pybigwig →
0.3.18+dfsg-1 →
armhf → 2022-04-13 12:36:37
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd
+==============================================================================+
| pybigwig 0.3.18+dfsg-1 (armhf) Wed, 13 Apr 2022 12:22:58 +0000 |
+==============================================================================+
Package: pybigwig
Version: 0.3.18+dfsg-1
Source Version: 0.3.18+dfsg-1
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-03d8b7ec-b470-407b-af59-bebd7dc2e1dd' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [12.9 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [13.9 MB]
Fetched 26.8 MB in 29s (909 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'pybigwig' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/pybigwig.git
Please use:
git clone https://salsa.debian.org/med-team/pybigwig.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 37.3 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main pybigwig 0.3.18+dfsg-1 (dsc) [2168 B]
Get:2 http://172.17.4.1/private bookworm-staging/main pybigwig 0.3.18+dfsg-1 (tar) [30.9 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main pybigwig 0.3.18+dfsg-1 (diff) [4228 B]
Fetched 37.3 kB in 0s (298 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/pybigwig-kJ2F9w/pybigwig-0.3.18+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/pybigwig-kJ2F9w' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-dWrjDB/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-dWrjDB/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-dWrjDB/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2835 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (22.2 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12608 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-python, libcurl4-gnutls-dev, zlib1g-dev, libbigwig-dev, python3-all, python3-all-dev, python3-numpy, python3-setuptools
Filtered Build-Depends: debhelper-compat (= 13), dh-python, libcurl4-gnutls-dev, zlib1g-dev, libbigwig-dev, python3-all, python3-all-dev, python3-numpy, python3-setuptools
dpkg-deb: building package 'sbuild-build-depends-pybigwig-dummy' in '/<<BUILDDIR>>/resolver-dWrjDB/apt_archive/sbuild-build-depends-pybigwig-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-pybigwig-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ Sources [549 B]
Get:5 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ Packages [631 B]
Fetched 2513 B in 1s (3459 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install pybigwig build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file gcc-12-base gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libbigwig-dev
libbigwig0 libblas3 libbrotli1 libcurl3-gnutls libcurl4-gnutls-dev
libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libgfortran5 libicu67 libjs-jquery
libjs-sphinxdoc libjs-underscore liblapack3 libmagic-mgc libmagic1 libmpdec3
libnghttp2-14 libpipeline1 libpsl5 libpython3-all-dev libpython3-dev
libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal
libpython3.10-stdlib libpython3.9 libpython3.9-dev libpython3.9-minimal
libpython3.9-stdlib librtmp1 libsigsegv2 libssh2-1 libsub-override-perl
libtool libuchardet0 libxml2 m4 man-db media-types po-debconf python3
python3-all python3-all-dev python3-dev python3-distutils python3-lib2to3
python3-minimal python3-numpy python3-pkg-resources python3-setuptools
python3.10 python3.10-dev python3.10-minimal python3.9 python3.9-dev
python3.9-minimal zlib1g zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make flit python3-build
python3-tomli python3-installer gettext-doc libasprintf-dev libgettextpo-dev
groff libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev
librtmp-dev libssh2-1-dev pkg-config libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl python3-doc python3-tk python3-venv gfortran
python-numpy-doc python3-pytest python-setuptools-doc python3.10-venv
python3.10-doc binfmt-support python3.9-venv python3.9-doc
Recommended packages:
curl | wget | lynx curl ca-certificates libarchive-cpio-perl
javascript-common publicsuffix libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file gcc-12-base gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libbigwig-dev
libbigwig0 libblas3 libbrotli1 libcurl3-gnutls libcurl4-gnutls-dev
libdebhelper-perl libelf1 libexpat1 libexpat1-dev
libfile-stripnondeterminism-perl libgfortran5 libicu67 libjs-jquery
libjs-sphinxdoc libjs-underscore liblapack3 libmagic-mgc libmagic1 libmpdec3
libnghttp2-14 libpipeline1 libpsl5 libpython3-all-dev libpython3-dev
libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal
libpython3.10-stdlib libpython3.9 libpython3.9-dev libpython3.9-minimal
libpython3.9-stdlib librtmp1 libsigsegv2 libssh2-1 libsub-override-perl
libtool libuchardet0 libxml2 m4 man-db media-types po-debconf python3
python3-all python3-all-dev python3-dev python3-distutils python3-lib2to3
python3-minimal python3-numpy python3-pkg-resources python3-setuptools
python3.10 python3.10-dev python3.10-minimal python3.9 python3.9-dev
python3.9-minimal sbuild-build-depends-pybigwig-dummy zlib1g-dev
The following packages will be upgraded:
zlib1g
1 upgraded, 80 newly installed, 0 to remove and 29 not upgraded.
Need to get 47.5 MB of archives.
After this operation, 192 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-dWrjDB/apt_archive ./ sbuild-build-depends-pybigwig-dummy 0.invalid.0 [920 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf libpython3.9-minimal armhf 3.9.12-1+rpi1 [794 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.4.8-1 [84.1 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf zlib1g armhf 1:1.2.11.dfsg-4 [84.2 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf python3.9-minimal armhf 3.9.12-1+rpi1 [1595 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.9.8-1 [38.5 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf media-types all 7.0.0 [32.9 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libpython3.9-stdlib armhf 3.9.12-1+rpi1 [1611 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf python3.9 armhf 3.9.12-1+rpi1 [492 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.9.8-1 [21.6 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.9.8-1 [38.1 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.4-1 [811 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.4-1 [1633 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-8 [793 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.37.3-1 [136 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.5-1 [32.9 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.10.2-1 [1362 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-2 [295 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-2 [119 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-2 [65.8 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-6 [171 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf libsigsegv2 armhf 2.14-1 [36.6 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-6 [510 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.6 [193 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-3 [526 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-1 [15.8 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.186-1 [174 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14-1 [83.0 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf libicu67 armhf 67.1-7 [8291 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.13+dfsg-1 [593 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-6 [1214 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.6 [1054 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf python3-lib2to3 all 3.9.12-1 [79.9 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf python3-distutils all 3.9.12-1 [146 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf dh-python all 5.20220403 [113 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf gcc-12-base armhf 12-20220319-1+rpi1 [207 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b1 [261 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf libnghttp2-14 armhf 1.43.0-1 [65.3 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf libpsl5 armhf 0.21.0-1.2 [56.2 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf libssh2-1 armhf 1.10.0-3 [161 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf libcurl3-gnutls armhf 7.82.0-2 [313 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libbigwig0 armhf 0.4.6+dfsg-1 [23.6 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf libbigwig-dev armhf 0.4.6+dfsg-1 [32.2 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf libblas3 armhf 3.10.0-2 [109 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf libcurl4-gnutls-dev armhf 7.82.0-2 [389 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libexpat1-dev armhf 2.4.8-1 [137 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf libgfortran5 armhf 12-20220319-1+rpi1 [238 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery all 3.6.0+dfsg+~3.5.13-1 [316 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf libjs-underscore all 1.13.2~dfsg-2 [116 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf libjs-sphinxdoc all 4.5.0-1 [142 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf liblapack3 armhf 3.10.0-2 [1590 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf libpython3.9 armhf 3.9.12-1+rpi1 [1419 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-4 [183 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf libpython3.9-dev armhf 3.9.12-1+rpi1 [3013 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf libpython3-dev armhf 3.9.8-1 [21.9 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.4-1 [1625 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10 armhf 3.10.4-1 [1454 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-dev armhf 3.10.4-1 [2984 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf libpython3-all-dev armhf 3.9.8-1 [1072 B]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf python3.10 armhf 3.10.4-1 [536 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf python3-all armhf 3.9.8-1 [1060 B]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf python3.9-dev armhf 3.9.12-1+rpi1 [501 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf python3-dev armhf 3.9.8-1 [25.3 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf python3.10-dev armhf 3.10.4-1 [508 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf python3-all-dev armhf 3.9.8-1 [1076 B]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf python3-pkg-resources all 59.6.0-1.2 [196 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf python3-numpy armhf 1:1.21.5-1+b1 [5157 kB]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf python3-setuptools all 59.6.0-1.2 [401 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 47.5 MB in 9s (5382 kB/s)
Selecting previously unselected package libpython3.9-minimal:armhf.
