python-biom-format →
2.1.15.2-1 →
armhf → 2023-12-03 06:25:39
sbuild (Debian sbuild) 0.85.0 (04 January 2023) on test2023
+==============================================================================+
| python-biom-format 2.1.15.2-1 (armhf) Sun, 03 Dec 2023 06:22:03 +0000 |
+==============================================================================+
Package: python-biom-format
Version: 2.1.15.2-1
Source Version: 2.1.15.2-1
Distribution: trixie-staging
Machine Architecture: arm64
Host Architecture: armhf
Build Architecture: armhf
Build Type: any
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/trixie-staging-armhf-sbuild-5fe5c187-a4b9-4d15-93b2-dd42f6281474' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/python-biom-format-IFCvhm/resolver-gb3SxC' with '<<RESOLVERDIR>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private trixie-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private trixie-staging/main Sources [14.3 MB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf Packages [15.0 MB]
Fetched 29.3 MB in 5s (5561 kB/s)
Reading package lists...
W: http://172.17.4.1/private/dists/trixie-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'python-biom-format' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-biom-format.git
Please use:
git clone https://salsa.debian.org/med-team/python-biom-format.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 11.9 MB of source archives.
Get:1 http://172.17.4.1/private trixie-staging/main python-biom-format 2.1.15.2-1 (dsc) [2519 B]
Get:2 http://172.17.4.1/private trixie-staging/main python-biom-format 2.1.15.2-1 (tar) [11.9 MB]
Get:3 http://172.17.4.1/private trixie-staging/main python-biom-format 2.1.15.2-1 (diff) [10.6 kB]
Fetched 11.9 MB in 1s (8408 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/python-biom-format-IFCvhm/python-biom-format-2.1.15.2' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-biom-format-IFCvhm' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-numpy, python3-numpydoc, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-numpy, python3-numpydoc, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [904 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [914 B]
Fetched 2427 B in 0s (0 B/s)
Reading package lists...
Reading package lists...
Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bash-completion blt bsdextrautils
bsdutils ca-certificates cython3 debhelper dh-autoreconf dh-python
dh-strip-nondeterminism docutils-common dpkg-dev dwz file fontconfig-config
fonts-dejavu-core fonts-dejavu-mono fonts-lyx gettext gettext-base
groff-base help2man intltool-debian libaec0 libarchive-zip-perl libblas3
libblkid1 libbrotli1 libbsd0 libcurl4 libdebhelper-perl libdeflate0
libdpkg-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhdf5-103-1
libhdf5-hl-100 libicu72 libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery
libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata
libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-jquery-ui
libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 liblbfgsb0
liblcms2-2 liblerc4 liblzf1 libmagic-mgc libmagic1 libmount1 libnghttp2-14
libopenjp2-7 libpipeline1 libpng16-16 libpsl5 libpython3-all-dev
libpython3-dev libpython3-stdlib libpython3.11 libpython3.11-dev
libpython3.11-minimal libpython3.11-stdlib libqhull-r8.0 libraqm0 librtmp1
libsharpyuv0 libsmartcols1 libssh2-1 libsub-override-perl libsz2 libtcl8.6
libtiff6 libtk8.6 libtool libuchardet0 libuuid1 libwebp7 libwebpdemux2
libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2
libxml2 libxrender1 libxslt1.1 libxss1 m4 man-db media-types mount openssl
po-debconf python-babel-localedata python-matplotlib-data python3
python3-alabaster python3-all python3-all-dev python3-appdirs python3-attr
python3-babel python3-brotli python3-certifi python3-chardet
python3-charset-normalizer python3-click python3-colorama python3-contourpy
python3-coverage python3-cycler python3-dateutil python3-decorator
python3-dev python3-distutils python3-docutils python3-fonttools python3-fs
python3-future python3-h5py python3-h5py-serial python3-idna
python3-imagesize python3-iniconfig python3-jinja2 python3-kiwisolver
python3-lib2to3 python3-lxml python3-lz4 python3-markupsafe
python3-matplotlib python3-minimal python3-mpmath python3-numpy
python3-numpydoc python3-packaging python3-pandas python3-pandas-lib
python3-pil python3-pil.imagetk python3-pkg-resources python3-pluggy
python3-pygments python3-pyparsing python3-pytest python3-pytest-cov
python3-requests python3-roman python3-scipy python3-setuptools python3-six
python3-snowballstemmer python3-sphinx python3-sympy python3-tk python3-tz
python3-ufolib2 python3-urllib3 python3.11 python3.11-dev python3.11-minimal
sensible-utils sgml-base sphinx-common tk8.6-blt2.5 unicode-data util-linux
x11-common xml-core zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc blt-demo cython-doc dh-make flit
python3-build python3-installer python3-wheel debian-keyring gettext-doc
libasprintf-dev libgettextpo-dev groff git bzr low-memory-monitor
libjs-jquery-ui-docs liblcms2-utils cryptsetup-bin tcl8.6 tk8.6 libtool-doc
gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
nfs-common libmail-box-perl python3-doc python3-venv python-attr-doc
python-charset-normalizer-doc python-coverage-doc python-cycler-doc
docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french
texlive-latex-base texlive-latex-recommended python-future-doc
python-h5py-doc python-jinja2-doc python-lxml-doc cm-super-minimal dvipng
ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3
librsvg2-common python3-cairocffi python3-gi python3-gi-cairo
python3-gobject python3-pyqt5 python3-sip python3-tornado
texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2
gfortran python-pandas-doc python3-statsmodels python-pil-doc
python-pygments-doc ttf-bitstream-vera python-pyparsing-doc
python3-cryptography python3-openssl python3-socks python-requests-doc
python-scipy-doc python-setuptools-doc python3-stemmer fonts-freefont-otf
imagemagick-6.q16 latexmk libjs-mathjax python3-sphinx-rtd-theme sphinx-doc
tex-gyre texlive-fonts-recommended texlive-plain-generic texlive-fonts-extra
python-sympy-doc tix python3-tk-dbg python3.11-venv python3.11-doc
binfmt-support sgml-base-doc dosfstools kbd util-linux-extra
util-linux-locales
Recommended packages:
libalgorithm-merge-perl curl | wget | lynx libfile-fcntllock-perl
libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs
javascript-common libjson-xs-perl publicsuffix libltdl-dev uuid-runtime
libmail-sendmail-perl libpaper-utils python3-bs4 python3-html5lib
python3-bottleneck python3-numexpr python3-odf python3-openpyxl
python3-tables python3-olefile isympy-common
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bash-completion blt bsdextrautils
ca-certificates cython3 debhelper dh-autoreconf dh-python
dh-strip-nondeterminism docutils-common dwz file fontconfig-config
fonts-dejavu-core fonts-dejavu-mono fonts-lyx gettext gettext-base
groff-base help2man intltool-debian libaec0 libarchive-zip-perl libblas3
libbrotli1 libbsd0 libcurl4 libdebhelper-perl libdeflate0 libelf1 libexpat1
libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6
libfribidi0 libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b
libhdf5-103-1 libhdf5-hl-100 libicu72 libimagequant0 libjbig0
libjpeg62-turbo libjs-jquery libjs-jquery-hotkeys libjs-jquery-isonscreen
libjs-jquery-metadata libjs-jquery-tablesorter
libjs-jquery-throttle-debounce libjs-jquery-ui libjs-sphinxdoc
libjs-underscore libjson-perl liblapack3 liblbfgsb0 liblcms2-2 liblerc4
liblzf1 libmagic-mgc libmagic1 libnghttp2-14 libopenjp2-7 libpipeline1
libpng16-16 libpsl5 libpython3-all-dev libpython3-dev libpython3-stdlib
libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib
libqhull-r8.0 libraqm0 librtmp1 libsharpyuv0 libssh2-1 libsub-override-perl
libsz2 libtcl8.6 libtiff6 libtk8.6 libtool libuchardet0 libwebp7
libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6
libxext6 libxft2 libxml2 libxrender1 libxslt1.1 libxss1 m4 man-db
media-types openssl po-debconf python-babel-localedata
python-matplotlib-data python3 python3-alabaster python3-all python3-all-dev
python3-appdirs python3-attr python3-babel python3-brotli python3-certifi
python3-chardet python3-charset-normalizer python3-click python3-colorama
python3-contourpy python3-coverage python3-cycler python3-dateutil
python3-decorator python3-dev python3-distutils python3-docutils
python3-fonttools python3-fs python3-future python3-h5py python3-h5py-serial
python3-idna python3-imagesize python3-iniconfig python3-jinja2
python3-kiwisolver python3-lib2to3 python3-lxml python3-lz4
python3-markupsafe python3-matplotlib python3-minimal python3-mpmath
python3-numpy python3-numpydoc python3-packaging python3-pandas
python3-pandas-lib python3-pil python3-pil.imagetk python3-pkg-resources
python3-pluggy python3-pygments python3-pyparsing python3-pytest
python3-pytest-cov python3-requests python3-roman python3-scipy
python3-setuptools python3-six python3-snowballstemmer python3-sphinx
python3-sympy python3-tk python3-tz python3-ufolib2 python3-urllib3
python3.11 python3.11-dev python3.11-minimal sbuild-build-depends-main-dummy
sensible-utils sgml-base sphinx-common tk8.6-blt2.5 unicode-data x11-common
xml-core zlib1g-dev
The following packages will be upgraded:
bsdutils dpkg-dev libblkid1 libdpkg-perl libmount1 libsmartcols1 libuuid1
mount util-linux
9 upgraded, 187 newly installed, 0 to remove and 40 not upgraded.
