Raspbian Package Auto-Building

python-biom-format → 2.1.12-3+b1 → armhf → 2023-02-05 06:17:01

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-01

+==============================================================================+
| python-biom-format 2.1.12-3+b1 (armhf)       Sat, 04 Feb 2023 15:53:25 +0000 |
+==============================================================================+

Package: python-biom-format
Version: 2.1.12-3+b1
Source Version: 2.1.12-3
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bookworm-staging-armhf-sbuild-f651b7d2-b2bc-4643-8e91-b929ea18f643' with '<<CHROOT>>'

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| Update chroot                                                                |
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Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.7 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.4 MB]
Fetched 28.1 MB in 49s (568 kB/s)
Reading package lists...
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.

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| Fetch source files                                                           |
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Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'python-biom-format' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-biom-format.git
Please use:
git clone https://salsa.debian.org/med-team/python-biom-format.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 8567 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main python-biom-format 2.1.12-3 (dsc) [2452 B]
Get:2 http://172.17.4.1/private bookworm-staging/main python-biom-format 2.1.12-3 (tar) [8554 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main python-biom-format 2.1.12-3 (diff) [10.9 kB]
Fetched 8567 kB in 1s (10.2 MB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/python-biom-format-w4gogh/python-biom-format-2.1.12' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/python-biom-format-w4gogh' with '<<BUILDDIR>>'

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| Install build-essential                                                      |
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Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-vBHf03/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-vBHf03/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-vBHf03/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (1938 B/s)
Reading package lists...
W: copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libldap-common libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 92 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (22.8 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 13011 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov
Filtered Build-Depends: debhelper-compat (= 13), dh-python, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov
dpkg-deb: building package 'sbuild-build-depends-python-biom-format-dummy' in '/<<BUILDDIR>>/resolver-vBHf03/apt_archive/sbuild-build-depends-python-biom-format-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-python-biom-format-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Sources [604 B]
Get:5 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Packages [676 B]
Fetched 2613 B in 1s (2316 B/s)
Reading package lists...
W: copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...