(Reading database ... 12608 files and directories currently installed.)
Preparing to unpack .../libpython3.9-minimal_3.9.12-1+rpi1_armhf.deb ...
Unpacking libpython3.9-minimal:armhf (3.9.12-1+rpi1) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../libexpat1_2.4.8-1_armhf.deb ...
Unpacking libexpat1:armhf (2.4.8-1) ...
Preparing to unpack .../zlib1g_1%3a1.2.11.dfsg-4_armhf.deb ...
Unpacking zlib1g:armhf (1:1.2.11.dfsg-4) over (1:1.2.11.dfsg-2) ...
Setting up zlib1g:armhf (1:1.2.11.dfsg-4) ...
Selecting previously unselected package python3.9-minimal.
(Reading database ... 12893 files and directories currently installed.)
Preparing to unpack .../python3.9-minimal_3.9.12-1+rpi1_armhf.deb ...
Unpacking python3.9-minimal (3.9.12-1+rpi1) ...
Setting up libpython3.9-minimal:armhf (3.9.12-1+rpi1) ...
Setting up libexpat1:armhf (2.4.8-1) ...
Setting up python3.9-minimal (3.9.12-1+rpi1) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 12902 files and directories currently installed.)
Preparing to unpack .../0-python3-minimal_3.9.8-1_armhf.deb ...
Unpacking python3-minimal (3.9.8-1) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_7.0.0_all.deb ...
Unpacking media-types (7.0.0) ...
Selecting previously unselected package libmpdec3:armhf.
Preparing to unpack .../2-libmpdec3_2.5.1-2+rpi1_armhf.deb ...
Unpacking libmpdec3:armhf (2.5.1-2+rpi1) ...
Selecting previously unselected package libpython3.9-stdlib:armhf.
Preparing to unpack .../3-libpython3.9-stdlib_3.9.12-1+rpi1_armhf.deb ...
Unpacking libpython3.9-stdlib:armhf (3.9.12-1+rpi1) ...
Selecting previously unselected package python3.9.
Preparing to unpack .../4-python3.9_3.9.12-1+rpi1_armhf.deb ...
Unpacking python3.9 (3.9.12-1+rpi1) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../5-libpython3-stdlib_3.9.8-1_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.9.8-1) ...
Setting up python3-minimal (3.9.8-1) ...
Selecting previously unselected package python3.
(Reading database ... 13300 files and directories currently installed.)
Preparing to unpack .../00-python3_3.9.8-1_armhf.deb ...
Unpacking python3 (3.9.8-1) ...
Selecting previously unselected package libpython3.10-minimal:armhf.
Preparing to unpack .../01-libpython3.10-minimal_3.10.4-1_armhf.deb ...
Unpacking libpython3.10-minimal:armhf (3.10.4-1) ...
Selecting previously unselected package python3.10-minimal.
Preparing to unpack .../02-python3.10-minimal_3.10.4-1_armhf.deb ...
Unpacking python3.10-minimal (3.10.4-1) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../03-libuchardet0_0.0.7-1_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../04-groff-base_1.22.4-8_armhf.deb ...
Unpacking groff-base (1.22.4-8) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../05-bsdextrautils_2.37.3-1_armhf.deb ...
Unpacking bsdextrautils (2.37.3-1) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../06-libpipeline1_1.5.5-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.5-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../07-man-db_2.10.2-1_armhf.deb ...
Unpacking man-db (2.10.2-1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../08-libmagic-mgc_1%3a5.41-2_armhf.deb ...
Unpacking libmagic-mgc (1:5.41-2) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../09-libmagic1_1%3a5.41-2_armhf.deb ...
Unpacking libmagic1:armhf (1:5.41-2) ...
Selecting previously unselected package file.
Preparing to unpack .../10-file_1%3a5.41-2_armhf.deb ...
Unpacking file (1:5.41-2) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../11-gettext-base_0.21-6_armhf.deb ...
Unpacking gettext-base (0.21-6) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../12-libsigsegv2_2.14-1_armhf.deb ...
Unpacking libsigsegv2:armhf (2.14-1) ...
Selecting previously unselected package m4.
Preparing to unpack .../13-m4_1.4.18-5_armhf.deb ...
Unpacking m4 (1.4.18-5) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../14-autoconf_2.71-2_all.deb ...
Unpacking autoconf (2.71-2) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../15-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../16-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../17-autopoint_0.21-6_all.deb ...
Unpacking autopoint (0.21-6) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../18-libdebhelper-perl_13.6_all.deb ...
Unpacking libdebhelper-perl (13.6) ...
Selecting previously unselected package libtool.
Preparing to unpack .../19-libtool_2.4.7-3_all.deb ...
Unpacking libtool (2.4.7-3) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../20-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../21-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../22-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../23-libfile-stripnondeterminism-perl_1.13.0-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.13.0-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../24-dh-strip-nondeterminism_1.13.0-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.13.0-1) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../25-libelf1_0.186-1_armhf.deb ...
Unpacking libelf1:armhf (0.186-1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../26-dwz_0.14-1_armhf.deb ...
Unpacking dwz (0.14-1) ...
Selecting previously unselected package libicu67:armhf.
Preparing to unpack .../27-libicu67_67.1-7_armhf.deb ...
