Build log for python-biom-format (2.1.15.2-3) on armhf

python-biom-format → 2.1.15.2-3 → armhf → 2024-02-21 11:24:29

sbuild (Debian sbuild) 0.85.0 (04 January 2023) on test2023

+==============================================================================+
| python-biom-format 2.1.15.2-3 (armhf)        Wed, 21 Feb 2024 11:20:44 +0000 |
+==============================================================================+

Package: python-biom-format
Version: 2.1.15.2-3
Source Version: 2.1.15.2-3
Distribution: trixie-staging
Machine Architecture: arm64
Host Architecture: armhf
Build Architecture: armhf
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/trixie-staging-armhf-sbuild-9a3cf3d9-6054-469b-bcc3-3a5e876139d9' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/python-biom-format-9I3DNK/resolver-Wq7Pec' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.4.1/private trixie-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private trixie-staging/main Sources [14.5 MB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf Packages [15.1 MB]
Fetched 29.6 MB in 5s (5547 kB/s)
Reading package lists...
W: http://172.17.4.1/private/dists/trixie-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'python-biom-format' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-biom-format.git
Please use:
git clone https://salsa.debian.org/med-team/python-biom-format.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 11.9 MB of source archives.
Get:1 http://172.17.4.1/private trixie-staging/main python-biom-format 2.1.15.2-3 (dsc) [1883 B]
Get:2 http://172.17.4.1/private trixie-staging/main python-biom-format 2.1.15.2-3 (tar) [11.9 MB]
Get:3 http://172.17.4.1/private trixie-staging/main python-biom-format 2.1.15.2-3 (diff) [11.5 kB]
Fetched 11.9 MB in 1s (8191 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/python-biom-format-9I3DNK/python-biom-format-2.1.15.2' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-biom-format-9I3DNK' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-h5py, python3-numpy, python3-numpydoc, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-h5py, python3-numpy, python3-numpydoc, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [898 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [908 B]
Fetched 2415 B in 0s (0 B/s)
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bash-completion blt bsdextrautils
  ca-certificates cython3 debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism docutils-common dwz file fontconfig-config
  fonts-dejavu-core fonts-dejavu-mono fonts-lyx gettext gettext-base
  groff-base help2man intltool-debian libaec0 libarchive-zip-perl libblas3
  libbrotli1 libbsd0 libcbor0.10 libcurl4 libdebhelper-perl libdeflate0
  libedit2 libelf1 libevent-core-2.1-7 libevent-pthreads-2.1-7 libexpat1
  libexpat1-dev libfabric1 libfido2-1 libfile-stripnondeterminism-perl
  libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0
  libgraphite2-3 libharfbuzz0b libhdf5-openmpi-103-1 libhdf5-openmpi-hl-100
  libhwloc-plugins libhwloc15 libibverbs1 libicu72 libimagequant0 libjbig0
  libjpeg62-turbo libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen
  libjs-jquery-metadata libjs-jquery-tablesorter
  libjs-jquery-throttle-debounce libjs-jquery-ui libjs-sphinxdoc
  libjs-underscore libjson-perl liblapack3 liblbfgsb0 liblcms2-2 liblerc4
  liblzf1 libmagic-mgc libmagic1 libmunge2 libnghttp2-14 libnl-3-200
  libnl-route-3-200 libopenjp2-7 libopenmpi3 libpciaccess0 libpipeline1
  libpmix2 libpng16-16 libpsl5 libpython3-all-dev libpython3-dev
  libpython3-stdlib libpython3.11 libpython3.11-dev libpython3.11-minimal
  libpython3.11-stdlib libpython3.12 libpython3.12-dev libpython3.12-minimal
  libpython3.12-stdlib libqhull-r8.0 libraqm0 librdmacm1 librtmp1 libsharpyuv0
  libssh2-1 libsub-override-perl libsz2 libtcl8.6 libtiff6 libtk8.6 libtool
  libuchardet0 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6
  libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxnvctrl0 libxrender1
  libxslt1.1 libxss1 m4 man-db media-types mpi-default-bin netbase
  ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssl
  po-debconf python-babel-localedata python-matplotlib-data python3
  python3-alabaster python3-all python3-all-dev python3-appdirs python3-attr
  python3-babel python3-brotli python3-certifi python3-chardet
  python3-charset-normalizer python3-click python3-colorama python3-contourpy
  python3-coverage python3-cycler python3-dateutil python3-decorator
  python3-dev python3-distutils python3-docutils python3-fonttools python3-fs
  python3-h5py python3-h5py-mpi python3-idna python3-imagesize
  python3-iniconfig python3-jinja2 python3-kiwisolver python3-lib2to3
  python3-lxml python3-lz4 python3-markupsafe python3-matplotlib
  python3-minimal python3-mpi4py python3-mpmath python3-numpy python3-numpydoc
  python3-packaging python3-pandas python3-pandas-lib python3-pil
  python3-pil.imagetk python3-pkg-resources python3-pluggy python3-pygments
  python3-pyparsing python3-pytest python3-pytest-cov python3-requests
  python3-roman python3-scipy python3-setuptools python3-six
  python3-snowballstemmer python3-sphinx python3-sympy python3-tabulate
  python3-tk python3-tz python3-ufolib2 python3-urllib3 python3.11
  python3.11-dev python3.11-minimal python3.12 python3.12-dev
  python3.12-minimal sensible-utils sgml-base sphinx-common tk8.6-blt2.5
  unicode-data x11-common xml-core zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc blt-demo cython-doc dh-make flit
  python3-build python3-installer python3-wheel gettext-doc libasprintf-dev
  libgettextpo-dev groff low-memory-monitor libjs-jquery-ui-docs
  liblcms2-utils pciutils tcl8.6 tk8.6 libtool-doc gfortran
  | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser opencl-icd
  gfortran | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass
  libmail-box-perl python3-doc python3-venv python-attr-doc
  python-charset-normalizer-doc python-coverage-doc python-cycler-doc
  docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french
  texlive-latex-base texlive-latex-recommended python-h5py-doc
  python-jinja2-doc python-lxml-doc cm-super-minimal dvipng ffmpeg
  fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common
  python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-pyqt5
  python3-sip python3-tornado texlive-extra-utils texlive-latex-extra
  python-mpmath-doc python3-gmpy2 gfortran python-pandas-doc
  python3-statsmodels python-pil-doc python-pygments-doc ttf-bitstream-vera
  python-pyparsing-doc python3-cryptography python3-openssl python3-socks
  python-requests-doc python-scipy-doc python-setuptools-doc python3-stemmer
  fonts-freefont-otf imagemagick-6.q16 latexmk libjs-mathjax
  python3-sphinx-rtd-theme sphinx-doc tex-gyre texlive-fonts-recommended
  texlive-plain-generic texlive-fonts-extra python-sympy-doc tix
  python3-tk-dbg python3.11-venv python3.11-doc binfmt-support python3.12-venv
  python3.12-doc sgml-base-doc
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
  xdg-user-dirs ibverbs-providers javascript-common libjson-xs-perl
  publicsuffix libltdl-dev xauth libmail-sendmail-perl libpaper-utils
  python3-bs4 python3-cssselect python3-html5lib python3-bottleneck
  python3-numexpr python3-odf python3-openpyxl python3-tables python3-olefile
  isympy-common
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bash-completion blt bsdextrautils
  ca-certificates cython3 debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism docutils-common dwz file fontconfig-config
  fonts-dejavu-core fonts-dejavu-mono fonts-lyx gettext gettext-base
  groff-base help2man intltool-debian libaec0 libarchive-zip-perl libblas3
  libbrotli1 libbsd0 libcbor0.10 libcurl4 libdebhelper-perl libdeflate0
  libedit2 libelf1 libevent-core-2.1-7 libevent-pthreads-2.1-7 libexpat1
  libexpat1-dev libfabric1 libfido2-1 libfile-stripnondeterminism-perl
  libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0
  libgraphite2-3 libharfbuzz0b libhdf5-openmpi-103-1 libhdf5-openmpi-hl-100
  libhwloc-plugins libhwloc15 libibverbs1 libicu72 libimagequant0 libjbig0
  libjpeg62-turbo libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen
  libjs-jquery-metadata libjs-jquery-tablesorter
  libjs-jquery-throttle-debounce libjs-jquery-ui libjs-sphinxdoc
