... ok
test_metadata_to_dataframe (biom.tests.test_table.TableTests) ... ok
test_metadata_to_dataframe_badaxis (biom.tests.test_table.TableTests) ... ok
test_metadata_to_dataframe_nomd (biom.tests.test_table.TableTests) ... ok
test_metadata_to_dataframe_uneven_list_metadata (biom.tests.test_table.TableTests) ... ok
test_min_observation (biom.tests.test_table.TableTests) ... ok
test_min_sample (biom.tests.test_table.TableTests) ... ok
test_min_whole (biom.tests.test_table.TableTests) ... ok
Test whether two matrices are not equal. ... ok
What is your NNZ? ... ok
test_nnz_issue_727 (biom.tests.test_table.TableTests) ... /usr/lib/python3/dist-packages/scipy/sparse/_index.py:84: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
self._set_intXint(row, col, x.flat[0])
ok
Verify observation exist! ... ok
__repr__ method of biom.table.Table ... ok
Verify samples exist! ... ok
What kind of shape are you in? ... ok
test_to_dataframe (biom.tests.test_table.TableTests) ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py:1479: FutureWarning: SparseDataFrame is deprecated and will be removed in a future version.
Use a regular DataFrame whose columns are SparseArrays instead.
See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.
default_fill_value=0.0)
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py:4053: FutureWarning: SparseDataFrame is deprecated and will be removed in a future version.
Use a regular DataFrame whose columns are SparseArrays instead.
See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.
return constructor(mat, index=index, columns=columns)
/usr/lib/python3/dist-packages/pandas/core/sparse/frame.py:257: FutureWarning: SparseSeries is deprecated and will be removed in a future version.
Use a Series with sparse values instead.
>>> series = pd.Series(pd.SparseArray(...))
See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.
sparse_index=BlockIndex(N, blocs, blens),
/usr/lib/python3/dist-packages/pandas/core/generic.py:4583: FutureWarning: SparseSeries is deprecated and will be removed in a future version.
Use a Series with sparse values instead.
>>> series = pd.Series(pd.SparseArray(...))
See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.
return self._constructor(new_data).__finalize__(self)
/usr/lib/python3/dist-packages/pandas/core/frame.py:3471: FutureWarning: SparseSeries is deprecated and will be removed in a future version.
Use a Series with sparse values instead.
>>> series = pd.Series(pd.SparseArray(...))
See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.
return klass(values, index=self.index, name=items, fastpath=True)
ok
test_to_dataframe_dense (biom.tests.test_table.TableTests) ... ok
test_to_dataframe_is_sparse (biom.tests.test_table.TableTests) ... ok
Write a file ... ok
test_to_hdf5_custom_formatters (biom.tests.test_table.TableTests) ... ok
Successfully writes an empty OTU table in HDF5 format ... ok
Successfully writes an empty OTU table in HDF5 format ... ok
test_to_hdf5_general_fallback_to_list (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_inconsistent_metadata_categories_observation (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_inconsistent_metadata_categories_sample (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_malformed_taxonomy (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_missing_metadata_observation (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_missing_metadata_sample (biom.tests.test_table.TableTests) ... ok
Print out self in a delimited form ... ok
Combine unique ids, union ... ok
Make sure the metadata is sane (including obs/sample ids) ... ok
test_biom_open_empty (biom.tests.test_util.UtilTests) ... ok
test_biom_open_hdf5 (biom.tests.test_util.UtilTests) ... ok
test_biom_open_hdf5_no_h5py (biom.tests.test_util.UtilTests) ... SKIP: Skipping test: test_biom_open_hdf5_no_h5py: Can only be tested without H5PY
test_biom_open_json (biom.tests.test_util.UtilTests) ... ok
compute_counts_per_sample_stats functions as expected ... ok
test_compute_counts_per_sample_stats_empty (biom.tests.test_util.UtilTests) ... ok
compute_counts_per_sample_stats functions as expected ... ok
flatten should remove one level of nesting from nested sequences ... ok
flatten should not change non-nested sequences (except to list) ... ok
test_generate_subsamples (biom.tests.test_util.UtilTests) ... ok
Getting the biom project directory functions as expected. ... ok
test_is_hdf5_file (biom.tests.test_util.UtilTests) ... ok
test_load_classic (biom.tests.test_util.UtilTests) ... ok
test_load_table_gzip_unicode (biom.tests.test_util.UtilTests) ... ok
test_load_table_unicode (biom.tests.test_util.UtilTests) ... ok
natsort should perform numeric comparisons on strings ... ok
parse_biom_config_files functions as expected. ... ok
Make sure we have the expected md5 with varied input types ... ok
unzip(items) should be the inverse of zip(*items) ... ok
----------------------------------------------------------------------
Ran 343 tests in 56.586s
OK (SKIP=1)
I: pybuild pybuild:284: cp -r /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/examples /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build
I: pybuild base:217: cd /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build; python3.8 -m nose -v
Correctly adds observation metadata without casting it. ... ok
Correctly adds observation metadata with casting. ... ok
Correctly adds sample metadata without casting it. ... ok
Correctly adds sample metadata with casting. ... ok
test_default (biom.tests.test_cli.test_show_install_info.TestShowInstallInfo) ... ok
Correctly raises politically correct error upon invalid input. ... ok
Correctly subsets observations in a table. ... ok
Correctly subsets samples in a hdf5 table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py:3980: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
data = np.hstack(h5_data[start:end]
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py:3982: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
indices = np.hstack(h5_indices[start:end]
ok
Correctly subsets samples in a table. ... ok
Correctly subsets samples in a hdf5 table ... ok
TableSummarizer functions as expected ... ok
TableSummarizer functions as expected with qualitative=True ... ok
Correctly converts biom to classic. ... ok
Correctly converts biom to classic with metadata renaming. ... ok
Correctly converts classic to biom. ... ok
Correctly converts classic to biom with metadata. ... ok
Correctly converts json to HDF5 changing the observation metadata ... ok
Correctly converts json to HDF5 changing the sample metadata ... ok
test_bad_inputs (biom.tests.test_cli.test_table_normalizer.TableNormalizerTests) ... ok
test_basic (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_basic_w_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_rep_set_missing_id (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_rep_set_no_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_uc (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
test_uc_w_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok
Correctly invalidates a table that is... invalid. ... ok
Test an invalid HDF5 table ... ok
test_is_int (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok
Correctly validates a table that is indeed... valid. ... ok
validates table:columns: fields ... ok
validates data: fields ... ok
Make sure we have a datetime stamp ... ok
Takes a dense matrix field and validates ... ok
Should match format string ... ok
validates format url ... ok
Should have some string for generated by ... ok
Test a valid HDF5 table ... ok
test_valid_hdf5_metadata_v200 (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok
