plast →
2.3.2+dfsg-10 →
armhf → 2022-12-08 09:27:27
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-02
+==============================================================================+
| plast 2.3.2+dfsg-10 (armhf) Thu, 08 Dec 2022 08:32:45 +0000 |
+==============================================================================+
Package: plast
Version: 2.3.2+dfsg-10
Source Version: 2.3.2+dfsg-10
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-6dcfe0d7-afb1-48be-9055-acaea4f2e59c' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.5 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.3 MB]
Fetched 27.8 MB in 30s (933 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'plast' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/plast.git
Please use:
git clone https://salsa.debian.org/med-team/plast.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 5750 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main plast 2.3.2+dfsg-10 (dsc) [2072 B]
Get:2 http://172.17.4.1/private bookworm-staging/main plast 2.3.2+dfsg-10 (tar) [5726 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main plast 2.3.2+dfsg-10 (diff) [21.1 kB]
Fetched 5750 kB in 1s (9276 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/plast-EIOYpr/plast-2.3.2+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/plast-EIOYpr' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-5hnhnF/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-5hnhnF/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-5hnhnF/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ Packages [434 B]
Fetched 2110 B in 1s (2516 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libldap-common libpam-cap libperl5.34 netbase perl-modules-5.34
sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 83 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (19.7 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15027 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), cmake, libpcre2-dev, default-jdk, libsimde-dev
Filtered Build-Depends: debhelper-compat (= 13), cmake, libpcre2-dev, default-jdk, libsimde-dev
dpkg-deb: building package 'sbuild-build-depends-plast-dummy' in '/<<BUILDDIR>>/resolver-5hnhnF/apt_archive/sbuild-build-depends-plast-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-plast-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ Sources [520 B]
Get:5 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ Packages [601 B]
Fetched 2454 B in 1s (3157 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install plast build dependencies (apt-based resolver)
-----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libldap-common libpam-cap libperl5.34 netbase perl-modules-5.34
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
adwaita-icon-theme at-spi2-common autoconf automake autopoint autotools-dev
bsdextrautils bsdutils ca-certificates ca-certificates-java cmake cmake-data
cpp-12 debhelper default-jdk default-jdk-headless default-jre
default-jre-headless dh-autoreconf dh-strip-nondeterminism dwz file
fontconfig fontconfig-config fonts-dejavu-core g++-12 gcc-12 gcc-12-base
gettext gettext-base groff-base gtk-update-icon-cache hicolor-icon-theme
intltool-debian java-common libarchive-zip-perl libarchive13 libasan8
libasound2 libasound2-data libatk1.0-0 libatomic1 libavahi-client3
libavahi-common-data libavahi-common3 libblkid1 libbrotli1 libbsd0 libcairo2
libcc1-0 libcups2 libcurl4 libdatrie1 libdbus-1-3 libdebhelper-perl
libdeflate0 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1
libdrm2 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl
libfontconfig1 libfreetype6 libfribidi0 libgcc-12-dev libgcc-s1
libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1 libgl1-mesa-dri
libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgomp1
libgraphite2-3 libgtk2.0-0 libgtk2.0-common libharfbuzz0b libicu72 libjbig0
libjpeg62-turbo libjsoncpp25 liblcms2-2 liblerc4 libllvm14 libmagic-mgc
libmagic1 libmd0 libmount1 libncurses6 libnghttp2-14 libnspr4 libnss3
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpcre2-16-0
libpcre2-32-0 libpcre2-8-0 libpcre2-dev libpcre2-posix3 libpcsclite1
libpipeline1 libpixman-1-0 libpng16-16 libprocps8 libpsl5 librhash0 librtmp1
libsensors-config libsensors5 libsimde-dev libsmartcols1 libssh2-1 libssl3
libstdc++-12-dev libstdc++6 libsub-override-perl libthai-data libthai0
libtiff5 libtool libubsan1 libuchardet0 libuuid1 libuv1 libwebp7 libx11-6
libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0
libxcb-present0 libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0
libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3
libxi6 libxinerama1 libxml2 libxrandr2 libxrender1 libxshmfence1 libxtst6
libxxf86vm1 libz3-4 m4 man-db mount openjdk-17-jdk openjdk-17-jdk-headless
openjdk-17-jre openjdk-17-jre-headless openssl po-debconf procps
shared-mime-info ucf util-linux util-linux-extra x11-common
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cmake-doc cmake-format
elpa-cmake-mode ninja-build gcc-12-locales cpp-12-doc dh-make gcc-12-doc
gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libasound2-plugins
alsa-utils cups-common low-memory-monitor gvfs liblcms2-utils cryptsetup-bin
pcscd lm-sensors libstdc++-12-doc libtool-doc gfortran | fortran95-compiler
gcj-jdk m4-doc apparmor less www-browser nfs-common openjdk-17-demo
openjdk-17-source visualvm libnss-mdns fonts-dejavu-extra
fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei
| fonts-wqy-zenhei fonts-indic libmail-box-perl dosfstools kbd
util-linux-locales
Recommended packages:
librsvg2-common curl | wget | lynx alsa-ucm-conf alsa-topology-conf dbus
libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs
libgail-common libgtk2.0-bin libgpm2 publicsuffix libltdl-dev uuid-runtime
libxt-dev libatk-wrapper-java-jni fonts-dejavu-extra libmail-sendmail-perl
psmisc
The following NEW packages will be installed:
adwaita-icon-theme at-spi2-common autoconf automake autopoint autotools-dev
bsdextrautils ca-certificates ca-certificates-java cmake cmake-data
debhelper default-jdk default-jdk-headless default-jre default-jre-headless
dh-autoreconf dh-strip-nondeterminism dwz file fontconfig fontconfig-config
fonts-dejavu-core gettext gettext-base groff-base gtk-update-icon-cache
hicolor-icon-theme intltool-debian java-common libarchive-zip-perl
libarchive13 libasound2 libasound2-data libatk1.0-0 libavahi-client3
libavahi-common-data libavahi-common3 libbrotli1 libbsd0 libcairo2 libcups2
libcurl4 libdatrie1 libdbus-1-3 libdebhelper-perl libdeflate0 libdrm-amdgpu1
libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1
libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6
libfribidi0 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgif7 libgl1
libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0
libgraphite2-3 libgtk2.0-0 libgtk2.0-common libharfbuzz0b libicu72 libjbig0
libjpeg62-turbo libjsoncpp25 liblcms2-2 liblerc4 libllvm14 libmagic-mgc
libmagic1 libmd0 libncurses6 libnghttp2-14 libnspr4 libnss3 libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpcre2-16-0 libpcre2-32-0
libpcre2-dev libpcre2-posix3 libpcsclite1 libpipeline1 libpixman-1-0
libpng16-16 libprocps8 libpsl5 librhash0 librtmp1 libsensors-config
libsensors5 libsimde-dev libssh2-1 libsub-override-perl libthai-data
libthai0 libtiff5 libtool libuchardet0 libuv1 libwebp7 libx11-6 libx11-data
libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0
libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1
libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6
libxinerama1 libxml2 libxrandr2 libxrender1 libxshmfence1 libxtst6
libxxf86vm1 libz3-4 m4 man-db openjdk-17-jdk openjdk-17-jdk-headless
openjdk-17-jre openjdk-17-jre-headless openssl po-debconf procps
sbuild-build-depends-plast-dummy shared-mime-info ucf x11-common
The following packages will be upgraded:
bsdutils cpp-12 g++-12 gcc-12 gcc-12-base libasan8 libatomic1 libblkid1
libcc1-0 libgcc-12-dev libgcc-s1 libgomp1 libmount1 libpcre2-8-0
libsmartcols1 libssl3 libstdc++-12-dev libstdc++6 libubsan1 libuuid1 mount
util-linux util-linux-extra
23 upgraded, 155 newly installed, 0 to remove and 60 not upgraded.