  libjs-underscore libjson-perl liblapack3 liblbfgsb0 liblcms2-2 liblerc4
  liblzf1 libmagic-mgc libmagic1 libmunge2 libnghttp2-14 libnl-3-200
  libnl-route-3-200 libopenjp2-7 libopenmpi3 libpciaccess0 libpipeline1
  libpmix2 libpng16-16 libpsl5 libpython3-all-dev libpython3-dev
  libpython3-stdlib libpython3.11 libpython3.11-dev libpython3.11-minimal
  libpython3.11-stdlib libpython3.12 libpython3.12-dev libpython3.12-minimal
  libpython3.12-stdlib libqhull-r8.0 libraqm0 librdmacm1 librtmp1 libsharpyuv0
  libssh2-1 libsub-override-perl libsz2 libtcl8.6 libtiff6 libtk8.6 libtool
  libuchardet0 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6
  libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxnvctrl0 libxrender1
  libxslt1.1 libxss1 m4 man-db media-types mpi-default-bin netbase
  ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssl
  po-debconf python-babel-localedata python-matplotlib-data python3
  python3-alabaster python3-all python3-all-dev python3-appdirs python3-attr
  python3-babel python3-brotli python3-certifi python3-chardet
  python3-charset-normalizer python3-click python3-colorama python3-contourpy
  python3-coverage python3-cycler python3-dateutil python3-decorator
  python3-dev python3-distutils python3-docutils python3-fonttools python3-fs
  python3-h5py python3-h5py-mpi python3-idna python3-imagesize
  python3-iniconfig python3-jinja2 python3-kiwisolver python3-lib2to3
  python3-lxml python3-lz4 python3-markupsafe python3-matplotlib
  python3-minimal python3-mpi4py python3-mpmath python3-numpy python3-numpydoc
  python3-packaging python3-pandas python3-pandas-lib python3-pil
  python3-pil.imagetk python3-pkg-resources python3-pluggy python3-pygments
  python3-pyparsing python3-pytest python3-pytest-cov python3-requests
  python3-roman python3-scipy python3-setuptools python3-six
  python3-snowballstemmer python3-sphinx python3-sympy python3-tabulate
  python3-tk python3-tz python3-ufolib2 python3-urllib3 python3.11
  python3.11-dev python3.11-minimal python3.12 python3.12-dev
  python3.12-minimal sbuild-build-depends-main-dummy sensible-utils sgml-base
  sphinx-common tk8.6-blt2.5 unicode-data x11-common xml-core zlib1g-dev
0 upgraded, 218 newly installed, 0 to remove and 0 not upgraded.
Need to get 130 MB of archives.
After this operation, 551 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [976 B]
Get:2 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB]
Get:4 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-minimal armhf 3.11.8-1 [801 kB]
Get:5 http://172.17.4.1/private trixie-staging/main armhf libexpat1 armhf 2.5.0-2 [76.8 kB]
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Get:7 http://172.17.4.1/private trixie-staging/main armhf python3-minimal armhf 3.11.6-1 [26.2 kB]
Get:8 http://172.17.4.1/private trixie-staging/main armhf media-types all 10.1.0 [26.9 kB]
Get:9 http://172.17.4.1/private trixie-staging/main armhf netbase all 6.4 [12.8 kB]
Get:10 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-stdlib armhf 3.11.8-1 [1697 kB]
Get:11 http://172.17.4.1/private trixie-staging/main armhf python3.11 armhf 3.11.8-1 [597 kB]
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Get:13 http://172.17.4.1/private trixie-staging/main armhf python3 armhf 3.11.6-1 [26.2 kB]
Get:14 http://172.17.4.1/private trixie-staging/main armhf libpython3.12-minimal armhf 3.12.2-1 [792 kB]
Get:15 http://172.17.4.1/private trixie-staging/main armhf python3.12-minimal armhf 3.12.2-1 [1798 kB]
Get:16 http://172.17.4.1/private trixie-staging/main armhf sgml-base all 1.31 [15.4 kB]
Get:17 http://172.17.4.1/private trixie-staging/main armhf libuchardet0 armhf 0.0.8-1 [65.5 kB]
Get:18 http://172.17.4.1/private trixie-staging/main armhf groff-base armhf 1.23.0-3 [1033 kB]
Get:19 http://172.17.4.1/private trixie-staging/main armhf bsdextrautils armhf 2.39.3-6 [81.4 kB]
Get:20 http://172.17.4.1/private trixie-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:21 http://172.17.4.1/private trixie-staging/main armhf man-db armhf 2.12.0-3 [1358 kB]
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Get:23 http://172.17.4.1/private trixie-staging/main armhf bash-completion all 1:2.11-8 [224 kB]
Get:24 http://172.17.4.1/private trixie-staging/main armhf openssl armhf 3.1.5-1 [1190 kB]
Get:25 http://172.17.4.1/private trixie-staging/main armhf ca-certificates all 20240203 [158 kB]
Get:26 http://172.17.4.1/private trixie-staging/main armhf libmagic-mgc armhf 1:5.45-2 [314 kB]
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Get:28 http://172.17.4.1/private trixie-staging/main armhf file armhf 1:5.45-2 [41.6 kB]
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Get:34 http://172.17.4.1/private trixie-staging/main armhf openssh-client armhf 1:9.6p1-3 [802 kB]
Get:35 http://172.17.4.1/private trixie-staging/main armhf m4 armhf 1.4.19-4 [256 kB]
Get:36 http://172.17.4.1/private trixie-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:37 http://172.17.4.1/private trixie-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:38 http://172.17.4.1/private trixie-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
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Get:73 http://172.17.4.1/private trixie-staging/main armhf gettext armhf 0.21-14 [1203 kB]
Get:74 http://172.17.4.1/private trixie-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:75 http://172.17.4.1/private trixie-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:76 http://172.17.4.1/private trixie-staging/main armhf debhelper all 13.13 [889 kB]
Get:77 http://172.17.4.1/private trixie-staging/main armhf python3-lib2to3 all 3.11.5-1 [77.5 kB]
Get:78 http://172.17.4.1/private trixie-staging/main armhf python3-distutils all 3.11.5-1 [131 kB]
Get:79 http://172.17.4.1/private trixie-staging/main armhf python3-pkg-resources all 68.1.2-2 [241 kB]
Get:80 http://172.17.4.1/private trixie-staging/main armhf python3-setuptools all 68.1.2-2 [468 kB]
Get:81 http://172.17.4.1/private trixie-staging/main armhf dh-python all 6.20231223 [108 kB]
Get:82 http://172.17.4.1/private trixie-staging/main armhf xml-core all 0.19 [20.1 kB]
Get:83 http://172.17.4.1/private trixie-staging/main armhf docutils-common all 0.20.1+dfsg-3 [128 kB]
Get:84 http://172.17.4.1/private trixie-staging/main armhf fonts-lyx all 2.4.0~RC3-1 [189 kB]
Get:85 http://172.17.4.1/private trixie-staging/main armhf help2man armhf 1.49.3 [198 kB]
Get:86 http://172.17.4.1/private trixie-staging/main armhf libaec0 armhf 1.1.2-1 [21.3 kB]
Get:87 http://172.17.4.1/private trixie-staging/main armhf libblas3 armhf 3.12.0-3 [102 kB]
Get:88 http://172.17.4.1/private trixie-staging/main armhf libnghttp2-14 armhf 1.59.0-1 [61.9 kB]
Get:89 http://172.17.4.1/private trixie-staging/main armhf libpsl5 armhf 0.21.2-1+b1 [57.8 kB]
Get:90 http://172.17.4.1/private trixie-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:91 http://172.17.4.1/private trixie-staging/main armhf libssh2-1 armhf 1.11.0-4 [195 kB]
Get:92 http://172.17.4.1/private trixie-staging/main armhf libcurl4 armhf 8.5.0-2+rpi1 [377 kB]
Get:93 http://172.17.4.1/private trixie-staging/main armhf libdeflate0 armhf 1.19-1 [39.0 kB]
Get:94 http://172.17.4.1/private trixie-staging/main armhf libevent-core-2.1-7 armhf 2.1.12-stable-8 [119 kB]
Get:95 http://172.17.4.1/private trixie-staging/main armhf libevent-pthreads-2.1-7 armhf 2.1.12-stable-8 [53.2 kB]
Get:96 http://172.17.4.1/private trixie-staging/main armhf libexpat1-dev armhf 2.5.0-2 [130 kB]
Get:97 http://172.17.4.1/private trixie-staging/main armhf libnl-3-200 armhf 3.7.0-0.3 [51.5 kB]
Get:98 http://172.17.4.1/private trixie-staging/main armhf libnl-route-3-200 armhf 3.7.0-0.3 [149 kB]
Get:99 http://172.17.4.1/private trixie-staging/main armhf libibverbs1 armhf 48.0-1.1 [53.8 kB]
Get:100 http://172.17.4.1/private trixie-staging/main armhf librdmacm1 armhf 48.0-1.1 [60.2 kB]
Get:101 http://172.17.4.1/private trixie-staging/main armhf libfabric1 armhf 1.17.0-3 [376 kB]
Get:102 http://172.17.4.1/private trixie-staging/main armhf libfribidi0 armhf 1.0.13-3 [69.9 kB]
Get:103 http://172.17.4.1/private trixie-staging/main armhf libgfortran5 armhf 13.2.0-9+rpi1 [247 kB]
Get:104 http://172.17.4.1/private trixie-staging/main armhf libglib2.0-0 armhf 2.78.4-1 [1259 kB]
Get:105 http://172.17.4.1/private trixie-staging/main armhf libgraphite2-3 armhf 1.3.14-2 [62.8 kB]