Unpacking libicu67:armhf (67.1-7) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../28-libxml2_2.9.13+dfsg-1_armhf.deb ...
Unpacking libxml2:armhf (2.9.13+dfsg-1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../29-gettext_0.21-6_armhf.deb ...
Unpacking gettext (0.21-6) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../30-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../31-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../32-debhelper_13.6_all.deb ...
Unpacking debhelper (13.6) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../33-python3-lib2to3_3.9.12-1_all.deb ...
Unpacking python3-lib2to3 (3.9.12-1) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../34-python3-distutils_3.9.12-1_all.deb ...
Unpacking python3-distutils (3.9.12-1) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../35-dh-python_5.20220403_all.deb ...
Unpacking dh-python (5.20220403) ...
Selecting previously unselected package gcc-12-base:armhf.
Preparing to unpack .../36-gcc-12-base_12-20220319-1+rpi1_armhf.deb ...
Unpacking gcc-12-base:armhf (12-20220319-1+rpi1) ...
Selecting previously unselected package libbrotli1:armhf.
Preparing to unpack .../37-libbrotli1_1.0.9-2+b1_armhf.deb ...
Unpacking libbrotli1:armhf (1.0.9-2+b1) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../38-libnghttp2-14_1.43.0-1_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.43.0-1) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../39-libpsl5_0.21.0-1.2_armhf.deb ...
Unpacking libpsl5:armhf (0.21.0-1.2) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../40-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../41-libssh2-1_1.10.0-3_armhf.deb ...
Unpacking libssh2-1:armhf (1.10.0-3) ...
Selecting previously unselected package libcurl3-gnutls:armhf.
Preparing to unpack .../42-libcurl3-gnutls_7.82.0-2_armhf.deb ...
Unpacking libcurl3-gnutls:armhf (7.82.0-2) ...
Selecting previously unselected package libbigwig0:armhf.
Preparing to unpack .../43-libbigwig0_0.4.6+dfsg-1_armhf.deb ...
Unpacking libbigwig0:armhf (0.4.6+dfsg-1) ...
Selecting previously unselected package libbigwig-dev:armhf.
Preparing to unpack .../44-libbigwig-dev_0.4.6+dfsg-1_armhf.deb ...
Unpacking libbigwig-dev:armhf (0.4.6+dfsg-1) ...
Selecting previously unselected package libblas3:armhf.
Preparing to unpack .../45-libblas3_3.10.0-2_armhf.deb ...
Unpacking libblas3:armhf (3.10.0-2) ...
Selecting previously unselected package libcurl4-gnutls-dev:armhf.
Preparing to unpack .../46-libcurl4-gnutls-dev_7.82.0-2_armhf.deb ...
Unpacking libcurl4-gnutls-dev:armhf (7.82.0-2) ...
Selecting previously unselected package libexpat1-dev:armhf.
Preparing to unpack .../47-libexpat1-dev_2.4.8-1_armhf.deb ...
Unpacking libexpat1-dev:armhf (2.4.8-1) ...
Selecting previously unselected package libgfortran5:armhf.
Preparing to unpack .../48-libgfortran5_12-20220319-1+rpi1_armhf.deb ...
Unpacking libgfortran5:armhf (12-20220319-1+rpi1) ...
Selecting previously unselected package libjs-jquery.
Preparing to unpack .../49-libjs-jquery_3.6.0+dfsg+~3.5.13-1_all.deb ...
Unpacking libjs-jquery (3.6.0+dfsg+~3.5.13-1) ...
Selecting previously unselected package libjs-underscore.
Preparing to unpack .../50-libjs-underscore_1.13.2~dfsg-2_all.deb ...
Unpacking libjs-underscore (1.13.2~dfsg-2) ...
Selecting previously unselected package libjs-sphinxdoc.
Preparing to unpack .../51-libjs-sphinxdoc_4.5.0-1_all.deb ...
Unpacking libjs-sphinxdoc (4.5.0-1) ...
Selecting previously unselected package liblapack3:armhf.
Preparing to unpack .../52-liblapack3_3.10.0-2_armhf.deb ...
Unpacking liblapack3:armhf (3.10.0-2) ...
Selecting previously unselected package libpython3.9:armhf.
Preparing to unpack .../53-libpython3.9_3.9.12-1+rpi1_armhf.deb ...
Unpacking libpython3.9:armhf (3.9.12-1+rpi1) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../54-zlib1g-dev_1%3a1.2.11.dfsg-4_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-4) ...
Selecting previously unselected package libpython3.9-dev:armhf.
Preparing to unpack .../55-libpython3.9-dev_3.9.12-1+rpi1_armhf.deb ...
Unpacking libpython3.9-dev:armhf (3.9.12-1+rpi1) ...
Selecting previously unselected package libpython3-dev:armhf.
Preparing to unpack .../56-libpython3-dev_3.9.8-1_armhf.deb ...
Unpacking libpython3-dev:armhf (3.9.8-1) ...
Selecting previously unselected package libpython3.10-stdlib:armhf.
Preparing to unpack .../57-libpython3.10-stdlib_3.10.4-1_armhf.deb ...
Unpacking libpython3.10-stdlib:armhf (3.10.4-1) ...
Selecting previously unselected package libpython3.10:armhf.
Preparing to unpack .../58-libpython3.10_3.10.4-1_armhf.deb ...
Unpacking libpython3.10:armhf (3.10.4-1) ...
Selecting previously unselected package libpython3.10-dev:armhf.
Preparing to unpack .../59-libpython3.10-dev_3.10.4-1_armhf.deb ...
Unpacking libpython3.10-dev:armhf (3.10.4-1) ...
Selecting previously unselected package libpython3-all-dev:armhf.
Preparing to unpack .../60-libpython3-all-dev_3.9.8-1_armhf.deb ...
Unpacking libpython3-all-dev:armhf (3.9.8-1) ...
Selecting previously unselected package python3.10.
Preparing to unpack .../61-python3.10_3.10.4-1_armhf.deb ...
Unpacking python3.10 (3.10.4-1) ...
Selecting previously unselected package python3-all.
Preparing to unpack .../62-python3-all_3.9.8-1_armhf.deb ...
Unpacking python3-all (3.9.8-1) ...
Selecting previously unselected package python3.9-dev.
Preparing to unpack .../63-python3.9-dev_3.9.12-1+rpi1_armhf.deb ...
Unpacking python3.9-dev (3.9.12-1+rpi1) ...
Selecting previously unselected package python3-dev.
Preparing to unpack .../64-python3-dev_3.9.8-1_armhf.deb ...
Unpacking python3-dev (3.9.8-1) ...
Selecting previously unselected package python3.10-dev.
Preparing to unpack .../65-python3.10-dev_3.10.4-1_armhf.deb ...