Install python-biom-format build dependencies (apt-based resolver)
------------------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libldap-common libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bash-completion binutils
  binutils-arm-linux-gnueabihf binutils-common blt bsdextrautils
  ca-certificates cpp-12 cython3 debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism docutils-common dwz file fontconfig-config
  fonts-dejavu-core fonts-lyx g++-12 gcc-12 gcc-12-base gettext gettext-base
  groff-base help2man intltool-debian libaec0 libarchive-zip-perl libasan8
  libatomic1 libbinutils libblas3 libbrotli1 libbsd0 libcc1-0 libctf-nobfd0
  libctf0 libcurl4 libdebhelper-perl libdeflate0 libelf1 libexpat1
  libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6
  libfribidi0 libgcc-12-dev libgcc-s1 libgfortran5 libglib2.0-0 libgomp1
  libgraphite2-3 libharfbuzz0b libhdf5-103-1 libhdf5-hl-100 libicu72
  libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-hotkeys
  libjs-jquery-isonscreen libjs-jquery-metadata libjs-jquery-tablesorter
  libjs-jquery-throttle-debounce libjs-jquery-ui libjs-sphinxdoc
  libjs-underscore libjson-perl liblapack3 liblbfgsb0 liblcms2-2 liblerc4
  liblzf1 libmagic-mgc libmagic1 libmd0 libmpdec3 libnghttp2-14 libopenjp2-7
  libpipeline1 libpng16-16 libpsl5 libpython3-all-dev libpython3-dev
  libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libpython3.11
  libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libqhull-r8.0
  libraqm0 librtmp1 libssh2-1 libssl3 libstdc++-12-dev libstdc++6
  libsub-override-perl libsz2 libtcl8.6 libtiff6 libtk8.6 libtool libubsan1
  libuchardet0 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6
  libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxslt1.1 libxss1 m4
  man-db media-types openssl po-debconf python-babel-localedata
  python-matplotlib-data python3 python3-alabaster python3-all python3-all-dev
  python3-appdirs python3-attr python3-babel python3-brotli python3-certifi
  python3-chardet python3-charset-normalizer python3-click python3-colorama
  python3-contourpy python3-coverage python3-cycler python3-dateutil
  python3-decorator python3-dev python3-distutils python3-docutils
  python3-exceptiongroup python3-fonttools python3-fs python3-future
  python3-h5py python3-h5py-serial python3-idna python3-imagesize
  python3-iniconfig python3-jinja2 python3-kiwisolver python3-lib2to3
  python3-lxml python3-lz4 python3-markupsafe python3-matplotlib
  python3-minimal python3-more-itertools python3-mpmath python3-numpy
  python3-packaging python3-pandas python3-pandas-lib python3-pil
  python3-pil.imagetk python3-pkg-resources python3-pluggy python3-py
  python3-pygments python3-pyparsing python3-pytest python3-pytest-cov
  python3-requests python3-roman python3-scipy python3-setuptools python3-six
  python3-snowballstemmer python3-sphinx python3-sympy python3-tk
  python3-tomli python3-tz python3-ufolib2 python3-urllib3 python3.10
  python3.10-minimal python3.11 python3.11-dev python3.11-minimal
  sphinx-common tk8.6-blt2.5 unicode-data x11-common xml-core zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc binutils-doc blt-demo
  gcc-12-locales cpp-12-doc cython-doc dh-make flit python3-build
  python3-installer gcc-12-doc gettext-doc libasprintf-dev libgettextpo-dev
  groff low-memory-monitor libjs-jquery-ui-docs liblcms2-utils
  libstdc++-12-doc tcl8.6 tk8.6 libtool-doc gfortran | fortran95-compiler
  gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc
  python3-venv python-attr-doc python-coverage-doc python-cycler-doc
  docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french
  texlive-latex-base texlive-latex-recommended python-future-doc
  python-h5py-doc python-jinja2-doc python-lxml-doc cm-super-minimal dvipng
  ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3
  librsvg2-common python3-cairocffi python3-gi python3-gi-cairo
  python3-gobject python3-pyqt5 python3-sip python3-tornado
  texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2
  gfortran python-pandas-doc python3-statsmodels python-pil-doc subversion
  python-pygments-doc ttf-bitstream-vera python-pyparsing-doc
  python3-cryptography python3-openssl python3-socks python-requests-doc
  python-scipy-doc python-setuptools-doc python3-stemmer fonts-freefont-otf
  imagemagick-6.q16 latexmk libjs-mathjax python3-sphinx-rtd-theme sphinx-doc
  tex-gyre texlive-fonts-recommended texlive-plain-generic texlive-fonts-extra
  python-sympy-doc tix python3-tk-dbg python3.10-venv python3.10-doc
  binfmt-support python3.11-venv python3.11-doc
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
  xdg-user-dirs javascript-common libjson-xs-perl publicsuffix libltdl-dev
  libmail-sendmail-perl libpaper-utils python3-bs4 python3-html5lib
  python3-bottleneck python3-numexpr python3-odf python3-openpyxl
  python3-tables python3-olefile isympy-common
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bash-completion blt bsdextrautils
  ca-certificates cython3 debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism docutils-common dwz file fontconfig-config
  fonts-dejavu-core fonts-lyx gettext gettext-base groff-base help2man
  intltool-debian libaec0 libarchive-zip-perl libblas3 libbrotli1 libbsd0
  libcurl4 libdebhelper-perl libdeflate0 libelf1 libexpat1 libexpat1-dev
  libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
  libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libhdf5-103-1
  libhdf5-hl-100 libicu72 libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery
  libjs-jquery-hotkeys libjs-jquery-isonscreen libjs-jquery-metadata
  libjs-jquery-tablesorter libjs-jquery-throttle-debounce libjs-jquery-ui
  libjs-sphinxdoc libjs-underscore libjson-perl liblapack3 liblbfgsb0
  liblcms2-2 liblerc4 liblzf1 libmagic-mgc libmagic1 libmd0 libmpdec3
  libnghttp2-14 libopenjp2-7 libpipeline1 libpng16-16 libpsl5
  libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10-minimal
  libpython3.10-stdlib libpython3.11 libpython3.11-dev libpython3.11-minimal
  libpython3.11-stdlib libqhull-r8.0 libraqm0 librtmp1 libssh2-1
  libsub-override-perl libsz2 libtcl8.6 libtiff6 libtk8.6 libtool libuchardet0
  libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxcb1
  libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxslt1.1 libxss1 m4 man-db
  media-types openssl po-debconf python-babel-localedata
  python-matplotlib-data python3 python3-alabaster python3-all python3-all-dev
  python3-appdirs python3-attr python3-babel python3-brotli python3-certifi
  python3-chardet python3-charset-normalizer python3-click python3-colorama
  python3-contourpy python3-coverage python3-cycler python3-dateutil
  python3-decorator python3-dev python3-distutils python3-docutils
  python3-exceptiongroup python3-fonttools python3-fs python3-future
  python3-h5py python3-h5py-serial python3-idna python3-imagesize
  python3-iniconfig python3-jinja2 python3-kiwisolver python3-lib2to3
  python3-lxml python3-lz4 python3-markupsafe python3-matplotlib
  python3-minimal python3-more-itertools python3-mpmath python3-numpy
  python3-packaging python3-pandas python3-pandas-lib python3-pil
  python3-pil.imagetk python3-pkg-resources python3-pluggy python3-py
  python3-pygments python3-pyparsing python3-pytest python3-pytest-cov
  python3-requests python3-roman python3-scipy python3-setuptools python3-six
  python3-snowballstemmer python3-sphinx python3-sympy python3-tk
  python3-tomli python3-tz python3-ufolib2 python3-urllib3 python3.10
  python3.10-minimal python3.11 python3.11-dev python3.11-minimal
  sbuild-build-depends-python-biom-format-dummy sphinx-common tk8.6-blt2.5
  unicode-data x11-common xml-core zlib1g-dev
The following packages will be upgraded:
  binutils binutils-arm-linux-gnueabihf binutils-common cpp-12 g++-12 gcc-12
  gcc-12-base libasan8 libatomic1 libbinutils libcc1-0 libctf-nobfd0 libctf0
  libgcc-12-dev libgcc-s1 libgomp1 libssl3 libstdc++-12-dev libstdc++6
  libubsan1
20 upgraded, 192 newly installed, 0 to remove and 72 not upgraded.
Need to get 160 MB of archives.
After this operation, 531 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-vBHf03/apt_archive ./ sbuild-build-depends-python-biom-format-dummy 0.invalid.0 [968 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf libubsan1 armhf 12.2.0-14+rpi1 [861 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf gcc-12-base armhf 12.2.0-14+rpi1 [37.7 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf libstdc++6 armhf 12.2.0-14+rpi1 [504 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libgomp1 armhf 12.2.0-14+rpi1 [95.4 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libatomic1 armhf 12.2.0-14+rpi1 [8240 B]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libasan8 armhf 12.2.0-14+rpi1 [2088 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf cpp-12 armhf 12.2.0-14+rpi1 [7159 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libcc1-0 armhf 12.2.0-14+rpi1 [32.2 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf libctf0 armhf 2.39.90.20221231-1+rpi1 [71.5 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf libctf-nobfd0 armhf 2.39.90.20221231-1+rpi1 [133 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf binutils-arm-linux-gnueabihf armhf 2.39.90.20221231-1+rpi1 [2069 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf libbinutils armhf 2.39.90.20221231-1+rpi1 [407 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf binutils-common armhf 2.39.90.20221231-1+rpi1 [2354 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf binutils armhf 2.39.90.20221231-1+rpi1 [64.9 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf g++-12 armhf 12.2.0-14+rpi1 [7914 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf gcc-12 armhf 12.2.0-14+rpi1 [14.2 MB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libgcc-12-dev armhf 12.2.0-14+rpi1 [727 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libstdc++-12-dev armhf 12.2.0-14+rpi1 [2027 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf libgcc-s1 armhf 12.2.0-14+rpi1 [36.3 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf libssl3 armhf 3.0.7-2 [1614 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11-minimal armhf 3.11.1-2 [796 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf python3.11-minimal armhf 3.11.1-2 [1678 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.11.1-2 [25.7 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf media-types all 8.0.0 [33.4 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11-stdlib armhf 3.11.1-2 [1622 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf python3.11 armhf 3.11.1-2 [567 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.11.1-2 [8704 B]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.11.1-2 [25.4 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.9-1 [769 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.9-1 [1477 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-9 [774 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-4 [78.8 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.2-1 [1342 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf bash-completion all 1:2.11-6 [234 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf openssl armhf 3.0.7-2 [1349 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates all 20211016 [156 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.44-3 [95.3 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.44-3 [41.5 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-10 [156 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-2 [256 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-10 [495 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf libtcl8.6 armhf 8.6.13+dfsg-1 [906 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b3 [258 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libpng16-16 armhf 1.6.39-2 [258 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf libfreetype6 armhf 2.12.1+dfsg-4 [329 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf fontconfig-config armhf 2.14.1-3 [315 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libfontconfig1 armhf 2.14.1-3 [366 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf libmd0 armhf 1.0.4-2 [28.6 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf libbsd0 armhf 0.11.7-2 [112 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf libx11-data all 2:1.8.3-3 [292 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf libx11-6 armhf 2:1.8.3-3 [687 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf libxft2 armhf 2.3.6-1 [53.7 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf libtk8.6 armhf 8.6.13-1 [680 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-4.1 [477 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf blt armhf 2.5.3+dfsg-4.1 [14.9 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf cython3 armhf 0.29.32-2+b1 [1507 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.11.4 [81.2 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-5 [517 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:82 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:83 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:84 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:85 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:86 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1+b1 [571 kB]
Get:87 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-10 [1203 kB]
Get:88 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:89 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:90 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.11.4 [942 kB]
Get:91 http://172.17.4.1/private bookworm-staging/main armhf python3-lib2to3 all 3.10.8-1 [77.3 kB]
Get:92 http://172.17.4.1/private bookworm-staging/main armhf python3-distutils all 3.10.8-1 [139 kB]
Get:93 http://172.17.4.1/private bookworm-staging/main armhf dh-python all 5.20220819+rpi1 [114 kB]
Get:94 http://172.17.4.1/private bookworm-staging/main armhf xml-core all 0.18+nmu1 [23.8 kB]
Get:95 http://172.17.4.1/private bookworm-staging/main armhf docutils-common all 0.19+dfsg-6 [127 kB]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf fonts-lyx all 2.3.7-1 [186 kB]
Get:97 http://172.17.4.1/private bookworm-staging/main armhf help2man armhf 1.49.3 [198 kB]
Get:98 http://172.17.4.1/private bookworm-staging/main armhf libaec0 armhf 1.0.6-1 [19.3 kB]
Get:99 http://172.17.4.1/private bookworm-staging/main armhf libblas3 armhf 3.11.0-2 [100.0 kB]
Get:100 http://172.17.4.1/private bookworm-staging/main armhf libnghttp2-14 armhf 1.51.0-1 [60.5 kB]
Get:101 http://172.17.4.1/private bookworm-staging/main armhf libpsl5 armhf 0.21.0-1.2 [56.2 kB]
Get:102 http://172.17.4.1/private bookworm-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:103 http://172.17.4.1/private bookworm-staging/main armhf libssh2-1 armhf 1.10.0-3+b1 [161 kB]
Get:104 http://172.17.4.1/private bookworm-staging/main armhf libcurl4 armhf 7.87.0-2 [332 kB]
Get:105 http://172.17.4.1/private bookworm-staging/main armhf libdeflate0 armhf 1.14-1 [50.9 kB]
Get:106 http://172.17.4.1/private bookworm-staging/main armhf libexpat1-dev armhf 2.5.0-1 [130 kB]
Get:107 http://172.17.4.1/private bookworm-staging/main armhf libfribidi0 armhf 1.0.8-2.1 [63.7 kB]
Get:108 http://172.17.4.1/private bookworm-staging/main armhf libgfortran5 armhf 12.2.0-14+rpi1 [238 kB]
Get:109 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-0 armhf 2.74.5-1 [1204 kB]
Get:110 http://172.17.4.1/private bookworm-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:111 http://172.17.4.1/private bookworm-staging/main armhf libharfbuzz0b armhf 6.0.0-1 [1886 kB]
Get:112 http://172.17.4.1/private bookworm-staging/main armhf libsz2 armhf 1.0.6-1 [7452 B]
Get:113 http://172.17.4.1/private bookworm-staging/main armhf libhdf5-103-1 armhf 1.10.8+repack1-1 [1218 kB]
Get:114 http://172.17.4.1/private bookworm-staging/main armhf libhdf5-hl-100 armhf 1.10.8+repack1-1 [64.6 kB]