Need to get 429 MB of archives.
After this operation, 805 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-5hnhnF/apt_archive ./ sbuild-build-depends-plast-dummy 0.invalid.0 [888 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf bsdutils armhf 1:2.38.1-4 [83.9 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libsmartcols1 armhf 2.38.1-4 [91.6 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf util-linux-extra armhf 2.38.1-4 [98.1 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf util-linux armhf 2.38.1-4 [1062 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf mount armhf 2.38.1-4 [126 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libcc1-0 armhf 12.2.0-9+rpi1 [32.2 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libgomp1 armhf 12.2.0-9+rpi1 [95.4 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libatomic1 armhf 12.2.0-9+rpi1 [8224 B]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf libasan8 armhf 12.2.0-9+rpi1 [2089 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libubsan1 armhf 12.2.0-9+rpi1 [861 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf gcc-12-base armhf 12.2.0-9+rpi1 [37.2 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf libstdc++6 armhf 12.2.0-9+rpi1 [504 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf g++-12 armhf 12.2.0-9+rpi1 [7913 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf libstdc++-12-dev armhf 12.2.0-9+rpi1 [2025 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf libgcc-12-dev armhf 12.2.0-9+rpi1 [725 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf gcc-12 armhf 12.2.0-9+rpi1 [14.2 MB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf cpp-12 armhf 12.2.0-9+rpi1 [7156 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf libgcc-s1 armhf 12.2.0-9+rpi1 [36.1 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libblkid1 armhf 2.38.1-4 [131 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libmount1 armhf 2.38.1-4 [144 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-8-0 armhf 10.40-2 [222 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf libuuid1 armhf 2.38.1-4 [27.1 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-9 [774 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-4 [78.8 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.1-1 [1341 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf libncurses6 armhf 6.3+20220423-2 [79.6 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf libprocps8 armhf 2:3.3.17-7.1 [41.9 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf procps armhf 2:3.3.17-7.1 [457 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf libssl3 armhf 3.0.7-1 [1614 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf openssl armhf 3.0.7-1 [1349 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates all 20211016 [156 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-4 [295 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-4 [120 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-4 [65.8 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-10 [156 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf libgdk-pixbuf2.0-common all 2.42.10+dfsg-1 [306 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-0 armhf 2.74.1-2 [1214 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1 [570 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf shared-mime-info armhf 2.2-1 [726 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf libjpeg62-turbo armhf 1:2.1.2-1 [144 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf libpng16-16 armhf 1.6.39-2 [258 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf libdeflate0 armhf 1.14-1 [50.9 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf liblerc4 armhf 4.0.0+ds-2 [133 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf libwebp7 armhf 1.2.2-2+b1 [237 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf libtiff5 armhf 4.4.0-6 [278 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf libgdk-pixbuf-2.0-0 armhf 2.42.10+dfsg-1 [123 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf gtk-update-icon-cache armhf 3.24.35-2 [41.3 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf adwaita-icon-theme all 43-1 [5124 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf at-spi2-common all 2.46.0-4 [161 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-1 [260 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-10 [495 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates-java all 20220719 [16.1 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf libarchive13 armhf 3.6.0-1 [306 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b2 [260 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf libnghttp2-14 armhf 1.50.0-1 [65.0 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf libpsl5 armhf 0.21.0-1.2 [56.2 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf libssh2-1 armhf 1.10.0-3+b1 [161 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf libcurl4 armhf 7.86.0-2 [322 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf libjsoncpp25 armhf 1.9.5-4 [66.7 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf librhash0 armhf 1.4.3-3 [142 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf libuv1 armhf 1.44.2-1+rpi1 [125 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf cmake-data all 3.25.1-1 [2026 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf cmake armhf 3.25.1-1 [3859 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.11.1 [80.8 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-5 [517 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-2 [19.4 kB]
Get:82 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-2 [8556 B]
Get:83 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:84 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14+20220924-2 [93.1 kB]
Get:85 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-10 [1203 kB]
Get:86 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:87 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:88 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.11.1 [941 kB]
Get:89 http://172.17.4.1/private bookworm-staging/main armhf java-common all 0.73 [6268 B]