1 not fully installed or removed.
Need to get 115 MB/117 MB of archives.
After this operation, 479 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [980 B]
Get:2 http://172.17.4.1/private trixie-staging/main armhf mount armhf 2.39.2-6 [134 kB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf bsdutils armhf 1:2.39.2-6 [86.5 kB]
Get:4 http://172.17.4.1/private trixie-staging/main armhf util-linux armhf 2.39.2-6 [1110 kB]
Get:5 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:6 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB]
Get:7 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-minimal armhf 3.11.6-3 [800 kB]
Get:8 http://172.17.4.1/private trixie-staging/main armhf libexpat1 armhf 2.5.0-2 [76.8 kB]
Get:9 http://172.17.4.1/private trixie-staging/main armhf python3.11-minimal armhf 3.11.6-3 [1674 kB]
Get:10 http://172.17.4.1/private trixie-staging/main armhf python3-minimal armhf 3.11.4-5 [26.2 kB]
Get:11 http://172.17.4.1/private trixie-staging/main armhf media-types all 10.1.0 [26.9 kB]
Get:12 http://172.17.4.1/private trixie-staging/main armhf libuuid1 armhf 2.39.2-6 [28.1 kB]
Get:13 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-stdlib armhf 3.11.6-3 [1679 kB]
Get:14 http://172.17.4.1/private trixie-staging/main armhf python3.11 armhf 3.11.6-3 [586 kB]
Get:15 http://172.17.4.1/private trixie-staging/main armhf libpython3-stdlib armhf 3.11.4-5 [9200 B]
Get:16 http://172.17.4.1/private trixie-staging/main armhf python3 armhf 3.11.4-5 [26.2 kB]
Get:17 http://172.17.4.1/private trixie-staging/main armhf sgml-base all 1.31 [15.4 kB]
Get:18 http://172.17.4.1/private trixie-staging/main armhf libblkid1 armhf 2.39.2-6 [145 kB]
Get:19 http://172.17.4.1/private trixie-staging/main armhf libmount1 armhf 2.39.2-6 [167 kB]
Get:20 http://172.17.4.1/private trixie-staging/main armhf libsmartcols1 armhf 2.39.2-6 [102 kB]
Get:21 http://172.17.4.1/private trixie-staging/main armhf libuchardet0 armhf 0.0.8-1 [65.5 kB]
Get:22 http://172.17.4.1/private trixie-staging/main armhf groff-base armhf 1.23.0-3 [1033 kB]
Get:23 http://172.17.4.1/private trixie-staging/main armhf bsdextrautils armhf 2.39.2-6 [81.2 kB]
Get:24 http://172.17.4.1/private trixie-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:25 http://172.17.4.1/private trixie-staging/main armhf man-db armhf 2.12.0-1 [1358 kB]
Get:26 http://172.17.4.1/private trixie-staging/main armhf sensible-utils all 0.0.20 [19.3 kB]
Get:27 http://172.17.4.1/private trixie-staging/main armhf bash-completion all 1:2.11-8 [224 kB]
Get:28 http://172.17.4.1/private trixie-staging/main armhf openssl armhf 3.0.11-1 [1367 kB]
Get:29 http://172.17.4.1/private trixie-staging/main armhf ca-certificates all 20230311 [153 kB]
Get:30 http://172.17.4.1/private trixie-staging/main armhf libmagic-mgc armhf 1:5.45-2 [314 kB]
Get:31 http://172.17.4.1/private trixie-staging/main armhf libmagic1 armhf 1:5.45-2 [96.1 kB]
Get:32 http://172.17.4.1/private trixie-staging/main armhf file armhf 1:5.45-2 [41.6 kB]
Get:33 http://172.17.4.1/private trixie-staging/main armhf gettext-base armhf 0.21-13 [156 kB]
Get:34 http://172.17.4.1/private trixie-staging/main armhf m4 armhf 1.4.19-4 [256 kB]
Get:35 http://172.17.4.1/private trixie-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:36 http://172.17.4.1/private trixie-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:37 http://172.17.4.1/private trixie-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:38 http://172.17.4.1/private trixie-staging/main armhf autopoint all 0.21-13 [496 kB]
Get:39 http://172.17.4.1/private trixie-staging/main armhf libtcl8.6 armhf 8.6.13+dfsg-2 [904 kB]
Get:40 http://172.17.4.1/private trixie-staging/main armhf libbrotli1 armhf 1.1.0-2 [280 kB]
Get:41 http://172.17.4.1/private trixie-staging/main armhf libpng16-16 armhf 1.6.40-2 [258 kB]
Get:42 http://172.17.4.1/private trixie-staging/main armhf libfreetype6 armhf 2.13.2+dfsg-1 [366 kB]
Get:43 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-mono all 2.37-8 [489 kB]
Get:44 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-core all 2.37-8 [840 kB]
Get:45 http://172.17.4.1/private trixie-staging/main armhf fontconfig-config armhf 2.14.2-6 [316 kB]
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Get:47 http://172.17.4.1/private trixie-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:48 http://172.17.4.1/private trixie-staging/main armhf libbsd0 armhf 0.11.7-4 [111 kB]
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Get:53 http://172.17.4.1/private trixie-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:54 http://172.17.4.1/private trixie-staging/main armhf libxft2 armhf 2.3.6-1 [53.7 kB]
Get:55 http://172.17.4.1/private trixie-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:56 http://172.17.4.1/private trixie-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:57 http://172.17.4.1/private trixie-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:58 http://172.17.4.1/private trixie-staging/main armhf libtk8.6 armhf 8.6.13-2 [680 kB]
Get:59 http://172.17.4.1/private trixie-staging/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-4.1 [477 kB]
Get:60 http://172.17.4.1/private trixie-staging/main armhf blt armhf 2.5.3+dfsg-4.1 [14.9 kB]
Get:61 http://172.17.4.1/private trixie-staging/main armhf cython3 armhf 0.29.36-3 [1731 kB]
Get:62 http://172.17.4.1/private trixie-staging/main armhf libdebhelper-perl all 13.11.8 [82.1 kB]
Get:63 http://172.17.4.1/private trixie-staging/main armhf libtool all 2.4.7-7 [517 kB]
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Get:65 http://172.17.4.1/private trixie-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:66 http://172.17.4.1/private trixie-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:67 http://172.17.4.1/private trixie-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:68 http://172.17.4.1/private trixie-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:69 http://172.17.4.1/private trixie-staging/main armhf libelf1 armhf 0.188-2.1+rpi1 [171 kB]