Get:115 http://172.17.4.1/private bookworm-staging/main armhf libimagequant0 armhf 2.17.0-1 [28.0 kB]
Get:116 http://172.17.4.1/private bookworm-staging/main armhf libjbig0 armhf 2.1-6.1 [27.0 kB]
Get:117 http://172.17.4.1/private bookworm-staging/main armhf libjpeg62-turbo armhf 1:2.1.2-1 [144 kB]
Get:118 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery-isonscreen all 1.2.0-1.1 [3196 B]
Get:119 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery-metadata all 12-4 [6532 B]
Get:120 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [184 kB]
Get:121 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.2 kB]
Get:122 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get:123 http://172.17.4.1/private bookworm-staging/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:124 http://172.17.4.1/private bookworm-staging/main armhf libjs-sphinxdoc all 5.3.0-3 [130 kB]
Get:125 http://172.17.4.1/private bookworm-staging/main armhf libjson-perl all 4.10000-1 [87.5 kB]
Get:126 http://172.17.4.1/private bookworm-staging/main armhf liblapack3 armhf 3.11.0-2 [1624 kB]
Get:127 http://172.17.4.1/private bookworm-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.3-11 [24.3 kB]
Get:128 http://172.17.4.1/private bookworm-staging/main armhf liblcms2-2 armhf 2.14-1+b1 [124 kB]
Get:129 http://172.17.4.1/private bookworm-staging/main armhf liblerc4 armhf 4.0.0+ds-2 [133 kB]
Get:130 http://172.17.4.1/private bookworm-staging/main armhf liblzf1 armhf 3.6-3 [9268 B]
Get:131 http://172.17.4.1/private bookworm-staging/main armhf libopenjp2-7 armhf 2.5.0-1+b1 [164 kB]
Get:132 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11 armhf 3.11.1-2 [1666 kB]
Get:133 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-1 [901 kB]
Get:134 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11-dev armhf 3.11.1-2 [3375 kB]
Get:135 http://172.17.4.1/private bookworm-staging/main armhf libpython3-dev armhf 3.11.1-2 [8936 B]
Get:136 http://172.17.4.1/private bookworm-staging/main armhf libpython3-all-dev armhf 3.11.1-2 [1068 B]
Get:137 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.9-1 [1597 kB]
Get:138 http://172.17.4.1/private bookworm-staging/main armhf libqhull-r8.0 armhf 2020.2-5 [221 kB]
Get:139 http://172.17.4.1/private bookworm-staging/main armhf libraqm0 armhf 0.7.0-4 [9388 B]
Get:140 http://172.17.4.1/private bookworm-staging/main armhf libwebp7 armhf 1.2.4-0.1 [242 kB]
Get:141 http://172.17.4.1/private bookworm-staging/main armhf libtiff6 armhf 4.5.0-4 [292 kB]
Get:142 http://172.17.4.1/private bookworm-staging/main armhf libwebpdemux2 armhf 1.2.4-0.1 [98.4 kB]
Get:143 http://172.17.4.1/private bookworm-staging/main armhf libwebpmux3 armhf 1.2.4-0.1 [106 kB]
Get:144 http://172.17.4.1/private bookworm-staging/main armhf libxslt1.1 armhf 1.1.35-1 [221 kB]
Get:145 http://172.17.4.1/private bookworm-staging/main armhf python-babel-localedata all 2.10.3-1 [5615 kB]
Get:146 http://172.17.4.1/private bookworm-staging/main armhf python-matplotlib-data all 3.6.3-1 [2744 kB]
Get:147 http://172.17.4.1/private bookworm-staging/main armhf python3-alabaster all 0.7.12-1 [20.8 kB]
Get:148 http://172.17.4.1/private bookworm-staging/main armhf python3-all armhf 3.11.1-2 [1064 B]
Get:149 http://172.17.4.1/private bookworm-staging/main armhf python3.11-dev armhf 3.11.1-2 [618 kB]
Get:150 http://172.17.4.1/private bookworm-staging/main armhf python3-dev armhf 3.11.1-2 [26.2 kB]
Get:151 http://172.17.4.1/private bookworm-staging/main armhf python3-all-dev armhf 3.11.1-2 [1064 B]
Get:152 http://172.17.4.1/private bookworm-staging/main armhf python3-appdirs all 1.4.4-3 [13.0 kB]
Get:153 http://172.17.4.1/private bookworm-staging/main armhf python3-attr all 22.2.0-1 [65.4 kB]
Get:154 http://172.17.4.1/private bookworm-staging/main armhf python3-pkg-resources all 65.6.3-1 [278 kB]
Get:155 http://172.17.4.1/private bookworm-staging/main armhf python3-tz all 2022.7.1-1 [32.1 kB]
Get:156 http://172.17.4.1/private bookworm-staging/main armhf python3-babel all 2.10.3-1 [103 kB]
Get:157 http://172.17.4.1/private bookworm-staging/main armhf python3-brotli armhf 1.0.9-2+b3 [278 kB]
Get:158 http://172.17.4.1/private bookworm-staging/main armhf python3-certifi all 2022.9.24-1 [153 kB]
Get:159 http://172.17.4.1/private bookworm-staging/main armhf python3-chardet all 5.1.0+dfsg-2 [110 kB]
Get:160 http://172.17.4.1/private bookworm-staging/main armhf python3-charset-normalizer all 3.0.1-2 [49.3 kB]
Get:161 http://172.17.4.1/private bookworm-staging/main armhf python3-colorama all 0.4.6-2 [36.8 kB]
Get:162 http://172.17.4.1/private bookworm-staging/main armhf python3-click all 8.1.3-2 [92.2 kB]
Get:163 http://172.17.4.1/private bookworm-staging/main armhf python3.10 armhf 3.10.9-1 [509 kB]
Get:164 http://172.17.4.1/private bookworm-staging/main armhf python3-numpy armhf 1:1.24.1-2 [5318 kB]
Get:165 http://172.17.4.1/private bookworm-staging/main armhf python3-contourpy armhf 1.0.6-2+rpi1 [159 kB]
Get:166 http://172.17.4.1/private bookworm-staging/main armhf python3-coverage armhf 6.5.0+dfsg1-2+rpi1 [152 kB]
Get:167 http://172.17.4.1/private bookworm-staging/main armhf python3-cycler all 0.11.0-1 [8020 B]
Get:168 http://172.17.4.1/private bookworm-staging/main armhf python3-six all 1.16.0-4 [17.5 kB]
Get:169 http://172.17.4.1/private bookworm-staging/main armhf python3-dateutil all 2.8.2-1 [78.2 kB]
Get:170 http://172.17.4.1/private bookworm-staging/main armhf python3-decorator all 5.1.1-3 [14.9 kB]
Get:171 http://172.17.4.1/private bookworm-staging/main armhf python3-roman all 3.3-3 [9880 B]
Get:172 http://172.17.4.1/private bookworm-staging/main armhf python3-docutils all 0.19+dfsg-6 [382 kB]
Get:173 http://172.17.4.1/private bookworm-staging/main armhf python3-exceptiongroup all 1.1.0-1 [17.4 kB]
Get:174 http://172.17.4.1/private bookworm-staging/main armhf python3-scipy armhf 1.8.1-22+rpi1 [12.9 MB]
Get:175 http://172.17.4.1/private bookworm-staging/main armhf python3-ufolib2 all 0.14.0+dfsg1-1 [34.3 kB]
Get:176 http://172.17.4.1/private bookworm-staging/main armhf python3-mpmath all 1.2.1-2 [418 kB]
Get:177 http://172.17.4.1/private bookworm-staging/main armhf python3-sympy all 1.11.1-1 [4358 kB]
Get:178 http://172.17.4.1/private bookworm-staging/main armhf python3-fs all 2.4.16-2 [95.2 kB]
Get:179 http://172.17.4.1/private bookworm-staging/main armhf python3-lxml armhf 4.9.2-1 [1528 kB]
Get:180 http://172.17.4.1/private bookworm-staging/main armhf python3-lz4 armhf 4.0.2+dfsg-1+b1 [23.9 kB]
Get:181 http://172.17.4.1/private bookworm-staging/main armhf unicode-data all 15.0.0-1 [7984 kB]
Get:182 http://172.17.4.1/private bookworm-staging/main armhf python3-fonttools armhf 4.38.0-1 [1047 kB]
Get:183 http://172.17.4.1/private bookworm-staging/main armhf python3-future all 0.18.2-6 [348 kB]
Get:184 http://172.17.4.1/private bookworm-staging/main armhf python3-h5py-serial armhf 3.7.0-3+b1 [1076 kB]
Get:185 http://172.17.4.1/private bookworm-staging/main armhf python3-h5py all 3.7.0-3 [9900 B]
Get:186 http://172.17.4.1/private bookworm-staging/main armhf python3-idna all 3.3-1 [39.4 kB]
Get:187 http://172.17.4.1/private bookworm-staging/main armhf python3-imagesize all 1.4.1-1 [6688 B]
Get:188 http://172.17.4.1/private bookworm-staging/main armhf python3-iniconfig all 1.1.1-2 [6396 B]
Get:189 http://172.17.4.1/private bookworm-staging/main armhf python3-markupsafe armhf 2.1.2-1 [13.4 kB]
Get:190 http://172.17.4.1/private bookworm-staging/main armhf python3-jinja2 all 3.0.3-2 [121 kB]
Get:191 http://172.17.4.1/private bookworm-staging/main armhf python3-kiwisolver armhf 1.4.4-1 [52.3 kB]
Get:192 http://172.17.4.1/private bookworm-staging/main armhf python3-pil armhf 9.4.0-1.1 [436 kB]
Get:193 http://172.17.4.1/private bookworm-staging/main armhf python3-tk armhf 3.10.8-1 [101 kB]
Get:194 http://172.17.4.1/private bookworm-staging/main armhf python3-pil.imagetk armhf 9.4.0-1.1 [73.9 kB]
Get:195 http://172.17.4.1/private bookworm-staging/main armhf python3-pyparsing all 3.0.9-1 [138 kB]
Get:196 http://172.17.4.1/private bookworm-staging/main armhf python3-packaging all 23.0-1 [32.5 kB]
Get:197 http://172.17.4.1/private bookworm-staging/main armhf python3-matplotlib armhf 3.6.3-1 [7453 kB]
Get:198 http://172.17.4.1/private bookworm-staging/main armhf python3-more-itertools all 8.10.0-2 [53.0 kB]
Get:199 http://172.17.4.1/private bookworm-staging/main armhf python3-pandas-lib armhf 1.5.3+dfsg-1+rpi1 [2991 kB]
Get:200 http://172.17.4.1/private bookworm-staging/main armhf python3-pandas all 1.5.3+dfsg-1+rpi1 [2871 kB]
Get:201 http://172.17.4.1/private bookworm-staging/main armhf python3-pluggy all 1.0.0+repack-1 [19.7 kB]
Get:202 http://172.17.4.1/private bookworm-staging/main armhf python3-py all 1.11.0-1 [89.2 kB]
Get:203 http://172.17.4.1/private bookworm-staging/main armhf python3-pygments all 2.14.0+dfsg-1 [783 kB]
Get:204 http://172.17.4.1/private bookworm-staging/main armhf python3-tomli all 2.0.1-2 [17.9 kB]
Get:205 http://172.17.4.1/private bookworm-staging/main armhf python3-pytest all 7.2.1-1 [233 kB]
Get:206 http://172.17.4.1/private bookworm-staging/main armhf python3-pytest-cov all 4.0.0-1 [26.1 kB]
Get:207 http://172.17.4.1/private bookworm-staging/main armhf python3-urllib3 all 1.26.12-1 [117 kB]
Get:208 http://172.17.4.1/private bookworm-staging/main armhf python3-requests all 2.28.1+dfsg-1 [67.9 kB]
Get:209 http://172.17.4.1/private bookworm-staging/main armhf python3-setuptools all 65.6.3-1 [520 kB]
Get:210 http://172.17.4.1/private bookworm-staging/main armhf python3-snowballstemmer all 2.2.0-2 [57.8 kB]
Get:211 http://172.17.4.1/private bookworm-staging/main armhf sphinx-common all 5.3.0-3 [652 kB]
Get:212 http://172.17.4.1/private bookworm-staging/main armhf python3-sphinx all 5.3.0-3 [549 kB]
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invoke-rc.d: could not determine current runlevel
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Setting up libcc1-0:armhf (12.2.0-14+rpi1) ...
Setting up libsz2:armhf (1.0.6-1) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Setting up libctf0:armhf (2.39.90.20221231-1+rpi1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libxcb1:armhf (1.15-1) ...
Setting up gettext (0.21-10) ...
Setting up libtool (2.4.7-5) ...
Setting up fontconfig-config (2.14.1-3) ...
Setting up libwebpdemux2:armhf (1.2.4-0.1) ...
Setting up libpython3.11-stdlib:armhf (3.11.1-2) ...
Setting up python3.10-minimal (3.10.9-1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up libpython3.10-stdlib:armhf (3.10.9-1) ...
Setting up dh-autoreconf (20) ...
Setting up ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
127 added, 0 removed; done.
Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
Setting up libfreetype6:armhf (2.12.1+dfsg-4) ...
Setting up libjs-jquery-metadata (12-4) ...
Setting up libgcc-12-dev:armhf (12.2.0-14+rpi1) ...
Setting up libjs-jquery-isonscreen (1.2.0-1.1) ...
Setting up libjs-sphinxdoc (5.3.0-3) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up dwz (0.15-1) ...
Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ...
Setting up groff-base (1.22.4-9) ...
Setting up libxslt1.1:armhf (1.1.35-1) ...
Setting up libcurl4:armhf (7.87.0-2) ...
Setting up libx11-6:armhf (2:1.8.3-3) ...
Setting up libharfbuzz0b:armhf (6.0.0-1) ...
Setting up binutils-arm-linux-gnueabihf (2.39.90.20221231-1+rpi1) ...
Setting up libpython3-stdlib:armhf (3.11.1-2) ...
Setting up liblbfgsb0:armhf (3.0+dfsg.3-11) ...
Setting up python3.11 (3.11.1-2) ...
Setting up python3.10 (3.10.9-1) ...
Setting up libpython3.11:armhf (3.11.1-2) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up libstdc++-12-dev:armhf (12.2.0-14+rpi1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up python3 (3.11.1-2) ...
Setting up binutils (2.39.90.20221231-1+rpi1) ...
Setting up man-db (2.11.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-markupsafe (2.1.2-1) ...
Setting up python3-tz (2022.7.1-1) ...
Setting up python3-six (1.16.0-4) ...
Setting up python3-roman (3.3-3) ...
Setting up python3-decorator (5.1.1-3) ...
Setting up python3-jinja2 (3.0.3-2) ...
Setting up python3-packaging (23.0-1) ...
Setting up python3-pyparsing (3.0.9-1) ...
Setting up python3-certifi (2022.9.24-1) ...
Setting up gcc-12 (12.2.0-14+rpi1) ...
Setting up python3-snowballstemmer (2.2.0-2) ...
Setting up libpython3.11-dev:armhf (3.11.1-2) ...
Setting up python3-brotli (1.0.9-2+b3) ...
Setting up libraqm0:armhf (0.7.0-4) ...
Setting up sphinx-common (5.3.0-3) ...
Setting up python3-cycler (0.11.0-1) ...
Setting up python3-kiwisolver (1.4.4-1) ...
Setting up python3-idna (3.3-1) ...
Setting up cython3 (0.29.32-2+b1) ...
Setting up python3-urllib3 (1.26.12-1) ...
Setting up python3-pluggy (1.0.0+repack-1) ...
Setting up libhdf5-103-1:armhf (1.10.8+repack1-1) ...
Setting up python3-lxml:armhf (4.9.2-1) ...
Setting up python3-exceptiongroup (1.1.0-1) ...
Setting up python3-dateutil (2.8.2-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up python3-mpmath (1.2.1-2) ...
Setting up python3-lib2to3 (3.10.8-1) ...
Setting up python3-appdirs (1.4.4-3) ...
Setting up python3-imagesize (1.4.1-1) ...
Setting up libhdf5-hl-100:armhf (1.10.8+repack1-1) ...
Setting up g++-12 (12.2.0-14+rpi1) ...
Setting up python3-pkg-resources (65.6.3-1) ...
Setting up python3-distutils (3.10.8-1) ...
Setting up dh-python (5.20220819+rpi1) ...
Setting up python3-more-itertools (8.10.0-2) ...
Setting up python3-iniconfig (1.1.1-2) ...
Setting up python3-sympy (1.11.1-1) ...
Setting up python3-attr (22.2.0-1) ...
Setting up libpython3-dev:armhf (3.11.1-2) ...
Setting up python3-setuptools (65.6.3-1) ...
Setting up python3-tomli (2.0.1-2) ...
Setting up python3-py (1.11.0-1) ...
Setting up python3-babel (2.10.3-1) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python3-colorama (0.4.6-2) ...
Setting up python3-lz4 (4.0.2+dfsg-1+b1) ...
Setting up python3.11-dev (3.11.1-2) ...
Setting up python3-charset-normalizer (3.0.1-2) ...
Setting up python3-pytest (7.2.1-1) ...
Setting up python3-alabaster (0.7.12-1) ...
Setting up python3-all (3.11.1-2) ...
Setting up python3-coverage (6.5.0+dfsg1-2+rpi1) ...
Setting up debhelper (13.11.4) ...
Setting up python3-pytest-cov (4.0.0-1) ...
Setting up python3-click (8.1.3-2) ...
Setting up python3-fs (2.4.16-2) ...
Setting up python3-pygments (2.14.0+dfsg-1) ...
Setting up python3-chardet (5.1.0+dfsg-2) ...
Setting up libpython3-all-dev:armhf (3.11.1-2) ...
Setting up python3-dev (3.11.1-2) ...
Setting up python3-requests (2.28.1+dfsg-1) ...
Setting up python3-numpy (1:1.24.1-2) ...
Setting up python3-contourpy (1.0.6-2+rpi1) ...
Setting up python3-future (0.18.2-6) ...
update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode
update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode
Setting up python3-all-dev (3.11.1-2) ...
Setting up python3-scipy (1.8.1-22+rpi1) ...
Setting up python3-pandas-lib:armhf (1.5.3+dfsg-1+rpi1) ...
Setting up python3-h5py-serial (3.7.0-3+b1) ...
Setting up python3-pandas (1.5.3+dfsg-1+rpi1) ...
Setting up python3-h5py (3.7.0-3) ...
Setting up python3-fonttools (4.38.0-1) ...
Setting up python3-ufolib2 (0.14.0+dfsg1-1) ...
Processing triggers for sgml-base (1.31) ...
Setting up libfontconfig1:armhf (2.14.1-3) ...
Setting up libxft2:armhf (2.3.6-1) ...
Setting up libtk8.6:armhf (8.6.13-1) ...
Processing triggers for libc-bin (2.36-6+rpi1) ...
Setting up docutils-common (0.19+dfsg-6) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ...
Setting up blt (2.5.3+dfsg-4.1) ...
Setting up python3-tk:armhf (3.10.8-1) ...
Setting up python3-pil.imagetk:armhf (9.4.0-1.1) ...
Setting up python3-pil:armhf (9.4.0-1.1) ...
Setting up python3-matplotlib (3.6.3-1) ...
Processing triggers for sgml-base (1.31) ...
Setting up python3-docutils (0.19+dfsg-6) ...
Setting up python3-sphinx (5.3.0-3) ...
Setting up sbuild-build-depends-python-biom-format-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for libc-bin (2.36-6+rpi1) ...