test_valid_hdf5_metadata_v210 (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok
Make sure we have a valid matrix type ... ok
Make sure we have a valid matrix type ... ok
Can be nullable or an object ... ok
Should just work. ... ok
validates rows: field ... ok
validates shape information ... ok
Takes a sparse matrix field and validates ... ok
Should be valid table type ... ok
test_test_empty (biom.tests.test_err.ErrModeTests) ... ok
test_test_obsdup (biom.tests.test_err.ErrModeTests) ... ok
test_test_obsmdsize (biom.tests.test_err.ErrModeTests) ... ok
test_test_obssize (biom.tests.test_err.ErrModeTests) ... ok
test_test_sampdup (biom.tests.test_err.ErrModeTests) ... ok
test_test_sampmdsize (biom.tests.test_err.ErrModeTests) ... ok
test_test_sampsize (biom.tests.test_err.ErrModeTests) ... ok
test_contains (biom.tests.test_err.ErrorProfileTests) ... ok
test_getcall (biom.tests.test_err.ErrorProfileTests) ... ok
test_handle_error (biom.tests.test_err.ErrorProfileTests) ... ok
test_register_unregister (biom.tests.test_err.ErrorProfileTests) ... ok
test_setcall (biom.tests.test_err.ErrorProfileTests) ... ok
test_state (biom.tests.test_err.ErrorProfileTests) ... ok
test_test (biom.tests.test_err.ErrorProfileTests) ... ok
test_test_evaluation_order (biom.tests.test_err.ErrorProfileTests) ... ok
test_errcheck (biom.tests.test_err.SupportTests) ... ok
test_errstate (biom.tests.test_err.SupportTests) ... ok
test_geterr (biom.tests.test_err.SupportTests) ... ok
test_geterrcall (biom.tests.test_err.SupportTests) ... ok
test_seterr (biom.tests.test_err.SupportTests) ... ok
test_seterrcall (biom.tests.test_err.SupportTests) ... ok
test_empty_metadata_inconsistent_handling (biom.tests.test_parse.ParseTests) ... ok
get a generatedby string ... ok
test_load_table_filepath (biom.tests.test_parse.ParseTests) ... ok
test_load_table_inmemory (biom.tests.test_parse.ParseTests) ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_parse.py:254: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
load_table(h5py.File('test_data/test.biom'))
ok
test_load_table_inmemory_json (biom.tests.test_parse.ParseTests) ... ok
test_load_table_inmemory_stringio (biom.tests.test_parse.ParseTests) ... ok
MetadataMap functions as expected ... ok
MetadataMap functions as expected w user-provided header ... ok
MetadataMap functions as expected w process_fns ... ok
test the biom otu table parser ... ok
tests for parse_biom_table when we do not have h5py ... ok
Make sure we can parse a HDF5 table through the same loader ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_parse.py:238: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
Table.from_hdf5(h5py.File('test_data/test.biom'))
ok
test the biom table parser subsetting ... ok
tests for parse_biom_table when we have h5py ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_parse.py:303: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = parse_biom_table(h5py.File('test_data/test.biom'))
ok
empty uc file returns empty Table ... ok
invalid query sequence identifier detected ... ok
single library seed observed ... ok
single new seed observed ... ok
new and library seeds observed ... ok
multiple new seeds observed ... ok
sample id with underscores is correctly processed ... ok
Yield tables binned by observation metadata ... ok
Yield tables binned by sample metadata ... ok
test_collapse_median (biom.tests.test_table.SparseTableTests) ... ok
Collapse observations by arbitrary metadata ... ok
Collapse observations by arbitary metadata ... ok
Collapse observations by 1-M metadata using divide mode ... ok
Collapse observations by arbitary metadata ... ok
Collapse samples by arbitrary metadata ... ok
Collapse samples by arbitary metadata ... ok
Collapse samples by 1-M metadata using divide mode ... ok
Collapse samples by arbitary metadata ... ok
Should convert other to sparse type ... ok
test_copy_data (biom.tests.test_table.SparseTableTests) ... ok
test_copy_ids (biom.tests.test_table.SparseTableTests) ... ok
test_copy_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_data (biom.tests.test_table.SparseTableTests) ... ok
check equality between tables ... ok
test_data_sparse (biom.tests.test_table.SparseTableTests) ... ok
Print out self in a delimited form ... ok
sparse equality ... ok
Parses a classic table ... ok
test_extract_data_from_tsv_bad_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_extract_data_from_tsv_badvalue_complaint (biom.tests.test_table.SparseTableTests) ... ok
test_filter_general_observation (biom.tests.test_table.SparseTableTests) ... ok
test_filter_general_sample (biom.tests.test_table.SparseTableTests) ... ok
test_filter_id_state (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_id (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_invert (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_filter_observations_remove_everything (biom.tests.test_table.SparseTableTests) ... ok
test_filter_out_full_table (biom.tests.test_table.SparseTableTests) ... ok
test_filter_return_type (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_id (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_invert (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_metadata (biom.tests.test_table.SparseTableTests) ... ok
test_filter_sample_remove_everything (biom.tests.test_table.SparseTableTests) ... ok
test_filter_table_with_zeros (biom.tests.test_table.SparseTableTests) ... ok
test_filter_using_list_of_ids (biom.tests.test_table.SparseTableTests) ... ok
test_from_json_issue_697 (biom.tests.test_table.SparseTableTests) ... ok
Test correctly computes density of table. ... ok
test_identify_bad_value (biom.tests.test_table.SparseTableTests) ... ok
Should iterate over samples ... ok
test_iter_data_dense (biom.tests.test_table.SparseTableTests) ... ok
test_iter_data_sparse (biom.tests.test_table.SparseTableTests) ... ok
Iterate over observations of sparse matrix ... ok
Iterates data by observations ... ok
Iterates data by observations from a single sample. ... ok
Iterates observations ... ok
Should iterate pairwise over samples ... ok
Should iterate pairwise over samples ... ok
Should iterate pairwise over samples ... ok
Should iterate pairwise over samples ... ok
Iterate over samples of sparse matrix ... ok
Iterates data by samples ... ok
Iterates data by samples with a single observation. ... ok
Iterates samples ... ok
Merge two tables ... ok
Return a list of nonzero positions ... ok
Returns nonzero counts over an axis ... ok
Returns nonzero counts over an axis ... ok
test_nonzero_csc_bug (biom.tests.test_table.SparseTableTests) ... ok
normalize observations by sample ... ok
normalize sample by observation ... ok
test_other_spmatrix_type (biom.tests.test_table.SparseTableTests) ... ok
test_pa (biom.tests.test_table.SparseTableTests) ... ok
test_pa_with_neg (biom.tests.test_table.SparseTableTests) ... ok
test_pa_works_if_something_has_been_zeroed (biom.tests.test_table.SparseTableTests) ... ok
rank observations by sample ... ok
rank observations by sample with alt method ... ok
rank samples by observation ... ok
Reduce method ... ok
table sorted by a function and provided axis ... ok
sorts tables by arbitrary order ... ok
test_subsample (biom.tests.test_table.SparseTableTests) ... ok
test_subsample_by_id (biom.tests.test_table.SparseTableTests) ... ok
test_subsample_by_id_observations_bug (biom.tests.test_table.SparseTableTests) ... ok
test_subsample_byid_with_replacement (biom.tests.test_table.SparseTableTests) ... ok
subsample would except when if metadata were present ... ok
test_subsample_with_replacement_n (biom.tests.test_table.SparseTableTests) ... ok
As in scikit-bio. Given a vector of observations, the total number of ... ok
As in scikit-bio. Given a vector of observations, the total number of ... ok