Unpacking python3.10-dev (3.10.4-1) ...
Selecting previously unselected package python3-all-dev.
Preparing to unpack .../66-python3-all-dev_3.9.8-1_armhf.deb ...
Unpacking python3-all-dev (3.9.8-1) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../67-python3-pkg-resources_59.6.0-1.2_all.deb ...
Unpacking python3-pkg-resources (59.6.0-1.2) ...
Selecting previously unselected package python3-numpy.
Preparing to unpack .../68-python3-numpy_1%3a1.21.5-1+b1_armhf.deb ...
Unpacking python3-numpy (1:1.21.5-1+b1) ...
Selecting previously unselected package python3-setuptools.
Preparing to unpack .../69-python3-setuptools_59.6.0-1.2_all.deb ...
Unpacking python3-setuptools (59.6.0-1.2) ...
Selecting previously unselected package sbuild-build-depends-pybigwig-dummy.
Preparing to unpack .../70-sbuild-build-depends-pybigwig-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-pybigwig-dummy (0.invalid.0) ...
Setting up media-types (7.0.0) ...
Setting up libpipeline1:armhf (1.5.5-1) ...
Setting up libpsl5:armhf (0.21.0-1.2) ...
Setting up bsdextrautils (2.37.3-1) ...
Setting up libicu67:armhf (67.1-7) ...
Setting up libmagic-mgc (1:5.41-2) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.6) ...
Setting up libbrotli1:armhf (1.0.9-2+b1) ...
Setting up libnghttp2-14:armhf (1.43.0-1) ...
Setting up libmagic1:armhf (1:5.41-2) ...
Setting up gettext-base (0.21-6) ...
Setting up file (1:5.41-2) ...
Setting up gcc-12-base:armhf (12-20220319-1+rpi1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libblas3:armhf (3.10.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libexpat1-dev:armhf (2.4.8-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libsigsegv2:armhf (2.14-1) ...
Setting up libpython3.10-minimal:armhf (3.10.4-1) ...
Setting up autopoint (0.21-6) ...
Setting up libgfortran5:armhf (12-20220319-1+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-4) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libmpdec3:armhf (2.5.1-2+rpi1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libssh2-1:armhf (1.10.0-3) ...
Setting up libjs-jquery (3.6.0+dfsg+~3.5.13-1) ...
Setting up libelf1:armhf (0.186-1) ...
Setting up libxml2:armhf (2.9.13+dfsg-1) ...
Setting up libpython3.9-stdlib:armhf (3.9.12-1+rpi1) ...
Setting up libpython3-stdlib:armhf (3.9.8-1) ...
Setting up libjs-underscore (1.13.2~dfsg-2) ...
Setting up libfile-stripnondeterminism-perl (1.13.0-1) ...
Setting up liblapack3:armhf (3.10.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up gettext (0.21-6) ...
Setting up libtool (2.4.7-3) ...
Setting up m4 (1.4.18-5) ...
Setting up libcurl3-gnutls:armhf (7.82.0-2) ...
Setting up libbigwig0:armhf (0.4.6+dfsg-1) ...
Setting up libcurl4-gnutls-dev:armhf (7.82.0-2) ...
Setting up python3.10-minimal (3.10.4-1) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libpython3.10-stdlib:armhf (3.10.4-1) ...
Setting up libpython3.9:armhf (3.9.12-1+rpi1) ...
Setting up libjs-sphinxdoc (4.5.0-1) ...
Setting up autoconf (2.71-2) ...
Setting up dh-strip-nondeterminism (1.13.0-1) ...
Setting up dwz (0.14-1) ...
Setting up groff-base (1.22.4-8) ...
Setting up python3.9 (3.9.12-1+rpi1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libpython3.10:armhf (3.10.4-1) ...
Setting up python3.10 (3.10.4-1) ...
Setting up libbigwig-dev:armhf (0.4.6+dfsg-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libpython3.9-dev:armhf (3.9.12-1+rpi1) ...
Setting up python3 (3.9.8-1) ...
Setting up man-db (2.10.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up dh-autoreconf (20) ...
Setting up libpython3.10-dev:armhf (3.10.4-1) ...
Setting up python3.10-dev (3.10.4-1) ...
Setting up python3.9-dev (3.9.12-1+rpi1) ...
Setting up python3-lib2to3 (3.9.12-1) ...
Setting up python3-pkg-resources (59.6.0-1.2) ...
Setting up python3-distutils (3.9.12-1) ...
Setting up dh-python (5.20220403) ...
Setting up libpython3-dev:armhf (3.9.8-1) ...
Setting up python3-setuptools (59.6.0-1.2) ...
Setting up python3-all (3.9.8-1) ...
Setting up debhelper (13.6) ...
Setting up libpython3-all-dev:armhf (3.9.8-1) ...
Setting up python3-dev (3.9.8-1) ...
Setting up python3-numpy (1:1.21.5-1+b1) ...
Setting up python3-all-dev (3.9.8-1) ...