Get:90 http://172.17.4.1/private bookworm-staging/main armhf libavahi-common-data armhf 0.8-6+b1 [124 kB]
Get:91 http://172.17.4.1/private bookworm-staging/main armhf libavahi-common3 armhf 0.8-6+b1 [55.8 kB]
Get:92 http://172.17.4.1/private bookworm-staging/main armhf libdbus-1-3 armhf 1.14.4-1 [211 kB]
Get:93 http://172.17.4.1/private bookworm-staging/main armhf libavahi-client3 armhf 0.8-6+b1 [58.5 kB]
Get:94 http://172.17.4.1/private bookworm-staging/main armhf libcups2 armhf 2.4.2-1+b1 [311 kB]
Get:95 http://172.17.4.1/private bookworm-staging/main armhf liblcms2-2 armhf 2.13.1-1 [125 kB]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf libfreetype6 armhf 2.12.1+dfsg-3 [352 kB]
Ign:96 http://172.17.4.1/private bookworm-staging/main armhf libfreetype6 armhf 2.12.1+dfsg-3
Get:97 http://172.17.4.1/private bookworm-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:98 http://172.17.4.1/private bookworm-staging/main armhf fontconfig-config armhf 2.13.1-4.5 [281 kB]
Get:99 http://172.17.4.1/private bookworm-staging/main armhf libfontconfig1 armhf 2.13.1-4.5 [330 kB]
Get:100 http://172.17.4.1/private bookworm-staging/main armhf libnspr4 armhf 2:4.35-1 [90.9 kB]
Get:101 http://172.17.4.1/private bookworm-staging/main armhf libnss3 armhf 2:3.85-1 [1094 kB]
Get:102 http://172.17.4.1/private bookworm-staging/main armhf libasound2-data all 1.2.8-1 [20.5 kB]
Get:103 http://172.17.4.1/private bookworm-staging/main armhf libasound2 armhf 1.2.8-1 [304 kB]
Get:104 http://172.17.4.1/private bookworm-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:105 http://172.17.4.1/private bookworm-staging/main armhf libharfbuzz0b armhf 5.2.0-2+b1 [1832 kB]
Get:106 http://172.17.4.1/private bookworm-staging/main armhf libpcsclite1 armhf 1.9.9-1 [58.1 kB]
Get:107 http://172.17.4.1/private bookworm-staging/main armhf openjdk-17-jre-headless armhf 17.0.4+8-1+rpi1 [40.1 MB]
Get:108 http://172.17.4.1/private bookworm-staging/main armhf default-jre-headless armhf 2:1.17-73 [2812 B]
Get:109 http://172.17.4.1/private bookworm-staging/main armhf libgtk2.0-common all 2.24.33-2 [2700 kB]
Get:110 http://172.17.4.1/private bookworm-staging/main armhf libatk1.0-0 armhf 2.46.0-4 [41.4 kB]
Get:111 http://172.17.4.1/private bookworm-staging/main armhf libpixman-1-0 armhf 0.42.2-1 [461 kB]
Get:112 http://172.17.4.1/private bookworm-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:113 http://172.17.4.1/private bookworm-staging/main armhf libmd0 armhf 1.0.4-2 [28.6 kB]
Get:114 http://172.17.4.1/private bookworm-staging/main armhf libbsd0 armhf 0.11.7-1 [112 kB]
Get:115 http://172.17.4.1/private bookworm-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:116 http://172.17.4.1/private bookworm-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:117 http://172.17.4.1/private bookworm-staging/main armhf libx11-data all 2:1.8.1-2 [308 kB]
Get:118 http://172.17.4.1/private bookworm-staging/main armhf libx11-6 armhf 2:1.8.1-2 [704 kB]
Get:119 http://172.17.4.1/private bookworm-staging/main armhf libxcb-render0 armhf 1.15-1 [114 kB]
Get:120 http://172.17.4.1/private bookworm-staging/main armhf libxcb-shm0 armhf 1.15-1 [106 kB]
Get:121 http://172.17.4.1/private bookworm-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:122 http://172.17.4.1/private bookworm-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:123 http://172.17.4.1/private bookworm-staging/main armhf libcairo2 armhf 1.16.0-6 [496 kB]
Get:124 http://172.17.4.1/private bookworm-staging/main armhf fontconfig armhf 2.13.1-4.5 [416 kB]
Get:125 http://172.17.4.1/private bookworm-staging/main armhf libfribidi0 armhf 1.0.8-2.1 [63.7 kB]
Get:126 http://172.17.4.1/private bookworm-staging/main armhf libthai-data all 0.1.29-1 [176 kB]
Get:127 http://172.17.4.1/private bookworm-staging/main armhf libdatrie1 armhf 0.2.13-2+b2 [39.9 kB]
Get:128 http://172.17.4.1/private bookworm-staging/main armhf libthai0 armhf 0.1.29-1 [54.5 kB]
Get:129 http://172.17.4.1/private bookworm-staging/main armhf libpango-1.0-0 armhf 1.50.10+ds-1 [214 kB]
Get:130 http://172.17.4.1/private bookworm-staging/main armhf libpangoft2-1.0-0 armhf 1.50.10+ds-1 [68.6 kB]
Get:131 http://172.17.4.1/private bookworm-staging/main armhf libpangocairo-1.0-0 armhf 1.50.10+ds-1 [58.3 kB]
Get:132 http://172.17.4.1/private bookworm-staging/main armhf libxcomposite1 armhf 1:0.4.5-1 [16.2 kB]
Get:133 http://172.17.4.1/private bookworm-staging/main armhf libxfixes3 armhf 1:6.0.0-2 [21.2 kB]
Get:134 http://172.17.4.1/private bookworm-staging/main armhf libxcursor1 armhf 1:1.2.1-1 [38.0 kB]
Get:135 http://172.17.4.1/private bookworm-staging/main armhf libxdamage1 armhf 1:1.1.5-2 [15.2 kB]
Get:136 http://172.17.4.1/private bookworm-staging/main armhf libxi6 armhf 2:1.8-1 [78.1 kB]
Get:137 http://172.17.4.1/private bookworm-staging/main armhf libxinerama1 armhf 2:1.1.4-3 [17.4 kB]
Get:138 http://172.17.4.1/private bookworm-staging/main armhf libxrandr2 armhf 2:1.5.2-2 [35.5 kB]
Get:139 http://172.17.4.1/private bookworm-staging/main armhf libgtk2.0-0 armhf 2.24.33-2 [1546 kB]
Get:140 http://172.17.4.1/private bookworm-staging/main armhf libglvnd0 armhf 1.5.0-1 [51.5 kB]
Get:141 http://172.17.4.1/private bookworm-staging/main armhf libdrm-common all 2.4.114-1+rpi1 [7276 B]
Get:142 http://172.17.4.1/private bookworm-staging/main armhf libdrm2 armhf 2.4.114-1+rpi1 [32.8 kB]
Get:143 http://172.17.4.1/private bookworm-staging/main armhf libglapi-mesa armhf 22.2.0-1+rpi1 [84.6 kB]
Get:144 http://172.17.4.1/private bookworm-staging/main armhf libx11-xcb1 armhf 2:1.8.1-2 [203 kB]
Get:145 http://172.17.4.1/private bookworm-staging/main armhf libxcb-dri2-0 armhf 1.15-1 [107 kB]
Get:146 http://172.17.4.1/private bookworm-staging/main armhf libxcb-dri3-0 armhf 1.15-1 [107 kB]
Get:147 http://172.17.4.1/private bookworm-staging/main armhf libxcb-glx0 armhf 1.15-1 [121 kB]
Get:148 http://172.17.4.1/private bookworm-staging/main armhf libxcb-present0 armhf 1.15-1 [105 kB]
Get:149 http://172.17.4.1/private bookworm-staging/main armhf libxcb-sync1 armhf 1.15-1 [108 kB]
Get:150 http://172.17.4.1/private bookworm-staging/main armhf libxcb-xfixes0 armhf 1.15-1 [109 kB]
