Raspbian Package Auto-Building

python-biom-format → 2.0.0+dfsg-1 → armhf → 2014-05-28 07:40:28

sbuild (Debian sbuild) 0.63.2 (18 Aug 2012) on testbuildd.raspbian.org

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║ python-biom-format 2.0.0+dfsg-1 (armhf)                    28 May 2014 07:26 ║
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Package: python-biom-format
Version: 2.0.0+dfsg-1
Source Version: 2.0.0+dfsg-1
Distribution: jessie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'build/python-biom-format-c9LBmX/python-biom-format-2.0.0+dfsg' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/python-biom-format-c9LBmX' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/jessie-staging-armhf-sbuild-a8282752-12c5-4a90-ae13-8526b5885a81' with '«CHROOT»'

┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot                                                                │
└──────────────────────────────────────────────────────────────────────────────┘

Get:1 http://172.17.0.1 jessie-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1 jessie-staging/main Sources [7282 kB]
Get:3 http://172.17.0.1 jessie-staging/main armhf Packages [8085 kB]
Ign http://172.17.0.1 jessie-staging/main Translation-en
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NOTICE: 'python-biom-format' packaging is maintained in the 'Svn' version control system at:
svn://anonscm.debian.org/debian-med/trunk/packages/python-biom-format/trunk/
Need to get 116 kB of source archives.
Get:1 http://172.17.0.1/private/ jessie-staging/main python-biom-format 2.0.0+dfsg-1 (dsc) [2282 B]
Get:2 http://172.17.0.1/private/ jessie-staging/main python-biom-format 2.0.0+dfsg-1 (tar) [106 kB]
Get:3 http://172.17.0.1/private/ jessie-staging/main python-biom-format 2.0.0+dfsg-1 (diff) [7124 B]
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-WOrxcL/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver)                         │
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Installing build dependencies
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The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 39 not upgraded.
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Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), dh-python, dh-linktree, cython, python-dev, python-numpy, python-scipy, python-h5py, help2man, python-cogent, pyqi (>= 0.3.2), python-nose, python-tox, python-sphinx, python-setuptools, bash-completion
Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), dh-python, dh-linktree, cython, python-dev, python-numpy, python-scipy, python-h5py, help2man, python-cogent, pyqi (>= 0.3.2), python-nose, python-tox, python-sphinx, python-setuptools, bash-completion
dpkg-deb: building package `sbuild-build-depends-python-biom-format-dummy' in `/«BUILDDIR»/resolver-YDAke8/apt_archive/sbuild-build-depends-python-biom-format-dummy.deb'.
OK
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install python-biom-format build dependencies (apt-based resolver)           │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
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The following extra packages will be installed:
  bash-completion bsdmainutils cython debhelper dh-linktree dh-python
  docutils-common file gcc-4.9-base gettext gettext-base groff-base help2man
  intltool-debian libamd2.3.1 libasprintf0c2 libatomic1 libblas3 libcamd2.3.1
  libccolamd2.8.0 libcholmod2.1.2 libcolamd2.8.0 libcroco3 libexpat1
  libexpat1-dev libffi6 libgcc1 libgfortran3 libglib2.0-0 libgomp1 libhdf5-7
  libjs-jquery libjs-sphinxdoc libjs-underscore liblapack3
  liblocale-gettext-perl libmagic1 libmpdec2 libpipeline1 libpython-dev
  libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal
  libpython2.7-stdlib libpython3-stdlib libpython3.3-minimal
  libpython3.3-stdlib libsqlite3-0 libssl1.0.0 libstdc++6 libumfpack5.6.2
  libunistring0 libxml2 man-db mime-support po-debconf pyqi python
  python-cogent python-decorator python-dev python-docutils python-h5py
  python-jinja2 python-markupsafe python-minimal python-nose python-numpy
  python-pkg-resources python-py python-pygments python-roman python-scipy
  python-setuptools python-six python-sphinx python-tox python-virtualenv
  python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3
  python3.3-minimal sgml-base sphinx-common xml-core
Suggested packages:
  wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser
  libmail-box-perl python-doc python-tk python-cogent-doc
  texlive-latex-recommended texlive-latex-base texlive-lang-french
  fonts-linuxlibertine ttf-linux-libertine python-jinja2-doc python-coverage
  python-nose-doc gfortran python-numpy-dbg python-numpy-doc python-distribute
  python-distribute-doc subversion python-pytest python-pytest-xdist
  ttf-bitstream-vera jsmath libjs-mathjax dvipng texlive-latex-extra
  texlive-fonts-recommended python2.7-doc binfmt-support python3-doc
  python3-tk python3.3-doc sgml-base-doc
Recommended packages:
  curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
  libglib2.0-data shared-mime-info javascript-common libmail-sendmail-perl
  python-pil libpaper-utils docutils-doc python-chardet python-imaging
  sphinx-doc python-pip
The following NEW packages will be installed:
  bash-completion bsdmainutils cython debhelper dh-linktree dh-python
  docutils-common file gettext gettext-base groff-base help2man
  intltool-debian libamd2.3.1 libasprintf0c2 libblas3 libcamd2.3.1
  libccolamd2.8.0 libcholmod2.1.2 libcolamd2.8.0 libcroco3 libexpat1
  libexpat1-dev libffi6 libgfortran3 libglib2.0-0 libhdf5-7 libjs-jquery
  libjs-sphinxdoc libjs-underscore liblapack3 liblocale-gettext-perl libmagic1
  libmpdec2 libpipeline1 libpython-dev libpython-stdlib libpython2.7
  libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
  libpython3.3-minimal libpython3.3-stdlib libsqlite3-0 libssl1.0.0
  libumfpack5.6.2 libunistring0 libxml2 man-db mime-support po-debconf pyqi
  python python-cogent python-decorator python-dev python-docutils python-h5py
  python-jinja2 python-markupsafe python-minimal python-nose python-numpy
  python-pkg-resources python-py python-pygments python-roman python-scipy
  python-setuptools python-six python-sphinx python-tox python-virtualenv
  python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.3
  python3.3-minimal sbuild-build-depends-python-biom-format-dummy sgml-base
  sphinx-common xml-core
The following packages will be upgraded:
  gcc-4.9-base libatomic1 libgcc1 libgomp1 libstdc++6
5 upgraded, 85 newly installed, 0 to remove and 34 not upgraded.
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Get:6 http://172.17.0.1/private/ jessie-staging/main libpipeline1 armhf 1.3.0-1 [21.1 kB]
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update-alternatives: using /usr/share/docutils/scripts/python2/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
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update-alternatives: using /usr/share/docutils/scripts/python2/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
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update-alternatives: using /usr/share/docutils/scripts/python2/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python2/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment                                                            │
└──────────────────────────────────────────────────────────────────────────────┘