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.39.90.20221231-1+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-14+rpi1 gcc-12_12.2.0-14+rpi1 libc6-dev_2.36-6+rpi1 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 linux-libc-dev_6.0.12-1+rpi1
Package versions: adduser_3.129 apt_2.5.4 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2-2 bash-completion_1:2.11-6 binutils_2.39.90.20221231-1+rpi1 binutils-arm-linux-gnueabihf_2.39.90.20221231-1+rpi1 binutils-common_2.39.90.20221231-1+rpi1 blt_2.5.3+dfsg-4.1 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20211016 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-14+rpi1 cython3_0.29.32-2+b1 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.80 debhelper_13.11.4 debianutils_5.7-0.4 dh-autoreconf_20 dh-python_5.20220819+rpi1 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-1 dirmngr_2.2.40-1 docutils-common_0.19+dfsg-6 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.15-1 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 file_1:5.44-3 findutils_4.9.0-3 fontconfig-config_2.14.1-3 fonts-dejavu-core_2.37-2 fonts-lyx_2.3.7-1 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-14+rpi1 gcc_4:12.2.0-1+rpi1 gcc-10-base_10.4.0-5+rpi1 gcc-12_12.2.0-14+rpi1 gcc-12-base_12.2.0-14+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-10 gettext-base_0.21-10 gnupg_2.2.40-1 gnupg-l10n_2.2.40-1 gnupg-utils_2.2.40-1 gpg_2.2.40-1 gpg-agent_2.2.40-1 gpg-wks-client_2.2.40-1 gpg-wks-server_2.2.40-1 gpgconf_2.2.40-1 gpgsm_2.2.40-1 gpgv_2.2.40-1 grep_3.8-3 groff-base_1.22.4-9 gzip_1.12-1 help2man_1.49.3 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20221126-1 krb5-locales_1.20.1-1 libacl1_2.3.1-2 libaec0_1.0.6-1 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libasan8_12.2.0-14+rpi1 libassuan0_2.5.5-5 libatomic1_12.2.0-14+rpi1 libattr1_1:2.5.1-3 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1 libbinutils_2.39.90.20221231-1+rpi1 libblas3_3.11.0-2 libblkid1_2.38.1-4 libbrotli1_1.0.9-2+b3 libbsd0_0.11.7-2 libbz2-1.0_1.0.8-5+b2 libc-bin_2.36-6+rpi1 libc-dev-bin_2.36-6+rpi1 libc6_2.36-6+rpi1 libc6-dev_2.36-6+rpi1 libcap-ng0_0.8.3-1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_12.2.0-14+rpi1 libcom-err2_1.46.6~rc1-1 libcrypt-dev_1:4.4.33-1 libcrypt1_1:4.4.33-1 libctf-nobfd0_2.39.90.20221231-1+rpi1 libctf0_2.39.90.20221231-1+rpi1 libcurl4_7.87.0-2 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.265 libdebhelper-perl_13.11.4 libdeflate0_1.14-1 libdpkg-perl_1.21.9+rpi1 libelf1_0.187-2+rpi2 libexpat1_2.5.0-1 libexpat1-dev_2.5.0-1 libext2fs2_1.46.6~rc1-1 libfakeroot_1.29-1 libffi8_3.4.4-1 libfile-stripnondeterminism-perl_1.13.1-1 libfontconfig1_2.14.1-3 libfreetype6_2.12.1+dfsg-4 libfribidi0_1.0.8-2.1 libgcc-12-dev_12.2.0-14+rpi1 libgcc-s1_12.2.0-14+rpi1 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgfortran5_12.2.0-14+rpi1 libglib2.0-0_2.74.5-1 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-4 libgomp1_12.2.0-14+rpi1 libgpg-error0_1.46-1 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.20.1-1 libharfbuzz0b_6.0.0-1 libhdf5-103-1_1.10.8+repack1-1 libhdf5-hl-100_1.10.8+repack1-1 libhogweed6_3.8.1-2 libicu72_72.1-3 libidn2-0_2.3.3-1 libimagequant0_2.17.0-1 libisl23_0.25-1 libjansson4_2.14-2 libjbig0_2.1-6.1 libjpeg62-turbo_1:2.1.2-1 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1 libjs-jquery-isonscreen_1.2.0-1.1 libjs-jquery-metadata_12-4 libjs-jquery-tablesorter_1:2.31.3+dfsg1-3 libjs-jquery-throttle-debounce_1.1+dfsg.1-2 libjs-jquery-ui_1.13.2+dfsg-1 libjs-sphinxdoc_5.3.0-3 libjs-underscore_1.13.4~dfsg+~1.11.4-3 libjson-perl_4.10000-1 libk5crypto3_1.20.1-1 libkeyutils1_1.6.3-1 libkrb5-3_1.20.1-1 libkrb5support0_1.20.1-1 libksba8_1.6.2-4 liblapack3_3.11.0-2 liblbfgsb0_3.0+dfsg.3-11 liblcms2-2_2.14-1+b1 libldap-2.4-2_2.4.59+dfsg-1 libldap-2.5-0_2.5.13+dfsg-2+rpi1+b1 libldap-common_2.5.13+dfsg-2+rpi1 liblerc4_4.0.0+ds-2 liblocale-gettext-perl_1.07-5 liblz4-1_1.9.4-1+rpi1 liblzf1_3.6-3 liblzma5_5.4.0-0.1 libmagic-mgc_1:5.44-3 libmagic1_1:5.44-3 libmd0_1.0.4-2 libmount1_2.38.1-4 libmpc3_1.2.1-2 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnghttp2-14_1.51.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libopenjp2-7_2.5.0-1+b1 libp11-kit0_0.24.1-1 libpam-cap_1:2.44-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam0g_1.5.2-5 libpcre2-8-0_10.40-3 libpcre3_2:8.39-14 libperl5.36_5.36.0-6 libpipeline1_1.5.7-1 libpng16-16_1.6.39-2 libpsl5_0.21.0-1.2 libpython3-all-dev_3.11.1-2 libpython3-dev_3.11.1-2 libpython3-stdlib_3.11.1-2 libpython3.10-minimal_3.10.9-1 libpython3.10-stdlib_3.10.9-1 libpython3.11_3.11.1-2 libpython3.11-dev_3.11.1-2 libpython3.11-minimal_3.11.1-2 libpython3.11-stdlib_3.11.1-2 libqhull-r8.0_2020.2-5 libraqm0_0.7.0-4 libreadline8_8.2-1.2 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg-10 libsasl2-modules-db_2.1.28+dfsg-10 libseccomp2_2.5.4-1+rpi1 libselinux1_3.4-1 libsemanage-common_3.4-1 libsemanage2_3.4-1 libsepol2_3.4-2 libsmartcols1_2.38.1-4 libsqlite3-0_3.40.0-1 libss2_1.46.6~rc1-1 libssh2-1_1.10.0-3+b1 libssl1.1_1.1.1o-1 libssl3_3.0.7-2 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 libsub-override-perl_0.09-4 libsystemd0_252.2-1+rpi1 libsz2_1.0.6-1 libtasn1-6_4.19.0-2 libtcl8.6_8.6.13+dfsg-1 libtext-charwidth-perl_0.04-11 libtext-iconv-perl_1.7-8 libtiff6_4.5.0-4 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtk8.6_8.6.13-1 libtool_2.4.7-5 libubsan1_12.2.0-14+rpi1 libuchardet0_0.0.7-1 libudev1_252.2-1+rpi1 libunistring2_1.0-2 libuuid1_2.38.1-4 libwebp7_1.2.4-0.1 libwebpdemux2_1.2.4-0.1 libwebpmux3_1.2.4-0.1 libx11-6_2:1.8.3-3 libx11-data_2:1.8.3-3 libxau6_1:1.0.9-1 libxcb1_1.15-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxft2_2.3.6-1 libxml2_2.9.14+dfsg-1.1+b1 libxrender1_1:0.9.10-1.1 libxslt1.1_1.1.35-1 libxss1_1:1.2.3-1 libxxhash0_0.8.1-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_6.0.12-1+rpi1 login_1:4.13+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-2 make_4.3-4.1 man-db_2.11.2-1 mawk_1.3.4.20200120-3.1 media-types_8.0.0 mount_2.38.1-4 nano_7.1-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.4 openssl_3.0.7-2 passwd_1:4.13+dfsg1-1 patch_2.7.6-7 perl_5.36.0-6 perl-base_5.36.0-6 perl-modules-5.36_5.36.0-6 pinentry-curses_1.2.1-1 po-debconf_1.0.21+nmu1 python-babel-localedata_2.10.3-1 python-matplotlib-data_3.6.3-1 python3_3.11.1-2 python3-alabaster_0.7.12-1 python3-all_3.11.1-2 python3-all-dev_3.11.1-2 python3-appdirs_1.4.4-3 python3-attr_22.2.0-1 python3-babel_2.10.3-1 python3-brotli_1.0.9-2+b3 python3-certifi_2022.9.24-1 python3-chardet_5.1.0+dfsg-2 python3-charset-normalizer_3.0.1-2 python3-click_8.1.3-2 python3-colorama_0.4.6-2 python3-contourpy_1.0.6-2+rpi1 python3-coverage_6.5.0+dfsg1-2+rpi1 python3-cycler_0.11.0-1 python3-dateutil_2.8.2-1 python3-decorator_5.1.1-3 python3-dev_3.11.1-2 python3-distutils_3.10.8-1 python3-docutils_0.19+dfsg-6 python3-exceptiongroup_1.1.0-1 python3-fonttools_4.38.0-1 python3-fs_2.4.16-2 python3-future_0.18.2-6 python3-h5py_3.7.0-3 python3-h5py-serial_3.7.0-3+b1 python3-idna_3.3-1 python3-imagesize_1.4.1-1 python3-iniconfig_1.1.1-2 python3-jinja2_3.0.3-2 python3-kiwisolver_1.4.4-1 python3-lib2to3_3.10.8-1 python3-lxml_4.9.2-1 python3-lz4_4.0.2+dfsg-1+b1 python3-markupsafe_2.1.2-1 python3-matplotlib_3.6.3-1 python3-minimal_3.11.1-2 python3-more-itertools_8.10.0-2 python3-mpmath_1.2.1-2 python3-numpy_1:1.24.1-2 python3-packaging_23.0-1 python3-pandas_1.5.3+dfsg-1+rpi1 python3-pandas-lib_1.5.3+dfsg-1+rpi1 python3-pil_9.4.0-1.1 python3-pil.imagetk_9.4.0-1.1 python3-pkg-resources_65.6.3-1 python3-pluggy_1.0.0+repack-1 python3-py_1.11.0-1 python3-pygments_2.14.0+dfsg-1 python3-pyparsing_3.0.9-1 python3-pytest_7.2.1-1 python3-pytest-cov_4.0.0-1 python3-requests_2.28.1+dfsg-1 python3-roman_3.3-3 python3-scipy_1.8.1-22+rpi1 python3-setuptools_65.6.3-1 python3-six_1.16.0-4 python3-snowballstemmer_2.2.0-2 python3-sphinx_5.3.0-3 python3-sympy_1.11.1-1 python3-tk_3.10.8-1 python3-tomli_2.0.1-2 python3-tz_2022.7.1-1 python3-ufolib2_0.14.0+dfsg1-1 python3-urllib3_1.26.12-1 python3.10_3.10.9-1 python3.10-minimal_3.10.9-1 python3.11_3.11.1-2 python3.11-dev_3.11.1-2 python3.11-minimal_3.11.1-2 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.2 rpcsvc-proto_1.4.3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-biom-format-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 sphinx-common_5.3.0-3 sysvinit-utils_3.05-7 tar_1.34+dfsg-1 tk8.6-blt2.5_2.5.3+dfsg-4.1 tzdata_2022f-1 unicode-data_15.0.0-1 util-linux_2.38.1-4 util-linux-extra_2.38.1-4 x11-common_1:7.7+23 xml-core_0.18+nmu1 xz-utils_5.4.0-0.1 zlib1g_1:1.2.13.dfsg-1 zlib1g-dev_1:1.2.13.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.0XYoXIhX/trustedkeys.kbx': General error
gpgv: Signature made Sat Dec  3 19:19:18 2022 UTC
gpgv:                using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv:                issuer "emollier@emlwks999.eu"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./python-biom-format_2.1.12-3.dsc
dpkg-source: info: extracting python-biom-format in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking python-biom-format_2.1.12.orig.tar.xz
dpkg-source: info: unpacking python-biom-format_2.1.12-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying ignore_local_dist-packages.patch
dpkg-source: info: applying no-web-adds.patch
dpkg-source: info: applying fix_future_import.patch
dpkg-source: info: applying enable_sloppy_sphinx_build.patch
dpkg-source: info: applying sphinx_1.6.patch
dpkg-source: info: applying sphinx.ext.pngmath.patch
dpkg-source: info: applying posix_shell.patch