Test of sum! ... ok
Should convert a self styled vector to numpy type ... ok
Get a BIOM format string for a dense table of floats ... ok
Get a BIOM format string for a dense table of floats ... ok
Get a BIOM format string for a dense table of integers ... ok
Get a BIOM format string for a dense table of integers ... ok
test_to_json_empty (biom.tests.test_table.SparseTableTests) ... ok
Get a BIOM format string for a sparse table of floats ... ok
Get a BIOM format string for a sparse table of floats ... ok
Get a BIOM format string for a sparse table of integers ... ok
Get a BIOM format string for a sparse table of integers ... ok
Transform axis by arbitrary function ... ok
test_transform_return_type (biom.tests.test_table.SparseTableTests) ... ok
test_transform_sample (biom.tests.test_table.SparseTableTests) ... ok
Should transpose a sparse table ... ok
ids are updated as expected ... ok
test_update_ids_cache_bug (biom.tests.test_table.SparseTableTests) ... ok
ids are updated as expected ... ok
test_align_to_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_both (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_observation (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_sample (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_autodetect_vary_values (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_both (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_both_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_observation (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_observation_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_sample (biom.tests.test_table.SupportTests) ... ok
test_align_to_overlap_sample_no_overlap (biom.tests.test_table.SupportTests) ... ok
test_concat_different_order (biom.tests.test_table.SupportTests) ... ok
test_concat_empty (biom.tests.test_table.SupportTests) ... ok
test_concat_multiple (biom.tests.test_table.SupportTests) ... ok
test_concat_no_metadata_bug (biom.tests.test_table.SupportTests) ... ok
test_concat_observations (biom.tests.test_table.SupportTests) ... ok
test_concat_pad_on_subset (biom.tests.test_table.SupportTests) ... ok
test_concat_raise_overlap (biom.tests.test_table.SupportTests) ... ok
test_concat_samples (biom.tests.test_table.SupportTests) ... ok
test_concat_table_type (biom.tests.test_table.SupportTests) ... ok
test_head (biom.tests.test_table.SupportTests) ... ok
test_head_bounded (biom.tests.test_table.SupportTests) ... ok
test_head_overstep (biom.tests.test_table.SupportTests) ... ok
test_head_zero_or_neg (biom.tests.test_table.SupportTests) ... ok
returns a dict for list lookups ... ok
prefer x ... ok
test_remove_empty_both (biom.tests.test_table.SupportTests) ... /usr/lib/python3/dist-packages/scipy/sparse/_index.py:126: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
self._set_arrayXarray(i, j, x)
ok
test_remove_empty_identity (biom.tests.test_table.SupportTests) ... ok
test_remove_empty_obs (biom.tests.test_table.SupportTests) ... ok
test_remove_empty_sample (biom.tests.test_table.SupportTests) ... ok
Make sure a TableException can be raised ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
beat the table sparsely to death ... ok
convert (values, (row, col)) to scipy ... ok
Take a dict and convert to sparse ... ok
Take a list of dicts and condense down to a single dict ... ok
convert [[row,col,value], ...] to scipy ... ok
lists of nparrays to sparse ... ok
list of lil_matrix to sparse ... ok
Convert nparray to sparse ... ok
Convert to expected sparse types ... ok
add group metadata works correctly ... ok
add group metadata works with existing metadata ... ok
add_sample_metadata functions with single md entry ... ok
add_sample_metadata functions with existing metadata ... ok
add_metadata functions with more than one md entry ... ok
add_sample_metadata functions with more than one md entry ... ok
test_all_keys_dropped (biom.tests.test_table.TableTests) ... ok
Cast metadata objects to defaultdict to support default values ... ok
Properly converts ScipySparseMat vectors to dense numpy repr. ... ok
test_data_property (biom.tests.test_table.TableTests) ... ok
test_del_metadata_badaxis (biom.tests.test_table.TableTests) ... ok
test_del_metadata_defaults (biom.tests.test_table.TableTests) ... ok
test_del_metadata_empty_list (biom.tests.test_table.TableTests) ... ok
test_del_metadata_full (biom.tests.test_table.TableTests) ... ok
test_del_metadata_idempotent (biom.tests.test_table.TableTests) ... ok
test_del_metadata_jagged (biom.tests.test_table.TableTests) ... ok
test_del_metadata_keys_none_observation (biom.tests.test_table.TableTests) ... ok
test_del_metadata_keys_none_sample (biom.tests.test_table.TableTests) ... ok
test_del_metadata_keys_none_whole (biom.tests.test_table.TableTests) ... ok
test_del_metadata_multiple_keys (biom.tests.test_table.TableTests) ... ok
test_del_metadata_nomd (biom.tests.test_table.TableTests) ... ok
test_del_metadata_partial (biom.tests.test_table.TableTests) ... ok
What's your type? ... ok
Test whether two matrices are equal. ... ok
Verify ValueError raised! ... ok
Parse a hdf5 formatted BIOM table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:629: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'))
ok
test_from_hdf5_custom_parsers (biom.tests.test_table.TableTests) ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:610: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'),
ok
Parse a hdf5 formatted BIOM table w/o metadata ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:595: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/empty.biom'))
ok
HDF5 biom parse successfully loads an empty table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:914: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/empty.biom'))
ok
test_from_hdf5_issue_731 (biom.tests.test_table.TableTests) ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:619: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'))
ok
test_from_hdf5_non_hdf5_file_or_group (biom.tests.test_table.TableTests) ... ok
Parse a observation subset of a hdf5 formatted BIOM table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:835: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'),
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py:3980: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
data = np.hstack(h5_data[start:end]
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py:3982: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
indices = np.hstack(h5_indices[start:end]
ok
Parse a observation subset of a hdf5 formatted BIOM table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:807: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'),
ok
Parse a sample subset of a hdf5 formatted BIOM table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:743: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'), ids=samples)
ok
Parse a sample subset of a hdf5 formatted BIOM table ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:715: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
t = Table.from_hdf5(h5py.File('test_data/test.biom'), ids=samples,
ok
hdf5 biom table parse throws error with invalid parameters ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:898: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
Table.from_hdf5(h5py.File('test_data/test.biom'),
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:903: H5pyDeprecationWarning: The default file mode will change to 'r' (read-only) in h5py 3.0. To suppress this warning, pass the mode you need to h5py.File(), or set the global default h5.get_config().default_file_mode, or set the environment variable H5PY_DEFAULT_READONLY=1. Available modes are: 'r', 'r+', 'w', 'w-'/'x', 'a'. See the docs for details.