Kernel: Linux 3.14-1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.24.51.20140425-1 dpkg-dev_1.17.6+rpi1 g++-4.6_4.6.4-5+rpi1 g++-4.8_4.8.2-21 gcc-4.6_4.6.4-5+rpi1 gcc-4.8_4.8.2-21 libc6-dev_2.18-5 libstdc++-4.8-dev_4.8.2-21 libstdc++6_4.9.0-4 libstdc++6-4.6-dev_4.6.4-5+rpi1 linux-libc-dev_3.13.10-1+rpi1
Package versions: apt_1.0.1 base-files_7.2+rpi1 base-passwd_3.5.28 bash_4.3-7 bash-completion_1:2.1-4 binutils_2.24.51.20140425-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.7 build-essential_11.6 bzip2_1.0.6-5 coreutils_8.21-1.2 cpio_2.11+dfsg-2 cpp_4:4.8.2-3 cpp-4.6_4.6.4-5+rpi1 cpp-4.8_4.8.2-21 cython_0.20.1+git90-g0e6e38e-1 dash_0.5.7-4 debconf_1.5.53 debfoster_2.7-1.2 debhelper_9.20140228 debianutils_4.4 dh-linktree_0.4 dh-python_1.20140511-1 diffutils_1:3.3-1 docutils-common_0.11-3 dpkg_1.17.6+rpi1 dpkg-dev_1.17.6+rpi1 e2fslibs_1.42.9-3 e2fsprogs_1.42.9-3 fakeroot_1.18.4-2 file_1:5.18-1 findutils_4.4.2-8 g++_4:4.8.2-3 g++-4.6_4.6.4-5+rpi1 g++-4.8_4.8.2-21 gcc_4:4.8.2-3 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.4-5+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8_4.8.2-21 gcc-4.8-base_4.8.2-21 gcc-4.9-base_4.9.0-4 gettext_0.18.3.2-1 gettext-base_0.18.3.2-1 gnupg_1.4.16-1.1 gpgv_1.4.16-1.1 grep_2.18-2 groff-base_1.22.2-5 gzip_1.6-3 help2man_1.45.1 hostname_3.15 init-system-helpers_1.18 initramfs-tools_0.115 initscripts_2.88dsf-53 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.1 klibc-utils_2.0.2-1+rpi1 kmod_16-2 libacl1_2.2.52-1 libamd2.3.1_1:4.2.1-3 libapt-pkg4.12_1.0.1 libarchive-extract-perl_0.72-1 libasan0_4.8.2-21 libasprintf0c2_0.18.3.2-1 libatomic1_4.9.0-4 libattr1_1:2.4.47-1 libaudit-common_1:2.3.6-1 libaudit1_1:2.3.6-1 libblas3_1.2.20110419-7 libblkid1_2.20.1-5.7 libbz2-1.0_1.0.6-5 libc-bin_2.18-5 libc-dev-bin_2.18-5 libc6_2.18-5 libc6-dev_2.18-5 libcamd2.3.1_1:4.2.1-3 libcap2_1:2.22-1.2 libccolamd2.8.0_1:4.2.1-3 libcholmod2.1.2_1:4.2.1-3 libclass-isa-perl_0.36-5 libcloog-isl4_0.18.2-1 libcolamd2.8.0_1:4.2.1-3 libcomerr2_1.42.9-3 libcroco3_0.6.8-2 libdb5.1_5.1.29-6 libdb5.3_5.3.28-3 libdbus-1-3_1.8.0-3 libdpkg-perl_1.17.6+rpi1 libexpat1_2.1.0-4 libexpat1-dev_2.1.0-4 libffi6_3.1~rc1+r3.0.13-12 libgc1c2_1:7.2d-6 libgcc-4.8-dev_4.8.2-21 libgcc1_1:4.9.0-4 libgdbm3_1.8.3-12 libgfortran3_4.9.0-4 libglib2.0-0_2.40.0-3 libgmp10_2:6.0.0+dfsg-2 libgomp1_4.9.0-4 libhdf5-7_1.8.12+docs-1.1+b1 libisl10_0.12.2-1 libjs-jquery_1.7.2+dfsg-3 libjs-sphinxdoc_1.2.2+dfsg-2 libjs-underscore_1.4.4-2 libklibc_2.0.2-1+rpi1 libkmod2_16-2 liblapack3_3.5.0-2 liblocale-gettext-perl_1.05-8 liblog-message-simple-perl_0.10-1 liblzma5_5.1.1alpha+20120614-2 libmagic1_1:5.18-1 libmodule-pluggable-perl_5.1-1 