Check disc space
----------------

Sufficient free space for build

Hack binNMU version
-------------------

Created changelog entry for binNMU version 2.1.12-3+b1

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-f651b7d2-b2bc-4643-8e91-b929ea18f643
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package python-biom-format
dpkg-buildpackage: info: source version 2.1.12-3+b1
dpkg-buildpackage: info: source distribution bookworm-staging
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --with python3,bash-completion,sphinxdoc --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
	pybuild --clean -i python{version} -p 3.11
I: pybuild base:240: python3.11 setup.py clean 
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_filter.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_subsample.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_transform.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
Compiling biom/_filter.pyx because it changed.
Compiling biom/_transform.pyx because it changed.
Compiling biom/_subsample.pyx because it changed.
[1/3] Cythonizing biom/_filter.pyx
[2/3] Cythonizing biom/_subsample.pyx
[3/3] Cythonizing biom/_transform.pyx
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.11' does not exist -- can't clean it
	rm -rf .pybuild/
	find . -name \*.pyc -exec rm {} \;
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
	rm -f debian/debhelper-build-stamp
	rm -rf debian/.debhelper/
	rm -f -- debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars ./biom/_filter.c ./biom/_subsample.c ./biom/_transform.c debian/files
	rm -fr -- debian/python3-biom-format/ debian/tmp/ debian/python-biom-format-doc/
	find .  \( \( \
		\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} + \) -o \
		\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
 debian/rules binary-arch
dh binary-arch --with python3,bash-completion,sphinxdoc --buildsystem=pybuild
   dh_update_autotools_config -a -O--buildsystem=pybuild
   dh_autoreconf -a -O--buildsystem=pybuild
   dh_auto_configure -a -O--buildsystem=pybuild
	pybuild --configure -i python{version} -p 3.11
I: pybuild base:240: python3.11 setup.py config 
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_filter.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_subsample.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/biom/_transform.pyx
  tree = Parsing.p_module(s, pxd, full_module_name)
Compiling biom/_filter.pyx because it changed.
Compiling biom/_transform.pyx because it changed.
Compiling biom/_subsample.pyx because it changed.
[1/3] Cythonizing biom/_filter.pyx
[2/3] Cythonizing biom/_subsample.pyx
[3/3] Cythonizing biom/_transform.pyx
running config
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# arch
USE_CYTHON=true dh_auto_build
	pybuild --build -i python{version} -p 3.11
I: pybuild base:240: /usr/bin/python3 setup.py build 
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/err.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/exception.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/parse.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/test_err.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/test_util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/long_lines.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/test_parse.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
copying biom/tests/test_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_subsetter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_ids.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_summarizer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/installation_informer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_converter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/metadata_exporter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/metadata_adder.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_validator.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_head.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/table_normalizer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
copying biom/cli/uc_processor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_add_metadata.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_converter.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_uc_processor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_summarize_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_subset_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_validate_table.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_table_normalizer.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
copying biom/tests/test_cli/test_show_install_info.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli
running egg_info
creating biom_format.egg-info
writing biom_format.egg-info/PKG-INFO
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing entry points to biom_format.egg-info/entry_points.txt
writing requirements to biom_format.egg-info/requires.txt
writing top-level names to biom_format.egg-info/top_level.txt
writing manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no directories found matching 'support_files'
warning: no directories found matching 'tests/test_data'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
adding license file 'COPYING.txt'
writing manifest file 'biom_format.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'biom.assets' as data is deprecated, please list it in `packages`.
    !!


    ############################
    # Package would be ignored #
    ############################
    Python recognizes 'biom.assets' as an importable package,
    but it is not listed in the `packages` configuration of setuptools.

    'biom.assets' has been automatically added to the distribution only
    because it may contain data files, but this behavior is likely to change
    in future versions of setuptools (and therefore is considered deprecated).

    Please make sure that 'biom.assets' is included as a package by using
    the `packages` configuration field or the proper discovery methods
    (for example by using `find_namespace_packages(...)`/`find_namespace:`
    instead of `find_packages(...)`/`find:`).

    You can read more about "package discovery" and "data files" on setuptools
    documentation page.


!!

  check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'biom.tests.bench_tables' as data is deprecated, please list it in `packages`.
    !!


    ############################
    # Package would be ignored #
    ############################
    Python recognizes 'biom.tests.bench_tables' as an importable package,
    but it is not listed in the `packages` configuration of setuptools.

    'biom.tests.bench_tables' has been automatically added to the distribution only
    because it may contain data files, but this behavior is likely to change
    in future versions of setuptools (and therefore is considered deprecated).

    Please make sure that 'biom.tests.bench_tables' is included as a package by using
    the `packages` configuration field or the proper discovery methods
    (for example by using `find_namespace_packages(...)`/`find_namespace:`
    instead of `find_packages(...)`/`find:`).

    You can read more about "package discovery" and "data files" on setuptools
    documentation page.


!!

  check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'biom.tests.test_cli.test_data' as data is deprecated, please list it in `packages`.
    !!


    ############################
    # Package would be ignored #
    ############################
    Python recognizes 'biom.tests.test_cli.test_data' as an importable package,
    but it is not listed in the `packages` configuration of setuptools.

    'biom.tests.test_cli.test_data' has been automatically added to the distribution only
    because it may contain data files, but this behavior is likely to change
    in future versions of setuptools (and therefore is considered deprecated).

    Please make sure that 'biom.tests.test_cli.test_data' is included as a package by using
    the `packages` configuration field or the proper discovery methods
    (for example by using `find_namespace_packages(...)`/`find_namespace:`
    instead of `find_packages(...)`/`find:`).

    You can read more about "package discovery" and "data files" on setuptools
    documentation page.