Table.from_hdf5(h5py.File('test_data/test.biom'),
ok
test_from_tsv (biom.tests.test_table.TableTests) ... ok
test_from_tsv_dense (biom.tests.test_table.TableTests) ... ok
Test grabbing a column from the matrix. ... ok
Test grabbing a row from the matrix. ... ok
Return the value located in the matrix by the ids ... ok
getitem should work as expeceted ... ok
Test getting an element from the matrix. ... ok
Handles invalid input ... ok
Returns the observation group metadata ... ok
Returns the sample group metadata ... ok
Index all the ids!!! ... ok
Correctly handles invalid input. ... ok
returns the observation index ... ok
returns the sample index ... ok
to_sparse in constructor should be triggered ... ok
Combine ids, intersection ... ok
returns true if empty ... ok
test_length (biom.tests.test_table.TableTests) ... ok
test_max_observation (biom.tests.test_table.TableTests) ... ok
test_max_sample (biom.tests.test_table.TableTests) ... ok
test_max_whole (biom.tests.test_table.TableTests) ... ok
Correctly handles invalid input. ... ok
returns the observation metadata ... ok
returns the observation metadata for a given id ... ok
Return the sample metadata ... ok
returns the sample metadata for a given id ... ok
test_metadata_to_dataframe (biom.tests.test_table.TableTests) ... ok
test_metadata_to_dataframe_badaxis (biom.tests.test_table.TableTests) ... ok
test_metadata_to_dataframe_nomd (biom.tests.test_table.TableTests) ... ok
test_metadata_to_dataframe_uneven_list_metadata (biom.tests.test_table.TableTests) ... ok
test_min_observation (biom.tests.test_table.TableTests) ... ok
test_min_sample (biom.tests.test_table.TableTests) ... ok
test_min_whole (biom.tests.test_table.TableTests) ... ok
Test whether two matrices are not equal. ... ok
What is your NNZ? ... ok
test_nnz_issue_727 (biom.tests.test_table.TableTests) ... /usr/lib/python3/dist-packages/scipy/sparse/_index.py:84: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
self._set_intXint(row, col, x.flat[0])
ok
Verify observation exist! ... ok
__repr__ method of biom.table.Table ... ok
Verify samples exist! ... ok
What kind of shape are you in? ... ok
test_to_dataframe (biom.tests.test_table.TableTests) ... /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py:1476: FutureWarning: SparseDataFrame is deprecated and will be removed in a future version.
Use a regular DataFrame whose columns are SparseArrays instead.
See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.
exp = pd.SparseDataFrame(np.array([[0.0, 1.0, 2.0], [3.0, 4.0, 5.0]]),
/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py:4053: FutureWarning: SparseDataFrame is deprecated and will be removed in a future version.
Use a regular DataFrame whose columns are SparseArrays instead.
See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.
return constructor(mat, index=index, columns=columns)
/usr/lib/python3/dist-packages/pandas/core/sparse/frame.py:253: FutureWarning: SparseSeries is deprecated and will be removed in a future version.
Use a Series with sparse values instead.
>>> series = pd.Series(pd.SparseArray(...))
See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.
sdict[columns[col]] = SparseSeries(
/usr/lib/python3/dist-packages/pandas/core/generic.py:4583: FutureWarning: SparseSeries is deprecated and will be removed in a future version.
Use a Series with sparse values instead.
>>> series = pd.Series(pd.SparseArray(...))
See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.
return self._constructor(new_data).__finalize__(self)
/usr/lib/python3/dist-packages/pandas/core/frame.py:3471: FutureWarning: SparseSeries is deprecated and will be removed in a future version.
Use a Series with sparse values instead.
>>> series = pd.Series(pd.SparseArray(...))
See http://pandas.pydata.org/pandas-docs/stable/user_guide/sparse.html#migrating for more.
return klass(values, index=self.index, name=items, fastpath=True)
ok
test_to_dataframe_dense (biom.tests.test_table.TableTests) ... ok
test_to_dataframe_is_sparse (biom.tests.test_table.TableTests) ... ok
Write a file ... ok
test_to_hdf5_custom_formatters (biom.tests.test_table.TableTests) ... ok
Successfully writes an empty OTU table in HDF5 format ... ok
Successfully writes an empty OTU table in HDF5 format ... ok
test_to_hdf5_general_fallback_to_list (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_inconsistent_metadata_categories_observation (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_inconsistent_metadata_categories_sample (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_malformed_taxonomy (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_missing_metadata_observation (biom.tests.test_table.TableTests) ... ok
test_to_hdf5_missing_metadata_sample (biom.tests.test_table.TableTests) ... ok
Print out self in a delimited form ... ok
Combine unique ids, union ... ok
Make sure the metadata is sane (including obs/sample ids) ... ok
test_biom_open_empty (biom.tests.test_util.UtilTests) ... ok
test_biom_open_hdf5 (biom.tests.test_util.UtilTests) ... ok
test_biom_open_hdf5_no_h5py (biom.tests.test_util.UtilTests) ... SKIP: Skipping test: test_biom_open_hdf5_no_h5py: Can only be tested without H5PY
test_biom_open_json (biom.tests.test_util.UtilTests) ... ok
compute_counts_per_sample_stats functions as expected ... ok
test_compute_counts_per_sample_stats_empty (biom.tests.test_util.UtilTests) ... ok
compute_counts_per_sample_stats functions as expected ... ok
flatten should remove one level of nesting from nested sequences ... ok
flatten should not change non-nested sequences (except to list) ... ok
test_generate_subsamples (biom.tests.test_util.UtilTests) ... ok
Getting the biom project directory functions as expected. ... ok
test_is_hdf5_file (biom.tests.test_util.UtilTests) ... ok
test_load_classic (biom.tests.test_util.UtilTests) ... ok
test_load_table_gzip_unicode (biom.tests.test_util.UtilTests) ... ok
test_load_table_unicode (biom.tests.test_util.UtilTests) ... ok
natsort should perform numeric comparisons on strings ... ok
parse_biom_config_files functions as expected. ... ok
Make sure we have the expected md5 with varied input types ... ok
unzip(items) should be the inverse of zip(*items) ... ok
----------------------------------------------------------------------
Ran 343 tests in 54.288s
OK (SKIP=1)
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
rm -f -- debian/python3-biom-format.substvars
rm -fr -- debian/.debhelper/generated/python3-biom-format/ debian/python3-biom-format/ debian/tmp/
dh_auto_install -a -O--buildsystem=pybuild
install -d /<<BUILDDIR>>/python-biom-format-2.1.8\+dfsg/debian/tmp
pybuild --install --test-nose -i python{version} -p "3.7 3.8" --dest-dir /<<BUILDDIR>>/python-biom-format-2.1.8\+dfsg/debian/tmp
I: pybuild base:217: /usr/bin/python3.7 setup.py install --root /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format
running install
running build
running build_py
running egg_info
writing biom_format.egg-info/PKG-INFO
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing entry points to biom_format.egg-info/entry_points.txt
writing requirements to biom_format.egg-info/requires.txt
writing top-level names to biom_format.egg-info/top_level.txt
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no directories found matching 'support_files'
warning: no directories found matching 'tests/test_data'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
writing manifest file 'biom_format.egg-info/SOURCES.txt'
running build_ext
running install_lib
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/exception.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/installation_informer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/metadata_adder.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/metadata_exporter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_head.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_ids.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_subsetter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_summarizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_validator.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/__init__.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_summarizer.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/metadata_adder.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/util.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/metadata_exporter.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_converter.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/installation_informer.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_subsetter.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_normalizer.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_head.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_ids.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_validator.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/uc_processor.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/long_lines.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_add_metadata.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_show_install_info.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_subset_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_summarize_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_validate_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_data