libmount1_2.20.1-5.7 libmpc2_0.9-4 libmpc3_1.0.1-1 libmpdec2_2.4.0-6 libmpfr4_3.1.2-1 libncurses5_5.9+20140118-1 libncursesw5_5.9+20140118-1 libpam-modules_1.1.8-3 libpam-modules-bin_1.1.8-3 libpam-runtime_1.1.8-3 libpam0g_1.1.8-3 libpcre3_1:8.31-5 libpipeline1_1.3.0-1 libpod-latex-perl_0.61-1 libprocps0_1:3.3.4-2 libprocps3_1:3.3.9-2 libpython-dev_2.7.6-2 libpython-stdlib_2.7.6-2 libpython2.7_2.7.7~rc1-1 libpython2.7-dev_2.7.7~rc1-1 libpython2.7-minimal_2.7.7~rc1-1 libpython2.7-stdlib_2.7.7~rc1-1 libpython3-stdlib_3.3.4-1 libpython3.3-minimal_3.3.5-1 libpython3.3-stdlib_3.3.5-1 libreadline6_6.3-6 libselinux1_2.2.2-1 libsemanage-common_2.2-1 libsemanage1_2.2-1 libsepol1_2.2-1 libslang2_2.2.4-16 libsqlite3-0_3.8.4.3-3 libss2_1.42.9-3 libssl1.0.0_1.0.1g-4 libstdc++-4.8-dev_4.8.2-21 libstdc++6_4.9.0-4 libstdc++6-4.6-dev_4.6.4-5+rpi1 libswitch-perl_2.17-1 libterm-ui-perl_0.42-1 libtimedate-perl_2.3000-2 libtinfo5_5.9+20140118-1 libudev0_175-7.2 libudev1_204-8 libumfpack5.6.2_1:4.2.1-3 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-23.3 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.7 libxml2_2.9.1+dfsg1-3 linux-libc-dev_3.13.10-1+rpi1 login_1:4.1.5.1-1.1 lsb-base_4.1+Debian12+rpi1 make_3.81-8.3 makedev_2.3.1-93 man-db_2.6.7.1-1 mawk_1.3.3-17 mime-support_3.55 mount_2.20.1-5.7 multiarch-support_2.18-5 nano_2.2.6-1.1 ncurses-base_5.9+20140118-1 ncurses-bin_5.9+20140118-1 passwd_1:4.1.5.1-1.1 patch_2.7.1-5 perl_5.18.2-2+b1 perl-base_5.18.2-2+b1 perl-modules_5.18.2-2 plymouth_0.8.8-16 po-debconf_1.0.16+nmu2 procps_1:3.3.9-2 pyqi_0.3.2+dfsg-1 python_2.7.6-2 python-cogent_1.5.3-2 python-decorator_3.4.0-2 python-dev_2.7.6-2 python-docutils_0.11-3 python-h5py_2.2.1-1 python-jinja2_2.7.2-2 python-markupsafe_0.23-1 python-minimal_2.7.6-2 python-nose_1.3.2-1 python-numpy_1:1.8.1-1 python-pkg-resources_3.6-1 python-py_1.4.20-1 python-pygments_1.6+dfsg-1 python-roman_2.0.0-1 python-scipy_0.13.3-2 python-setuptools_3.6-1 python-six_1.6.1-1 python-sphinx_1.2.2+dfsg-2 python-tox_1.6.0-1 python-virtualenv_1.11.4-1 python2.7_2.7.7~rc1-1 python2.7-dev_2.7.7~rc1-1 python2.7-minimal_2.7.7~rc1-1 python3_3.3.4-1 python3-minimal_3.3.4-1 python3.3_3.3.5-1 python3.3-minimal_3.3.5-1 raspbian-archive-keyring_20120528.2 readline-common_6.3-6 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-python-biom-format-dummy_0.invalid.0 sed_4.2.2-4 sensible-utils_0.0.9 sgml-base_1.26+nmu4 sphinx-common_1.2.2+dfsg-2 startpar_0.59-3 sysv-rc_2.88dsf-53 sysvinit_2.88dsf-53 sysvinit-core_2.88dsf-53 sysvinit-utils_2.88dsf-53 tar_1.27.1-2 tzdata_2014b-1 udev_204-8 util-linux_2.20.1-5.7 xml-core_0.13+nmu2 xz-utils_5.1.1alpha+20120614-2 zlib1g_1:1.2.8.dfsg-1