Get:151 http://172.17.4.1/private bookworm-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:152 http://172.17.4.1/private bookworm-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:153 http://172.17.4.1/private bookworm-staging/main armhf libdrm-amdgpu1 armhf 2.4.114-1+rpi1 [19.3 kB]
Get:154 http://172.17.4.1/private bookworm-staging/main armhf libdrm-nouveau2 armhf 2.4.114-1+rpi1 [17.0 kB]
Get:155 http://172.17.4.1/private bookworm-staging/main armhf libdrm-radeon1 armhf 2.4.114-1+rpi1 [20.7 kB]
Get:156 http://172.17.4.1/private bookworm-staging/main armhf libedit2 armhf 3.1-20221030-2 [76.2 kB]
Get:157 http://172.17.4.1/private bookworm-staging/main armhf libz3-4 armhf 4.8.12-3 [5798 kB]
Get:158 http://172.17.4.1/private bookworm-staging/main armhf libllvm14 armhf 1:14.0.6-8+rpi1 [19.5 MB]
Get:159 http://172.17.4.1/private bookworm-staging/main armhf libsensors-config all 1:3.6.0-7.1 [14.3 kB]
Get:160 http://172.17.4.1/private bookworm-staging/main armhf libsensors5 armhf 1:3.6.0-7.1 [31.6 kB]
Get:161 http://172.17.4.1/private bookworm-staging/main armhf libgl1-mesa-dri armhf 22.2.0-1+rpi1 [5593 kB]
Get:162 http://172.17.4.1/private bookworm-staging/main armhf libglx-mesa0 armhf 22.2.0-1+rpi1 [171 kB]
Get:163 http://172.17.4.1/private bookworm-staging/main armhf libglx0 armhf 1.5.0-1 [32.4 kB]
Get:164 http://172.17.4.1/private bookworm-staging/main armhf libgl1 armhf 1.5.0-1 [91.8 kB]
Get:165 http://172.17.4.1/private bookworm-staging/main armhf libgif7 armhf 5.2.1-2.5 [44.7 kB]
Get:166 http://172.17.4.1/private bookworm-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:167 http://172.17.4.1/private bookworm-staging/main armhf libxtst6 armhf 2:1.2.3-1.1 [26.3 kB]
Get:168 http://172.17.4.1/private bookworm-staging/main armhf openjdk-17-jre armhf 17.0.4+8-1+rpi1 [142 kB]
Get:169 http://172.17.4.1/private bookworm-staging/main armhf default-jre armhf 2:1.17-73 [1060 B]
Get:170 http://172.17.4.1/private bookworm-staging/main armhf openjdk-17-jdk-headless armhf 17.0.4+8-1+rpi1 [259 MB]
Get:171 http://172.17.4.1/private bookworm-staging/main armhf default-jdk-headless armhf 2:1.17-73 [1108 B]
Get:172 http://172.17.4.1/private bookworm-staging/main armhf openjdk-17-jdk armhf 17.0.4+8-1+rpi1 [5029 kB]
Get:173 http://172.17.4.1/private bookworm-staging/main armhf default-jdk armhf 2:1.17-73 [1068 B]
Get:174 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-16-0 armhf 10.40-2 [208 kB]
Get:175 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-32-0 armhf 10.40-2 [199 kB]
Get:176 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-posix3 armhf 10.40-2 [53.2 kB]
Get:177 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-dev armhf 10.40-2 [644 kB]
Get:178 http://172.17.4.1/private bookworm-staging/main armhf libsimde-dev all 0.7.2-6 [259 kB]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf libfreetype6 armhf 2.12.1+dfsg-3 [352 kB]
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Selecting previously unselected package libgl1-mesa-dri:armhf.
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Unpacking libgl1-mesa-dri:armhf (22.2.0-1+rpi1) ...
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Unpacking openjdk-17-jdk-headless:armhf (17.0.4+8-1+rpi1) ...
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Setting up libexpat1:armhf (2.5.0-1) ...
Setting up libpipeline1:armhf (1.5.7-1) ...
Setting up libgraphite2-3:armhf (1.3.14-1) ...
Setting up libsimde-dev (0.7.2-6) ...
Setting up liblcms2-2:armhf (2.13.1-1) ...
Setting up libpixman-1-0:armhf (0.42.2-1) ...
Setting up libxau6:armhf (1:1.0.9-1) ...
Setting up libpsl5:armhf (0.21.0-1.2) ...
Setting up cpp-12 (12.2.0-9+rpi1) ...
Setting up libicu72:armhf (72.1-3) ...
Setting up liblerc4:armhf (4.0.0+ds-2) ...
Setting up bsdextrautils (2.38.1-4) ...
Setting up hicolor-icon-theme (0.17-2) ...
Setting up java-common (0.73) ...
Setting up libdatrie1:armhf (0.2.13-2+b2) ...
Setting up libmagic-mgc (1:5.41-4) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.74.1-2) ...
No schema files found: doing nothing.
Setting up libglvnd0:armhf (1.5.0-1) ...
Setting up libdebhelper-perl (13.11.1) ...
Setting up libbrotli1:armhf (1.0.9-2+b2) ...
Setting up libgdk-pixbuf2.0-common (2.42.10+dfsg-1) ...
Setting up x11-common (1:7.7+23) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: WARNING: No init system and policy-rc.d missing! Defaulting to block.
Setting up libsensors-config (1:3.6.0-7.1) ...
Setting up libnghttp2-14:armhf (1.50.0-1) ...
Setting up libmagic1:armhf (1:5.41-4) ...
Setting up libdeflate0:armhf (1.14-1) ...
Setting up gettext-base (0.21-10) ...
Setting up m4 (1.4.19-1) ...
Setting up file (1:5.41-4) ...
Setting up libgomp1:armhf (12.2.0-9+rpi1) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libpcre2-16-0:armhf (10.40-2) ...
Setting up libasound2-data (1.2.8-1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libz3-4:armhf (4.8.12-3) ...
Setting up libpcre2-32-0:armhf (10.40-2) ...
Setting up libuv1:armhf (1.44.2-1+rpi1) ...
Setting up libjpeg62-turbo:armhf (1:2.1.2-1) ...
Setting up libx11-data (2:1.8.1-2) ...
Setting up libnspr4:armhf (2:4.35-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libavahi-common-data:armhf (0.8-6+b1) ...
Setting up libncurses6:armhf (6.3+20220423-2) ...
Setting up libdbus-1-3:armhf (1.14.4-1) ...
Setting up libfribidi0:armhf (1.0.8-2.1) ...
Setting up libpng16-16:armhf (1.6.39-2) ...
Setting up libatomic1:armhf (12.2.0-9+rpi1) ...
Setting up autopoint (0.21-10) ...
Setting up libjsoncpp25:armhf (1.9.5-4) ...
Setting up fonts-dejavu-core (2.37-2) ...
Setting up libpcsclite1:armhf (1.9.9-1) ...
Setting up ucf (3.0043) ...
Setting up libsensors5:armhf (1:3.6.0-7.1) ...
Setting up libglapi-mesa:armhf (22.2.0-1+rpi1) ...
Setting up autoconf (2.71-2) ...
Setting up libwebp7:armhf (1.2.2-2+b1) ...
Setting up libubsan1:armhf (12.2.0-9+rpi1) ...
Setting up libgif7:armhf (5.2.1-2.5) ...
Setting up libpcre2-posix3:armhf (10.40-2) ...
Setting up libmd0:armhf (1.0.4-2) ...
Setting up mount (2.38.1-4) ...
Setting up libxshmfence1:armhf (1.3-1) ...
Setting up at-spi2-common (2.46.0-4) ...
Setting up librhash0:armhf (1.4.3-3) ...