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/__init__.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_add_metadata.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_show_install_info.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_subset_table.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_summarize_table.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_table_converter.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_table_normalizer.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_uc_processor.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_validate_table.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/bad_table.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/bad_table.txt.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/empty.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/no-contents.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/test.json.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/__pycache__/__init__.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/__init__.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/long_lines.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/test_err.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/test_parse.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/test_table.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/test_util.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets/exercise_api.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets/exercise_cli.sh -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.cpython-37m-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.cpython-37m-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/__init__.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/table.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/exception.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/util.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/err.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/parse.cpython-37.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/min_sparse_otu_table.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/obs_md.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/rich_sparse_otu_table.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/sam_md.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/err.py to err.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/exception.py to exception.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/parse.py to parse.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/table.py to table.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/util.py to util.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__init__.py to __init__.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__init__.py to __init__.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/installation_informer.py to installation_informer.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/metadata_adder.py to metadata_adder.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/metadata_exporter.py to metadata_exporter.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_converter.py to table_converter.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_head.py to table_head.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_ids.py to table_ids.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_normalizer.py to table_normalizer.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_subsetter.py to table_subsetter.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_summarizer.py to table_summarizer.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_validator.py to table_validator.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/uc_processor.py to uc_processor.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/util.py to util.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__init__.py to __init__.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/long_lines.py to long_lines.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_err.py to test_err.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_parse.py to test_parse.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_table.py to test_table.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_util.py to test_util.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__init__.py to __init__.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_add_metadata.py to test_add_metadata.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_show_install_info.py to test_show_install_info.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_subset_table.py to test_subset_table.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_summarize_table.py to test_summarize_table.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_table_converter.py to test_table_converter.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_table_normalizer.py to test_table_normalizer.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_uc_processor.py to test_uc_processor.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_validate_table.py to test_validate_table.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data/__init__.py to __init__.cpython-37.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets/exercise_api.py to exercise_api.cpython-37.pyc
running install_egg_info
Copying biom_format.egg-info to /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom_format-2.1.8.egg-info
Skipping SOURCES.txt
running install_scripts
Installing biom script to /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/bin
I: pybuild pybuild:310: dh_numpy3
(grep -a -s -v python3:Depends debian/python3-biom-format.substvars; echo "python3:Depends=python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9") > debian/python3-biom-format.substvars.new
mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars
(grep -a -s -v python3:Depends debian/python-biom-format-doc.substvars; echo python3:Depends=python3-numpy) > debian/python-biom-format-doc.substvars.new
mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars
I: pybuild base:217: /usr/bin/python3 setup.py install --root /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format
running install
running build
running build_py
running egg_info
writing biom_format.egg-info/PKG-INFO
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing entry points to biom_format.egg-info/entry_points.txt
writing requirements to biom_format.egg-info/requires.txt
writing top-level names to biom_format.egg-info/top_level.txt
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no directories found matching 'support_files'
warning: no directories found matching 'tests/test_data'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
writing manifest file 'biom_format.egg-info/SOURCES.txt'
running build_ext
running install_lib
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/exception.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/installation_informer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/metadata_adder.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/metadata_exporter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_head.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_ids.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_subsetter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_summarizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/table_validator.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/__init__.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_summarizer.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/metadata_adder.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/util.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/metadata_exporter.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_converter.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/installation_informer.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_subsetter.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_normalizer.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_head.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_ids.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/table_validator.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/cli/__pycache__/uc_processor.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/long_lines.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_err.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_parse.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_util.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_add_metadata.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_show_install_info.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_subset_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_summarize_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_table_converter.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_table_normalizer.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_uc_processor.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_validate_table.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_data
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/__init__.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_add_metadata.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_show_install_info.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_subset_table.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_summarize_table.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_table_converter.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_table_normalizer.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_uc_processor.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_cli/__pycache__/test_validate_table.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/__init__.py -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/bad_table.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/bad_table.txt.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/empty.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/no-contents.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/test.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/test.json -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/test.json.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/test_data/__pycache__/__init__.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/bench_tables
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
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copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__pycache__/long_lines.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__pycache__/test_err.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__pycache__/test_parse.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__pycache__/test_table.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/tests/__pycache__/test_util.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_filter.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_filter.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_subsample.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_subsample.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_transform.c -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_transform.pyx -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/assets