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build                                                                        │
└──────────────────────────────────────────────────────────────────────────────┘


Unpack source
─────────────

gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Thu May 22 09:28:45 2014 UTC using RSA key ID D1C646D1
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./python-biom-format_2.0.0+dfsg-1.dsc
dpkg-source: info: extracting python-biom-format in python-biom-format-2.0.0+dfsg
dpkg-source: info: unpacking python-biom-format_2.0.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking python-biom-format_2.0.0+dfsg-1.debian.tar.xz
dpkg-source: info: applying ignore_local_dist-packages.patch
dpkg-source: info: applying no-web-adds.patch

Check disc space
────────────────

Sufficient free space for build

User Environment
────────────────

APT_CONFIG=/var/lib/sbuild/apt.conf
COLUMNS=80
CONSOLE=/dev/console
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INIT_VERSION=sysvinit-2.88
LC_ALL=POSIX
LINES=24
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PREVLEVEL=N
PWD=/
RUNLEVEL=2
SCHROOT_ALIAS_NAME=jessie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=jessie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=jessie-staging-armhf-sbuild-a8282752-12c5-4a90-ae13-8526b5885a81
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
init=/sbin/init
previous=N
rootmnt=/root
runlevel=2

dpkg-buildpackage
─────────────────

dpkg-buildpackage: source package python-biom-format
dpkg-buildpackage: source version 2.0.0+dfsg-1
dpkg-buildpackage: source distribution unstable
 dpkg-source --before-build python-biom-format-2.0.0+dfsg
dpkg-buildpackage: host architecture armhf
 fakeroot debian/rules clean
dh clean --with python2 --buildsystem=pybuild --with linktree
   dh_testdir -O--buildsystem=pybuild
   debian/rules override_dh_auto_clean
make[1]: Entering directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg'
rm -rf build/tests
dh_auto_clean
I: pybuild base:170: python2.7 setup.py clean 
running clean
removing '/«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build' (and everything under it)
'build/bdist.linux-armv7l' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
find -name "._*" -delete  #Remove any Mac metadata files
make --directory=doc clean
make[2]: Entering directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc'
rm -rf _build/* documentation/generated
make[2]: Leaving directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc'
rm -f debian/bash-completion
rm -f python-code/support-code/_*.cpp
make[1]: Leaving directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg'
   dh_clean -O--buildsystem=pybuild
 debian/rules build-arch
dh build-arch --with python2 --buildsystem=pybuild --with linktree
   dh_testdir -a -O--buildsystem=pybuild
   dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:170: python2.7 setup.py config 
running config
   debian/rules override_dh_auto_build
make[1]: Entering directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg'
USE_CYTHON=true dh_auto_build
I: pybuild base:170: /usr/bin/python setup.py build 
Compiling biom/_filter.pyx because it changed.
Compiling biom/_transform.pyx because it changed.
Compiling biom/_subsample.pyx because it changed.
Cythonizing biom/_filter.pyx
Cythonizing biom/_subsample.pyx
Cythonizing biom/_transform.pyx
running build
running build_py
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom
copying biom/exception.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom
copying biom/parse.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom
copying biom/table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom
copying biom/util.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom
copying biom/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands
copying biom/commands/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands
copying biom/commands/installation_informer.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands
copying biom/commands/metadata_adder.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands
copying biom/commands/table_converter.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands
copying biom/commands/table_subsetter.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands
copying biom/commands/table_summarizer.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands
copying biom/commands/table_validator.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces
copying biom/interfaces/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse
copying biom/interfaces/optparse/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse
copying biom/interfaces/optparse/input_handler.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse
copying biom/interfaces/optparse/output_handler.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config
copying biom/interfaces/optparse/config/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config
copying biom/interfaces/optparse/config/add_metadata.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config
copying biom/interfaces/optparse/config/convert.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config
copying biom/interfaces/optparse/config/show_install_info.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config
copying biom/interfaces/optparse/config/subset_table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config
copying biom/interfaces/optparse/config/summarize_table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config
copying biom/interfaces/optparse/config/validate_table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html
copying biom/interfaces/html/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html
copying biom/interfaces/html/input_handler.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html
copying biom/interfaces/html/output_handler.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config
copying biom/interfaces/html/config/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config
copying biom/interfaces/html/config/add_metadata.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config
copying biom/interfaces/html/config/convert.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config
copying biom/interfaces/html/config/show_install_info.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config
copying biom/interfaces/html/config/summarize_table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config
copying biom/interfaces/html/config/validate_table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config
running build_ext
building 'biom._filter' extension
creating build
creating build/temp.linux-armv7l-2.7
creating build/temp.linux-armv7l-2.7/biom
arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_filter.c -o build/temp.linux-armv7l-2.7/biom/_filter.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from biom/_filter.c:352:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it by " \
  ^
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:26:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from biom/_filter.c:352:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: '_import_array' defined but not used [-Wunused-function]
 _import_array(void)
 ^
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ufuncobject.h:327:0,
                 from biom/_filter.c:353:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: '_import_umath' defined but not used [-Wunused-function]
 _import_umath(void)
 ^
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z,relro -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-2.7/biom/_filter.o -o /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_filter.so
building 'biom._transform' extension
arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_transform.c -o build/temp.linux-armv7l-2.7/biom/_transform.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from biom/_transform.c:352:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it by " \
  ^
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:26:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from biom/_transform.c:352:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: '_import_array' defined but not used [-Wunused-function]
 _import_array(void)
 ^
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ufuncobject.h:327:0,
                 from biom/_transform.c:353:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: '_import_umath' defined but not used [-Wunused-function]
 _import_umath(void)
 ^
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z,relro -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-2.7/biom/_transform.o -o /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_transform.so
building 'biom._subsample' extension
arm-linux-gnueabihf-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_subsample.c -o build/temp.linux-armv7l-2.7/biom/_subsample.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from biom/_subsample.c:352:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it by " \
  ^
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:26:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from biom/_subsample.c:352:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: '_import_array' defined but not used [-Wunused-function]
 _import_array(void)
 ^
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ufuncobject.h:327:0,
                 from biom/_subsample.c:353:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__ufunc_api.h:241:1: warning: '_import_umath' defined but not used [-Wunused-function]
 _import_umath(void)
 ^
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -Wl,-z,relro -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-2.7/biom/_subsample.o -o /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_subsample.so
running build_scripts
creating build/scripts-2.7
copying and adjusting scripts/add_metadata.py -> build/scripts-2.7
copying and adjusting scripts/biom_validator.py -> build/scripts-2.7
copying and adjusting scripts/convert_biom.py -> build/scripts-2.7
copying and adjusting scripts/print_biom_python_config.py -> build/scripts-2.7
copying and adjusting scripts/print_biom_table_summary.py -> build/scripts-2.7
copying scripts/serve-biom -> build/scripts-2.7
copying and adjusting scripts/subset_biom.py -> build/scripts-2.7
copying scripts/biom -> build/scripts-2.7
changing mode of build/scripts-2.7/add_metadata.py from 664 to 775
changing mode of build/scripts-2.7/biom_validator.py from 664 to 775
changing mode of build/scripts-2.7/convert_biom.py from 664 to 775
changing mode of build/scripts-2.7/print_biom_python_config.py from 664 to 775
changing mode of build/scripts-2.7/print_biom_table_summary.py from 664 to 775
changing mode of build/scripts-2.7/serve-biom from 644 to 755
changing mode of build/scripts-2.7/subset_biom.py from 664 to 775
DEB_BUILD_OPTIONS= pybuild -s custom -p 2.7 --test --test-args 'make --directory=doc singlehtml'
I: pybuild base:170: make --directory=doc singlehtml
make[2]: Entering directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc'
sphinx-build -b singlehtml -d _build/doctrees  -W . _build/singlehtml
Making output directory...
Running Sphinx v1.2.2
loading pickled environment... not yet created
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
[autosummary] generating autosummary for: /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.rst
[autosummary] generating autosummary for: /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.__eq__.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.__format__.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.__getitem__.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.__init__.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.__iter__.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.__ne__.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.__new__.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.__reduce__.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.__reduce_ex__.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.__repr__.rst, ..., /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.shape.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.sort.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.sort_order.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.subsample.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.sum.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.to_hdf5.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.to_json.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.to_tsv.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.transform.rst, /«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc/documentation/generated/biom.table.Table.transpose.rst
building [singlehtml]: all documents
updating environment: 76 added, 0 changed, 0 removed
reading sources... [  1%] BIOM_LICENSE
reading sources... [  2%] documentation/adding_metadata
reading sources... [  3%] documentation/biom_conversion
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reading sources... [ 10%] documentation/generated/biom.table.Table.__eq__
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preparing documents... done
assembling single document... documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/table_objects documentation/generated/biom.table.Table documentation/generated/biom.table.Table.dtype documentation/generated/biom.table.Table.nnz documentation/generated/biom.table.Table.shape documentation/generated/biom.table.Table.__getitem__ documentation/generated/biom.table.Table._extract_data_from_tsv documentation/generated/biom.table.Table.add_metadata documentation/generated/biom.table.Table.collapse documentation/generated/biom.table.Table.copy documentation/generated/biom.table.Table.data documentation/generated/biom.table.Table.delimited_self documentation/generated/biom.table.Table.descriptive_equality documentation/generated/biom.table.Table.exists documentation/generated/biom.table.Table.filter documentation/generated/biom.table.Table.from_hdf5 documentation/generated/biom.table.Table.from_json documentation/generated/biom.table.Table.from_tsv documentation/generated/biom.table.Table.get_table_density documentation/generated/biom.table.Table.get_value_by_ids documentation/generated/biom.table.Table.index documentation/generated/biom.table.Table.is_empty documentation/generated/biom.table.Table.iter documentation/generated/biom.table.Table.iter_data documentation/generated/biom.table.Table.merge documentation/generated/biom.table.Table.metadata documentation/generated/biom.table.Table.nonzero documentation/generated/biom.table.Table.nonzero_counts documentation/generated/biom.table.Table.norm documentation/generated/biom.table.Table.pa documentation/generated/biom.table.Table.partition documentation/generated/biom.table.Table.reduce documentation/generated/biom.table.Table.sort documentation/generated/biom.table.Table.sort_order documentation/generated/biom.table.Table.subsample documentation/generated/biom.table.Table.sum documentation/generated/biom.table.Table.to_hdf5 documentation/generated/biom.table.Table.to_json documentation/generated/biom.table.Table.to_tsv documentation/generated/biom.table.Table.transform documentation/generated/biom.table.Table.transpose documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE 
writing... done
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copying images... [100%] _static/biom-format.png