Setting up sbuild-build-depends-pybigwig-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.33-7+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.38-3+rpi1 dpkg-dev_1.21.2+rpi1 g++-11_11.2.0-16+rpi1 gcc-11_11.2.0-16+rpi1 libc6-dev_2.33-7+rpi1 libstdc++-11-dev_11.2.0-16+rpi1 libstdc++6_11.2.0-16+rpi1 linux-libc-dev_5.16.14-1+rpi1
Package versions: adduser_3.120 apt_2.4.3 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-6 autotools-dev_20220109.1 base-files_12.2+rpi1 base-passwd_3.5.52 bash_5.1-6 binutils_2.38-3+rpi1 binutils-arm-linux-gnueabihf_2.38-3+rpi1 binutils-common_2.38-3+rpi1 bsdextrautils_2.37.3-1 bsdutils_1:2.37.3-1 build-essential_12.9 bzip2_1.0.8-5 coreutils_8.32-4.1 cpp_4:11.2.0-2+rpi1 cpp-11_11.2.0-16+rpi1 dash_0.5.11+git20210903+057cd650a4ed-8 debconf_1.5.79 debhelper_13.6 debianutils_5.7-0.1 dh-autoreconf_20 dh-python_5.20220403 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.7-5 dirmngr_2.2.27-3+b1 dpkg_1.21.2+rpi1 dpkg-dev_1.21.2+rpi1 dwz_0.14-1 e2fsprogs_1.46.5-2 fakeroot_1.28-1 file_1:5.41-2 findutils_4.9.0-2 g++_4:11.2.0-2+rpi1 g++-11_11.2.0-16+rpi1 gcc_4:11.2.0-2+rpi1 gcc-11_11.2.0-16+rpi1 gcc-11-base_11.2.0-16+rpi1 gcc-12-base_12-20220319-1+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-6 gettext-base_0.21-6 gnupg_2.2.27-3 gnupg-l10n_2.2.27-3 gnupg-utils_2.2.27-3+b1 gpg_2.2.27-3+b1 gpg-agent_2.2.27-3+b1 gpg-wks-client_2.2.27-3+b1 gpg-wks-server_2.2.27-3+b1 gpgconf_2.2.27-3+b1 gpgsm_2.2.27-3+b1 gpgv_2.2.27-3+b1 grep_3.7-1 groff-base_1.22.4-8 gzip_1.10-4 hostname_3.23 init-system-helpers_1.62 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg6.0_2.4.3 libarchive-zip-perl_1.68-1 libasan6_11.2.0-16+rpi1 libassuan0_2.5.5-1 libatomic1_11.2.0-16+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1 libaudit1_1:3.0.7-1+b1 libbigwig-dev_0.4.6+dfsg-1 libbigwig0_0.4.6+dfsg-1 libbinutils_2.38-3+rpi1 libblas3_3.10.0-2 libblkid1_2.37.3-1 libbrotli1_1.0.9-2+b1 libbz2-1.0_1.0.8-5 libc-bin_2.33-7+rpi1 libc-dev-bin_2.33-7+rpi1 libc6_2.33-7+rpi1 libc6-dev_2.33-7+rpi1 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcc1-0_11.2.0-16+rpi1 libcom-err2_1.46.5-2 libcrypt-dev_1:4.4.27-1.1 libcrypt1_1:4.4.27-1.1 libctf-nobfd0_2.38-3+rpi1 libctf0_2.38-3+rpi1 libcurl3-gnutls_7.82.0-2 libcurl4-gnutls-dev_7.82.0-2 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.261 libdebhelper-perl_13.6 libdpkg-perl_1.21.2+rpi1 libelf1_0.186-1 libexpat1_2.4.8-1 libexpat1-dev_2.4.8-1 libext2fs2_1.46.5-2 libfakeroot_1.28-1 libffi8_3.4.2-4 libfile-stripnondeterminism-perl_1.13.0-1 libgcc-11-dev_11.2.0-16+rpi1 libgcc-s1_11.2.0-16+rpi1 libgcrypt20_1.9.4-5 libgdbm-compat4_1.23-1 libgdbm6_1.23-1 libgfortran5_12-20220319-1+rpi1 libgmp10_2:6.2.1+dfsg-3 libgnutls30_3.7.3-4 libgomp1_11.2.0-16+rpi1 libgpg-error0_1.43-3 libgssapi-krb5-2_1.19.2-2+b1 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libisl23_0.24-2 libjs-jquery_3.6.0+dfsg+~3.5.13-1 libjs-sphinxdoc_4.5.0-1 libjs-underscore_1.13.2~dfsg-2 libk5crypto3_1.19.2-2+b1 libkeyutils1_1.6.1-3+rpi1 libkrb5-3_1.19.2-2+b1 libkrb5support0_1.19.2-2+b1 libksba8_1.6.0-2 liblapack3_3.10.0-2 libldap-2.5-0_2.5.11+dfsg-1+rpi1 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.41-2 libmagic1_1:5.41-2 libmount1_2.37.3-1 libmpc3_1.2.1-1 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libncursesw6_6.3-2 libnettle8_3.7.3-1 libnghttp2-14_1.43.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-6 libpam-modules_1.4.0-11 libpam-modules-bin_1.4.0-11 libpam-runtime_1.4.0-11 libpam0g_1.4.0-11 libpcre2-8-0_10.39-3 libpcre3_2:8.39-13 libperl5.34_5.34.0-3 libpipeline1_1.5.5-1 libpsl5_0.21.0-1.2 libpython3-all-dev_3.9.8-1 libpython3-dev_3.9.8-1 libpython3-stdlib_3.9.8-1 libpython3.10_3.10.4-1 libpython3.10-dev_3.10.4-1 libpython3.10-minimal_3.10.4-1 libpython3.10-stdlib_3.10.4-1 libpython3.9_3.9.12-1+rpi1 libpython3.9-dev_3.9.12-1+rpi1 libpython3.9-minimal_3.9.12-1+rpi1 libpython3.9-stdlib_3.9.12-1+rpi1 libreadline8_8.1.2-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg-2+b1 libsasl2-modules-db_2.1.28+dfsg-2+b1 libseccomp2_2.5.3-2+rpi1 libselinux1_3.3-1 libsemanage-common_3.3-1 libsemanage2_3.3-1 libsepol1_3.1-1 libsepol2_3.3-1 libsigsegv2_2.14-1 libsmartcols1_2.37.3-1 libsqlite3-0_3.38.1-1 libss2_1.46.5-2 libssh2-1_1.10.0-3 libssl1.1_1.1.1n-1 libstdc++-11-dev_11.2.0-16+rpi1 libstdc++6_11.2.0-16+rpi1 libsub-override-perl_0.09-2 libsystemd0_250.4-1+rpi1 libtasn1-6_4.18.0-4 libtinfo6_6.3-2 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.7-3 libubsan1_11.2.0-16+rpi1 libuchardet0_0.0.7-1 libudev1_250.4-1+rpi1 libunistring2_1.0-1 libuuid1_2.37.3-1 libxml2_2.9.13+dfsg-1 libxxhash0_0.8.1-1 libzstd1_1.4.9+dfsg-1+rpi1 linux-libc-dev_5.16.14-1+rpi1 login_1:4.11.1+dfsg1-2 logsave_1.46.5-2 lsb-base_11.1.0+rpi1 m4_1.4.18-5 make_4.3-4.1 man-db_2.10.2-1 mawk_1.3.4.20200120-3 media-types_7.0.0 mount_2.37.3-1 ncurses-base_6.3-2 ncurses-bin_6.3-2 netbase_6.3 passwd_1:4.11.1+dfsg1-2 patch_2.7.6-7 perl_5.34.0-3 perl-base_5.34.0-3 perl-modules-5.34_5.34.0-3 pinentry-curses_1.1.0-4 po-debconf_1.0.21+nmu1 python3_3.9.8-1 python3-all_3.9.8-1 python3-all-dev_3.9.8-1 python3-dev_3.9.8-1 python3-distutils_3.9.12-1 python3-lib2to3_3.9.12-1 python3-minimal_3.9.8-1 python3-numpy_1:1.21.5-1+b1 python3-pkg-resources_59.6.0-1.2 python3-setuptools_59.6.0-1.2 python3.10_3.10.4-1 python3.10-dev_3.10.4-1 python3.10-minimal_3.10.4-1 python3.9_3.9.12-1+rpi1 python3.9-dev_3.9.12-1+rpi1 python3.9-minimal_3.9.12-1+rpi1 raspbian-archive-keyring_20120528.2 readline-common_8.1.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-pybigwig-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.01-1 tar_1.34+dfsg-1 tzdata_2021e-1 util-linux_2.37.3-1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-4 zlib1g-dev_1:1.2.11.dfsg-4
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.ZbUHrgPj/trustedkeys.kbx': General error
gpgv: Signature made Thu Feb 17 15:35:18 2022 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./pybigwig_0.3.18+dfsg-1.dsc