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copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/assets/exercise_cli.sh -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/assets
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_filter.cpython-38-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_transform.cpython-38-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/_subsample.cpython-38-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/__init__.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/table.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/exception.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/util.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/err.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/biom/__pycache__/parse.cpython-38.pyc -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__pycache__
creating /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/min_sparse_otu_table.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/obs_md.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/rich_sparse_otu_table.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
copying /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/.pybuild/cpython3_3.8_biom-format/build/examples/sam_md.txt -> /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/examples
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/err.py to err.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/exception.py to exception.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/parse.py to parse.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/table.py to table.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/util.py to util.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/__init__.py to __init__.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/__init__.py to __init__.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/installation_informer.py to installation_informer.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/metadata_adder.py to metadata_adder.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/metadata_exporter.py to metadata_exporter.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_converter.py to table_converter.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_head.py to table_head.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_ids.py to table_ids.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_normalizer.py to table_normalizer.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_subsetter.py to table_subsetter.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_summarizer.py to table_summarizer.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/table_validator.py to table_validator.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/uc_processor.py to uc_processor.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/cli/util.py to util.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/__init__.py to __init__.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/long_lines.py to long_lines.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_err.py to test_err.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_parse.py to test_parse.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_table.py to test_table.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_util.py to test_util.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/__init__.py to __init__.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_add_metadata.py to test_add_metadata.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_show_install_info.py to test_show_install_info.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_subset_table.py to test_subset_table.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_summarize_table.py to test_summarize_table.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_table_converter.py to test_table_converter.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_table_normalizer.py to test_table_normalizer.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_uc_processor.py to test_uc_processor.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_cli/test_validate_table.py to test_validate_table.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/tests/test_data/__init__.py to __init__.cpython-38.pyc
byte-compiling /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom/assets/exercise_api.py to exercise_api.cpython-38.pyc
running install_egg_info
Copying biom_format.egg-info to /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/lib/python3.8/dist-packages/biom_format-2.1.8.egg-info
Skipping SOURCES.txt
running install_scripts
Installing biom script to /<<BUILDDIR>>/python-biom-format-2.1.8+dfsg/debian/python3-biom-format/usr/bin
I: pybuild pybuild:310: dh_numpy3
(grep -a -s -v python3:Depends debian/python3-biom-format.substvars; echo "python3:Depends=python3-numpy (>= 1:1.16.0~rc1), python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, python3-numpy-abi9") > debian/python3-biom-format.substvars.new
mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars
(grep -a -s -v python3:Depends debian/python-biom-format-doc.substvars; echo python3:Depends=python3-numpy) > debian/python-biom-format-doc.substvars.new
mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars
dh_installdocs -a -O--buildsystem=pybuild
install -d debian/python3-biom-format/usr/share/doc/python3-biom-format
install -d debian/.debhelper/generated/python3-biom-format
cp --reflink=auto -a ./debian/README.test debian/python3-biom-format/usr/share/doc/python3-biom-format
cp --reflink=auto -a ./debian/tests/run-unit-test debian/python3-biom-format/usr/share/doc/python3-biom-format
chmod -R u\+rw,go=rX debian/python3-biom-format/usr/share/doc
install -p -m0644 debian/copyright debian/python3-biom-format/usr/share/doc/python3-biom-format/copyright
install -d debian/.debhelper/generated/python-biom-format-doc
dh_sphinxdoc -a -O--buildsystem=pybuild
dh_sphinxdoc: warning: Sphinx documentation not found
dh_installchangelogs -a -O--buildsystem=pybuild
install -p -m0644 debian/changelog debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog.Debian
install -p -m0644 ./ChangeLog.md debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog
rm -f debian/python3-biom-format.debhelper.log
debian/rules override_dh_installexamples
make[1]: Entering directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
dh_installexamples
install -d debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/min_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/min_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/obs_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/rich_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/rich_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
cp --reflink=auto -a ./examples/sam_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
find debian -name "*.c" -delete
find debian -name "*.pyx" -delete
# move tests from Python3 package to examples package
if [ ! -d biom/tests ] ; then \
mv `find debian/python*biom-format -name tests -type d` biom ; \
else \
find debian/python*biom-format -name tests -type d | xargs rm -rf ; \
fi
make[1]: Leaving directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
dh_python3 -a -O--buildsystem=pybuild
D: dh_python3 dh_python3:161: version: 4.20200315
D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild']
D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': True, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'}
D: dh_python3 dh_python3:164: args: []
D: dh_python3 dh_python3:165: supported Python versions: 3.7,3.8 (default=3.8)
D: dh_python3 debhelper:107: skipping package: python-biom-format-doc
D: dh_python3 debhelper:152: source=python-biom-format, binary packages=['python3-biom-format']
D: dh_python3 dh_python3:183: processing package python3-biom-format...
D: dh_python3 fs:49: moving files from debian/python3-biom-format/usr/lib/python3.7/dist-packages to debian/python3-biom-format/usr/lib/python3/dist-packages/
D: dh_python3 tools:232: invoking: /usr/bin/python3.7 -c 'import sysconfig as s;print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))'
D: dh_python3 fs:49: moving files from debian/python3-biom-format/usr/lib/python3.8/dist-packages to debian/python3-biom-format/usr/lib/python3/dist-packages/
D: dh_python3 fs:260: package python3-biom-format details = {'requires.txt': {'debian/python3-biom-format/usr/lib/python3/dist-packages/biom_format-2.1.8.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.8'), Version('3.7')}, 'ext_no_version': set()}
D: dh_python3 depends:117: generating dependencies for package python3-biom-format
D: dh_python3 pydist:137: trying to find dependency for click (python=None)
D: dh_python3 pydist:137: trying to find dependency for cython>=0.29 (python=None)
D: dh_python3 pydist:137: trying to find dependency for future>=0.16.0 (python=None)
D: dh_python3 pydist:137: trying to find dependency for numpy>=1.9.2 (python=None)
D: dh_python3 pydist:137: trying to find dependency for pandas>=0.20.0 (python=None)
D: dh_python3 pydist:137: trying to find dependency for scipy>=1.3.1 (python=None)
D: dh_python3 pydist:137: trying to find dependency for six>=1.10.0 (python=None)
D: dh_python3 depends:275: D={'python3-six (>= 1.10.0)', 'python3-numpy', 'python3-future', 'cython3', 'python3-click', 'python3 (>= 3.7~)', 'python3:any', 'python3 (<< 3.9)', 'python3-scipy', 'python3-pandas'}; R=[]; S=[]; E=[], B=[]; RT=[]
dh_installinit -a -O--buildsystem=pybuild
dh_installsystemduser -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
cd debian/python3-biom-format
chmod a-x usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian
gzip -9nf usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian
cd '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
rm -f debian/python3-biom-format.debhelper.log
debian/rules override_dh_fixperms
make[1]: Entering directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
dh_fixperms
find debian/python3-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/python3-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/python3-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biom-format/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
find debian/python3-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian -name exercise_cli.sh -exec chmod +x \{\} \;