Setting up libasan8:armhf (12.2.0-9+rpi1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libasound2:armhf (1.2.8-1) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libthai-data (0.1.29-1) ...
Setting up libgtk2.0-common (2.24.33-2) ...
Setting up cmake-data (3.25.1-1) ...
Setting up libatk1.0-0:armhf (2.46.0-4) ...
Setting up libtiff5:armhf (4.4.0-6) ...
Setting up libbsd0:armhf (0.11.7-1) ...
Setting up libdrm-common (2.4.114-1+rpi1) ...
Setting up libelf1:armhf (0.187-2+rpi2) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.1) ...
Setting up libcc1-0:armhf (12.2.0-9+rpi1) ...
Setting up libprocps8:armhf (2:3.3.17-7.1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.0-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libxcb1:armhf (1.15-1) ...
Setting up gettext (0.21-10) ...
Setting up libxcb-xfixes0:armhf (1.15-1) ...
Setting up libpcre2-dev:armhf (10.40-2) ...
Setting up libtool (2.4.7-5) ...
Setting up libarchive13:armhf (3.6.0-1) ...
Setting up libxcb-render0:armhf (1.15-1) ...
Setting up fontconfig-config (2.13.1-4.5) ...
Setting up libxcb-glx0:armhf (1.15-1) ...
Setting up libedit2:armhf (3.1-20221030-2) ...
Setting up libavahi-common3:armhf (0.8-6+b1) ...
Setting up libssl3:armhf (3.0.7-1) ...
Setting up libnss3:armhf (2:3.85-1) ...
Setting up libxcb-shm0:armhf (1.15-1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up libxcb-present0:armhf (1.15-1) ...
Setting up dh-autoreconf (20) ...
Setting up libthai0:armhf (0.1.29-1) ...
Setting up libfreetype6:armhf (2.12.1+dfsg-3) ...
Setting up libxcb-sync1:armhf (1.15-1) ...
Setting up libgcc-12-dev:armhf (12.2.0-9+rpi1) ...
Setting up shared-mime-info (2.2-1) ...
Setting up libxcb-dri2-0:armhf (1.15-1) ...
Setting up dh-strip-nondeterminism (1.13.0-2) ...
Setting up libllvm14:armhf (1:14.0.6-8+rpi1) ...
Setting up libdrm2:armhf (2.4.114-1+rpi1) ...
Setting up dwz (0.14+20220924-2) ...
Setting up groff-base (1.22.4-9) ...
Setting up procps (2:3.3.17-7.1) ...
Setting up libx11-6:armhf (2:1.8.1-2) ...
Setting up libharfbuzz0b:armhf (5.2.0-2+b1) ...
Setting up libssh2-1:armhf (1.10.0-3+b1) ...
Setting up libgdk-pixbuf-2.0-0:armhf (2.42.10+dfsg-1) ...
Setting up openssl (3.0.7-1) ...
Setting up libxcomposite1:armhf (1:0.4.5-1) ...
Setting up libavahi-client3:armhf (0.8-6+b1) ...
Setting up libdrm-amdgpu1:armhf (2.4.114-1+rpi1) ...
Setting up libxcb-dri3-0:armhf (1.15-1) ...
Setting up gtk-update-icon-cache (3.24.35-2) ...
Setting up libx11-xcb1:armhf (2:1.8.1-2) ...
Setting up libdrm-nouveau2:armhf (2.4.114-1+rpi1) ...
Setting up libxdamage1:armhf (1:1.1.5-2) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up libstdc++-12-dev:armhf (12.2.0-9+rpi1) ...
Setting up libdrm-radeon1:armhf (2.4.114-1+rpi1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libgl1-mesa-dri:armhf (22.2.0-1+rpi1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up man-db (2.11.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
127 added, 0 removed; done.
Setting up adwaita-icon-theme (43-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up gcc-12 (12.2.0-9+rpi1) ...
Setting up libxfixes3:armhf (1:6.0.0-2) ...
Setting up libxinerama1:armhf (2:1.1.4-3) ...
Setting up libxrandr2:armhf (2:1.5.2-2) ...
Setting up libcups2:armhf (2.4.2-1+b1) ...
Setting up libcurl4:armhf (7.86.0-2) ...
Setting up ca-certificates-java (20220719) ...
Adding debian:ACCVRAIZ1.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem
Adding debian:ANF_Secure_Server_Root_CA.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Certigna.pem
Adding debian:Certigna_Root_CA.pem
Adding debian:Certum_EC-384_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Certum_Trusted_Root_CA.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:EC-ACC.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:GLOBALTRUST_2020.pem
Adding debian:GTS_Root_R1.pem
Adding debian:GTS_Root_R2.pem
Adding debian:GTS_Root_R3.pem
Adding debian:GTS_Root_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:GlobalSign_Root_E46.pem
Adding debian:GlobalSign_Root_R46.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:Hongkong_Post_Root_CA_3.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
Adding debian:NAVER_Global_Root_Certification_Authority.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:TrustCor_ECA-1.pem
Adding debian:TrustCor_RootCert_CA-1.pem
Adding debian:TrustCor_RootCert_CA-2.pem
Adding debian:Trustwave_Global_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
Adding debian:UCA_Extended_Validation_Root.pem
Adding debian:UCA_Global_G2_Root.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:certSIGN_Root_CA_G2.pem
Adding debian:e-Szigno_Root_CA_2017.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:emSign_ECC_Root_CA_-_C3.pem
Adding debian:emSign_ECC_Root_CA_-_G3.pem
Adding debian:emSign_Root_CA_-_C1.pem
Adding debian:emSign_Root_CA_-_G1.pem
done.
Setting up g++-12 (12.2.0-9+rpi1) ...
Setting up libglx-mesa0:armhf (22.2.0-1+rpi1) ...
Setting up libxi6:armhf (2:1.8-1) ...
Setting up libglx0:armhf (1.5.0-1) ...
Setting up libxtst6:armhf (2:1.2.3-1.1) ...
Setting up libxcursor1:armhf (1:1.2.1-1) ...
Setting up debhelper (13.11.1) ...
Setting up libgl1:armhf (1.5.0-1) ...
Setting up cmake (3.25.1-1) ...
Processing triggers for libc-bin (2.35-2+rpi1) ...
Processing triggers for sgml-base (1.31) ...
Setting up libfontconfig1:armhf (2.13.1-4.5) ...
Setting up fontconfig (2.13.1-4.5) ...
Regenerating fonts cache... done.
Setting up libpango-1.0-0:armhf (1.50.10+ds-1) ...
Setting up libcairo2:armhf (1.16.0-6) ...
Setting up openjdk-17-jre-headless:armhf (17.0.4+8-1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up libpangoft2-1.0-0:armhf (1.50.10+ds-1) ...
Setting up libpangocairo-1.0-0:armhf (1.50.10+ds-1) ...
Setting up default-jre-headless (2:1.17-73) ...
Setting up libgtk2.0-0:armhf (2.24.33-2) ...