Get:70 http://172.17.4.1/private trixie-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:71 http://172.17.4.1/private trixie-staging/main armhf libicu72 armhf 72.1-4 [9009 kB]
Get:72 http://172.17.4.1/private trixie-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.3 [571 kB]
Get:73 http://172.17.4.1/private trixie-staging/main armhf gettext armhf 0.21-13 [1201 kB]
Get:74 http://172.17.4.1/private trixie-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:75 http://172.17.4.1/private trixie-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:76 http://172.17.4.1/private trixie-staging/main armhf debhelper all 13.11.8 [956 kB]
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Get:82 http://172.17.4.1/private trixie-staging/main armhf xml-core all 0.18+nmu1 [23.8 kB]
Get:83 http://172.17.4.1/private trixie-staging/main armhf docutils-common all 0.20.1+dfsg-2 [128 kB]
Get:84 http://172.17.4.1/private trixie-staging/main armhf fonts-lyx all 2.3.7-1 [186 kB]
Get:85 http://172.17.4.1/private trixie-staging/main armhf help2man armhf 1.49.3 [198 kB]
Get:86 http://172.17.4.1/private trixie-staging/main armhf libaec0 armhf 1.1.2-1 [21.3 kB]
Get:87 http://172.17.4.1/private trixie-staging/main armhf libblas3 armhf 3.11.0-2 [100.0 kB]
Get:88 http://172.17.4.1/private trixie-staging/main armhf libnghttp2-14 armhf 1.58.0-1 [61.7 kB]
Get:89 http://172.17.4.1/private trixie-staging/main armhf libpsl5 armhf 0.21.2-1+b1 [57.8 kB]
Get:90 http://172.17.4.1/private trixie-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:91 http://172.17.4.1/private trixie-staging/main armhf libssh2-1 armhf 1.11.0-3 [195 kB]
Get:92 http://172.17.4.1/private trixie-staging/main armhf libcurl4 armhf 8.4.0-2+rpi1 [362 kB]
Get:93 http://172.17.4.1/private trixie-staging/main armhf libdeflate0 armhf 1.18-1 [38.3 kB]
Get:94 http://172.17.4.1/private trixie-staging/main armhf libexpat1-dev armhf 2.5.0-2 [130 kB]
Get:95 http://172.17.4.1/private trixie-staging/main armhf libfribidi0 armhf 1.0.13-3 [69.9 kB]
Get:96 http://172.17.4.1/private trixie-staging/main armhf libgfortran5 armhf 13.2.0-5+rpi1 [247 kB]
Get:97 http://172.17.4.1/private trixie-staging/main armhf libglib2.0-0 armhf 2.78.1-4 [1257 kB]
Get:98 http://172.17.4.1/private trixie-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:99 http://172.17.4.1/private trixie-staging/main armhf libharfbuzz0b armhf 8.0.1-1 [2098 kB]
Get:100 http://172.17.4.1/private trixie-staging/main armhf libsz2 armhf 1.1.2-1 [7700 B]
Get:101 http://172.17.4.1/private trixie-staging/main armhf libhdf5-103-1 armhf 1.10.10+repack-3 [1215 kB]
Get:102 http://172.17.4.1/private trixie-staging/main armhf libhdf5-hl-100 armhf 1.10.10+repack-3 [59.9 kB]
Get:103 http://172.17.4.1/private trixie-staging/main armhf libimagequant0 armhf 2.18.0-1 [30.5 kB]
Get:104 http://172.17.4.1/private trixie-staging/main armhf libjbig0 armhf 2.1-6.1 [27.0 kB]
Get:105 http://172.17.4.1/private trixie-staging/main armhf libjpeg62-turbo armhf 1:2.1.5-2 [143 kB]
Get:106 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-isonscreen all 1.2.0-1.1 [3196 B]
Get:107 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-metadata all 12-4 [6532 B]
Get:108 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [184 kB]
Get:109 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.2 kB]
Get:110 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get:111 http://172.17.4.1/private trixie-staging/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:112 http://172.17.4.1/private trixie-staging/main armhf libjs-sphinxdoc all 7.2.6-2 [149 kB]
Get:113 http://172.17.4.1/private trixie-staging/main armhf libjson-perl all 4.10000-1 [87.5 kB]
Get:114 http://172.17.4.1/private trixie-staging/main armhf liblapack3 armhf 3.11.0-2 [1624 kB]
Get:115 http://172.17.4.1/private trixie-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.4-1 [24.4 kB]
Get:116 http://172.17.4.1/private trixie-staging/main armhf liblcms2-2 armhf 2.14-2 [124 kB]
Get:117 http://172.17.4.1/private trixie-staging/main armhf liblerc4 armhf 4.0.0+ds-3 [133 kB]
Get:118 http://172.17.4.1/private trixie-staging/main armhf liblzf1 armhf 3.6-4 [9296 B]
Get:119 http://172.17.4.1/private trixie-staging/main armhf libopenjp2-7 armhf 2.5.0-2 [164 kB]
Get:120 http://172.17.4.1/private trixie-staging/main armhf libpython3.11 armhf 3.11.6-3 [1662 kB]
Get:121 http://172.17.4.1/private trixie-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-3 [901 kB]
Get:122 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-dev armhf 3.11.6-3 [3271 kB]
Get:123 http://172.17.4.1/private trixie-staging/main armhf libpython3-dev armhf 3.11.4-5 [9432 B]
Get:124 http://172.17.4.1/private trixie-staging/main armhf libpython3-all-dev armhf 3.11.4-5 [1068 B]
Get:125 http://172.17.4.1/private trixie-staging/main armhf libqhull-r8.0 armhf 2020.2-6 [216 kB]
Get:126 http://172.17.4.1/private trixie-staging/main armhf libraqm0 armhf 0.10.1-1 [11.7 kB]
Get:127 http://172.17.4.1/private trixie-staging/main armhf libsharpyuv0 armhf 1.3.2-0.3 [106 kB]
Get:128 http://172.17.4.1/private trixie-staging/main armhf libwebp7 armhf 1.3.2-0.3 [261 kB]
Get:129 http://172.17.4.1/private trixie-staging/main armhf libtiff6 armhf 4.5.1+git230720-1 [298 kB]
Get:130 http://172.17.4.1/private trixie-staging/main armhf libwebpdemux2 armhf 1.3.2-0.3 [106 kB]
Get:131 http://172.17.4.1/private trixie-staging/main armhf libwebpmux3 armhf 1.3.2-0.3 [116 kB]
Get:132 http://172.17.4.1/private trixie-staging/main armhf libxslt1.1 armhf 1.1.35-1 [221 kB]
Get:133 http://172.17.4.1/private trixie-staging/main armhf python-babel-localedata all 2.10.3-3 [5611 kB]
Get:134 http://172.17.4.1/private trixie-staging/main armhf python-matplotlib-data all 3.6.3-1 [2744 kB]
Get:135 http://172.17.4.1/private trixie-staging/main armhf python3-alabaster all 0.7.12-1 [20.8 kB]