dpkg-source: info: extracting pybigwig in /<<BUILDDIR>>/pybigwig-0.3.18+dfsg
dpkg-source: info: unpacking pybigwig_0.3.18+dfsg.orig.tar.gz
dpkg-source: info: unpacking pybigwig_0.3.18+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying prepareForExternalLibBigWig.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-03d8b7ec-b470-407b-af59-bebd7dc2e1dd
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package pybigwig
dpkg-buildpackage: info: source version 0.3.18+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
dpkg-source: info: using options from pybigwig-0.3.18+dfsg/debian/source/options: --extend-diff-ignore=^(.*\.egg-info/)
debian/rules clean
dh clean --with python3 --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:239: python3.10 setup.py clean
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/usr/lib/python3.10/distutils/dist.py:274: UserWarning: Unknown distribution option: 'classifier'
warnings.warn(msg)
running clean
removing '/<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.10' does not exist -- can't clean it
I: pybuild base:239: python3.9 setup.py clean
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'classifier'
warnings.warn(msg)
running clean
removing '/<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.9' does not exist -- can't clean it
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:239: python3.10 setup.py config
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/usr/lib/python3.10/distutils/dist.py:274: UserWarning: Unknown distribution option: 'classifier'
warnings.warn(msg)
running config
I: pybuild base:239: python3.9 setup.py config
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'classifier'
warnings.warn(msg)
running config
dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:239: /usr/bin/python3.10 setup.py build
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/usr/lib/python3.10/distutils/dist.py:274: UserWarning: Unknown distribution option: 'classifier'
warnings.warn(msg)
running build
running build_py
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWigTest
copying pyBigWigTest/__init__.py -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWigTest
copying pyBigWigTest/test.py -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWigTest
running egg_info
creating pyBigWig.egg-info
writing pyBigWig.egg-info/PKG-INFO
writing dependency_links to pyBigWig.egg-info/dependency_links.txt
writing requirements to pyBigWig.egg-info/requires.txt
writing top-level names to pyBigWig.egg-info/top_level.txt
writing manifest file 'pyBigWig.egg-info/SOURCES.txt'
reading manifest file 'pyBigWig.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'libBigWig/*'
adding license file 'LICENSE.txt'
writing manifest file 'pyBigWig.egg-info/SOURCES.txt'
copying pyBigWigTest/test.bigBed -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWigTest
copying pyBigWigTest/test.bw -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWigTest
running build_ext
building 'pyBigWig' extension
Warning: Can't read registry to find the necessary compiler setting
Make sure that Python modules winreg, win32api or win32con are installed.
C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/pybigwig-0.3.18+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build
creating build/temp.linux-armhf-3.10
compile options: '-DWITHNUMPY -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -IlibBigWig -I/usr/include/python3.10 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c'
arm-linux-gnueabihf-gcc: pyBigWig.c
pyBigWig.c: In function 'PyString_AsString':
pyBigWig.c:773:12: warning: return discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
773 | return PyUnicode_AsUTF8(obj);
| ^~~~~~~~~~~~~~~~~~~~~
pyBigWig.c: In function 'Numeric2Uint':
pyBigWig.c:798:10: warning: comparison of integer expressions of different signedness: 'long int' and 'unsigned int' [-Wsign-compare]
798 | if(l > 0xFFFFFFFF) {
| ^
pyBigWig.c: In function 'pyBwAddHeader':
pyBigWig.c:883:20: warning: comparison of integer expressions of different signedness: 'long int' and 'unsigned int' [-Wsign-compare]
883 | if(zoomTmp > 0xFFFFFFFF) {
| ^
pyBigWig.c: In function 'PyAddIntervals':
pyBigWig.c:1257:19: warning: comparison of integer expressions of different signedness: 'Py_ssize_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
1257 | for(i=0; i<n; i++) free(cchroms[i]);
| ^
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/pybigwig-0.3.18+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.10/pyBigWig.o -L/usr/lib/python3/dist-packages/numpy/core/lib -L/usr/lib/python3.10/config-3.10-arm-linux-gnueabihf -lBigWig -lm -lz -lpython3.10 -lcurl -lnpymath -lm -o /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWig.cpython-310-arm-linux-gnueabihf.so
I: pybuild base:239: /usr/bin/python3 setup.py build
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'classifier'
warnings.warn(msg)
running build
running build_py
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWigTest
copying pyBigWigTest/__init__.py -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWigTest
copying pyBigWigTest/test.py -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWigTest
running egg_info
writing pyBigWig.egg-info/PKG-INFO
writing dependency_links to pyBigWig.egg-info/dependency_links.txt
writing requirements to pyBigWig.egg-info/requires.txt
writing top-level names to pyBigWig.egg-info/top_level.txt
reading manifest file 'pyBigWig.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'libBigWig/*'
adding license file 'LICENSE.txt'
writing manifest file 'pyBigWig.egg-info/SOURCES.txt'
copying pyBigWigTest/test.bigBed -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWigTest
copying pyBigWigTest/test.bw -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWigTest
running build_ext
building 'pyBigWig' extension
Warning: Can't read registry to find the necessary compiler setting
Make sure that Python modules winreg, win32api or win32con are installed.