!!

  check.warn(importable)
copying biom/_filter.pyx -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/_subsample.pyx -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
copying biom/_transform.pyx -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/assets
copying biom/assets/exercise_api.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/assets
copying biom/assets/exercise_cli.sh -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/assets
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables
copying biom/tests/test_data/bad_table.txt -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/bad_table.txt.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/empty.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/no-contents.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
copying biom/tests/test_data/test.json.gz -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.biom -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data
copying biom/tests/test_cli/test_data/test.json -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data
running build_ext
building 'biom._filter' extension
creating build
creating build/temp.linux-armhf-cpython-311
creating build/temp.linux-armhf-cpython-311/biom
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c biom/_filter.c -o build/temp.linux-armhf-cpython-311/biom/_filter.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from biom/_filter.c:768:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/biom/_filter.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_filter.cpython-311-arm-linux-gnueabihf.so
building 'biom._transform' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c biom/_transform.c -o build/temp.linux-armhf-cpython-311/biom/_transform.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from biom/_transform.c:768:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/biom/_transform.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_transform.cpython-311-arm-linux-gnueabihf.so
building 'biom._subsample' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c biom/_subsample.c -o build/temp.linux-armhf-cpython-311/biom/_subsample.o
In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
                 from biom/_subsample.c:768:
/usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
   17 | #warning "Using deprecated NumPy API, disable it with " \
      |  ^~~~~~~
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/biom/_subsample.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_subsample.cpython-311-arm-linux-gnueabihf.so
# indep:
PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b html doc build/html
Running Sphinx v5.3.0
making output directory... done
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
Failed to import biom.table.
Possible hints:
* ModuleNotFoundError: No module named 'biom._filter'
* KeyError: 'biom'
Failed to import biom.
Possible hints:
* ModuleNotFoundError: No module named 'biom._filter'
* KeyError: 'biom'
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 12 source files that are out of date
updating environment: [new config] 12 added, 0 changed, 0 removed
reading sources... [  8%] BIOM_LICENSE
reading sources... [ 16%] documentation/adding_metadata
reading sources... [ 25%] documentation/biom_conversion
reading sources... [ 33%] documentation/biom_format
reading sources... [ 41%] documentation/format_versions/biom-1.0
reading sources... [ 50%] documentation/format_versions/biom-2.0
reading sources... [ 58%] documentation/format_versions/biom-2.1
reading sources... [ 66%] documentation/index
reading sources... [ 75%] documentation/quick_usage_examples
reading sources... [ 83%] documentation/summarizing_biom_tables
reading sources... [ 91%] documentation/table_objects
reading sources... [100%] index

WARNING: autodoc: failed to import module 'biom'; the following exception was raised:
No module named 'biom._filter'
WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised:
No module named 'biom._filter'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
writing output... [  8%] BIOM_LICENSE
writing output... [ 16%] documentation/adding_metadata
writing output... [ 25%] documentation/biom_conversion
writing output... [ 33%] documentation/biom_format
writing output... [ 41%] documentation/format_versions/biom-1.0
writing output... [ 50%] documentation/format_versions/biom-2.0
writing output... [ 58%] documentation/format_versions/biom-2.1
writing output... [ 66%] documentation/index
writing output... [ 75%] documentation/quick_usage_examples
writing output... [ 83%] documentation/summarizing_biom_tables
writing output... [ 91%] documentation/table_objects
writing output... [100%] index

/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated
generating indices... done
writing additional pages... search done
copying images... [100%] _static/biom-format.png

copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 6 warnings.

The HTML pages are in build/html.
PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b man doc build/man
Running Sphinx v5.3.0
making output directory... done
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
Failed to import biom.table.
Possible hints:
* ModuleNotFoundError: No module named 'biom._filter'
* KeyError: 'biom'
Failed to import biom.
Possible hints:
* ModuleNotFoundError: No module named 'biom._filter'
* KeyError: 'biom'
building [mo]: targets for 0 po files that are out of date
building [man]: all manpages
updating environment: [new config] 12 added, 0 changed, 0 removed
reading sources... [  8%] BIOM_LICENSE
reading sources... [ 16%] documentation/adding_metadata
reading sources... [ 25%] documentation/biom_conversion
reading sources... [ 33%] documentation/biom_format
reading sources... [ 41%] documentation/format_versions/biom-1.0
reading sources... [ 50%] documentation/format_versions/biom-2.0
reading sources... [ 58%] documentation/format_versions/biom-2.1
reading sources... [ 66%] documentation/index
reading sources... [ 75%] documentation/quick_usage_examples
reading sources... [ 83%] documentation/summarizing_biom_tables
reading sources... [ 91%] documentation/table_objects
reading sources... [100%] index

WARNING: autodoc: failed to import module 'biom'; the following exception was raised:
No module named 'biom._filter'
WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised:
No module named 'biom._filter'
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/format_versions/biom-2.1 documentation/quick_usage_examples documentation/table_objects documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE } done
build succeeded, 2 warnings.

The manual pages are in build/man.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_test -a -O--buildsystem=pybuild
	pybuild --test --test-pytest -i python{version} -p 3.11
I: pybuild pybuild:300: cp -r /<<PKGBUILDDIR>>/examples /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build
I: pybuild base:240: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build; python3.11 -m pytest 
============================= test session starts ==============================
platform linux -- Python 3.11.1, pytest-7.2.1, pluggy-1.0.0+repack
rootdir: /<<PKGBUILDDIR>>, configfile: pytest.ini
plugins: cov-4.0.0
collected 366 items

biom/tests/test_err.py .....................                             [  5%]
biom/tests/test_parse.py ..........................                      [ 12%]
biom/tests/test_table.py ............................................... [ 25%]
..sss................................................................... [ 45%]
....sss................................................................. [ 65%]
..............................................................           [ 81%]
biom/tests/test_util.py ..s................                              [ 87%]
biom/tests/test_cli/test_add_metadata.py ....                            [ 88%]
biom/tests/test_cli/test_show_install_info.py .                          [ 88%]
biom/tests/test_cli/test_subset_table.py .....                           [ 89%]
biom/tests/test_cli/test_summarize_table.py ..                           [ 90%]
biom/tests/test_cli/test_table_converter.py ......                       [ 92%]
biom/tests/test_cli/test_table_normalizer.py .                           [ 92%]
biom/tests/test_cli/test_uc_processor.py ......                          [ 93%]
biom/tests/test_cli/test_validate_table.py ......................        [100%]

=============================== warnings summary ===============================
biom/tests/test_table.py:19
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py:19: FutureWarning: pandas.util.testing is deprecated. Use the functions in the public API at pandas.testing instead.
    import pandas.util.testing as pdt

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::SupportTests::test_remove_empty_both
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::SupportTests::test_remove_empty_obs
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::SupportTests::test_remove_empty_sample
  /usr/lib/python3/dist-packages/scipy/sparse/_index.py:146: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
    self._set_arrayXarray(i, j, x)

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_observation_subset
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_sample_subset
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_observations_hdf5
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_samples_hdf5
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/table.py:4196: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
    data = np.hstack(h5_data[start:end]

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_observation_subset
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::TableTests::test_from_hdf5_sample_subset
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_observations_hdf5
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_subset_table.py::TestSubsetTable::test_subset_samples_hdf5
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/table.py:4198: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future.
    indices = np.hstack(h5_indices[start:end]

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py::TableTests::test_nnz_issue_727
  /usr/lib/python3/dist-packages/scipy/sparse/_index.py:103: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
    self._set_intXint(row, col, x.flat[0])

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:88: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
    lines.append('Num samples: ' + locale.format('%d', num_samples,

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:90: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
    lines.append('Num observations: ' + locale.format('%d',

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:95: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
    lines.append('Total count: ' + locale.format('%d', total_count,

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:110: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
    lines.append(' Min: ' + locale.format('%1.3f', min_counts, grouping=True))

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:111: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
    lines.append(' Max: ' + locale.format('%1.3f', max_counts, grouping=True))

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:112: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
    lines.append(' Median: ' + locale.format('%1.3f', median_counts,

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:114: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
    lines.append(' Mean: ' + locale.format('%1.3f', mean_counts,

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_default
.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py::TestSummarizeTable::test_qualitative
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:116: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
    lines.append(' Std. dev.: ' + locale.format('%1.3f',

.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py: 18 warnings
  /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py:143: DeprecationWarning: This method will be removed in a future version of Python. Use 'locale.format_string()' instead.
    lines.append('%s: ' % k + locale.format('%1.3f', v, grouping=True))

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
============ 359 passed, 7 skipped, 46 warnings in 64.28s (0:01:04) ============
	rm -fr -- /tmp/dh-xdg-rundir-14pJugPt
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=pybuild
   dh_prep -a -O--buildsystem=pybuild
	rm -f -- debian/python3-biom-format.substvars
	rm -fr -- debian/.debhelper/generated/python3-biom-format/ debian/python3-biom-format/ debian/tmp/
	rm -f debian/python3-biom-format.debhelper.log
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install
	install -m0755 -d /<<PKGBUILDDIR>>/debian/tmp
	pybuild --install -i python{version} -p 3.11 --dest-dir /<<PKGBUILDDIR>>/debian/tmp
I: pybuild base:240: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-biom-format 
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
  warnings.warn(
running build
running build_py
running egg_info
writing biom_format.egg-info/PKG-INFO
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing entry points to biom_format.egg-info/entry_points.txt
writing requirements to biom_format.egg-info/requires.txt
writing top-level names to biom_format.egg-info/top_level.txt
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no directories found matching 'support_files'
warning: no directories found matching 'tests/test_data'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
warning: no previously-included files matching '*.so' found anywhere in distribution
warning: no previously-included files matching '.*.swp' found anywhere in distribution
adding license file 'COPYING.txt'
writing manifest file 'biom_format.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'biom.assets' as data is deprecated, please list it in `packages`.
    !!


    ############################
    # Package would be ignored #
    ############################
    Python recognizes 'biom.assets' as an importable package,
    but it is not listed in the `packages` configuration of setuptools.

    'biom.assets' has been automatically added to the distribution only
    because it may contain data files, but this behavior is likely to change
    in future versions of setuptools (and therefore is considered deprecated).

    Please make sure that 'biom.assets' is included as a package by using
    the `packages` configuration field or the proper discovery methods
    (for example by using `find_namespace_packages(...)`/`find_namespace:`
    instead of `find_packages(...)`/`find:`).

    You can read more about "package discovery" and "data files" on setuptools
    documentation page.


!!

  check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'biom.tests.bench_tables' as data is deprecated, please list it in `packages`.
    !!


    ############################
    # Package would be ignored #
    ############################
    Python recognizes 'biom.tests.bench_tables' as an importable package,
    but it is not listed in the `packages` configuration of setuptools.

    'biom.tests.bench_tables' has been automatically added to the distribution only
    because it may contain data files, but this behavior is likely to change
    in future versions of setuptools (and therefore is considered deprecated).

    Please make sure that 'biom.tests.bench_tables' is included as a package by using
    the `packages` configuration field or the proper discovery methods
    (for example by using `find_namespace_packages(...)`/`find_namespace:`
    instead of `find_packages(...)`/`find:`).

    You can read more about "package discovery" and "data files" on setuptools
    documentation page.


!!

  check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'biom.tests.test_cli.test_data' as data is deprecated, please list it in `packages`.
    !!


    ############################
    # Package would be ignored #
    ############################
    Python recognizes 'biom.tests.test_cli.test_data' as an importable package,
    but it is not listed in the `packages` configuration of setuptools.

    'biom.tests.test_cli.test_data' has been automatically added to the distribution only
    because it may contain data files, but this behavior is likely to change
    in future versions of setuptools (and therefore is considered deprecated).

    Please make sure that 'biom.tests.test_cli.test_data' is included as a package by using
    the `packages` configuration field or the proper discovery methods
    (for example by using `find_namespace_packages(...)`/`find_namespace:`
    instead of `find_packages(...)`/`find:`).

    You can read more about "package discovery" and "data files" on setuptools
    documentation page.