Get:136 http://172.17.4.1/private trixie-staging/main armhf python3-all armhf 3.11.4-5 [1060 B]
Get:137 http://172.17.4.1/private trixie-staging/main armhf python3.11-dev armhf 3.11.6-3 [508 kB]
Get:138 http://172.17.4.1/private trixie-staging/main armhf python3-dev armhf 3.11.4-5 [26.2 kB]
Get:139 http://172.17.4.1/private trixie-staging/main armhf python3-all-dev armhf 3.11.4-5 [1068 B]
Get:140 http://172.17.4.1/private trixie-staging/main armhf python3-appdirs all 1.4.4-4 [12.5 kB]
Get:141 http://172.17.4.1/private trixie-staging/main armhf python3-attr all 23.1.0-2 [67.1 kB]
Get:142 http://172.17.4.1/private trixie-staging/main armhf python3-tz all 2023.3.post1-1 [30.8 kB]
Get:143 http://172.17.4.1/private trixie-staging/main armhf python3-babel all 2.10.3-3 [100.0 kB]
Get:144 http://172.17.4.1/private trixie-staging/main armhf python3-brotli armhf 1.1.0-2 [290 kB]
Get:145 http://172.17.4.1/private trixie-staging/main armhf python3-certifi all 2023.7.22-1 [150 kB]
Get:146 http://172.17.4.1/private trixie-staging/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB]
Get:147 http://172.17.4.1/private trixie-staging/main armhf python3-charset-normalizer all 3.3.2-1 [51.6 kB]
Get:148 http://172.17.4.1/private trixie-staging/main armhf python3-colorama all 0.4.6-4 [36.2 kB]
Get:149 http://172.17.4.1/private trixie-staging/main armhf python3-click all 8.1.6-1 [93.8 kB]
Get:150 http://172.17.4.1/private trixie-staging/main armhf python3-numpy armhf 1:1.24.2-1 [3826 kB]
Get:151 http://172.17.4.1/private trixie-staging/main armhf python3-contourpy armhf 1.0.7-1 [141 kB]
Get:152 http://172.17.4.1/private trixie-staging/main armhf python3-coverage armhf 7.2.7+dfsg1-1 [166 kB]
Get:153 http://172.17.4.1/private trixie-staging/main armhf python3-cycler all 0.11.0-1 [8020 B]
Get:154 http://172.17.4.1/private trixie-staging/main armhf python3-six all 1.16.0-4 [17.5 kB]
Get:155 http://172.17.4.1/private trixie-staging/main armhf python3-dateutil all 2.8.2-3 [78.4 kB]
Get:156 http://172.17.4.1/private trixie-staging/main armhf python3-decorator all 5.1.1-5 [15.1 kB]
Get:157 http://172.17.4.1/private trixie-staging/main armhf python3-roman all 3.3-3 [9880 B]
Get:158 http://172.17.4.1/private trixie-staging/main armhf python3-docutils all 0.20.1+dfsg-2 [389 kB]
Get:159 http://172.17.4.1/private trixie-staging/main armhf python3-scipy armhf 1.10.1-5+rpi1 [13.6 MB]
Get:160 http://172.17.4.1/private trixie-staging/main armhf python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB]
Get:161 http://172.17.4.1/private trixie-staging/main armhf python3-mpmath all 1.2.1-2 [418 kB]
Get:162 http://172.17.4.1/private trixie-staging/main armhf python3-sympy all 1.12-6 [3868 kB]
Get:163 http://172.17.4.1/private trixie-staging/main armhf python3-fs all 2.4.16-2 [95.2 kB]
Get:164 http://172.17.4.1/private trixie-staging/main armhf python3-lxml armhf 4.9.3-1 [1039 kB]
Get:165 http://172.17.4.1/private trixie-staging/main armhf python3-lz4 armhf 4.0.2+dfsg-1+b1 [23.9 kB]
Get:166 http://172.17.4.1/private trixie-staging/main armhf unicode-data all 15.1.0-1 [8547 kB]
Get:167 http://172.17.4.1/private trixie-staging/main armhf python3-fonttools armhf 4.38.0-1 [1047 kB]
Get:168 http://172.17.4.1/private trixie-staging/main armhf python3-future all 0.18.2-6 [348 kB]
Get:169 http://172.17.4.1/private trixie-staging/main armhf python3-h5py-serial armhf 3.9.0-4 [727 kB]
Get:170 http://172.17.4.1/private trixie-staging/main armhf python3-h5py all 3.9.0-4 [14.3 kB]
Get:171 http://172.17.4.1/private trixie-staging/main armhf python3-idna all 3.3-2 [39.1 kB]
Get:172 http://172.17.4.1/private trixie-staging/main armhf python3-imagesize all 1.4.1-1 [6688 B]
Get:173 http://172.17.4.1/private trixie-staging/main armhf python3-iniconfig all 1.1.1-2 [6396 B]
Get:174 http://172.17.4.1/private trixie-staging/main armhf python3-markupsafe armhf 2.1.3-1 [12.8 kB]
Get:175 http://172.17.4.1/private trixie-staging/main armhf python3-jinja2 all 3.1.2-1 [119 kB]
Get:176 http://172.17.4.1/private trixie-staging/main armhf python3-kiwisolver armhf 1.4.4-1 [52.3 kB]
Get:177 http://172.17.4.1/private trixie-staging/main armhf python3-pil armhf 10.0.0-1 [437 kB]
Get:178 http://172.17.4.1/private trixie-staging/main armhf python3-tk armhf 3.11.5-1 [95.9 kB]
Get:179 http://172.17.4.1/private trixie-staging/main armhf python3-pil.imagetk armhf 10.0.0-1 [75.2 kB]
Get:180 http://172.17.4.1/private trixie-staging/main armhf python3-pyparsing all 3.1.1-1 [145 kB]
Get:181 http://172.17.4.1/private trixie-staging/main armhf python3-packaging all 23.2-1 [44.8 kB]
Get:182 http://172.17.4.1/private trixie-staging/main armhf python3-matplotlib armhf 3.6.3-1 [7453 kB]
Get:183 http://172.17.4.1/private trixie-staging/main armhf sphinx-common all 7.2.6-2 [703 kB]
Get:184 http://172.17.4.1/private trixie-staging/main armhf python3-pygments all 2.15.1+dfsg-1 [817 kB]
Get:185 http://172.17.4.1/private trixie-staging/main armhf python3-urllib3 all 1.26.18-1 [116 kB]
Get:186 http://172.17.4.1/private trixie-staging/main armhf python3-requests all 2.31.0+dfsg-1 [68.6 kB]
Get:187 http://172.17.4.1/private trixie-staging/main armhf python3-snowballstemmer all 2.2.0-4 [58.0 kB]
Get:188 http://172.17.4.1/private trixie-staging/main armhf python3-sphinx all 7.2.6-2 [552 kB]
Get:189 http://172.17.4.1/private trixie-staging/main armhf python3-numpydoc all 1.5.0-1 [43.0 kB]
Get:190 http://172.17.4.1/private trixie-staging/main armhf python3-pandas-lib armhf 1.5.3+dfsg-6 [3000 kB]
Get:191 http://172.17.4.1/private trixie-staging/main armhf python3-pandas all 1.5.3+dfsg-6 [2886 kB]
Get:192 http://172.17.4.1/private trixie-staging/main armhf python3-pluggy all 1.3.0-1 [25.1 kB]
Get:193 http://172.17.4.1/private trixie-staging/main armhf python3-pytest all 7.4.3-1 [239 kB]
Get:194 http://172.17.4.1/private trixie-staging/main armhf python3-pytest-cov all 4.1.0-1 [26.7 kB]
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Setting up media-types (10.1.0) ...