copying static files... done
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dumping object inventory... done
build succeeded.

Build finished. The HTML page is in _build/singlehtml.
make[2]: Leaving directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc'
DEB_BUILD_OPTIONS= pybuild -s custom -p 2.7 --test --test-args 'pyqi make-bash-completion \
	    --command-config-module biom.interfaces.optparse.config \
	    --driver-name biom -o debian/bash-completion'
I: pybuild base:170: pyqi make-bash-completion \
    --command-config-module biom.interfaces.optparse.config \
    --driver-name biom -o debian/bash-completion
make[1]: Leaving directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg'
   dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:170: cd /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build; python2.7 -m nose --with-doctest 
......................
----------------------------------------------------------------------
Ran 22 tests in 1.680s

OK
 fakeroot debian/rules binary-arch
dh binary-arch --with python2 --buildsystem=pybuild --with linktree
   dh_testroot -a -O--buildsystem=pybuild
   dh_prep -a -O--buildsystem=pybuild
   dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:170: /usr/bin/python setup.py install --root /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format 
running install
running build
running build_py
running build_ext
running build_scripts
running install_lib
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/exception.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/parse.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/util.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/installation_informer.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/metadata_adder.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_converter.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_subsetter.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_summarizer.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_validator.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/metadata_adder.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_converter.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/installation_informer.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_subsetter.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_summarizer.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/commands/table_validator.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/commands
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/input_handler.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/output_handler.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/add_metadata.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/convert.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/show_install_info.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/subset_table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/summarize_table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/validate_table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/add_metadata.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/convert.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/show_install_info.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/subset_table.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/summarize_table.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/config/validate_table.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/input_handler.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/optparse/output_handler.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/optparse
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/input_handler.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/output_handler.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/__init__.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/add_metadata.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/convert.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/show_install_info.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/summarize_table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/validate_table.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/add_metadata.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/convert.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/show_install_info.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/summarize_table.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/config/validate_table.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html/config
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/input_handler.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/html/output_handler.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces/html
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/interfaces/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/interfaces
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_filter.so -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_transform.so -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/_subsample.so -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/__init__.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/table.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/exception.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/util.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
copying /«BUILDDIR»/python-biom-format-2.0.0+dfsg/.pybuild/pythonX.Y_2.7/build/biom/parse.pyc -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom
running install_egg_info
running egg_info
creating biom_format.egg-info
writing requirements to biom_format.egg-info/requires.txt
writing biom_format.egg-info/PKG-INFO
writing top-level names to biom_format.egg-info/top_level.txt
writing dependency_links to biom_format.egg-info/dependency_links.txt
writing manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest file 'biom_format.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
no previously-included directories found matching 'docs/_build'
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '.git' found anywhere in distribution
writing manifest file 'biom_format.egg-info/SOURCES.txt'
Copying biom_format.egg-info to /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom_format-2.0.0.egg-info
running install_scripts
creating /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin
copying build/scripts-2.7/add_metadata.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin
copying build/scripts-2.7/biom_validator.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin
copying build/scripts-2.7/convert_biom.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin
copying build/scripts-2.7/print_biom_python_config.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin
copying build/scripts-2.7/print_biom_table_summary.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin
copying build/scripts-2.7/serve-biom -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin
copying build/scripts-2.7/subset_biom.py -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin
copying build/scripts-2.7/biom -> /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin
changing mode of /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin/add_metadata.py to 775
changing mode of /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin/biom_validator.py to 775
changing mode of /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin/convert_biom.py to 775
changing mode of /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin/print_biom_python_config.py to 775
changing mode of /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin/print_biom_table_summary.py to 775
changing mode of /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin/serve-biom to 755
changing mode of /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin/subset_biom.py to 775
changing mode of /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin/biom to 755
   debian/rules override_dh_install
make[1]: Entering directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg'
dh_install
dh_bash-completion
dh_bash-completion: file-list parsing failed, installing as proper snippet
# All *.py scripts simply say
#   "This script no longer exists. ..."
rm -f /«BUILDDIR»/python-biom-format-2.0.0+dfsg/debian/python-biom-format/usr/bin/*.py
make[1]: Leaving directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg'
   dh_installdocs -a -O--buildsystem=pybuild
   dh_installchangelogs -a -O--buildsystem=pybuild
   dh_installexamples -a -O--buildsystem=pybuild
   debian/rules override_dh_installman
make[1]: Entering directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg'
DEB_BUILD_OPTIONS= pybuild -s custom -p 2.7 --test --test-args 'make --directory=doc man'
I: pybuild base:170: make --directory=doc man
make[2]: Entering directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc'
sphinx-build -b man -d _build/doctrees  -W . _build/man
Making output directory...
Running Sphinx v1.2.2
loading pickled environment... done
[autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst
building [man]: all manpages
updating environment: 0 added, 0 changed, 0 removed
looking for now-outdated files... none found
writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/table_objects documentation/generated/biom.table.Table documentation/generated/biom.table.Table.dtype documentation/generated/biom.table.Table.nnz documentation/generated/biom.table.Table.shape documentation/generated/biom.table.Table.__getitem__ documentation/generated/biom.table.Table._extract_data_from_tsv documentation/generated/biom.table.Table.add_metadata documentation/generated/biom.table.Table.collapse documentation/generated/biom.table.Table.copy documentation/generated/biom.table.Table.data documentation/generated/biom.table.Table.delimited_self documentation/generated/biom.table.Table.descriptive_equality documentation/generated/biom.table.Table.exists documentation/generated/biom.table.Table.filter documentation/generated/biom.table.Table.from_hdf5 documentation/generated/biom.table.Table.from_json documentation/generated/biom.table.Table.from_tsv documentation/generated/biom.table.Table.get_table_density documentation/generated/biom.table.Table.get_value_by_ids documentation/generated/biom.table.Table.index documentation/generated/biom.table.Table.is_empty documentation/generated/biom.table.Table.iter documentation/generated/biom.table.Table.iter_data documentation/generated/biom.table.Table.merge documentation/generated/biom.table.Table.metadata documentation/generated/biom.table.Table.nonzero documentation/generated/biom.table.Table.nonzero_counts documentation/generated/biom.table.Table.norm documentation/generated/biom.table.Table.pa documentation/generated/biom.table.Table.partition documentation/generated/biom.table.Table.reduce documentation/generated/biom.table.Table.sort documentation/generated/biom.table.Table.sort_order documentation/generated/biom.table.Table.subsample documentation/generated/biom.table.Table.sum documentation/generated/biom.table.Table.to_hdf5 documentation/generated/biom.table.Table.to_json documentation/generated/biom.table.Table.to_tsv documentation/generated/biom.table.Table.transform documentation/generated/biom.table.Table.transpose documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE } 
build succeeded.