Setting up openjdk-17-jdk-headless:armhf (17.0.4+8-1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up openjdk-17-jre:armhf (17.0.4+8-1+rpi1) ...
Setting up default-jre (2:1.17-73) ...
Setting up openjdk-17-jdk:armhf (17.0.4+8-1+rpi1) ...
update-alternatives: using /usr/lib/jvm/java-17-openjdk-armhf/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
Setting up default-jdk-headless (2:1.17-73) ...
Setting up default-jdk (2:1.17-73) ...
Setting up sbuild-build-depends-plast-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for libc-bin (2.35-2+rpi1) ...
Processing triggers for ca-certificates-java (20220719) ...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.39-6+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-9+rpi1 gcc-12_12.2.0-9+rpi1 libc6-dev_2.35-2+rpi1 libstdc++-12-dev_12.2.0-9+rpi1 libstdc++6_12.2.0-9+rpi1 linux-libc-dev_5.19.6-1+rpi1
Package versions: adduser_3.129 adwaita-icon-theme_43-1 apt_2.5.3 aptitude_0.8.13-5 aptitude-common_0.8.13-5 at-spi2-common_2.46.0-4 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2~rc2-2 binutils_2.39-6+rpi1 binutils-arm-linux-gnueabihf_2.39-6+rpi1 binutils-common_2.39-6+rpi1 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20211016 ca-certificates-java_20220719 cmake_3.25.1-1 cmake-data_3.25.1-1 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-9+rpi1 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.79 debhelper_13.11.1 debianutils_5.7-0.3 default-jdk_2:1.17-73 default-jdk-headless_2:1.17-73 default-jre_2:1.17-73 default-jre-headless_2:1.17-73 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-2 diffutils_1:3.8-1 dirmngr_2.2.39-1 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.14+20220924-2 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 file_1:5.41-4 findutils_4.9.0-3 fontconfig_2.13.1-4.5 fontconfig-config_2.13.1-4.5 fonts-dejavu-core_2.37-2 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-9+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-9+rpi1 gcc-12-base_12.2.0-9+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-10 gettext-base_0.21-10 gnupg_2.2.39-1 gnupg-l10n_2.2.39-1 gnupg-utils_2.2.39-1 gpg_2.2.39-1 gpg-agent_2.2.39-1 gpg-wks-client_2.2.39-1 gpg-wks-server_2.2.39-1 gpgconf_2.2.39-1 gpgsm_2.2.39-1 gpgv_2.2.39-1 grep_3.7-1 groff-base_1.22.4-9 gtk-update-icon-cache_3.24.35-2 gzip_1.12-1 hicolor-icon-theme_0.17-2 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20211215-1 java-common_0.73 krb5-locales_1.20-1 libacl1_2.3.1-1 libapt-pkg6.0_2.5.3 libarchive-zip-perl_1.68-1 libarchive13_3.6.0-1 libasan8_12.2.0-9+rpi1 libasound2_1.2.8-1 libasound2-data_1.2.8-1 libassuan0_2.5.5-4 libatk1.0-0_2.46.0-4 libatomic1_12.2.0-9+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1 libavahi-client3_0.8-6+b1 libavahi-common-data_0.8-6+b1 libavahi-common3_0.8-6+b1 libbinutils_2.39-6+rpi1 libblkid1_2.38.1-4 libboost-iostreams1.74.0_1.74.0-17 libbrotli1_1.0.9-2+b2 libbsd0_0.11.7-1 libbz2-1.0_1.0.8-5+b2 libc-bin_2.35-2+rpi1 libc-dev-bin_2.35-2+rpi1 libc6_2.35-2+rpi1 libc6-dev_2.35-2+rpi1 libcairo2_1.16.0-6 libcap-ng0_0.8.3-1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_12.2.0-9+rpi1 libcom-err2_1.46.6~rc1-1 libcrypt-dev_1:4.4.28-2 libcrypt1_1:4.4.28-2 libctf-nobfd0_2.39-6+rpi1 libctf0_2.39-6+rpi1 libcups2_2.4.2-1+b1 libcurl4_7.86.0-2 libcwidget4_0.5.18-6 libdatrie1_0.2.13-2+b2 libdb5.3_5.3.28+dfsg1-0.10 libdbus-1-3_1.14.4-1 libdebconfclient0_0.264 libdebhelper-perl_13.11.1 libdeflate0_1.14-1 libdpkg-perl_1.21.9+rpi1 libdrm-amdgpu1_2.4.114-1+rpi1 libdrm-common_2.4.114-1+rpi1 libdrm-nouveau2_2.4.114-1+rpi1 libdrm-radeon1_2.4.114-1+rpi1 libdrm2_2.4.114-1+rpi1 libedit2_3.1-20221030-2 libelf1_0.187-2+rpi2 libexpat1_2.5.0-1 libext2fs2_1.46.6~rc1-1 libfakeroot_1.29-1 libffi8_3.4.2-4 libfile-stripnondeterminism-perl_1.13.0-2 libfontconfig1_2.13.1-4.5 libfreetype6_2.12.1+dfsg-3 libfribidi0_1.0.8-2.1 libgcc-12-dev_12.2.0-9+rpi1 libgcc-s1_12.2.0-9+rpi1 libgcrypt20_1.10.1-2+b2 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgdk-pixbuf-2.0-0_2.42.10+dfsg-1 libgdk-pixbuf2.0-common_2.42.10+dfsg-1 libgif7_5.2.1-2.5 libgl1_1.5.0-1 libgl1-mesa-dri_22.2.0-1+rpi1 libglapi-mesa_22.2.0-1+rpi1 libglib2.0-0_2.74.1-2 libglvnd0_1.5.0-1 libglx-mesa0_22.2.0-1+rpi1 libglx0_1.5.0-1 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-2 libgomp1_12.2.0-9+rpi1 libgpg-error0_1.45-2 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.20-1 libgtk2.0-0_2.24.33-2 libgtk2.0-common_2.24.33-2 libharfbuzz0b_5.2.0-2+b1 libhogweed6_3.8.1-2 libicu72_72.1-3 libidn2-0_2.3.3-1 libisl23_0.25-1 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:2.1.2-1 libjsoncpp25_1.9.5-4 libk5crypto3_1.20-1 libkeyutils1_1.6.3-1 libkrb5-3_1.20-1 libkrb5support0_1.20-1 libksba8_1.6.0-3 liblcms2-2_2.13.1-1 libldap-2.4-2_2.4.59+dfsg-1+b1 libldap-2.5-0_2.5.13+dfsg-2+rpi1 libldap-common_2.5.13+dfsg-2+rpi1 liblerc4_4.0.0+ds-2 libllvm14_1:14.0.6-8+rpi1 liblz4-1_1.9.4-1+rpi1 liblzma5_5.2.5-2.