Setting up libpipeline1:armhf (1.5.7-1) ...
Setting up libgraphite2-3:armhf (1.3.14-1) ...
Setting up liblcms2-2:armhf (2.14-2) ...
Setting up libsharpyuv0:armhf (1.3.2-0.3) ...
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Setting up libpsl5:armhf (0.21.2-1+b1) ...
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Setting up bsdextrautils (2.39.2-6) ...
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Setting up libglib2.0-0:armhf (2.78.1-4) ...
No schema files found: doing nothing.
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Setting up libpython3.11-stdlib:armhf (3.11.6-3) ...
Setting up libdebhelper-perl (13.11.8) ...
Setting up libbrotli1:armhf (1.1.0-2) ...
Setting up x11-common (1:7.7+23) ...
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of restart.
Setting up libnghttp2-14:armhf (1.58.0-1) ...
Setting up libmagic1:armhf (1:5.45-2) ...
Setting up libdeflate0:armhf (1.18-1) ...
Setting up gettext-base (0.21-13) ...
Setting up m4 (1.4.19-4) ...
Setting up libqhull-r8.0:armhf (2020.2-6) ...
Setting up file (1:5.45-2) ...
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Setting up python-babel-localedata (2.10.3-3) ...
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Setting up libblas3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
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Setting up libjpeg62-turbo:armhf (1:2.1.5-2) ...
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Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up bash-completion (1:2.11-8) ...
Setting up liblzf1:armhf (3.6-4) ...
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Setting up mount (2.39.2-6) ...
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Setting up python-matplotlib-data (3.6.3-1) ...
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Setting up libpython3-stdlib:armhf (3.11.4-5) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
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Updating certificates in /etc/ssl/certs...
140 added, 0 removed; done.
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Setting up libfreetype6:armhf (2.13.2+dfsg-1) ...
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Setting up libjs-jquery-isonscreen (1.2.0-1.1) ...
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Setting up python3-urllib3 (1.26.18-1) ...
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Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up dwz (0.15-1) ...
Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ...
Setting up groff-base (1.23.0-3) ...
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Setting up libxslt1.1:armhf (1.1.35-1) ...
Setting up libcurl4:armhf (8.4.0-2+rpi1) ...
Setting up libx11-6:armhf (2:1.8.7-1) ...
Setting up libharfbuzz0b:armhf (8.0.1-1) ...
Setting up python3-dateutil (2.8.2-3) ...
Setting up libfontconfig1:armhf (2.14.2-6) ...
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Setting up python3-setuptools (68.1.2-2) ...
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Setting up python3-babel (2.10.3-3) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python3-colorama (0.4.6-4) ...
Setting up python3-lz4 (4.0.2+dfsg-1+b1) ...
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Setting up python3-charset-normalizer (3.3.2-1) ...
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Setting up python3-alabaster (0.7.12-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up python3-all (3.11.4-5) ...
Setting up python3-coverage (7.2.7+dfsg1-1) ...
Setting up python3-pytest-cov (4.1.0-1) ...
Setting up python3-click (8.1.6-1) ...
Setting up man-db (2.12.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-fs (2.4.16-2) ...
Setting up python3-pygments (2.15.1+dfsg-1) ...
Setting up python3-chardet (5.2.0+dfsg-1) ...
Setting up libpython3-all-dev:armhf (3.11.4-5) ...
Setting up libraqm0:armhf (0.10.1-1) ...
Setting up sphinx-common (7.2.6-2) ...
Setting up python3-dev (3.11.4-5) ...
Setting up python3-requests (2.31.0+dfsg-1) ...
Setting up python3-numpy (1:1.24.2-1) ...
Setting up libhdf5-103-1:armhf (1.10.10+repack-3) ...
Setting up python3-lxml:armhf (4.9.3-1) ...
Setting up python3-contourpy (1.0.7-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up python3-future (0.18.2-6) ...
update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode
update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode
Setting up libhdf5-hl-100:armhf (1.10.10+repack-3) ...
Setting up dh-python (6.20231107) ...
Setting up python3-all-dev (3.11.4-5) ...
Setting up libxft2:armhf (2.3.6-1) ...
Setting up python3-scipy (1.10.1-5+rpi1) ...
Setting up libtk8.6:armhf (8.6.13-2) ...
Setting up python3-pandas-lib:armhf (1.5.3+dfsg-6) ...
Setting up python3-h5py-serial (3.9.0-4) ...
Setting up debhelper (13.11.8) ...
Setting up python3-pandas (1.5.3+dfsg-6) ...
Setting up python3-h5py (3.9.0-4) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ...
Setting up blt (2.5.3+dfsg-4.1) ...
Setting up python3-tk:armhf (3.11.5-1) ...
Setting up python3-pil:armhf (10.0.0-1) ...
Setting up python3-pil.imagetk:armhf (10.0.0-1) ...
Setting up python3-ufolib2 (0.16.0+dfsg1-1) ...
Setting up python3-fonttools (4.38.0-1) ...
Setting up python3-matplotlib (3.6.3-1) ...
Processing triggers for libc-bin (2.37-12+rpi2) ...
Processing triggers for sgml-base (1.31) ...
Setting up docutils-common (0.20.1+dfsg-2) ...
Processing triggers for sgml-base (1.31) ...
Setting up python3-docutils (0.20.1+dfsg-2) ...
Setting up python3-sphinx (7.2.6-2) ...
Setting up python3-numpydoc (1.5.0-1) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20230311) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.47-v8+ #1 SMP PREEMPT Fri Sep 1 07:05:33 BST 2023 arm64 (aarch64)
Toolchain package versions: binutils_2.41-6+rpi1 dpkg-dev_1.22.1+rpi1 g++-12_12.3.0-10+rpi1 g++-13_13.2.0-5+rpi1 gcc-12_12.3.0-10+rpi1 gcc-13_13.2.0-5+rpi1 libc6-dev_2.37-12+rpi2 libstdc++-12-dev_12.3.0-10+rpi1 libstdc++-13-dev_13.2.0-5+rpi1 libstdc++6_13.2.0-5+rpi1 linux-libc-dev_6.5.6-1+rpi1
Package versions: adduser_3.137 apt_2.7.6 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13+rpi1 base-passwd_3.6.2 bash_5.2.15-2 bash-completion_1:2.11-8 binutils_2.41-6+rpi1 binutils-arm-linux-gnueabihf_2.41-6+rpi1 binutils-common_2.41-6+rpi1 blt_2.5.3+dfsg-4.1 bsdextrautils_2.39.2-6 bsdutils_1:2.39.2-6 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20230311 coreutils_9.1-1 cpp_4:13.2.0-1+rpi1 cpp-12_12.3.0-10+rpi1 cpp-13_13.2.0-5+rpi1 cython3_0.29.36-3 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.8 debianutils_5.14 dh-autoreconf_20 dh-python_6.20231107 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dirmngr_2.2.40-1.1 docutils-common_0.20.1+dfsg-2 dpkg_1.22.1+rpi1 dpkg-dev_1.22.1+rpi1 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.32.1-1 file_1:5.45-2 findutils_4.9.0-5 fontconfig-config_2.14.2-6 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lyx_2.3.7-1 g++_4:13.2.0-1+rpi1 g++-12_12.3.0-10+rpi1 g++-13_13.2.0-5+rpi1 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+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 3.0 (quilt)
Source: python-biom-format
Binary: python3-biom-format, python-biom-format-doc
Architecture: any all
Version: 2.1.15.2-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>, Étienne Mollier <emollier@debian.org>
Homepage: https://biom-format.org/
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/python-biom-format
Vcs-Git: https://salsa.debian.org/med-team/python-biom-format.git
Testsuite: autopkgtest, autopkgtest-pkg-python
Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-numpy, python3-numpydoc, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest <!nocheck>, python3-pytest-cov <!nocheck>
Package-List:
python-biom-format-doc deb doc optional arch=all
python3-biom-format deb python optional arch=any
Checksums-Sha1:
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2fc803512376c0f54d45b9daadf2729a983c35e1 10644 python-biom-format_2.1.15.2-1.debian.tar.xz
Checksums-Sha256:
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Files:
4bb9c5c75c32075a3ba83422ebb8f849 11870335 python-biom-format_2.1.15.2.orig.tar.gz
a15eadf83d712d9e46c26ab389bc7d16 10644 python-biom-format_2.1.15.2-1.debian.tar.xz
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gpgv: Signature made Tue Nov 21 07:06:03 2023 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./python-biom-format_2.1.15.2-1.dsc: no acceptable signature found
dpkg-source: info: extracting python-biom-format in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking python-biom-format_2.1.15.2.orig.tar.gz
dpkg-source: info: unpacking python-biom-format_2.1.15.2-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying ignore_local_dist-packages.patch
dpkg-source: info: applying no-web-adds.patch
dpkg-source: info: applying fix_future_import.patch
dpkg-source: info: applying sphinx_1.6.patch
dpkg-source: info: applying posix_shell.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=trixie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=trixie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=124
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=trixie-staging-armhf-sbuild-5fe5c187-a4b9-4d15-93b2-dd42f6281474
SCHROOT_UID=114
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage --sanitize-env -us -uc -mRaspbian pi5 test autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package python-biom-format
dpkg-buildpackage: info: source version 2.1.15.2-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --with python3,bash-completion,sphinxdoc --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
pybuild --clean -i python{version} -p 3.11
I: pybuild base:310: python3.11 setup.py clean
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_filter.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_subsample.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_transform.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
Compiling biom/_filter.pyx because it changed.