!!

  check.warn(importable)
running build_ext
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-biom-format
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/util.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/err.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/table.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/exception.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/parse.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_err.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_util.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/long_lines.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_parse.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/bad_table.txt -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/bad_table.txt.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/empty.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/no-contents.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/test.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/test.json -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/test.json.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_add_metadata.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_table_converter.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_uc_processor.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_subset_table.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_validate_table.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_table_normalizer.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_show_install_info.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/test.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/test.json -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_add_metadata.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_show_install_info.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_subset_table.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_summarize_table.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_table_converter.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_table_normalizer.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_uc_processor.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_validate_table.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_err.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_parse.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/long_lines.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_table.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_util.cpython-311-pytest-7.2.1.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_subsetter.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_ids.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/util.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/installation_informer.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_converter.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/metadata_exporter.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/metadata_adder.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_validator.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_head.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_normalizer.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/uc_processor.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_summarizer.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/metadata_adder.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/util.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/metadata_exporter.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_converter.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/installation_informer.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_subsetter.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_normalizer.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_head.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_ids.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_validator.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/uc_processor.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_filter.pyx -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_subsample.pyx -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_transform.pyx -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/assets/exercise_api.py -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/assets/exercise_cli.sh -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_filter.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_transform.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/_subsample.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/table.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/exception.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/util.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/err.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/parse.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/examples/rich_sparse_otu_table.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/examples/obs_md.txt -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/examples/sam_md.txt -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_biom-format/build/examples/min_sparse_otu_table.biom -> /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/util.py to util.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/err.py to err.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/table.py to table.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/exception.py to exception.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/parse.py to parse.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_err.py to test_err.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_util.py to test_util.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/long_lines.py to long_lines.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_parse.py to test_parse.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_table.py to test_table.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_add_metadata.py to test_add_metadata.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_table_converter.py to test_table_converter.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_uc_processor.py to test_uc_processor.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_summarize_table.py to test_summarize_table.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_subset_table.py to test_subset_table.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_validate_table.py to test_validate_table.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_table_normalizer.py to test_table_normalizer.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_show_install_info.py to test_show_install_info.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_subsetter.py to table_subsetter.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_ids.py to table_ids.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/util.py to util.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_summarizer.py to table_summarizer.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/installation_informer.py to installation_informer.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_converter.py to table_converter.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/metadata_exporter.py to metadata_exporter.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/metadata_adder.py to metadata_adder.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_validator.py to table_validator.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_head.py to table_head.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_normalizer.py to table_normalizer.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/uc_processor.py to uc_processor.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets/exercise_api.py to exercise_api.cpython-311.pyc
running install_egg_info
Copying biom_format.egg-info to /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom_format-2.1.12.egg-info
Skipping SOURCES.txt
running install_scripts
Installing biom script to /<<PKGBUILDDIR>>/debian/python3-biom-format/usr/bin
I: pybuild pybuild:326: dh_numpy3
	mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars
find debian/python3-biom-format -name .coverage -delete
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--buildsystem=pybuild
	install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format
	install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format
	cp --reflink=auto -a ./debian/README.test debian/python3-biom-format/usr/share/doc/python3-biom-format
	cp --reflink=auto -a ./debian/tests/run-unit-test debian/python3-biom-format/usr/share/doc/python3-biom-format
	chmod -R u\+rw,go=rX debian/python3-biom-format/usr/share/doc
	install -p -m0644 debian/copyright debian/python3-biom-format/usr/share/doc/python3-biom-format/copyright
   dh_sphinxdoc -a -O--buildsystem=pybuild
dh_sphinxdoc: warning: Sphinx documentation not found
   dh_installchangelogs -a -O--buildsystem=pybuild
	install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format
	install -p -m0644 debian/.debhelper/generated/python3-biom-format/dh_installchangelogs.dch.trimmed debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog.Debian
	install -p -m0644 debian/.debhelper/generated/python3-biom-format/dh_installchangelogs.dch.binnmu debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog.Debian.armhf
	install -p -m0644 ./ChangeLog.md debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog
	rm -f debian/python3-biom-format.debhelper.log
   debian/rules override_dh_installexamples
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installexamples
	install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/min_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/min_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/obs_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/rich_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/rich_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
	cp --reflink=auto -a ./examples/sam_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples
find debian -name "*.c" -delete
find debian -name "*.pyx" -delete
# move tests from Python3 package to examples package
if [ ! -d biom/tests ] ; then \
    mv `find debian/python*biom-format -name tests -type d` biom ; \
else \
    find debian/python*biom-format -name tests -type d | xargs rm -rf ; \
fi
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installman -a -O--buildsystem=pybuild
	install -m0755 -d debian/python3-biom-format/usr/share/man/man1/
	install -p -m0644 ./debian/biom.1 debian/python3-biom-format/usr/share/man/man1/biom.1
	man-recode --to-code UTF-8 --suffix .dh-new debian/python3-biom-format/usr/share/man/man1/biom.1
	mv debian/python3-biom-format/usr/share/man/man1/biom.1.dh-new debian/python3-biom-format/usr/share/man/man1/biom.1
	chmod 0644 -- debian/python3-biom-format/usr/share/man/man1/biom.1
   dh_python3 -a -O--buildsystem=pybuild
D: dh_python3 dh_python3:175: version: 5.20220819+rpi1
D: dh_python3 dh_python3:176: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild']
D: dh_python3 dh_python3:177: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=True, package=None, no_package=None, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild'])
D: dh_python3 dh_python3:178: supported Python versions: 3.11 (default=3.11)
D: dh_python3 debhelper:141: skipping package: python-biom-format-doc
D: dh_python3 debhelper:172: source=python-biom-format, binary packages=['python3-biom-format']
D: dh_python3 dh_python3:196: processing package python3-biom-format...
D: dh_python3 fs:52: moving files from debian/python3-biom-format/usr/lib/python3.11/dist-packages to debian/python3-biom-format/usr/lib/python3/dist-packages/
D: dh_python3 fs:399: package python3-biom-format details = {'requires.txt': {'debian/python3-biom-format/usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/requires.txt'}, 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.11')}, 'ext_no_version': set()}
D: dh_python3 depends:117: generating dependencies for package python3-biom-format
D: dh_python3 pydist:172: trying to find dependency for click (python=None)
D: dh_python3 pydist:172: trying to find dependency for cython (python=None)
D: dh_python3 pydist:172: trying to find dependency for cython>=0.29 (python=None)
D: dh_python3 pydist:172: trying to find dependency for h5py (python=None)
D: dh_python3 pydist:172: trying to find dependency for numpy>=1.9.2 (python=None)
D: dh_python3 pydist:172: trying to find dependency for pandas>=0.20.0 (python=None)
D: dh_python3 pydist:172: trying to find dependency for scipy>=1.3.1 (python=None)
D: dh_python3 depends:281: D={'python3 (<< 3.12)', 'python3-h5py-serial', 'python3-numpy', 'python3 (>= 3.11~)', 'python3-scipy', 'python3-pandas', 'python3-click', 'cython3', 'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[]
   dh_installsystemduser -a -O--buildsystem=pybuild
   dh_perl -a -O--buildsystem=pybuild
   dh_link -a -O--buildsystem=pybuild
   dh_strip_nondeterminism -a -O--buildsystem=pybuild
   dh_compress -a -O--buildsystem=pybuild
	cd debian/python3-biom-format
	chmod a-x usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian usr/share/doc/python3-biom-format/changelog.Debian.armhf usr/share/man/man1/biom.1
	gzip -9nf usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian usr/share/doc/python3-biom-format/changelog.Debian.armhf usr/share/man/man1/biom.1
	cd '/<<PKGBUILDDIR>>'
	rm -f debian/python3-biom-format.debhelper.log
   debian/rules override_dh_fixperms
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_fixperms
	find debian/python3-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/python3-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/python3-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
	find debian/python3-biom-format/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/python3-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
	find debian/python3-biom-format/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
	find debian/python3-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian -name exercise_cli.sh -exec chmod +x \{\} \;
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_missing -a -O--buildsystem=pybuild
   dh_dwz -a -O--buildsystem=pybuild
	install -m0755 -d debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf
	dwz -mdebian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug -M/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug -- debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-arm-linux-gnueabihf.so
	objcopy --compress-debug-sections debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug
	chmod 0644 -- debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug
   dh_strip -a -O--buildsystem=pybuild
	install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/0b
	objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/0b/502f9c63878339dac311fab00b8a89a46a73b0.debug
	chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/0b/502f9c63878339dac311fab00b8a89a46a73b0.debug
	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-arm-linux-gnueabihf.so
	objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/0b/502f9c63878339dac311fab00b8a89a46a73b0.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-arm-linux-gnueabihf.so
	install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/37
	objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/37/003817db16a1cc35c27818e089a7edd54fc81e.debug
	chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/37/003817db16a1cc35c27818e089a7edd54fc81e.debug
	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-arm-linux-gnueabihf.so
	objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/37/003817db16a1cc35c27818e089a7edd54fc81e.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-arm-linux-gnueabihf.so
	install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/79
	objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-arm-linux-gnueabihf.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/79/8c5d85d743737f047a8c020bdf644178fa3d8f.debug
	chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/79/8c5d85d743737f047a8c020bdf644178fa3d8f.debug
	strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-arm-linux-gnueabihf.so
	objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/79/8c5d85d743737f047a8c020bdf644178fa3d8f.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-arm-linux-gnueabihf.so
	install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz
	cp --reflink=auto -a debian/python3-biom-format/usr/lib/debug/.dwz/arm-linux-gnueabihf debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz
	rm -fr debian/python3-biom-format/usr/lib/debug/.dwz
	rmdir -p --ignore-fail-on-non-empty debian/python3-biom-format/usr/lib/debug
	install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc
	ln -s python3-biom-format debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc/python3-biom-format-dbgsym
	install -m0755 -d debian/.debhelper/python3-biom-format
   dh_makeshlibs -a -O--buildsystem=pybuild
	rm -f debian/python3-biom-format/DEBIAN/shlibs
   dh_shlibdeps -a -O--buildsystem=pybuild
	install -m0755 -d debian/python3-biom-format/DEBIAN
	dpkg-shlibdeps -Tdebian/python3-biom-format.substvars debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-arm-linux-gnueabihf.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-arm-linux-gnueabihf.so
   dh_installdeb -a -O--buildsystem=pybuild
	install -m0755 -d debian/python3-biom-format/DEBIAN
	printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/postinst
	cat debian/python3-biom-format.postinst.debhelper >> debian/python3-biom-format/DEBIAN/postinst
	chmod 0755 -- debian/python3-biom-format/DEBIAN/postinst
	printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/prerm
	cat debian/python3-biom-format.prerm.debhelper >> debian/python3-biom-format/DEBIAN/prerm
	chmod 0755 -- debian/python3-biom-format/DEBIAN/prerm
   dh_gencontrol -a -O--buildsystem=pybuild
	install -m0755 -d debian/python3-biom-format/DEBIAN
	echo misc:Depends= >> debian/python3-biom-format.substvars
	echo misc:Pre-Depends= >> debian/python3-biom-format.substvars
	install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN
	dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/.debhelper/python3-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=python3-biom-format-dbgsym "-DDepends=python3-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python3-biom-format" "-DBuild-Ids=0b502f9c63878339dac311fab00b8a89a46a73b0 37003817db16a1cc35c27818e089a7edd54fc81e 798c5d85d743737f047a8c020bdf644178fa3d8f" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
	chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control
	dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/python3-biom-format
	chmod 0644 -- debian/python3-biom-format/DEBIAN/control
   dh_md5sums -a -O--buildsystem=pybuild
	install -m0755 -d debian/python3-biom-format/DEBIAN
	cd debian/python3-biom-format >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/python3-biom-format/DEBIAN/md5sums
	install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN
	cd debian/.debhelper/python3-biom-format/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
	chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums
   dh_builddeb -a -O--buildsystem=pybuild
	dpkg-deb --root-owner-group --build debian/python3-biom-format ..
	dpkg-deb --root-owner-group --build debian/.debhelper/python3-biom-format/dbgsym-root ..
dpkg-deb: building package 'python3-biom-format-dbgsym' in '../python3-biom-format-dbgsym_2.1.12-3+b1_armhf.deb'.
dpkg-deb: building package 'python3-biom-format' in '../python3-biom-format_2.1.12-3+b1_armhf.deb'.
 dpkg-genbuildinfo --build=any -O../python-biom-format_2.1.12-3+b1_armhf.buildinfo
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> -O../python-biom-format_2.1.12-3+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-02-05T06:16:49Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


python-biom-format_2.1.12-3+b1_armhf.changes:
---------------------------------------------