Get:106 http://172.17.4.1/private trixie-staging/main armhf libharfbuzz0b armhf 8.3.0-2 [2152 kB]
Get:107 http://172.17.4.1/private trixie-staging/main armhf libhwloc15 armhf 2.10.0-1 [131 kB]
Get:108 http://172.17.4.1/private trixie-staging/main armhf libmunge2 armhf 0.5.15-3 [15.8 kB]
Get:109 http://172.17.4.1/private trixie-staging/main armhf libpciaccess0 armhf 0.17-3 [49.1 kB]
Get:110 http://172.17.4.1/private trixie-staging/main armhf libxnvctrl0 armhf 525.147.05-1 [12.4 kB]
Get:111 http://172.17.4.1/private trixie-staging/main armhf ocl-icd-libopencl1 armhf 2.3.2-1 [36.8 kB]
Get:112 http://172.17.4.1/private trixie-staging/main armhf libhwloc-plugins armhf 2.10.0-1 [16.1 kB]
Get:113 http://172.17.4.1/private trixie-staging/main armhf libpmix2 armhf 5.0.1-4 [528 kB]
Get:114 http://172.17.4.1/private trixie-staging/main armhf libopenmpi3 armhf 4.1.6-5+rpi1 [1792 kB]
Get:115 http://172.17.4.1/private trixie-staging/main armhf libsz2 armhf 1.1.2-1 [7700 B]
Get:116 http://172.17.4.1/private trixie-staging/main armhf libhdf5-openmpi-103-1 armhf 1.10.10+repack-3 [1268 kB]
Get:117 http://172.17.4.1/private trixie-staging/main armhf libhdf5-openmpi-hl-100 armhf 1.10.10+repack-3 [59.9 kB]
Get:118 http://172.17.4.1/private trixie-staging/main armhf libimagequant0 armhf 2.18.0-1 [30.5 kB]
Get:119 http://172.17.4.1/private trixie-staging/main armhf libjbig0 armhf 2.1-6.1 [27.0 kB]
Get:120 http://172.17.4.1/private trixie-staging/main armhf libjpeg62-turbo armhf 1:2.1.5-2 [143 kB]
Get:121 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-isonscreen all 1.2.0-1.1 [3196 B]
Get:122 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-metadata all 12-4 [6532 B]
Get:123 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [184 kB]
Get:124 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.2 kB]
Get:125 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get:126 http://172.17.4.1/private trixie-staging/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:127 http://172.17.4.1/private trixie-staging/main armhf libjs-sphinxdoc all 7.2.6-4 [150 kB]
Get:128 http://172.17.4.1/private trixie-staging/main armhf libjson-perl all 4.10000-1 [87.5 kB]
Get:129 http://172.17.4.1/private trixie-staging/main armhf liblapack3 armhf 3.12.0-3 [1692 kB]
Get:130 http://172.17.4.1/private trixie-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.4-1 [24.4 kB]
Get:131 http://172.17.4.1/private trixie-staging/main armhf liblcms2-2 armhf 2.14-2 [124 kB]
Get:132 http://172.17.4.1/private trixie-staging/main armhf liblerc4 armhf 4.0.0+ds-4 [132 kB]
Get:133 http://172.17.4.1/private trixie-staging/main armhf liblzf1 armhf 3.6-4 [9296 B]
Get:134 http://172.17.4.1/private trixie-staging/main armhf libopenjp2-7 armhf 2.5.0-2+b2 [165 kB]
Get:135 http://172.17.4.1/private trixie-staging/main armhf libpython3.11 armhf 3.11.8-1 [1670 kB]
Get:136 http://172.17.4.1/private trixie-staging/main armhf zlib1g-dev armhf 1:1.3.dfsg-3 [903 kB]
Get:137 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-dev armhf 3.11.8-1 [3284 kB]
Get:138 http://172.17.4.1/private trixie-staging/main armhf libpython3-dev armhf 3.11.6-1 [9456 B]
Get:139 http://172.17.4.1/private trixie-staging/main armhf libpython3.12-stdlib armhf 3.12.2-1 [1785 kB]
Get:140 http://172.17.4.1/private trixie-staging/main armhf libpython3.12 armhf 3.12.2-1 [1798 kB]
Get:141 http://172.17.4.1/private trixie-staging/main armhf libpython3.12-dev armhf 3.12.2-1 [4121 kB]
Get:142 http://172.17.4.1/private trixie-staging/main armhf libpython3-all-dev armhf 3.11.6-1 [1072 B]
Get:143 http://172.17.4.1/private trixie-staging/main armhf libqhull-r8.0 armhf 2020.2-6 [216 kB]
Get:144 http://172.17.4.1/private trixie-staging/main armhf libraqm0 armhf 0.10.1-1 [11.7 kB]
Get:145 http://172.17.4.1/private trixie-staging/main armhf libsharpyuv0 armhf 1.3.2-0.3 [106 kB]
Get:146 http://172.17.4.1/private trixie-staging/main armhf libwebp7 armhf 1.3.2-0.3 [261 kB]
Get:147 http://172.17.4.1/private trixie-staging/main armhf libtiff6 armhf 4.5.1+git230720-4 [299 kB]
Get:148 http://172.17.4.1/private trixie-staging/main armhf libwebpdemux2 armhf 1.3.2-0.3 [106 kB]
Get:149 http://172.17.4.1/private trixie-staging/main armhf libwebpmux3 armhf 1.3.2-0.3 [116 kB]
Get:150 http://172.17.4.1/private trixie-staging/main armhf libxslt1.1 armhf 1.1.35-1 [221 kB]
Get:151 http://172.17.4.1/private trixie-staging/main armhf openmpi-common all 4.1.6-5+rpi1 [166 kB]
Get:152 http://172.17.4.1/private trixie-staging/main armhf openmpi-bin armhf 4.1.6-5+rpi1 [193 kB]
Get:153 http://172.17.4.1/private trixie-staging/main armhf mpi-default-bin armhf 1.15 [2408 B]
Get:154 http://172.17.4.1/private trixie-staging/main armhf python-babel-localedata all 2.10.3-3 [5611 kB]
Get:155 http://172.17.4.1/private trixie-staging/main armhf python-matplotlib-data all 3.6.3-1 [2744 kB]
Get:156 http://172.17.4.1/private trixie-staging/main armhf python3-alabaster all 0.7.12-1 [20.8 kB]
Get:157 http://172.17.4.1/private trixie-staging/main armhf python3.12 armhf 3.12.2-1 [653 kB]
Get:158 http://172.17.4.1/private trixie-staging/main armhf python3-all armhf 3.11.6-1 [1060 B]
Get:159 http://172.17.4.1/private trixie-staging/main armhf python3.11-dev armhf 3.11.8-1 [508 kB]
Get:160 http://172.17.4.1/private trixie-staging/main armhf python3-dev armhf 3.11.6-1 [26.1 kB]
Get:161 http://172.17.4.1/private trixie-staging/main armhf python3.12-dev armhf 3.12.2-1 [506 kB]
Get:162 http://172.17.4.1/private trixie-staging/main armhf python3-all-dev armhf 3.11.6-1 [1076 B]
Get:163 http://172.17.4.1/private trixie-staging/main armhf python3-appdirs all 1.4.4-4 [12.5 kB]
Get:164 http://172.17.4.1/private trixie-staging/main armhf python3-attr all 23.2.0-1 [65.5 kB]
Get:165 http://172.17.4.1/private trixie-staging/main armhf python3-tz all 2024.1-1 [30.8 kB]
Get:166 http://172.17.4.1/private trixie-staging/main armhf python3-babel all 2.10.3-3 [100.0 kB]
Get:167 http://172.17.4.1/private trixie-staging/main armhf python3-brotli armhf 1.1.0-2 [290 kB]
Get:168 http://172.17.4.1/private trixie-staging/main armhf python3-certifi all 2023.11.17-1 [155 kB]
Get:169 http://172.17.4.1/private trixie-staging/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB]
Get:170 http://172.17.4.1/private trixie-staging/main armhf python3-charset-normalizer all 3.3.2-1 [51.6 kB]
Get:171 http://172.17.4.1/private trixie-staging/main armhf python3-colorama all 0.4.6-4 [36.2 kB]
Get:172 http://172.17.4.1/private trixie-staging/main armhf python3-click all 8.1.6-1 [93.8 kB]
Get:173 http://172.17.4.1/private trixie-staging/main armhf python3-numpy armhf 1:1.24.2-2 [3164 kB]
Get:174 http://172.17.4.1/private trixie-staging/main armhf python3-contourpy armhf 1.0.7-1 [141 kB]
Get:175 http://172.17.4.1/private trixie-staging/main armhf python3-coverage armhf 7.2.7+dfsg1-1 [166 kB]
Get:176 http://172.17.4.1/private trixie-staging/main armhf python3-cycler all 0.11.0-1 [8020 B]
Get:177 http://172.17.4.1/private trixie-staging/main armhf python3-six all 1.16.0-4 [17.5 kB]
Get:178 http://172.17.4.1/private trixie-staging/main armhf python3-dateutil all 2.8.2-3 [78.4 kB]
Get:179 http://172.17.4.1/private trixie-staging/main armhf python3-decorator all 5.1.1-5 [15.1 kB]
Get:180 http://172.17.4.1/private trixie-staging/main armhf python3-roman all 3.3-3 [9880 B]
Get:181 http://172.17.4.1/private trixie-staging/main armhf python3-docutils all 0.20.1+dfsg-3 [389 kB]
Get:182 http://172.17.4.1/private trixie-staging/main armhf python3-scipy armhf 1.10.1-5+rpi1 [13.6 MB]
Get:183 http://172.17.4.1/private trixie-staging/main armhf python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB]
Get:184 http://172.17.4.1/private trixie-staging/main armhf python3-mpmath all 1.2.1-2 [418 kB]
Get:185 http://172.17.4.1/private trixie-staging/main armhf python3-sympy all 1.12-7 [3869 kB]
Get:186 http://172.17.4.1/private trixie-staging/main armhf python3-fs all 2.4.16-3 [95.3 kB]
Get:187 http://172.17.4.1/private trixie-staging/main armhf python3-lxml armhf 5.1.0-1 [1119 kB]
Get:188 http://172.17.4.1/private trixie-staging/main armhf python3-lz4 armhf 4.0.2+dfsg-1+b1 [23.9 kB]
Get:189 http://172.17.4.1/private trixie-staging/main armhf unicode-data all 15.1.0-1 [8547 kB]
Get:190 http://172.17.4.1/private trixie-staging/main armhf python3-fonttools armhf 4.46.0-1 [1271 kB]