Compiling biom/_transform.pyx because it changed.
Compiling biom/_subsample.pyx because it changed.
[1/3] Cythonizing biom/_filter.pyx
[2/3] Cythonizing biom/_subsample.pyx
[3/3] Cythonizing biom/_transform.pyx
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build' (and everything under it)
'build/bdist.linux-armv7l' does not exist -- can't clean it
'build/scripts-3.11' does not exist -- can't clean it
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars ./biom/_filter.c ./biom/_subsample.c ./biom/_transform.c debian/files
rm -fr -- debian/python3-biom-format/ debian/tmp/ debian/python-biom-format-doc/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
debian/rules binary-arch
dh binary-arch --with python3,bash-completion,sphinxdoc --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
pybuild --configure -i python{version} -p 3.11
I: pybuild base:310: python3.11 setup.py config
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_filter.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_subsample.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_transform.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
Compiling biom/_filter.pyx because it changed.
Compiling biom/_transform.pyx because it changed.
Compiling biom/_subsample.pyx because it changed.
[1/3] Cythonizing biom/_filter.pyx
[2/3] Cythonizing biom/_subsample.pyx
[3/3] Cythonizing biom/_transform.pyx
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# arch
USE_CYTHON=true dh_auto_build
pybuild --build -i python{version} -p 3.11
I: pybuild base:310: /usr/bin/python3 setup.py build
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/err.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/exception.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/parse.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/installation_informer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/metadata_adder.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/metadata_exporter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_converter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_head.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_ids.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_normalizer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_subsetter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_summarizer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_validator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/uc_processor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/long_lines.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/test_err.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/test_parse.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/test_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/test_util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_add_metadata.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_show_install_info.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_subset_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_summarize_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_converter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_normalizer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_uc_processor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_validate_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
running egg_info
creating biom_format.egg-info
writing biom_format.egg-info/PKG-INFO
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing entry points to biom_format.egg-info/entry_points.txt
writing requirements to biom_format.egg-info/requires.txt
writing top-level names to biom_format.egg-info/top_level.txt
writing manifest file 'biom_format.egg-info/SOURCES.txt'
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no directories found matching 'support_files'
warning: no directories found matching 'tests/test_data'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
adding license file 'COPYING.txt'
writing manifest file 'biom_format.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.assets' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'biom.assets' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'biom.assets' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'biom.assets' to be distributed and are
already explicitly excluding 'biom.assets' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.tests.bench_tables' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'biom.tests.bench_tables' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'biom.tests.bench_tables' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'biom.tests.bench_tables' to be distributed and are
already explicitly excluding 'biom.tests.bench_tables' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.tests.test_cli.test_data' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'biom.tests.test_cli.test_data' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'biom.tests.test_cli.test_data' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'biom.tests.test_cli.test_data' to be distributed and are
already explicitly excluding 'biom.tests.test_cli.test_data' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
copying biom/_filter.pyx -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/_subsample.pyx -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/_transform.pyx -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/assets
copying biom/assets/exercise_api.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/assets
copying biom/assets/exercise_cli.sh -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/assets
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_data/bad_table.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/bad_table.txt.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/empty.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/no-contents.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test_grp_metadata.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
running build_ext
building 'biom._filter' extension
creating build
creating build/temp.linux-armv7l-cpython-311
creating build/temp.linux-armv7l-cpython-311/biom
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c biom/_filter.c -o build/temp.linux-armv7l-cpython-311/biom/_filter.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
from biom/_filter.c:774:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-311/biom/_filter.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_filter.cpython-311-arm-linux-gnueabihf.so
building 'biom._transform' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c biom/_transform.c -o build/temp.linux-armv7l-cpython-311/biom/_transform.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
from biom/_transform.c:774:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-311/biom/_transform.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_transform.cpython-311-arm-linux-gnueabihf.so
building 'biom._subsample' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c biom/_subsample.c -o build/temp.linux-armv7l-cpython-311/biom/_subsample.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
from biom/_subsample.c:774:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-311/biom/_subsample.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_subsample.cpython-311-arm-linux-gnueabihf.so
# indep:
PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b html doc build/html
Running Sphinx v7.2.6
making output directory... done
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
WARNING: Failed to import biom.
Possible hints:
* KeyError: 'biom'
* ModuleNotFoundError: No module named 'biom._filter'
WARNING: Failed to import biom.table.
Possible hints:
* KeyError: 'biom'
* ModuleNotFoundError: No module named 'biom._filter'
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 12 source files that are out of date
updating environment: [new config] 12 added, 0 changed, 0 removed
[2Kreading sources... [ 8%] BIOM_LICENSE
[2Kreading sources... [ 17%] documentation/adding_metadata
[2Kreading sources... [ 25%] documentation/biom_conversion
[2Kreading sources... [ 33%] documentation/biom_format
[2Kreading sources... [ 42%] documentation/format_versions/biom-1.0
[2Kreading sources... [ 50%] documentation/format_versions/biom-2.0
[2Kreading sources... [ 58%] documentation/format_versions/biom-2.1
[2Kreading sources... [ 67%] documentation/index
[2Kreading sources... [ 75%] documentation/quick_usage_examples
[2Kreading sources... [ 83%] documentation/summarizing_biom_tables
[2Kreading sources... [ 92%] documentation/table_objects
[2Kreading sources... [100%] index
WARNING: autodoc: failed to import module 'biom'; the following exception was raised:
No module named 'biom._filter'
WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised:
No module named 'biom._filter'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
copying assets... copying static files... done
copying extra files... done
done
[2Kwriting output... [ 8%] BIOM_LICENSE
[2Kwriting output... [ 17%] documentation/adding_metadata
[2Kwriting output... [ 25%] documentation/biom_conversion
[2Kwriting output... [ 33%] documentation/biom_format
[2Kwriting output... [ 42%] documentation/format_versions/biom-1.0
[2Kwriting output... [ 50%] documentation/format_versions/biom-2.0
[2Kwriting output... [ 58%] documentation/format_versions/biom-2.1
[2Kwriting output... [ 67%] documentation/index
[2Kwriting output... [ 75%] documentation/quick_usage_examples
[2Kwriting output... [ 83%] documentation/summarizing_biom_tables
[2Kwriting output... [ 92%] documentation/table_objects
[2Kwriting output... [100%] index
/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated
generating indices... done
writing additional pages... search done
[2Kcopying images... [100%] _static/biom-format.png
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 8 warnings.