Format: 1.8
Date: Sat, 03 Dec 2022 23:45:03 +0530
Source: python-biom-format (2.1.12-3)
Binary: python3-biom-format python3-biom-format-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 2.1.12-3+b1
Distribution: bookworm-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
 python3-biom-format - Biological Observation Matrix (BIOM) format (Python 3)
Changes:
 python-biom-format (2.1.12-3+b1) bookworm-staging; urgency=low, binary-only=yes
 .
   * Binary-only non-maintainer upload for armhf; no source changes.
   * rebuild due to debcheck failure
Checksums-Sha1:
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 fab45cc3442557dc4ff55acf9412f53783477f0c 226316 python3-biom-format-dbgsym_2.1.12-3+b1_armhf.deb
 1eb9e2ee1ba7d0affa76a402085bbbf85cd8c215 120900 python3-biom-format_2.1.12-3+b1_armhf.deb
Checksums-Sha256:
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 3145e1d44ad13b6a59c9a861a700dc1141e46e16fcef67007f442a2ef9b35b95 226316 python3-biom-format-dbgsym_2.1.12-3+b1_armhf.deb
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Files:
 89f80b4e3bc36013c61e6b3bbad15321 10909 python optional python-biom-format_2.1.12-3+b1_armhf.buildinfo
 040daf61de1d58a350f3caaae7e69fa1 226316 debug optional python3-biom-format-dbgsym_2.1.12-3+b1_armhf.deb
 29df76f9af2ea924e26ac56d4f9a5c2f 120900 python optional python3-biom-format_2.1.12-3+b1_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


python3-biom-format-dbgsym_2.1.12-3+b1_armhf.deb
------------------------------------------------

 new Debian package, version 2.0.
 size 226316 bytes: control archive=720 bytes.
     518 bytes,    12 lines      control              
     417 bytes,     4 lines      md5sums              
 Package: python3-biom-format-dbgsym
 Source: python-biom-format (2.1.12-3)
 Version: 2.1.12-3+b1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 266
 Depends: python3-biom-format (= 2.1.12-3+b1)
 Section: debug
 Priority: optional
 Description: debug symbols for python3-biom-format
 Build-Ids: 0b502f9c63878339dac311fab00b8a89a46a73b0 37003817db16a1cc35c27818e089a7edd54fc81e 798c5d85d743737f047a8c020bdf644178fa3d8f

drwxr-xr-x root/root         0 2022-12-03 18:15 ./
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/debug/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/debug/.build-id/
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-rw-r--r-- root/root     77448 2022-12-03 18:15 ./usr/lib/debug/.build-id/0b/502f9c63878339dac311fab00b8a89a46a73b0.debug
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/debug/.build-id/37/
-rw-r--r-- root/root    117304 2022-12-03 18:15 ./usr/lib/debug/.build-id/37/003817db16a1cc35c27818e089a7edd54fc81e.debug
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/debug/.build-id/79/
-rw-r--r-- root/root     49036 2022-12-03 18:15 ./usr/lib/debug/.build-id/79/8c5d85d743737f047a8c020bdf644178fa3d8f.debug
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root     12956 2022-12-03 18:15 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-biom-format.debug
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/share/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/share/doc/
lrwxrwxrwx root/root         0 2022-12-03 18:15 ./usr/share/doc/python3-biom-format-dbgsym -> python3-biom-format


python3-biom-format_2.1.12-3+b1_armhf.deb
-----------------------------------------

 new Debian package, version 2.0.
 size 120900 bytes: control archive=2780 bytes.
    1966 bytes,    36 lines      control              
    4494 bytes,    49 lines      md5sums              
     285 bytes,    12 lines   *  postinst             #!/bin/sh
     398 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: python3-biom-format
 Source: python-biom-format (2.1.12-3)
 Version: 2.1.12-3+b1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 748
 Depends: python3-h5py, python3-numpy (>= 1:1.22.0), python3-numpy-abi9, cython3, python3 (<< 3.12), python3 (>= 3.11~), python3-click, python3-h5py-serial, python3-pandas, python3-scipy, python3:any, libc6 (>= 2.4)
 Suggests: python-biom-format-doc
 Breaks: biom-format-tools (<< 2.1.7+dfsg-3)
 Replaces: biom-format-tools (<< 2.1.7+dfsg-3)
 Provides: biom-format-tools
 Section: python
 Priority: optional
 Homepage: https://biom-format.org/
 Description: Biological Observation Matrix (BIOM) format (Python 3)
  The BIOM file format (canonically pronounced biome) is designed to be a
  general-use format for representing biological sample by observation
  contingency tables. BIOM is a recognized standard for the Earth
  Microbiome Project and is a Genomics Standards Consortium candidate
  project.
  .
  The BIOM format is designed for general use in broad areas of
  comparative -omics. For example, in marker-gene surveys, the primary use
  of this format is to represent OTU tables: the observations in this case
  are OTUs and the matrix contains counts corresponding to the number of
  times each OTU is observed in each sample. With respect to metagenome
  data, this format would be used to represent metagenome tables: the
  observations in this case might correspond to SEED subsystems, and the
  matrix would contain counts corresponding to the number of times each
  subsystem is observed in each metagenome. Similarly, with respect to
  genome data, this format may be used to represent a set of genomes: the
  observations in this case again might correspond to SEED subsystems, and
  the counts would correspond to the number of times each subsystem is
  observed in each genome.
  .
  This package provides the BIOM format library for the Python 3 interpreter.

drwxr-xr-x root/root         0 2022-12-03 18:15 ./
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/bin/
-rwxr-xr-x root/root       967 2022-12-03 18:15 ./usr/bin/biom
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/python3/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom/
-rw-r--r-- root/root      3021 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom/__init__.py
-rw-r--r-- root/root     68780 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom/_filter.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root     68504 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom/_subsample.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root     68584 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom/_transform.cpython-311-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom/assets/
-rw-r--r-- root/root      3582 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/assets/exercise_api.py
-rwxr-xr-x root/root      2205 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom/assets/exercise_cli.sh
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-rw-r--r-- root/root      1254 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/__init__.py
-rw-r--r-- root/root      3471 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/installation_informer.py
-rw-r--r-- root/root      7590 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/metadata_adder.py
-rw-r--r-- root/root      1879 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/metadata_exporter.py
-rw-r--r-- root/root      8810 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/table_converter.py
-rw-r--r-- root/root      1439 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/table_head.py
-rw-r--r-- root/root      1166 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/table_ids.py
-rw-r--r-- root/root      2679 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/table_normalizer.py
-rw-r--r-- root/root      5339 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/table_subsetter.py
-rw-r--r-- root/root      5350 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/table_summarizer.py
-rw-r--r-- root/root     20209 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/table_validator.py
-rw-r--r-- root/root      2908 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/uc_processor.py
-rw-r--r-- root/root      1030 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/cli/util.py
-rw-r--r-- root/root     14322 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/err.py
-rw-r--r-- root/root      1408 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/exception.py
-rw-r--r-- root/root     22454 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/parse.py
-rw-r--r-- root/root    194581 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/table.py
-rw-r--r-- root/root     16566 2022-03-26 00:15 ./usr/lib/python3/dist-packages/biom/util.py
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/
-rw-r--r-- root/root      1580 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/PKG-INFO
-rw-r--r-- root/root         1 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/dependency_links.txt
-rw-r--r-- root/root        38 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/entry_points.txt
-rw-r--r-- root/root        39 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/requires.txt
-rw-r--r-- root/root         5 2022-12-03 18:15 ./usr/lib/python3/dist-packages/biom_format-2.1.12.egg-info/top_level.txt
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/lib/python3/dist-packages/examples/
-rw-r--r-- root/root      1343 2022-12-03 18:15 ./usr/lib/python3/dist-packages/examples/min_sparse_otu_table.biom
-rw-r--r-- root/root     33800 2022-12-03 18:15 ./usr/lib/python3/dist-packages/examples/min_sparse_otu_table_hdf5.biom
-rw-r--r-- root/root       555 2022-12-03 18:15 ./usr/lib/python3/dist-packages/examples/obs_md.txt
-rw-r--r-- root/root      3431 2022-12-03 18:15 ./usr/lib/python3/dist-packages/examples/rich_sparse_otu_table.biom
-rw-r--r-- root/root     46952 2022-12-03 18:15 ./usr/lib/python3/dist-packages/examples/rich_sparse_otu_table_hdf5.biom
-rw-r--r-- root/root       244 2022-12-03 18:15 ./usr/lib/python3/dist-packages/examples/sam_md.txt
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/share/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/share/doc/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/share/doc/python3-biom-format/
-rw-r--r-- root/root       278 2022-11-13 15:16 ./usr/share/doc/python3-biom-format/README.test
-rw-r--r-- root/root       226 2022-12-03 18:15 ./usr/share/doc/python3-biom-format/changelog.Debian.armhf.gz
-rw-r--r-- root/root      1581 2022-12-03 18:15 ./usr/share/doc/python3-biom-format/changelog.Debian.gz
-rw-r--r-- root/root      9593 2022-03-26 00:15 ./usr/share/doc/python3-biom-format/changelog.gz
-rw-r--r-- root/root      1613 2022-11-13 15:16 ./usr/share/doc/python3-biom-format/copyright
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/share/doc/python3-biom-format/examples/
-rw-r--r-- root/root      1343 2022-03-26 00:15 ./usr/share/doc/python3-biom-format/examples/min_sparse_otu_table.biom
-rw-r--r-- root/root     33800 2022-03-26 00:15 ./usr/share/doc/python3-biom-format/examples/min_sparse_otu_table_hdf5.biom
-rw-r--r-- root/root       555 2022-03-26 00:15 ./usr/share/doc/python3-biom-format/examples/obs_md.txt
-rw-r--r-- root/root      3431 2022-03-26 00:15 ./usr/share/doc/python3-biom-format/examples/rich_sparse_otu_table.biom
-rw-r--r-- root/root     46952 2022-03-26 00:15 ./usr/share/doc/python3-biom-format/examples/rich_sparse_otu_table_hdf5.biom
-rw-r--r-- root/root       244 2022-03-26 00:15 ./usr/share/doc/python3-biom-format/examples/sam_md.txt
-rw-r--r-- root/root       979 2022-11-13 15:16 ./usr/share/doc/python3-biom-format/run-unit-test
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/share/man/
drwxr-xr-x root/root         0 2022-12-03 18:15 ./usr/share/man/man1/
-rw-r--r-- root/root       620 2022-12-03 18:15 ./usr/share/man/man1/biom.1.gz


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 109804
Build-Time: 1204
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 50140
Job: python-biom-format_2.1.12-3
Machine Architecture: armhf
Package: python-biom-format
Package-Time: 51804
Source-Version: 2.1.12-3
Space: 109804
Status: successful
Version: 2.1.12-3+b1
--------------------------------------------------------------------------------
Finished at 2023-02-05T06:16:49Z
Build needed 14:23:24, 109804k disc space

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