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmd0_1.0.4-2 libmount1_2.38.1-4 libmpc3_1.2.1-2 libmpfr6_4.1.0-3 libncurses6_6.3+20220423-2 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnghttp2-14_1.50.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnspr4_2:4.35-1 libnss3_2:3.85-1 libp11-kit0_0.24.1-1 libpam-cap_1:2.44-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam0g_1.5.2-5 libpango-1.0-0_1.50.10+ds-1 libpangocairo-1.0-0_1.50.10+ds-1 libpangoft2-1.0-0_1.50.10+ds-1 libpcre2-16-0_10.40-2 libpcre2-32-0_10.40-2 libpcre2-8-0_10.40-2 libpcre2-dev_10.40-2 libpcre2-posix3_10.40-2 libpcre3_2:8.39-14 libpcsclite1_1.9.9-1 libperl5.34_5.34.0-5 libperl5.36_5.36.0-4 libpipeline1_1.5.7-1 libpixman-1-0_0.42.2-1 libpng16-16_1.6.39-2 libprocps8_2:3.3.17-7.1 libpsl5_0.21.0-1.2 libreadline8_8.2-1 librhash0_1.4.3-3 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg-8 libsasl2-modules-db_2.1.28+dfsg-8 libseccomp2_2.5.4-1+rpi1 libselinux1_3.4-1 libsemanage-common_3.4-1 libsemanage2_3.4-1 libsensors-config_1:3.6.0-7.1 libsensors5_1:3.6.0-7.1 libsepol1_3.1-1 libsepol2_3.4-2 libsigc++-2.0-0v5_2.10.8-1 libsimde-dev_0.7.2-6 libsmartcols1_2.38.1-4 libsqlite3-0_3.39.4-1 libss2_1.46.6~rc1-1 libssh2-1_1.10.0-3+b1 libssl1.1_1.1.1o-1 libssl3_3.0.7-1 libstdc++-12-dev_12.2.0-9+rpi1 libstdc++6_12.2.0-9+rpi1 libsub-override-perl_0.09-4 libsystemd0_251.5-1+rpi1 libtasn1-6_4.19.0-2 libthai-data_0.1.29-1 libthai0_0.1.29-1 libtiff5_4.4.0-6 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libubsan1_12.2.0-9+rpi1 libuchardet0_0.0.7-1 libudev1_251.5-1+rpi1 libunistring2_1.0-2 libuuid1_2.38.1-4 libuv1_1.44.2-1+rpi1 libwebp7_1.2.2-2+b1 libx11-6_2:1.8.1-2 libx11-data_2:1.8.1-2 libx11-xcb1_2:1.8.1-2 libxapian30_1.4.21-1 libxau6_1:1.0.9-1 libxcb-dri2-0_1.15-1 libxcb-dri3-0_1.15-1 libxcb-glx0_1.15-1 libxcb-present0_1.15-1 libxcb-render0_1.15-1 libxcb-shm0_1.15-1 libxcb-sync1_1.15-1 libxcb-xfixes0_1.15-1 libxcb1_1.15-1 libxcomposite1_1:0.4.5-1 libxcursor1_1:1.2.1-1 libxdamage1_1:1.1.5-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxfixes3_1:6.0.0-2 libxi6_2:1.8-1 libxinerama1_2:1.1.4-3 libxml2_2.9.14+dfsg-1.1 libxrandr2_2:1.5.2-2 libxrender1_1:0.9.10-1.1 libxshmfence1_1.3-1 libxtst6_2:1.2.3-1.1 libxxf86vm1_1:1.1.4-1+b2 libxxhash0_0.8.1-1 libz3-4_4.8.12-3 libzstd1_1.5.2+dfsg-1 linux-libc-dev_5.19.6-1+rpi1 login_1:4.12.3+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-1 make_4.3-4.1 man-db_2.11.1-1 mawk_1.3.4.20200120-3.1 mount_2.38.1-4 nano_6.4-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.3 openjdk-17-jdk_17.0.4+8-1+rpi1 openjdk-17-jdk-headless_17.0.4+8-1+rpi1 openjdk-17-jre_17.0.4+8-1+rpi1 openjdk-17-jre-headless_17.0.4+8-1+rpi1 openssl_3.0.7-1 passwd_1:4.12.3+dfsg1-1 patch_2.7.6-7 perl_5.36.0-4 perl-base_5.36.0-4 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-4 pinentry-curses_1.2.0-2 po-debconf_1.0.21+nmu1 procps_2:3.3.17-7.1 raspbian-archive-keyring_20120528.2 readline-common_8.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-plast-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 shared-mime-info_2.2-1 sysvinit-utils_3.05-6 tar_1.34+dfsg-1 tzdata_2022d-1 ucf_3.0043 util-linux_2.38.1-4 util-linux-extra_2.38.1-4 x11-common_1:7.7+23 xz-utils_5.2.5-2.1 zlib1g_1:1.2.11.dfsg-4.1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.4UIlqlf5/trustedkeys.kbx': General error
gpgv: Signature made Mon Dec 5 18:36:04 2022 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./plast_2.3.2+dfsg-10.dsc
dpkg-source: info: extracting plast in /<<BUILDDIR>>/plast-2.3.2+dfsg
dpkg-source: info: unpacking plast_2.3.2+dfsg.orig.tar.xz
dpkg-source: info: unpacking plast_2.3.2+dfsg-10.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying adapt_auto_test_script.sh
dpkg-source: info: applying no_msse3.patch
dpkg-source: info: applying reproducible.patch
dpkg-source: info: applying simde.patch
dpkg-source: info: applying pcre.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-6dcfe0d7-afb1-48be-9055-acaea4f2e59c
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package plast
dpkg-buildpackage: info: source version 2.3.2+dfsg-10
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --buildsystem=cmake
dh_auto_clean -O--buildsystem=cmake
dh_autoreconf_clean -O--buildsystem=cmake
dh_clean -O--buildsystem=cmake
debian/rules binary-arch
dh binary-arch --buildsystem=cmake
dh_update_autotools_config -a -O--buildsystem=cmake
dh_autoreconf -a -O--buildsystem=cmake
debian/rules override_dh_auto_configure-arch
make[1]: Entering directory '/<<BUILDDIR>>/plast-2.3.2+dfsg'
dh_auto_configure
cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf ..
-- The C compiler identification is GNU 12.2.0
-- The CXX compiler identification is GNU 12.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Deprecation Warning at CMakeLists.txt:6 (cmake_minimum_required):
Compatibility with CMake < 2.8.12 will be removed from a future version of
CMake.
Update the VERSION argument <min> value or use a ...<max> suffix to tell
CMake that the project does not need compatibility with older versions.