The HTML pages are in build/html.
PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b man doc build/man
Running Sphinx v7.2.6
making output directory... done
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
WARNING: Failed to import biom.
Possible hints:
* KeyError: 'biom'
* ModuleNotFoundError: No module named 'biom._filter'
WARNING: Failed to import biom.table.
Possible hints:
* KeyError: 'biom'
* ModuleNotFoundError: No module named 'biom._filter'
building [mo]: targets for 0 po files that are out of date
writing output...
building [man]: all manpages
updating environment: [new config] 12 added, 0 changed, 0 removed
[2Kreading sources... [ 8%] BIOM_LICENSE
[2Kreading sources... [ 17%] documentation/adding_metadata
[2Kreading sources... [ 25%] documentation/biom_conversion
[2Kreading sources... [ 33%] documentation/biom_format
[2Kreading sources... [ 42%] documentation/format_versions/biom-1.0
[2Kreading sources... [ 50%] documentation/format_versions/biom-2.0
[2Kreading sources... [ 58%] documentation/format_versions/biom-2.1
[2Kreading sources... [ 67%] documentation/index
[2Kreading sources... [ 75%] documentation/quick_usage_examples
[2Kreading sources... [ 83%] documentation/summarizing_biom_tables
[2Kreading sources... [ 92%] documentation/table_objects
[2Kreading sources... [100%] index
WARNING: autodoc: failed to import module 'biom'; the following exception was raised:
No module named 'biom._filter'
WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised:
No module named 'biom._filter'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/format_versions/biom-2.1 documentation/quick_usage_examples documentation/table_objects documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE } done
build succeeded, 4 warnings.
The manual pages are in build/man.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a -O--buildsystem=pybuild
pybuild --test --test-pytest -i python{version} -p 3.11
I: pybuild pybuild:314: cp -r /<<PKGBUILDDIR>>/examples /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build
I: pybuild base:310: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build; python3.11 -m pytest
============================= test session starts ==============================
platform linux -- Python 3.11.6, pytest-7.4.3, pluggy-1.3.0
rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build
configfile: pytest.ini
testpaths: biom
plugins: cov-4.1.0
collected 376 items
biom/tests/test_err.py ..................... [ 5%]
biom/tests/test_parse.py ........................... [ 12%]
biom/tests/test_table.py ............................................... [ 25%]
..sss................................................................... [ 44%]
.....sss................................................................ [ 63%]
..............................F...F.F..F............................. [ 81%]
biom/tests/test_util.py ..........F......... [ 87%]
biom/tests/test_cli/test_add_metadata.py .... [ 88%]
biom/tests/test_cli/test_show_install_info.py . [ 88%]
biom/tests/test_cli/test_subset_table.py ..... [ 89%]
biom/tests/test_cli/test_summarize_table.py .. [ 90%]
biom/tests/test_cli/test_table_converter.py ...... [ 92%]
biom/tests/test_cli/test_table_normalizer.py . [ 92%]
biom/tests/test_cli/test_uc_processor.py ...... [ 93%]
biom/tests/test_cli/test_validate_table.py ....................... [100%]
=================================== FAILURES ===================================
_______________________ SparseTableTests.test_subsample ________________________
obj = array([0]), method = 'repeat', args = (array([5], dtype=int64),)
kwds = {'axis': None}
bound = <built-in method repeat of numpy.ndarray object at 0xf0b51350>
def _wrapfunc(obj, method, *args, **kwds):
bound = getattr(obj, method, None)
if bound is None:
return _wrapit(obj, method, *args, **kwds)
try:
> return bound(*args, **kwds)
E TypeError: Cannot cast array data from dtype('int64') to dtype('int32') according to the rule 'safe'
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:57: TypeError
During handling of the above exception, another exception occurred:
self = <biom.tests.test_table.SparseTableTests testMethod=test_subsample>
def test_subsample(self):
table = Table(np.array([[0, 5, 0]]), ['O1'], ['S1', 'S2', 'S3'])
> obs = table.subsample(5, axis='observation')
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py:3244:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/table.py:2990: in subsample
_subsample(data, n, with_replacement, rng)
biom/_subsample.pyx:64: in biom._subsample._subsample
???
<__array_function__ internals>:200: in repeat
???
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:479: in repeat
return _wrapfunc(a, 'repeat', repeats, axis=axis)
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:66: in _wrapfunc
return _wrapit(obj, method, *args, **kwds)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
obj = array([0]), method = 'repeat', args = (array([5], dtype=int64),)
kwds = {'axis': None}
wrap = <built-in method __array_wrap__ of numpy.ndarray object at 0xf0b51350>
def _wrapit(obj, method, *args, **kwds):
try:
wrap = obj.__array_wrap__
except AttributeError:
wrap = None
> result = getattr(asarray(obj), method)(*args, **kwds)
E TypeError: Cannot cast array data from dtype('int64') to dtype('int32') according to the rule 'safe'
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:43: TypeError
_________________ SparseTableTests.test_subsample_md_copy_bug __________________
obj = array([0]), method = 'repeat', args = (array([5], dtype=int64),)
kwds = {'axis': None}
bound = <built-in method repeat of numpy.ndarray object at 0xf0c43830>
def _wrapfunc(obj, method, *args, **kwds):
bound = getattr(obj, method, None)
if bound is None:
return _wrapit(obj, method, *args, **kwds)
try:
> return bound(*args, **kwds)
E TypeError: Cannot cast array data from dtype('int64') to dtype('int32') according to the rule 'safe'
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:57: TypeError
During handling of the above exception, another exception occurred:
self = <biom.tests.test_table.SparseTableTests testMethod=test_subsample_md_copy_bug>
def test_subsample_md_copy_bug(self):
"""subsample would except when if metadata were present"""
table = Table(np.array([[5, 5, 5]]), ['O1'], ['S1', 'S2', 'S3'],
[{'foo': 'bar'}], [{1: 2}, {3: 4}, {5: 6}])
exp = table.copy()
> obs = table.subsample(5)
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py:3266:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/table.py:2990: in subsample
_subsample(data, n, with_replacement, rng)
biom/_subsample.pyx:64: in biom._subsample._subsample
???
<__array_function__ internals>:200: in repeat
???