Get:191 http://172.17.4.1/private trixie-staging/main armhf python3-mpi4py armhf 3.1.5-4 [380 kB]
Get:192 http://172.17.4.1/private trixie-staging/main armhf python3-h5py-mpi armhf 3.9.0-5 [729 kB]
Get:193 http://172.17.4.1/private trixie-staging/main armhf python3-h5py all 3.10.0-1 [14.4 kB]
Get:194 http://172.17.4.1/private trixie-staging/main armhf python3-idna all 3.6-2 [37.0 kB]
Get:195 http://172.17.4.1/private trixie-staging/main armhf python3-imagesize all 1.4.1-1 [6688 B]
Get:196 http://172.17.4.1/private trixie-staging/main armhf python3-iniconfig all 1.1.1-2 [6396 B]
Get:197 http://172.17.4.1/private trixie-staging/main armhf python3-markupsafe armhf 2.1.5-1 [13.8 kB]
Get:198 http://172.17.4.1/private trixie-staging/main armhf python3-jinja2 all 3.1.2-1 [119 kB]
Get:199 http://172.17.4.1/private trixie-staging/main armhf python3-kiwisolver armhf 1.4.4-1 [52.3 kB]
Get:200 http://172.17.4.1/private trixie-staging/main armhf python3-pil armhf 10.2.0-1 [455 kB]
Ign:200 http://172.17.4.1/private trixie-staging/main armhf python3-pil armhf 10.2.0-1
Get:201 http://172.17.4.1/private trixie-staging/main armhf python3-tk armhf 3.11.5-1 [95.9 kB]
Get:202 http://172.17.4.1/private trixie-staging/main armhf python3-pil.imagetk armhf 10.2.0-1 [77.0 kB]
Get:203 http://172.17.4.1/private trixie-staging/main armhf python3-pyparsing all 3.1.1-1 [145 kB]
Get:204 http://172.17.4.1/private trixie-staging/main armhf python3-packaging all 23.2-1 [44.8 kB]
Get:205 http://172.17.4.1/private trixie-staging/main armhf python3-matplotlib armhf 3.6.3-1 [7453 kB]
Get:206 http://172.17.4.1/private trixie-staging/main armhf sphinx-common all 7.2.6-4 [702 kB]
Get:207 http://172.17.4.1/private trixie-staging/main armhf python3-pygments all 2.17.2+dfsg-1 [818 kB]
Get:208 http://172.17.4.1/private trixie-staging/main armhf python3-urllib3 all 1.26.18-2 [116 kB]
Get:209 http://172.17.4.1/private trixie-staging/main armhf python3-requests all 2.31.0+dfsg-1 [68.6 kB]
Get:210 http://172.17.4.1/private trixie-staging/main armhf python3-snowballstemmer all 2.2.0-4 [58.0 kB]
Get:211 http://172.17.4.1/private trixie-staging/main armhf python3-sphinx all 7.2.6-4 [552 kB]
Get:212 http://172.17.4.1/private trixie-staging/main armhf python3-tabulate all 0.8.10-1 [38.8 kB]
Get:213 http://172.17.4.1/private trixie-staging/main armhf python3-numpydoc all 1.6.0-1 [49.6 kB]
Get:214 http://172.17.4.1/private trixie-staging/main armhf python3-pandas-lib armhf 1.5.3+dfsg-10 [3005 kB]
Get:215 http://172.17.4.1/private trixie-staging/main armhf python3-pandas all 1.5.3+dfsg-12 [2887 kB]
Get:216 http://172.17.4.1/private trixie-staging/main armhf python3-pluggy all 1.4.0-1 [26.2 kB]
Get:217 http://172.17.4.1/private trixie-staging/main armhf python3-pytest all 7.4.4-3 [239 kB]
Get:218 http://172.17.4.1/private trixie-staging/main armhf python3-pytest-cov all 4.1.0-1 [26.7 kB]
Get:200 http://172.17.4.1/private trixie-staging/main armhf python3-pil armhf 10.2.0-1 [455 kB]
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No schema files found: doing nothing.
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invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of restart.
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
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146 added, 0 removed; done.
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Setting up libfontconfig1:armhf (2.14.2-6) ...
Setting up libpython3.12:armhf (3.12.2-1) ...
Setting up libpython3-stdlib:armhf (3.11.6-1) ...
Setting up liblbfgsb0:armhf (3.0+dfsg.4-1) ...
Setting up python3.11 (3.11.8-1) ...
Setting up libibverbs1:armhf (48.0-1.1) ...
Setting up libpython3.11:armhf (3.11.8-1) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up openssh-client (1:9.6p1-3) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up python3 (3.11.6-1) ...
Setting up libpython3.12-dev:armhf (3.12.2-1) ...
Setting up man-db (2.12.0-3) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-markupsafe (2.1.5-1) ...
Setting up python3-tz (2024.1-1) ...
Setting up libxnvctrl0:armhf (525.147.05-1) ...
Setting up python3-six (1.16.0-4) ...
Setting up python3-roman (3.3-3) ...
Setting up python3-decorator (5.1.1-5) ...
Setting up python3-jinja2 (3.1.2-1) ...
Setting up python3-packaging (23.2-1) ...
Setting up python3-pyparsing (3.1.1-1) ...
Setting up python3-certifi (2023.11.17-1) ...
Setting up python3-snowballstemmer (2.2.0-4) ...
Setting up libpython3.11-dev:armhf (3.11.8-1) ...
Setting up python3-brotli (1.1.0-2) ...
Setting up libraqm0:armhf (0.10.1-1) ...
Setting up sphinx-common (7.2.6-4) ...
Setting up python3-cycler (0.11.0-1) ...
Setting up python3-kiwisolver (1.4.4-1) ...
Setting up python3-idna (3.6-2) ...
Setting up python3.12-dev (3.12.2-1) ...
Setting up cython3 (3.0.8-1) ...
Setting up python3-urllib3 (1.26.18-2) ...
Setting up python3-pluggy (1.4.0-1) ...
Setting up python3-lxml:armhf (5.1.0-1) ...
Setting up python3-dateutil (2.8.2-3) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up python3-mpmath (1.2.1-2) ...
Setting up python3-lib2to3 (3.11.5-1) ...
Setting up python3-appdirs (1.4.4-4) ...
Setting up python3-imagesize (1.4.1-1) ...
Setting up python3-pkg-resources (68.1.2-2) ...
Setting up python3-distutils (3.11.5-1) ...
python3.12: can't get files for byte-compilation
Setting up python3-iniconfig (1.1.1-2) ...
Setting up python3-sympy (1.12-7) ...
Setting up librdmacm1:armhf (48.0-1.1) ...
Setting up python3-attr (23.2.0-1) ...
Setting up libxft2:armhf (2.3.6-1) ...
Setting up libpython3-dev:armhf (3.11.6-1) ...
Setting up python3-setuptools (68.1.2-2) ...
Setting up python3-babel (2.10.3-3) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python3-colorama (0.4.6-4) ...
Setting up python3-lz4 (4.0.2+dfsg-1+b1) ...
Setting up python3.11-dev (3.11.8-1) ...
Setting up python3-charset-normalizer (3.3.2-1) ...
Setting up python3-pytest (7.4.4-3) ...
Setting up python3-alabaster (0.7.12-1) ...
Setting up libtk8.6:armhf (8.6.13-2) ...
Setting up python3-tabulate (0.8.10-1) ...
Setting up python3-all (3.11.6-1) ...
Setting up python3-coverage (7.2.7+dfsg1-1) ...
Setting up debhelper (13.13) ...
Setting up python3-pytest-cov (4.1.0-1) ...
Setting up python3-click (8.1.6-1) ...
Setting up libhwloc-plugins:armhf (2.10.0-1) ...
Setting up python3-fs (2.4.16-3) ...
Setting up python3-pil:armhf (10.2.0-1) ...
Setting up python3-pygments (2.17.2+dfsg-1) ...
Setting up python3-chardet (5.2.0+dfsg-1) ...
Setting up libpython3-all-dev:armhf (3.11.6-1) ...
Setting up python3-dev (3.11.6-1) ...
Setting up python3-requests (2.31.0+dfsg-1) ...
Setting up python3-numpy (1:1.24.2-2) ...
Setting up python3-contourpy (1.0.7-1) ...
Setting up dh-python (6.20231223) ...
Setting up python3-all-dev (3.11.6-1) ...
Setting up libfabric1:armhf (1.17.0-3) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ...
Setting up python3-scipy (1.10.1-5+rpi1) ...
Setting up libpmix2:armhf (5.0.1-4) ...
Setting up libopenmpi3:armhf (4.1.6-5+rpi1) ...
Setting up blt (2.5.3+dfsg-7) ...
Setting up python3-pandas-lib:armhf (1.5.3+dfsg-10) ...
Setting up python3-tk:armhf (3.11.5-1) ...
Setting up python3-pandas (1.5.3+dfsg-12) ...
Setting up python3-pil.imagetk:armhf (10.2.0-1) ...
Setting up openmpi-bin (4.1.6-5+rpi1) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up libhdf5-openmpi-103-1:armhf (1.10.10+repack-3) ...
Setting up mpi-default-bin (1.15) ...
Setting up python3-mpi4py (3.1.5-4) ...
Setting up libhdf5-openmpi-hl-100:armhf (1.10.10+repack-3) ...
Setting up python3-h5py-mpi (3.9.0-5) ...
Setting up python3-h5py (3.10.0-1) ...
Setting up python3-fonttools (4.46.0-1) ...
Setting up python3-ufolib2 (0.16.0+dfsg1-1) ...
Setting up python3-matplotlib (3.6.3-1) ...
Processing triggers for libc-bin (2.37-15~deb13u1+rpi1) ...
Processing triggers for sgml-base (1.31) ...
Setting up docutils-common (0.20.1+dfsg-3) ...
Processing triggers for sgml-base (1.31) ...
Setting up python3-docutils (0.20.1+dfsg-3) ...
Setting up python3-sphinx (7.2.6-4) ...
Setting up python3-numpydoc (1.6.0-1) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20240203) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 6.1.47-v8+ #1 SMP PREEMPT Fri Sep  1 07:05:33 BST 2023 arm64 (aarch64)