C compiler: arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/pybigwig-0.3.18+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC
creating build/temp.linux-armhf-3.9
compile options: '-DWITHNUMPY -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -IlibBigWig -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c'
arm-linux-gnueabihf-gcc: pyBigWig.c
pyBigWig.c: In function 'PyString_AsString':
pyBigWig.c:773:12: warning: return discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
773 | return PyUnicode_AsUTF8(obj);
| ^~~~~~~~~~~~~~~~~~~~~
pyBigWig.c: In function 'Numeric2Uint':
pyBigWig.c:798:10: warning: comparison of integer expressions of different signedness: 'long int' and 'unsigned int' [-Wsign-compare]
798 | if(l > 0xFFFFFFFF) {
| ^
pyBigWig.c: In function 'pyBwAddHeader':
pyBigWig.c:883:20: warning: comparison of integer expressions of different signedness: 'long int' and 'unsigned int' [-Wsign-compare]
883 | if(zoomTmp > 0xFFFFFFFF) {
| ^
pyBigWig.c: In function 'PyAddIntervals':
pyBigWig.c:1257:19: warning: comparison of integer expressions of different signedness: 'Py_ssize_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
1257 | for(i=0; i<n; i++) free(cchroms[i]);
| ^
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/pybigwig-0.3.18+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/pyBigWig.o -L/usr/lib/python3/dist-packages/numpy/core/lib -L/usr/lib/python3.9/config-3.9-arm-linux-gnueabihf -lBigWig -lm -lz -lpython3.9 -lcurl -lnpymath -lm -o /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWig.cpython-39-arm-linux-gnueabihf.so
dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:239: cd /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build; python3.10 -m unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
OK
I: pybuild base:239: cd /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build; python3.9 -m unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
OK
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/pybigwig-0.3.18+dfsg'
dh_auto_install
I: pybuild base:239: /usr/bin/python3.10 setup.py install --root /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/usr/lib/python3.10/distutils/dist.py:274: UserWarning: Unknown distribution option: 'classifier'
warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
warnings.warn(
running build
running build_py
running egg_info
writing pyBigWig.egg-info/PKG-INFO
writing dependency_links to pyBigWig.egg-info/dependency_links.txt
writing requirements to pyBigWig.egg-info/requires.txt
writing top-level names to pyBigWig.egg-info/top_level.txt
reading manifest file 'pyBigWig.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'libBigWig/*'
adding license file 'LICENSE.txt'
writing manifest file 'pyBigWig.egg-info/SOURCES.txt'
running build_ext
running install_lib
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages/pyBigWigTest
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWigTest/__init__.py -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages/pyBigWigTest
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWigTest/test.py -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages/pyBigWigTest
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWigTest/test.bigBed -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages/pyBigWigTest
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWigTest/test.bw -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages/pyBigWigTest
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages/pyBigWigTest/__pycache__
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWigTest/__pycache__/__init__.cpython-310.pyc -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages/pyBigWigTest/__pycache__
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWigTest/__pycache__/test.cpython-310.pyc -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages/pyBigWigTest/__pycache__
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.10_pybigwig/build/pyBigWig.cpython-310-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages
byte-compiling /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages/pyBigWigTest/__init__.py to __init__.cpython-310.pyc
byte-compiling /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages/pyBigWigTest/test.py to test.cpython-310.pyc
running install_egg_info
Copying pyBigWig.egg-info to /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.10/dist-packages/pyBigWig-0.3.18.egg-info
Skipping SOURCES.txt
running install_scripts
I: pybuild base:239: /usr/bin/python3 setup.py install --root /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/usr/lib/python3.9/distutils/dist.py:274: UserWarning: Unknown distribution option: 'classifier'
warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
warnings.warn(
running build
running build_py
running egg_info
writing pyBigWig.egg-info/PKG-INFO
writing dependency_links to pyBigWig.egg-info/dependency_links.txt
writing requirements to pyBigWig.egg-info/requires.txt
writing top-level names to pyBigWig.egg-info/top_level.txt
reading manifest file 'pyBigWig.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'libBigWig/*'
adding license file 'LICENSE.txt'
writing manifest file 'pyBigWig.egg-info/SOURCES.txt'
running build_ext
running install_lib
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages/pyBigWigTest
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWigTest/__init__.py -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages/pyBigWigTest
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWigTest/test.py -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages/pyBigWigTest
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWigTest/test.bigBed -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages/pyBigWigTest
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWigTest/test.bw -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages/pyBigWigTest
creating /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages/pyBigWigTest/__pycache__
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWigTest/__pycache__/__init__.cpython-39.pyc -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages/pyBigWigTest/__pycache__
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWigTest/__pycache__/test.cpython-39.pyc -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages/pyBigWigTest/__pycache__
copying /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/.pybuild/cpython3_3.9_pybigwig/build/pyBigWig.cpython-39-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages
byte-compiling /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages/pyBigWigTest/__init__.py to __init__.cpython-39.pyc
byte-compiling /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages/pyBigWigTest/test.py to test.cpython-39.pyc
running install_egg_info
Copying pyBigWig.egg-info to /<<BUILDDIR>>/pybigwig-0.3.18+dfsg/debian/python3-pybigwig/usr/lib/python3.9/dist-packages/pyBigWig-0.3.18.egg-info
Skipping SOURCES.txt
running install_scripts
dh_numpy3
make[1]: Leaving directory '/<<BUILDDIR>>/pybigwig-0.3.18+dfsg'
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_python3 -a -O--buildsystem=pybuild
I: dh_python3 pydist:467: Skipping section [numpy input], unable to parse header
dh_installsystemduser -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: package python3-pybigwig: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-pybigwig: substitution variable ${python3:Versions} unused, but is defined
dpkg-gencontrol: warning: package python3-pybigwig: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-pybigwig: substitution variable ${python3:Versions} unused, but is defined
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'python3-pybigwig' in '../python3-pybigwig_0.3.18+dfsg-1_armhf.deb'.
dpkg-deb: building package 'python3-pybigwig-dbgsym' in '../python3-pybigwig-dbgsym_0.3.18+dfsg-1_armhf.deb'.
dpkg-genbuildinfo --build=any -O../pybigwig_0.3.18+dfsg-1_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> -O../pybigwig_0.3.18+dfsg-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-source: info: using options from pybigwig-0.3.18+dfsg/debian/source/options: --extend-diff-ignore=^(.*\.egg-info/)
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2022-04-13T12:36:32Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
pybigwig_0.3.18+dfsg-1_armhf.changes:
-------------------------------------
Format: 1.8
Date: Thu, 17 Feb 2022 16:32:40 +0100
Source: pybigwig
Binary: python3-pybigwig python3-pybigwig-dbgsym
Architecture: armhf
Version: 0.3.18+dfsg-1
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
python3-pybigwig - Python 3 module for quick access to bigBed and bigWig files
Changes:
pybigwig (0.3.18+dfsg-1) unstable; urgency=medium
.
* Team upload.
* d/watch: drop uupdate
* Standards-Version: 4.6.0 (routine-update)
* debhelper-compat 13 (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
Repository-Browse.