Build finished. The manual pages are in _build/man.
make[2]: Leaving directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg/doc'
dh_installman
make[1]: Leaving directory `/«BUILDDIR»/python-biom-format-2.0.0+dfsg'
   dh_python2 -a -O--buildsystem=pybuild
I: dh_python2 fs:297: renaming _filter.so to _filter.arm-linux-gnueabihf.so
I: dh_python2 fs:297: renaming _subsample.so to _subsample.arm-linux-gnueabihf.so
I: dh_python2 fs:297: renaming _transform.so to _transform.arm-linux-gnueabihf.so
   dh_perl -a -O--buildsystem=pybuild
   dh_link -a -O--buildsystem=pybuild
   dh_linktree -a -O--buildsystem=pybuild
   dh_compress -a -O--buildsystem=pybuild
   dh_fixperms -a -O--buildsystem=pybuild
   dh_strip -a -O--buildsystem=pybuild
   dh_makeshlibs -a -O--buildsystem=pybuild
   dh_shlibdeps -a -O--buildsystem=pybuild
   dh_installdeb -a -O--buildsystem=pybuild
   dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Versions}
dpkg-gencontrol: warning: package python-biom-format: unused substitution variable ${python:Provides}
   dh_md5sums -a -O--buildsystem=pybuild
   dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package `python-biom-format' in `../python-biom-format_2.0.0+dfsg-1_armhf.deb'.
 dpkg-genchanges -B -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../python-biom-format_2.0.0+dfsg-1_armhf.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
 dpkg-source --after-build python-biom-format-2.0.0+dfsg
dpkg-buildpackage: binary-only upload (no source included)
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Build finished at 20140528-0740

Finished
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I: Built successfully

┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘


python-biom-format_2.0.0+dfsg-1_armhf.changes:
──────────────────────────────────────────────

Format: 1.8
Date: Tue, 20 May 2014 19:16:23 +0200
Source: python-biom-format
Binary: python-biom-format
Architecture: armhf
Version: 2.0.0+dfsg-1
Distribution: jessie-staging
Urgency: medium
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description: 
 python-biom-format - Biological Observation Matrix (BIOM) format
Changes: 
 python-biom-format (2.0.0+dfsg-1) unstable; urgency=medium
 .
   * New upstream version (adpated Build-Depends and patches)
   * switch to dh-python using buildsystem=pybuild
   * New (versioned) Build-Depends
   * Add ${shlibs:Depends} since package is now arch any
Checksums-Sha1: 
 a6283f7bea8d376cd27d80bc1668b71ee3c5de22 181812 python-biom-format_2.0.0+dfsg-1_armhf.deb
Checksums-Sha256: 
 7fee6c38eba39b1260c0eab7a305a89e2a8f7ed9fcbb510f53b7963aafe5a277 181812 python-biom-format_2.0.0+dfsg-1_armhf.deb
Files: 
 0c4f26c602441e6d4d8a72fedfcf5e46 181812 python optional python-biom-format_2.0.0+dfsg-1_armhf.deb

┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents                                                             │
└──────────────────────────────────────────────────────────────────────────────┘


python-biom-format_2.0.0+dfsg-1_armhf.deb
─────────────────────────────────────────

 new debian package, version 2.0.
 size 181812 bytes: control archive=3939 bytes.
      42 bytes,     1 lines      conffiles            
    1659 bytes,    29 lines      control              
    7862 bytes,    82 lines      md5sums              
     166 bytes,     9 lines   *  postinst             #!/bin/sh
     271 bytes,    14 lines   *  prerm                #!/bin/sh
 Package: python-biom-format
 Version: 2.0.0+dfsg-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 707
 Depends: python-scipy, python:any (>= 2.7.5-5~), python (<< 2.8), pyqi (>= 0.3.2), python-numpy, python (>= 2.7~), sphinx-common (>= 1.2.2+dfsg), libc6 (>= 2.4), python-cogent, python-h5py
 Section: python
 Priority: optional
 Homepage: http://biom-format.org/
 Description: Biological Observation Matrix (BIOM) format
  The BIOM file format (canonically pronounced biome) is designed to be a
  general-use format for representing biological sample by observation
  contingency tables. BIOM is a recognized standard for the Earth
  Microbiome Project and is a Genomics Standards Consortium candidate
  project.
  .
  The BIOM format is designed for general use in broad areas of
  comparative -omics. For example, in marker-gene surveys, the primary use
  of this format is to represent OTU tables: the observations in this case
  are OTUs and the matrix contains counts corresponding to the number of
  times each OTU is observed in each sample. With respect to metagenome
  data, this format would be used to represent metagenome tables: the
  observations in this case might correspond to SEED subsystems, and the
  matrix would contain counts corresponding to the number of times each
  subsystem is observed in each metagenome. Similarly, with respect to
  genome data, this format may be used to represent a set of genomes: the
  observations in this case again might correspond to SEED subsystems, and
  the counts would correspond to the number of times each subsystem is
  observed in each genome.

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┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build                                                                   │
└──────────────────────────────────────────────────────────────────────────────┘


┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use

┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Build Architecture: armhf
Build-Space: 7676
Build-Time: 168
Distribution: jessie-staging
Host Architecture: armhf
Install-Time: 587
Job: python-biom-format_2.0.0+dfsg-1
Machine Architecture: armhf
Package: python-biom-format
Package-Time: 810
Source-Version: 2.0.0+dfsg-1
Space: 7676
Status: successful
Version: 2.0.0+dfsg-1
────────────────────────────────────────────────────────────────────────────────
Finished at 20140528-0740
Build needed 00:13:30, 7676k disc space

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