Toolchain package versions: binutils_2.41-6+rpi1 dpkg-dev_1.22.4+rpi1 g++-12_12.3.0-14+rpi1 g++-13_13.2.0-9+rpi1 gcc-12_12.3.0-14+rpi1 gcc-13_13.2.0-9+rpi1 libc6-dev_2.37-15~deb13u1+rpi1 libstdc++-12-dev_12.3.0-14+rpi1 libstdc++-13-dev_13.2.0-9+rpi1 libstdc++6_13.2.0-9+rpi1 linux-libc-dev_6.5.6-1+rpi1+b1
Package versions: adduser_3.137 apt_2.7.11 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13+rpi1 base-passwd_3.6.3 bash_5.2.21-2 bash-completion_1:2.11-8 binutils_2.41-6+rpi1 binutils-arm-linux-gnueabihf_2.41-6+rpi1 binutils-common_2.41-6+rpi1 blt_2.5.3+dfsg-7 bsdextrautils_2.39.3-6 bsdutils_1:2.39.3-6 build-essential_12.10 bzip2_1.0.8-5+b2 ca-certificates_20240203 coreutils_9.4-3 cpp_4:13.2.0-1+rpi1 cpp-12_12.3.0-14+rpi1 cpp-13_13.2.0-9+rpi1 cython3_3.0.8-1 dash_0.5.12-6 debconf_1.5.86 debhelper_13.13 debianutils_5.16 dh-autoreconf_20 dh-python_6.20231223 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dirmngr_2.2.40-1.1 docutils-common_0.20.1+dfsg-3 dpkg_1.22.4+rpi1 dpkg-dev_1.22.4+rpi1 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.33-1 file_1:5.45-2 findutils_4.9.0-5 fontconfig-config_2.14.2-6 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lyx_2.4.0~RC3-1 g++_4:13.2.0-1+rpi1 g++-12_12.3.0-14+rpi1 g++-13_13.2.0-9+rpi1 gcc_4:13.2.0-1+rpi1 gcc-10-base_10.4.0-7+rpi1 gcc-12_12.3.0-14+rpi1 gcc-12-base_12.3.0-14+rpi1 gcc-13_13.2.0-9+rpi1 gcc-13-base_13.2.0-9+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-14 gettext-base_0.21-14 gnupg_2.2.40-1.1 gnupg-l10n_2.2.40-1.1 gnupg-utils_2.2.40-1.1 gpg_2.2.40-1.1 gpg-agent_2.2.40-1.1 gpg-wks-client_2.2.40-1.1 gpg-wks-server_2.2.40-1.1 gpgconf_2.2.40-1.1 gpgsm_2.2.40-1.1 gpgv_2.2.40-1.1 grep_3.11-4 groff-base_1.23.0-3 gzip_1.12-1 help2man_1.49.3 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-1 libaec0_1.1.2-1 libapt-pkg6.0_2.7.11 libarchive-zip-perl_1.68-1 libasan8_13.2.0-9+rpi1 libassuan0_2.5.6-1 libatomic1_13.2.0-9+rpi1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2 libaudit1_1:3.1.2-2 libbinutils_2.41-6+rpi1 libblas3_3.12.0-3 libblkid1_2.39.3-6 libbrotli1_1.1.0-2 libbsd0_0.11.8-1 libbz2-1.0_1.0.8-5+b2 libc-bin_2.37-15~deb13u1+rpi1 libc-dev-bin_2.37-15~deb13u1+rpi1 libc6_2.37-15~deb13u1+rpi1 libc6-dev_2.37-15~deb13u1+rpi1 libcap-ng0_0.8.4-2 libcap2_1:2.66-5 libcbor0.10_0.10.2-1.1 libcc1-0_13.2.0-9+rpi1 libcom-err2_1.47.0-2 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.41-6+rpi1 libctf0_2.41-6+rpi1 libcurl4_8.5.0-2+rpi1 libdb5.3_5.3.28+dfsg2-4 libdebconfclient0_0.271 libdebhelper-perl_13.13 libdeflate0_1.19-1 libdpkg-perl_1.22.4+rpi1 libedit2_3.1-20230828-1 libelf1_0.188-2.1+rpi1 libevent-core-2.1-7_2.1.12-stable-8 libevent-pthreads-2.1-7_2.1.12-stable-8 libexpat1_2.5.0-2 libexpat1-dev_2.5.0-2 libext2fs2_1.47.0-2 libfabric1_1.17.0-3 libfakeroot_1.33-1 libffi8_3.4.4-2 libfido2-1_1.14.0-1 libfile-find-rule-perl_0.34-3 libfile-stripnondeterminism-perl_1.13.1-1 libfontconfig1_2.14.2-6 libfreetype6_2.13.2+dfsg-1 libfribidi0_1.0.13-3 libgcc-12-dev_12.3.0-14+rpi1 libgcc-13-dev_13.2.0-9+rpi1 libgcc-s1_13.2.0-9+rpi1 libgcrypt20_1.10.3-2 libgdbm-compat4_1.23-5 libgdbm6_1.23-5 libgfortran5_13.2.0-9+rpi1 libglib2.0-0_2.78.4-1 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libldap-2.5-0_2.5.13+dfsg-5+rpi1+b1 liblerc4_4.0.0+ds-4 liblocale-gettext-perl_1.07-6+b1 liblz4-1_1.9.4-1+rpi1+b1 liblzf1_3.6-4 liblzma5_5.4.5-0.3 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.1.0-2 libmount1_2.39.3-6 libmpc3_1.3.1-1 libmpfr6_4.2.1-1 libmunge2_0.5.15-3 libncursesw6_6.4+20240113-1 libnettle8_3.9.1-2 libnghttp2-14_1.59.0-1 libnl-3-200_3.7.0-0.3 libnl-route-3-200_3.7.0-0.3 libnpth0_1.6-3 libnsl-dev_1.3.0-3 libnsl2_1.3.0-3 libnumber-compare-perl_0.03-3 libopenjp2-7_2.5.0-2+b2 libopenmpi3_4.1.6-5+rpi1 libp11-kit0_0.25.3-4 libpam-modules_1.5.2-9.1 libpam-modules-bin_1.5.2-9.1 libpam-runtime_1.5.2-9.1 libpam0g_1.5.2-9.1 libpciaccess0_0.17-3 libpcre2-8-0_10.42-4 libperl5.38_5.38.2-3 libpipeline1_1.5.7-1 libpmix2_5.0.1-4 libpng16-16_1.6.42-1 libpsl5_0.21.2-1+b1 libpython3-all-dev_3.11.6-1 libpython3-dev_3.11.6-1 libpython3-stdlib_3.11.6-1 libpython3.11_3.11.8-1 libpython3.11-dev_3.11.8-1 libpython3.11-minimal_3.11.8-1 libpython3.11-stdlib_3.11.8-1 libpython3.12_3.12.2-1 libpython3.12-dev_3.12.2-1 libpython3.12-minimal_3.12.2-1 libpython3.12-stdlib_3.12.2-1 libqhull-r8.0_2020.2-6 libraqm0_0.10.1-1 librdmacm1_48.0-1.1 libreadline8_8.2-3 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg1-4 libsasl2-modules-db_2.1.28+dfsg1-4 libseccomp2_2.5.5-1+rpi1 libselinux1_3.5-2 libsemanage-common_3.5-1 libsemanage2_3.5-1 libsepol2_3.5-2 libsframe1_2.41-6+rpi1 libsharpyuv0_1.3.2-0.3 libsmartcols1_2.39.3-6 libsqlite3-0_3.45.1-1 libss2_1.47.0-2 libssh2-1_1.11.0-4 libssl3_3.1.5-1 libstdc++-12-dev_12.3.0-14+rpi1 libstdc++-13-dev_13.2.0-9+rpi1 libstdc++6_13.2.0-9+rpi1 libsub-override-perl_0.10-1 libsystemd0_255.3-1+rpi1 libsz2_1.1.2-1 libtasn1-6_4.19.0-3 libtcl8.6_8.6.13+dfsg-2+b1 libtext-charwidth-perl_0.04-11+b1 libtext-glob-perl_0.11-3 libtext-iconv-perl_1.7-8+b1 libtiff6_4.5.1+git230720-4 libtinfo6_6.4+20240113-1 libtirpc-common_1.3.4+ds-1 libtirpc-dev_1.3.4+ds-1 libtirpc3_1.3.4+ds-1 libtk8.6_8.6.13-2 libtool_2.4.7-7 libubsan1_13.2.0-9+rpi1 libuchardet0_0.0.8-1 libudev1_255.3-1+rpi1 libunistring5_1.1-2 libuuid1_2.39.3-6 libwebp7_1.3.2-0.3 libwebpdemux2_1.3.2-0.3 libwebpmux3_1.3.2-0.3 libx11-6_2:1.8.7-1 libx11-data_2:1.8.7-1 libxau6_1:1.0.9-1 libxcb1_1.15-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxft2_2.3.6-1 libxml2_2.9.14+dfsg-1.3 libxnvctrl0_525.147.05-1 libxrender1_1:0.9.10-1.1 libxslt1.1_1.1.35-1 libxss1_1:1.2.3-1 libxxhash0_0.8.2-2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.5.6-1+rpi1+b1 login_1:4.13+dfsg1-3 logsave_1.47.0-2 lsb-base_11.6+rpi1 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.0-3 mawk_1.3.4.20240123-1 media-types_10.1.0 mount_2.39.3-6 mpi-default-bin_1.15 nano_7.2-2 ncurses-base_6.4+20240113-1 ncurses-bin_6.4+20240113-1 netbase_6.4 ocl-icd-libopencl1_2.3.2-1 openmpi-bin_4.1.6-5+rpi1 openmpi-common_4.1.6-5+rpi1 openssh-client_1:9.6p1-3 openssl_3.1.5-1 passwd_1:4.13+dfsg1-3 patch_2.7.6-7 perl_5.38.2-3 perl-base_5.38.2-3 perl-modules-5.38_5.38.2-3 pinentry-curses_1.2.1-3 po-debconf_1.0.21+nmu1 python-babel-localedata_2.10.3-3 python-matplotlib-data_3.6.3-1 python3_3.11.6-1 python3-alabaster_0.7.12-1 python3-all_3.11.6-1 python3-all-dev_3.11.6-1 python3-appdirs_1.4.4-4 python3-attr_23.2.0-1 python3-babel_2.10.3-3 python3-brotli_1.1.0-2 python3-certifi_2023.11.17-1 python3-chardet_5.2.0+dfsg-1 python3-charset-normalizer_3.3.2-1 python3-click_8.1.6-1 python3-colorama_0.4.6-4 python3-contourpy_1.0.7-1 python3-coverage_7.2.7+dfsg1-1 python3-cycler_0.11.0-1 python3-dateutil_2.8.2-3 python3-decorator_5.1.1-5 python3-dev_3.11.6-1 python3-distutils_3.11.5-1 python3-docutils_0.20.1+dfsg-3 python3-fonttools_4.46.0-1 python3-fs_2.4.16-3 python3-h5py_3.10.0-1 python3-h5py-mpi_3.9.0-5 python3-idna_3.6-2 python3-imagesize_1.4.1-1 python3-iniconfig_1.1.1-2 python3-jinja2_3.1.2-1 python3-kiwisolver_1.4.4-1 python3-lib2to3_3.11.5-1 python3-lxml_5.1.0-1 python3-lz4_4.0.2+dfsg-1+b1 python3-markupsafe_2.1.5-1 python3-matplotlib_3.6.3-1 python3-minimal_3.11.6-1 python3-mpi4py_3.1.5-4 python3-mpmath_1.2.1-2 python3-numpy_1:1.24.2-2 python3-numpydoc_1.6.0-1 python3-packaging_23.2-1 python3-pandas_1.5.3+dfsg-12 python3-pandas-lib_1.5.3+dfsg-10 python3-pil_10.2.0-1 python3-pil.imagetk_10.2.0-1 python3-pkg-resources_68.1.2-2 python3-pluggy_1.4.0-1 python3-pygments_2.17.2+dfsg-1 python3-pyparsing_3.1.1-1 python3-pytest_7.4.4-3 python3-pytest-cov_4.1.0-1 python3-requests_2.31.0+dfsg-1 python3-roman_3.3-3 python3-scipy_1.10.1-5+rpi1 python3-setuptools_68.1.2-2 python3-six_1.16.0-4 python3-snowballstemmer_2.2.0-4 python3-sphinx_7.2.6-4 python3-sympy_1.12-7 python3-tabulate_0.8.10-1 python3-tk_3.11.5-1 python3-tz_2024.1-1 python3-ufolib2_0.16.0+dfsg1-1 python3-urllib3_1.26.18-2 python3.11_3.11.8-1 python3.11-dev_3.11.8-1 python3.11-minimal_3.11.8-1 python3.12_3.12.2-1 python3.12-dev_3.12.2-1 python3.12-minimal_3.12.2-1 raspbian-archive-keyring_20120528.2 readline-common_8.2-3 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.22 sgml-base_1.31 sphinx-common_7.2.6-4 sysvinit-utils_3.08-6 tar_1.35+dfsg-3 tk8.6-blt2.5_2.5.3+dfsg-7 tzdata_2024a-1 unicode-data_15.1.0-1 usr-is-merged_39 usrmerge_39 util-linux_2.39.3-6 x11-common_1:7.7+23 xml-core_0.19 xz-utils_5.4.5-0.3 zlib1g_1:1.3.dfsg-3 zlib1g-dev_1:1.3.dfsg-3