make[1]: Leaving directory '/<<BUILDDIR>>/python-biom-format-2.1.8+dfsg'
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
install -d debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf
dwz -mdebian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug -M/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug -- debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-38-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-38-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-38-arm-linux-gnueabihf.so
objcopy --compress-debug-sections debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug
dh_strip -a -O--buildsystem=pybuild
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/bf
objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/bf/7ed281b21e28e8cd9ab33a034188b66c278c9d.debug
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/bf/7ed281b21e28e8cd9ab33a034188b66c278c9d.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-arm-linux-gnueabihf.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/bf/7ed281b21e28e8cd9ab33a034188b66c278c9d.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-arm-linux-gnueabihf.so
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/ad
objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-38-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/ad/129c0c5f76a7e193bcf7c3ad48b91c236d5000.debug
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/ad/129c0c5f76a7e193bcf7c3ad48b91c236d5000.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-38-arm-linux-gnueabihf.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/ad/129c0c5f76a7e193bcf7c3ad48b91c236d5000.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-38-arm-linux-gnueabihf.so
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b0
objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b0/ab86ea5427bc6e67096fd74617fddef15bfadf.debug
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b0/ab86ea5427bc6e67096fd74617fddef15bfadf.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b0/ab86ea5427bc6e67096fd74617fddef15bfadf.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d9
objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-38-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d9/b0f2c5a2080a96ec67e7a9bf3d07b367041596.debug
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d9/b0f2c5a2080a96ec67e7a9bf3d07b367041596.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-38-arm-linux-gnueabihf.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/d9/b0f2c5a2080a96ec67e7a9bf3d07b367041596.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-38-arm-linux-gnueabihf.so
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/f7
objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/f7/2f5a1e05a5b111b718d030ba48c733352e8b8d.debug
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/f7/2f5a1e05a5b111b718d030ba48c733352e8b8d.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-arm-linux-gnueabihf.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/f7/2f5a1e05a5b111b718d030ba48c733352e8b8d.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-arm-linux-gnueabihf.so
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/31
objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-38-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/31/8c1bf61b712a52d4403aeb2352a5b1d693cfd1.debug
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/31/8c1bf61b712a52d4403aeb2352a5b1d693cfd1.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-38-arm-linux-gnueabihf.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/31/8c1bf61b712a52d4403aeb2352a5b1d693cfd1.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-38-arm-linux-gnueabihf.so
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz
cp --reflink=auto -a debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz
rm -fr debian/python3-biom-format/usr/lib/debug/.dwz
rmdir -p --ignore-fail-on-non-empty debian/python3-biom-format/usr/lib/debug
install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc
ln -s python3-biom-format debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc/python3-biom-format-dbgsym
dh_makeshlibs -a -O--buildsystem=pybuild
rm -f debian/python3-biom-format/DEBIAN/shlibs
dh_shlibdeps -a -O--buildsystem=pybuild
install -d debian/python3-biom-format/DEBIAN
dpkg-shlibdeps -Tdebian/python3-biom-format.substvars debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-38-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-38-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-38-arm-linux-gnueabihf.so
dh_installdeb -a -O--buildsystem=pybuild
printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/postinst
cat debian/python3-biom-format.postinst.debhelper >> debian/python3-biom-format/DEBIAN/postinst
chmod 0755 -- debian/python3-biom-format/DEBIAN/postinst
printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/prerm
cat debian/python3-biom-format.prerm.debhelper >> debian/python3-biom-format/DEBIAN/prerm
chmod 0755 -- debian/python3-biom-format/DEBIAN/prerm
dh_gencontrol -a -O--buildsystem=pybuild
echo misc:Depends= >> debian/python3-biom-format.substvars
echo misc:Pre-Depends= >> debian/python3-biom-format.substvars
install -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN
dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/.debhelper/python3-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=python3-biom-format-dbgsym "-DDepends=python3-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python3-biom-format" "-DBuild-Ids=318c1bf61b712a52d4403aeb2352a5b1d693cfd1 ad129c0c5f76a7e193bcf7c3ad48b91c236d5000 b0ab86ea5427bc6e67096fd74617fddef15bfadf bf7ed281b21e28e8cd9ab33a034188b66c278c9d d9b0f2c5a2080a96ec67e7a9bf3d07b367041596 f72f5a1e05a5b111b718d030ba48c733352e8b8d" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Versions} unused, but is defined
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control
dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/python3-biom-format -UMulti-Arch
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Versions} unused, but is defined
chmod 0644 -- debian/python3-biom-format/DEBIAN/control
dh_md5sums -a -O--buildsystem=pybuild
cd debian/python3-biom-format >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/python3-biom-format/DEBIAN/md5sums
cd debian/.debhelper/python3-biom-format/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb --root-owner-group --build debian/python3-biom-format ..
dpkg-deb --root-owner-group --build debian/.debhelper/python3-biom-format/dbgsym-root ..
dpkg-deb: building package 'python3-biom-format-dbgsym' in '../python3-biom-format-dbgsym_2.1.8+dfsg-2_armhf.deb'.
dpkg-deb: building package 'python3-biom-format' in '../python3-biom-format_2.1.8+dfsg-2_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../python-biom-format_2.1.8+dfsg-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-04-09T18:14:33Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
python-biom-format_2.1.8+dfsg-2_armhf.changes:
----------------------------------------------
Format: 1.8
Date: Fri, 03 Apr 2020 23:18:06 +0200
Source: python-biom-format
Binary: python3-biom-format python3-biom-format-dbgsym
Architecture: armhf
Version: 2.1.8+dfsg-2
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
python3-biom-format - Biological Observation Matrix (BIOM) format (Python 3)
Closes: 955662
Changes:
python-biom-format (2.1.8+dfsg-2) unstable; urgency=medium
.
* Build-Depends: python3-matplotlib
Closes: #955662
* Standards-Version: 4.5.0 (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Use secure URI in Homepage field.
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Files:
a55af26bf3f46cfe3c5e74ffee1031bd 8830 python optional python-biom-format_2.1.8+dfsg-2_armhf.buildinfo
7cf318c2c3596eae621c5c39b31fcd6c 476644 debug optional python3-biom-format-dbgsym_2.1.8+dfsg-2_armhf.deb
b729a72b24db43d5a4557e1403a00b2f 155852 python optional python3-biom-format_2.1.8+dfsg-2_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
python3-biom-format-dbgsym_2.1.8+dfsg-2_armhf.deb
-------------------------------------------------
new Debian package, version 2.0.
size 476644 bytes: control archive=864 bytes.
632 bytes, 12 lines control
735 bytes, 7 lines md5sums
Package: python3-biom-format-dbgsym
Source: python-biom-format
Version: 2.1.8+dfsg-2
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 562
Depends: python3-biom-format (= 2.1.8+dfsg-2)
Section: debug
Priority: optional
Description: debug symbols for python3-biom-format
Build-Ids: 318c1bf61b712a52d4403aeb2352a5b1d693cfd1 ad129c0c5f76a7e193bcf7c3ad48b91c236d5000 b0ab86ea5427bc6e67096fd74617fddef15bfadf bf7ed281b21e28e8cd9ab33a034188b66c278c9d d9b0f2c5a2080a96ec67e7a9bf3d07b367041596 f72f5a1e05a5b111b718d030ba48c733352e8b8d
drwxr-xr-x root/root 0 2020-04-03 21:18 ./
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/debug/.build-id/31/
-rw-r--r-- root/root 51548 2020-04-03 21:18 ./usr/lib/debug/.build-id/31/8c1bf61b712a52d4403aeb2352a5b1d693cfd1.debug
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/debug/.build-id/ad/
-rw-r--r-- root/root 138876 2020-04-03 21:18 ./usr/lib/debug/.build-id/ad/129c0c5f76a7e193bcf7c3ad48b91c236d5000.debug
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/debug/.build-id/b0/
-rw-r--r-- root/root 81380 2020-04-03 21:18 ./usr/lib/debug/.build-id/b0/ab86ea5427bc6e67096fd74617fddef15bfadf.debug
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/debug/.build-id/bf/
-rw-r--r-- root/root 113848 2020-04-03 21:18 ./usr/lib/debug/.build-id/bf/7ed281b21e28e8cd9ab33a034188b66c278c9d.debug
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/debug/.build-id/d9/
-rw-r--r-- root/root 96836 2020-04-03 21:18 ./usr/lib/debug/.build-id/d9/b0f2c5a2080a96ec67e7a9bf3d07b367041596.debug
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/debug/.build-id/f7/
-rw-r--r-- root/root 46668 2020-04-03 21:18 ./usr/lib/debug/.build-id/f7/2f5a1e05a5b111b718d030ba48c733352e8b8d.debug
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 25004 2020-04-03 21:18 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/share/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-04-03 21:18 ./usr/share/doc/python3-biom-format-dbgsym -> python3-biom-format
python3-biom-format_2.1.8+dfsg-2_armhf.deb
------------------------------------------
new Debian package, version 2.0.
size 155852 bytes: control archive=2812 bytes.