Checksums-Sha1:
f054979142c3f1a2821cfd1656e3314453248b48 6949 pybigwig_0.3.18+dfsg-1_armhf.buildinfo
eff8d7eb2867ed533dad8181669c47e309e22b42 88528 python3-pybigwig-dbgsym_0.3.18+dfsg-1_armhf.deb
fd51826d1f1d42f7926910430fbc4d7e4af0e244 35120 python3-pybigwig_0.3.18+dfsg-1_armhf.deb
Checksums-Sha256:
adad874fd473bc2c679d4936cbb1c46e5ffac609c5573070eda382344422ec7e 6949 pybigwig_0.3.18+dfsg-1_armhf.buildinfo
681348d798b964c9e7661ce81338d62f0aa52fba4f7520a1d25511d1e8f4df09 88528 python3-pybigwig-dbgsym_0.3.18+dfsg-1_armhf.deb
24449e8cba4f76a6269b6355a0f7803fee066c048bae57cf63a563f72d73c06b 35120 python3-pybigwig_0.3.18+dfsg-1_armhf.deb
Files:
ec8b5a506efa4efd9940d7349284d5c9 6949 science optional pybigwig_0.3.18+dfsg-1_armhf.buildinfo
1d0fce981e3ec1c215e73ca213793ce2 88528 debug optional python3-pybigwig-dbgsym_0.3.18+dfsg-1_armhf.deb
f6ddb86e4e0eb1a16feffbff880b6b2b 35120 science optional python3-pybigwig_0.3.18+dfsg-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
python3-pybigwig-dbgsym_0.3.18+dfsg-1_armhf.deb
-----------------------------------------------
new Debian package, version 2.0.
size 88528 bytes: control archive=660 bytes.
451 bytes, 12 lines control
308 bytes, 3 lines md5sums
Package: python3-pybigwig-dbgsym
Source: pybigwig
Version: 0.3.18+dfsg-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 132
Depends: python3-pybigwig (= 0.3.18+dfsg-1)
Section: debug
Priority: optional
Description: debug symbols for python3-pybigwig
Build-Ids: bdda91cf29f912c1c0c80cfe9b28afb84da82aaf c6ca1e4be7924cc2d98ffac2bc2788db55310300
drwxr-xr-x root/root 0 2022-02-17 15:32 ./
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/debug/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/debug/.build-id/bd/
-rw-r--r-- root/root 56380 2022-02-17 15:32 ./usr/lib/debug/.build-id/bd/da91cf29f912c1c0c80cfe9b28afb84da82aaf.debug
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/debug/.build-id/c6/
-rw-r--r-- root/root 55756 2022-02-17 15:32 ./usr/lib/debug/.build-id/c6/ca1e4be7924cc2d98ffac2bc2788db55310300.debug
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 7416 2022-02-17 15:32 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-pybigwig.debug
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/share/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/share/doc/
lrwxrwxrwx root/root 0 2022-02-17 15:32 ./usr/share/doc/python3-pybigwig-dbgsym -> python3-pybigwig
python3-pybigwig_0.3.18+dfsg-1_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 35120 bytes: control archive=1948 bytes.
1825 bytes, 31 lines control
1136 bytes, 12 lines md5sums
279 bytes, 12 lines * postinst #!/bin/sh
423 bytes, 12 lines * prerm #!/bin/sh
Package: python3-pybigwig
Source: pybigwig
Version: 0.3.18+dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 207
Depends: python3-numpy (>= 1:1.20.0), python3-numpy-abi9, python3 (<< 3.11), python3 (>= 3.9~), python3:any, libbigwig0 (>= 0.4.6+dfsg), libc6 (>= 2.29), libpython3.10 (>= 3.10.0), libpython3.9 (>= 3.9.1)
Section: science
Priority: optional
Homepage: https://github.com/dpryan79/pyBigWig
Description: Python 3 module for quick access to bigBed and bigWig files
This is a Python extension, written in C, for quick access to bigBed files,
and access to and creation of bigWig files.
.
The bigWig format was originally created in the context of genome
browsers. There, computing exact summary statistics for a given interval
is less important than quickly being able to compute an approximate
statistic. Because of this, bigWig files contain not only interval-value
associations, but also `sum of values`/`sum of squared values`/`minimum
value`/`maximum value`/`number of bases covered` for equally sized
bins of various sizes. These different sizes are referred to as "zoom
levels". The smallest zoom level has bins that are 16 times the mean
interval size in the file and each subsequent zoom level has bins 4 times
larger than the previous. This methodology is used in Kent's tools and,
therefore, likely used in almost every currently existing bigWig file.
.
When a bigWig file is queried for a summary statistic, the size of the
interval is used to determine whether to use a zoom level and, if so,
which one. The optimal zoom level is that which has the largest bins no
more than half the width of the desired interval. If no such zoom level
exists, the original intervals are instead used for the calculation.
drwxr-xr-x root/root 0 2022-02-17 15:32 ./
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/python3/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/python3/dist-packages/pyBigWig-0.3.18.egg-info/
-rw-r--r-- root/root 427 2022-02-17 15:32 ./usr/lib/python3/dist-packages/pyBigWig-0.3.18.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2022-02-17 15:32 ./usr/lib/python3/dist-packages/pyBigWig-0.3.18.egg-info/dependency_links.txt
-rw-r--r-- root/root 21 2022-02-17 15:32 ./usr/lib/python3/dist-packages/pyBigWig-0.3.18.egg-info/requires.txt
-rw-r--r-- root/root 22 2022-02-17 15:32 ./usr/lib/python3/dist-packages/pyBigWig-0.3.18.egg-info/top_level.txt
-rw-r--r-- root/root 67672 2022-02-17 15:32 ./usr/lib/python3/dist-packages/pyBigWig.cpython-310-arm-linux-gnueabihf.so
-rw-r--r-- root/root 67672 2022-02-17 15:32 ./usr/lib/python3/dist-packages/pyBigWig.cpython-39-arm-linux-gnueabihf.so
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/lib/python3/dist-packages/pyBigWigTest/
-rw-r--r-- root/root 0 2021-02-07 12:44 ./usr/lib/python3/dist-packages/pyBigWigTest/__init__.py
-rw-r--r-- root/root 27148 2021-02-07 12:44 ./usr/lib/python3/dist-packages/pyBigWigTest/test.bigBed
-rw-r--r-- root/root 12966 2021-02-07 12:44 ./usr/lib/python3/dist-packages/pyBigWigTest/test.bw
-rw-r--r-- root/root 13205 2021-02-07 12:44 ./usr/lib/python3/dist-packages/pyBigWigTest/test.py
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/share/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/share/doc/
drwxr-xr-x root/root 0 2022-02-17 15:32 ./usr/share/doc/python3-pybigwig/
-rw-r--r-- root/root 857 2022-02-17 15:32 ./usr/share/doc/python3-pybigwig/changelog.Debian.gz
-rw-r--r-- root/root 1461 2022-02-17 15:32 ./usr/share/doc/python3-pybigwig/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 1660
Build-Time: 102
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 657
Job: pybigwig_0.3.18+dfsg-1
Machine Architecture: armhf
Package: pybigwig
Package-Time: 814
Source-Version: 0.3.18+dfsg-1
Space: 1660
Status: successful
Version: 0.3.18+dfsg-1
--------------------------------------------------------------------------------
Finished at 2022-04-13T12:36:32Z
Build needed 00:13:34, 1660k disc space