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:479: in repeat
return _wrapfunc(a, 'repeat', repeats, axis=axis)
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:66: in _wrapfunc
return _wrapit(obj, method, *args, **kwds)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
obj = array([0]), method = 'repeat', args = (array([5], dtype=int64),)
kwds = {'axis': None}
wrap = <built-in method __array_wrap__ of numpy.ndarray object at 0xf0c43830>
def _wrapit(obj, method, *args, **kwds):
try:
wrap = obj.__array_wrap__
except AttributeError:
wrap = None
> result = getattr(asarray(obj), method)(*args, **kwds)
E TypeError: Cannot cast array data from dtype('int64') to dtype('int32') according to the rule 'safe'
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:43: TypeError
________ SparseTableTests.test_subsample_same_seed_without_replacement _________
obj = array([0]), method = 'repeat', args = (array([3], dtype=int64),)
kwds = {'axis': None}
bound = <built-in method repeat of numpy.ndarray object at 0xf0b60f50>
def _wrapfunc(obj, method, *args, **kwds):
bound = getattr(obj, method, None)
if bound is None:
return _wrapit(obj, method, *args, **kwds)
try:
> return bound(*args, **kwds)
E TypeError: Cannot cast array data from dtype('int64') to dtype('int32') according to the rule 'safe'
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:57: TypeError
During handling of the above exception, another exception occurred:
self = <biom.tests.test_table.SparseTableTests testMethod=test_subsample_same_seed_without_replacement>
def test_subsample_same_seed_without_replacement(self):
table = Table(np.array([[3, 1, 2], [0, 3, 4]]), ['O1', 'O2'],
['S1', 'S2', 'S3'])
> exp = table.subsample(2, seed=1234)
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py:3176:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/table.py:2990: in subsample
_subsample(data, n, with_replacement, rng)
biom/_subsample.pyx:64: in biom._subsample._subsample
???
<__array_function__ internals>:200: in repeat
???
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:479: in repeat
return _wrapfunc(a, 'repeat', repeats, axis=axis)
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:66: in _wrapfunc
return _wrapit(obj, method, *args, **kwds)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
obj = array([0]), method = 'repeat', args = (array([3], dtype=int64),)
kwds = {'axis': None}
wrap = <built-in method __array_wrap__ of numpy.ndarray object at 0xf0b60f50>
def _wrapit(obj, method, *args, **kwds):
try:
wrap = obj.__array_wrap__
except AttributeError:
wrap = None
> result = getattr(asarray(obj), method)(*args, **kwds)
E TypeError: Cannot cast array data from dtype('int64') to dtype('int32') according to the rule 'safe'
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:43: TypeError
______ SparseTableTests.test_subsample_without_replacement_unique_results ______
obj = array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]), method = 'repeat'
args = (array([2, 1, 2, 1, 8, 6, 3, 3, 5, 5], dtype=int64),)
kwds = {'axis': None}
bound = <built-in method repeat of numpy.ndarray object at 0xf0c2ce60>
def _wrapfunc(obj, method, *args, **kwds):
bound = getattr(obj, method, None)
if bound is None:
return _wrapit(obj, method, *args, **kwds)
try:
> return bound(*args, **kwds)
E TypeError: Cannot cast array data from dtype('int64') to dtype('int32') according to the rule 'safe'
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:57: TypeError
During handling of the above exception, another exception occurred:
self = <biom.tests.test_table.SparseTableTests testMethod=test_subsample_without_replacement_unique_results>
def test_subsample_without_replacement_unique_results(self):
"""
As in scikit-bio. Given a vector of observations, the total number of
unique subsamplings when n == sum(vector) - 1 should be equal to the
number of unique categories of observations when the vector is
subsampled without replacement. If the vector is subsamples *with*
replacement, however, there should be more than 10 different
possible subsamplings.
"""
a = np.array([[2, 1, 2, 1, 8, 6, 3, 3, 5, 5], ]).T
dt = Table(data=a, sample_ids=['S1', ],
observation_ids=[f'OTU{i:02d}' for i in range(10)])
actual = set()
for i in range(1000):
> obs = dt.subsample(35)
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py:3290:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/table.py:2990: in subsample
_subsample(data, n, with_replacement, rng)
biom/_subsample.pyx:64: in biom._subsample._subsample
???
<__array_function__ internals>:200: in repeat
???
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:479: in repeat
return _wrapfunc(a, 'repeat', repeats, axis=axis)
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:66: in _wrapfunc
return _wrapit(obj, method, *args, **kwds)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
obj = array([0, 1, 2, 3, 4, 5, 6, 7, 8, 9]), method = 'repeat'
args = (array([2, 1, 2, 1, 8, 6, 3, 3, 5, 5], dtype=int64),)
kwds = {'axis': None}
wrap = <built-in method __array_wrap__ of numpy.ndarray object at 0xf0c2ce60>
def _wrapit(obj, method, *args, **kwds):
try:
wrap = obj.__array_wrap__
except AttributeError:
wrap = None
> result = getattr(asarray(obj), method)(*args, **kwds)
E TypeError: Cannot cast array data from dtype('int64') to dtype('int32') according to the rule 'safe'
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:43: TypeError
______________________ UtilTests.test_generate_subsamples ______________________
obj = array([0]), method = 'repeat', args = (array([3], dtype=int64),)
kwds = {'axis': None}
bound = <built-in method repeat of numpy.ndarray object at 0xf04aab60>
def _wrapfunc(obj, method, *args, **kwds):
bound = getattr(obj, method, None)
if bound is None:
return _wrapit(obj, method, *args, **kwds)
try:
> return bound(*args, **kwds)
E TypeError: Cannot cast array data from dtype('int64') to dtype('int32') according to the rule 'safe'
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:57: TypeError
During handling of the above exception, another exception occurred:
self = <biom.tests.test_util.UtilTests testMethod=test_generate_subsamples>
def test_generate_subsamples(self):
table = Table(np.array([[3, 1, 1], [0, 3, 3]]), ['O1', 'O2'],
['S1', 'S2', 'S3'])
actual_o1 = set()
actual_o2 = set()
> for i, obs in zip(range(100), generate_subsamples(table, 3)):
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_util.py:51:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/util.py:83: in generate_subsamples
yield table.subsample(n, axis, by_id)
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/table.py:2990: in subsample
_subsample(data, n, with_replacement, rng)
biom/_subsample.pyx:64: in biom._subsample._subsample
???
<__array_function__ internals>:200: in repeat
???
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:479: in repeat
return _wrapfunc(a, 'repeat', repeats, axis=axis)
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:66: in _wrapfunc
return _wrapit(obj, method, *args, **kwds)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
obj = array([0]), method = 'repeat', args = (array([3], dtype=int64),)
kwds = {'axis': None}
wrap = <built-in method __array_wrap__ of numpy.ndarray object at 0xf04aab60>
def _wrapit(obj, method, *args, **kwds):
try:
wrap = obj.__array_wrap__
except AttributeError:
wrap = None
> result = getattr(asarray(obj), method)(*args, **kwds)
E TypeError: Cannot cast array data from dtype('int64') to dtype('int32') according to the rule 'safe'
/usr/lib/python3/dist-packages/numpy/core/fromnumeric.py:43: TypeError
=========================== short test summary info ============================
FAILED biom/tests/test_table.py::SparseTableTests::test_subsample - TypeError...
FAILED biom/tests/test_table.py::SparseTableTests::test_subsample_md_copy_bug
FAILED biom/tests/test_table.py::SparseTableTests::test_subsample_same_seed_without_replacement
FAILED biom/tests/test_table.py::SparseTableTests::test_subsample_without_replacement_unique_results
FAILED biom/tests/test_util.py::UtilTests::test_generate_subsamples - TypeErr...
=================== 5 failed, 365 passed, 6 skipped in 5.44s ===================
E: pybuild pybuild:395: test: plugin distutils failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build; python3.11 -m pytest
rm -fr -- /tmp/dh-xdg-rundir-Qk5JzfPC
dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.11 returned exit code 13
make: *** [debian/rules:19: binary-arch] Error 25
dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2023-12-03T06:25:33Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build Type: any
Build-Space: 108568
Build-Time: 22
Distribution: trixie-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 177
Job: python-biom-format_2.1.15.2-1
Machine Architecture: arm64
Package: python-biom-format
Package-Time: 210
Source-Version: 2.1.15.2-1
Space: 108568
Status: attempted
Version: 2.1.15.2-1
--------------------------------------------------------------------------------
Finished at 2023-12-03T06:25:33Z
Build needed 00:03:30, 108568k disk space