1964 bytes, 36 lines control
4671 bytes, 50 lines md5sums
263 bytes, 12 lines * postinst #!/bin/sh
412 bytes, 12 lines * prerm #!/bin/sh
Package: python3-biom-format
Source: python-biom-format
Version: 2.1.8+dfsg-2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 902
Depends: python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, cython3, python3 (<< 3.9), python3 (>= 3.7~), python3-click, python3-future, python3-pandas, python3-scipy, python3-six (>= 1.10.0), python3:any, libc6 (>= 2.4)
Suggests: python-biom-format-doc
Breaks: biom-format-tools (<< 2.1.7+dfsg-3)
Replaces: biom-format-tools (<< 2.1.7+dfsg-3)
Provides: biom-format-tools
Section: python
Priority: optional
Homepage: https://biom-format.org/
Description: Biological Observation Matrix (BIOM) format (Python 3)
The BIOM file format (canonically pronounced biome) is designed to be a
general-use format for representing biological sample by observation
contingency tables. BIOM is a recognized standard for the Earth
Microbiome Project and is a Genomics Standards Consortium candidate
project.
.
The BIOM format is designed for general use in broad areas of
comparative -omics. For example, in marker-gene surveys, the primary use
of this format is to represent OTU tables: the observations in this case
are OTUs and the matrix contains counts corresponding to the number of
times each OTU is observed in each sample. With respect to metagenome
data, this format would be used to represent metagenome tables: the
observations in this case might correspond to SEED subsystems, and the
matrix would contain counts corresponding to the number of times each
subsystem is observed in each metagenome. Similarly, with respect to
genome data, this format may be used to represent a set of genomes: the
observations in this case again might correspond to SEED subsystems, and
the counts would correspond to the number of times each subsystem is
observed in each genome.
.
This package provides the BIOM format library for the Python 3 interpreter.
drwxr-xr-x root/root 0 2020-04-03 21:18 ./
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/bin/
-rwxr-xr-x root/root 388 2020-04-03 21:18 ./usr/bin/biom
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/python3/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom/
-rw-r--r-- root/root 2521 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom/__init__.py
-rw-r--r-- root/root 85324 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom/_filter.cpython-37m-arm-linux-gnueabihf.so
-rw-r--r-- root/root 85324 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom/_filter.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root 64568 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-arm-linux-gnueabihf.so
-rw-r--r-- root/root 60472 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom/_subsample.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root 40072 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom/_transform.cpython-37m-arm-linux-gnueabihf.so
-rw-r--r-- root/root 40072 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom/_transform.cpython-38-arm-linux-gnueabihf.so
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom/assets/
-rw-r--r-- root/root 3582 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/assets/exercise_api.py
-rwxr-xr-x root/root 2205 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom/assets/exercise_cli.sh
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom/cli/
-rw-r--r-- root/root 1286 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/__init__.py
-rw-r--r-- root/root 3505 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/installation_informer.py
-rw-r--r-- root/root 7632 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/metadata_adder.py
-rw-r--r-- root/root 1879 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/metadata_exporter.py
-rw-r--r-- root/root 8852 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/table_converter.py
-rw-r--r-- root/root 1471 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/table_head.py
-rw-r--r-- root/root 1166 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/table_ids.py
-rw-r--r-- root/root 2711 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/table_normalizer.py
-rw-r--r-- root/root 5381 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/table_subsetter.py
-rw-r--r-- root/root 5382 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/table_summarizer.py
-rw-r--r-- root/root 20321 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/table_validator.py
-rw-r--r-- root/root 2950 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/uc_processor.py
-rw-r--r-- root/root 1062 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/cli/util.py
-rw-r--r-- root/root 14330 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/err.py
-rw-r--r-- root/root 1450 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/exception.py
-rw-r--r-- root/root 22631 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/parse.py
-rw-r--r-- root/root 180866 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/table.py
-rw-r--r-- root/root 16655 2020-01-07 02:01 ./usr/lib/python3/dist-packages/biom/util.py
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom_format-2.1.8.egg-info/
-rw-r--r-- root/root 1508 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom_format-2.1.8.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom_format-2.1.8.egg-info/dependency_links.txt
-rw-r--r-- root/root 63 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom_format-2.1.8.egg-info/entry_points.txt
-rw-r--r-- root/root 20 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom_format-2.1.8.egg-info/requires.txt
-rw-r--r-- root/root 5 2020-04-03 21:18 ./usr/lib/python3/dist-packages/biom_format-2.1.8.egg-info/top_level.txt
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/lib/python3/dist-packages/examples/
-rw-r--r-- root/root 1343 2020-04-03 21:18 ./usr/lib/python3/dist-packages/examples/min_sparse_otu_table.biom
-rw-r--r-- root/root 33800 2020-04-03 21:18 ./usr/lib/python3/dist-packages/examples/min_sparse_otu_table_hdf5.biom
-rw-r--r-- root/root 555 2020-04-03 21:18 ./usr/lib/python3/dist-packages/examples/obs_md.txt
-rw-r--r-- root/root 3431 2020-04-03 21:18 ./usr/lib/python3/dist-packages/examples/rich_sparse_otu_table.biom
-rw-r--r-- root/root 46952 2020-04-03 21:18 ./usr/lib/python3/dist-packages/examples/rich_sparse_otu_table_hdf5.biom
-rw-r--r-- root/root 244 2020-04-03 21:18 ./usr/lib/python3/dist-packages/examples/sam_md.txt
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/share/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/share/doc/python3-biom-format/
-rw-r--r-- root/root 278 2020-04-03 21:18 ./usr/share/doc/python3-biom-format/README.test
-rw-r--r-- root/root 3228 2020-04-03 21:18 ./usr/share/doc/python3-biom-format/changelog.Debian.gz
-rw-r--r-- root/root 8789 2020-01-07 02:01 ./usr/share/doc/python3-biom-format/changelog.gz
-rw-r--r-- root/root 1613 2020-04-03 21:18 ./usr/share/doc/python3-biom-format/copyright
drwxr-xr-x root/root 0 2020-04-03 21:18 ./usr/share/doc/python3-biom-format/examples/
-rw-r--r-- root/root 1343 2020-01-07 02:01 ./usr/share/doc/python3-biom-format/examples/min_sparse_otu_table.biom
-rw-r--r-- root/root 33800 2020-01-07 02:01 ./usr/share/doc/python3-biom-format/examples/min_sparse_otu_table_hdf5.biom
-rw-r--r-- root/root 555 2020-01-07 02:01 ./usr/share/doc/python3-biom-format/examples/obs_md.txt
-rw-r--r-- root/root 3431 2020-01-07 02:01 ./usr/share/doc/python3-biom-format/examples/rich_sparse_otu_table.biom
-rw-r--r-- root/root 46952 2020-01-07 02:01 ./usr/share/doc/python3-biom-format/examples/rich_sparse_otu_table_hdf5.biom
-rw-r--r-- root/root 244 2020-01-07 02:01 ./usr/share/doc/python3-biom-format/examples/sam_md.txt
-rw-r--r-- root/root 979 2020-04-03 21:18 ./usr/share/doc/python3-biom-format/run-unit-test
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 167640
Build-Time: 414
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1495
Job: python-biom-format_2.1.8+dfsg-2
Machine Architecture: armhf
Package: python-biom-format
Package-Time: 1963
Source-Version: 2.1.8+dfsg-2
Space: 167640
Status: successful
Version: 2.1.8+dfsg-2
--------------------------------------------------------------------------------
Finished at 2020-04-09T18:14:33Z
Build needed 00:32:43, 167640k disc space