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 3.0 (quilt)
Source: python-biom-format
Binary: python3-biom-format, python-biom-format-doc
Architecture: any all
Version: 2.1.15.2-3
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>, Étienne Mollier <emollier@debian.org>
Homepage: https://biom-format.org/
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/python-biom-format
Vcs-Git: https://salsa.debian.org/med-team/python-biom-format.git
Testsuite: autopkgtest, autopkgtest-pkg-python
Build-Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-h5py, python3-numpy, python3-numpydoc, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest <!nocheck>, python3-pytest-cov <!nocheck>
Package-List:
 python-biom-format-doc deb doc optional arch=all
 python3-biom-format deb python optional arch=any
Checksums-Sha1:
 39170d70ddc09f033f08829a084630e979e75ac6 11870335 python-biom-format_2.1.15.2.orig.tar.gz
 c78277bb0f31362538bc71117df12d4246adbde0 11464 python-biom-format_2.1.15.2-3.debian.tar.xz
Checksums-Sha256:
 b4b710d70ab3365966d7fe5104eea73c3c927fe46de2be924aa82531432761e7 11870335 python-biom-format_2.1.15.2.orig.tar.gz
 62b746fe97775a55d91caadcf20d4c60c304e816e843bda75c025caf923eeaab 11464 python-biom-format_2.1.15.2-3.debian.tar.xz
Files:
 4bb9c5c75c32075a3ba83422ebb8f849 11870335 python-biom-format_2.1.15.2.orig.tar.gz
 da2861837468170dc4ce26fe771563d7 11464 python-biom-format_2.1.15.2-3.debian.tar.xz

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gpgv: Signature made Sun Feb  4 19:23:04 2024 UTC
gpgv:                using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./python-biom-format_2.1.15.2-3.dsc: no acceptable signature found
dpkg-source: info: extracting python-biom-format in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking python-biom-format_2.1.15.2.orig.tar.gz
dpkg-source: info: unpacking python-biom-format_2.1.15.2-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying ignore_local_dist-packages.patch
dpkg-source: info: applying no-web-adds.patch
dpkg-source: info: applying fix_future_import.patch
dpkg-source: info: applying sphinx_1.6.patch
dpkg-source: info: applying posix_shell.patch
dpkg-source: info: applying adjust-pd-df-interaction-with-greater-than.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=trixie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=trixie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=124
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=trixie-staging-armhf-sbuild-9a3cf3d9-6054-469b-bcc3-3a5e876139d9
SCHROOT_UID=114
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage --sanitize-env -us -uc -mRaspbian pi5 test autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package python-biom-format
dpkg-buildpackage: info: source version 2.1.15.2-3
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --with bash-completion,sphinxdoc --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
	pybuild --clean -i python{version} -p "3.12 3.11"
I: pybuild base:305: python3.12 setup.py clean 
Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 23, in <module>
    from . import multiarray
  File "/usr/lib/python3/dist-packages/numpy/core/multiarray.py", line 10, in <module>
    from . import overrides
  File "/usr/lib/python3/dist-packages/numpy/core/overrides.py", line 6, in <module>
    from numpy.core._multiarray_umath import (
ModuleNotFoundError: No module named 'numpy.core._multiarray_umath'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/<<PKGBUILDDIR>>/setup.py", line 16, in <module>
    import numpy as np
  File "/usr/lib/python3/dist-packages/numpy/__init__.py", line 141, in <module>
    from . import core
  File "/usr/lib/python3/dist-packages/numpy/core/__init__.py", line 49, in <module>
    raise ImportError(msg)
ImportError: 

IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!

Importing the numpy C-extensions failed. This error can happen for
many reasons, often due to issues with your setup or how NumPy was
installed.

We have compiled some common reasons and troubleshooting tips at:

    https://numpy.org/devdocs/user/troubleshooting-importerror.html

Please note and check the following:

  * The Python version is: Python3.12 from "/usr/bin/python3.12"
  * The NumPy version is: "1.24.2"

and make sure that they are the versions you expect.
Please carefully study the documentation linked above for further help.

Original error was: No module named 'numpy.core._multiarray_umath'

E: pybuild pybuild:391: clean: plugin distutils failed with: exit code=1: python3.12 setup.py clean 
dh_auto_clean: error: pybuild --clean -i python{version} -p "3.12 3.11" returned exit code 13
make: *** [debian/rules:19: clean] Error 25
dpkg-buildpackage: error: debian/rules clean subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2024-02-21T11:24:22Z

Finished
--------


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build Type: any
Build-Space: 52140
Build-Time: 1
Distribution: trixie-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 207
Job: python-biom-format_2.1.15.2-3
Machine Architecture: arm64
Package: python-biom-format
Package-Time: 218
Source-Version: 2.1.15.2-3
Space: 52140
Status: attempted
Version: 2.1.15.2-3
--------------------------------------------------------------------------------
Finished at 2024-02-21T11:24:22Z
Build needed 00:03:38, 52140k disk space
Raspbian Package Auto-Building

Build log for python-biom-format (2.1.15.2-3) on armhf