-- Found JNI: /usr/lib/jvm/default-java/include found components: AWT JVM
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
CMAKE_INSTALL_LIBDIR
CMAKE_INSTALL_LOCALSTATEDIR
CMAKE_INSTALL_RUNSTATEDIR
CMAKE_INSTALL_SYSCONFDIR
FETCHCONTENT_FULLY_DISCONNECTED
-- Build files have been written to: /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf
make[1]: Leaving directory '/<<BUILDDIR>>/plast-2.3.2+dfsg'
debian/rules override_dh_auto_build-arch
make[1]: Entering directory '/<<BUILDDIR>>/plast-2.3.2+dfsg'
dh_auto_build
cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1
make[2]: Entering directory '/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<BUILDDIR>>/plast-2.3.2+dfsg -B/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/CMakeFiles /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf'
make -f CMakeFiles/PlastLibrary.dir/build.make CMakeFiles/PlastLibrary.dir/depend
make -f CMakeFiles/plast.dir/build.make CMakeFiles/plast.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf'
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[ 2%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/core/impl/AlgorithmPlastn.cpp.o
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[ 4%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/core/impl/DefaultAlgoEnvironment.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/core/impl/DefaultAlgoEnvironment.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/core/impl/DefaultAlgoEnvironment.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/core/impl/DefaultAlgoEnvironment.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoEnvironment.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IDatabaseQuickReader.hpp:39,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/impl/FastaDatabaseQuickReader.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoEnvironment.cpp:23:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >}; _Tp = std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >; _Alloc = std::allocator<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > >::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >}; _Tp = std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >; _Alloc = std::allocator<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > >]',
inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >; _Alloc = std::allocator<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > >]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
inlined from 'std::vector<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > > algo::core::impl::DefaultEnvironment::buildUri(database::IDatabaseQuickReader*, database::IDatabaseQuickReader*)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoEnvironment.cpp:523:30:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >*, std::vector<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > > >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 5%] Building CXX object CMakeFiles/plast.dir/src/algo/core/impl/ScoreMatrix.cpp.o
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[ 5%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/core/impl/PlastnAlgoConfig.cpp.o
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/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/core/impl/ScoreMatrix.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/core/impl/ScoreMatrix.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/core/impl/ScoreMatrix.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/core/impl/ScoreMatrix.cpp
[ 6%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/common/AbstractHitIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/common/AbstractHitIterator.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/common/AbstractHitIterator.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/common/AbstractHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/common/AbstractHitIterator.cpp
[ 6%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/common/AbstractPipeHitIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/common/AbstractPipeHitIterator.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/common/AbstractPipeHitIterator.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/common/AbstractPipeHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/common/AbstractPipeHitIterator.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IDatabaseQuickReader.hpp:39,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/impl/FastaDatabaseQuickReader.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoEnvironment.cpp:23:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >}; _Tp = std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >; _Alloc = std::allocator<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > >::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >}; _Tp = std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >; _Alloc = std::allocator<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > >]',
inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >; _Alloc = std::allocator<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > >]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
inlined from 'std::vector<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > > algo::core::impl::DefaultEnvironment::buildUri(database::IDatabaseQuickReader*, database::IDatabaseQuickReader*)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/core/impl/DefaultAlgoEnvironment.cpp:523:30:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> >*, std::vector<std::pair<misc::Range<long long unsigned int>, misc::Range<long long unsigned int> > > >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 6%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/common/AbstractHitIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/common/AbstractHitIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/common/AbstractHitIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/common/AbstractHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/common/AbstractHitIterator.cpp
[ 7%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/gap/CompositionHitIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/gap/CompositionHitIterator.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/gap/CompositionHitIterator.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/gap/CompositionHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/gap/CompositionHitIterator.cpp
[ 7%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/common/AbstractPipeHitIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/common/AbstractPipeHitIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/common/AbstractPipeHitIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/common/AbstractPipeHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/common/AbstractPipeHitIterator.cpp
[ 7%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/gap/FullGapHitIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/gap/FullGapHitIterator.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/gap/FullGapHitIterator.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/gap/FullGapHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/gap/FullGapHitIterator.cpp
[ 8%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/CompositionHitIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/CompositionHitIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/CompositionHitIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/CompositionHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/gap/CompositionHitIterator.cpp
[ 9%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIterator.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIterator.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/gap/SmallGapHitIterator.cpp
[ 9%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIteratorNull.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIteratorNull.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIteratorNull.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIteratorNull.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/gap/SmallGapHitIteratorNull.cpp
[ 9%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp
[ 10%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp
[ 10%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/FullGapHitIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/FullGapHitIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/FullGapHitIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/FullGapHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/gap/FullGapHitIterator.cpp
[ 10%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/hsp/HspExtensionCmd.cpp
[ 10%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/hsp/HspGeneratorCmd.cpp
[ 11%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/seed/SeedHitIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/seed/SeedHitIterator.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/seed/SeedHitIterator.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/seed/SeedHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/seed/SeedHitIterator.cpp
[ 12%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIterator.cpp.o
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[ 12%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/seed/SeedHitIteratorCached.cpp
[ 12%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/ungap/UngapExtendHitIterator.cpp
[ 12%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIteratorNull.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIteratorNull.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIteratorNull.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIteratorNull.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/gap/SmallGapHitIteratorNull.cpp
[ 13%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIterator.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIterator.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/ungap/UngapHitIterator.cpp
[ 13%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/ungap/UngapHitIteratorNull.cpp
[ 13%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/gap/SmallGapHitIteratorSSE8.cpp
[ 13%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp
[ 14%] Building CXX object CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o -MF CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o.d -o CMakeFiles/plast.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp
[ 14%] Building CXX object CMakeFiles/plast.dir/src/algo/stats/impl/Statistics.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/stats/impl/Statistics.cpp.o -MF CMakeFiles/plast.dir/src/algo/stats/impl/Statistics.cpp.o.d -o CMakeFiles/plast.dir/src/algo/stats/impl/Statistics.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/Statistics.cpp
[ 15%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/hsp/AlignmentGeneratorCmd.cpp
[ 16%] Building CXX object CMakeFiles/plast.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o -MF CMakeFiles/plast.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o.d -o CMakeFiles/plast.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/StatisticsPlastn.cpp
[ 16%] Building CXX object CMakeFiles/plast.dir/src/algo/stats/impl/StatisticsSpouge.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/algo/stats/impl/StatisticsSpouge.cpp.o -MF CMakeFiles/plast.dir/src/algo/stats/impl/StatisticsSpouge.cpp.o.d -o CMakeFiles/plast.dir/src/algo/stats/impl/StatisticsSpouge.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/StatisticsSpouge.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IAlphabet.hpp:41,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IWord.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequence.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceIterator.hpp:34,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceDatabase.hpp:36,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/algo/stats/impl/Statistics.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/Statistics.cpp:23:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const statistics::IQueryInformation::SequenceInfo&}; _Tp = statistics::IQueryInformation::SequenceInfo; _Alloc = std::allocator<statistics::IQueryInformation::SequenceInfo>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<statistics::IQueryInformation::SequenceInfo>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = statistics::IQueryInformation::SequenceInfo; _Alloc = std::allocator<statistics::IQueryInformation::SequenceInfo>]',
inlined from 'void statistics::impl::QueryInformation::build()' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/Statistics.cpp:410:46:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<statistics::IQueryInformation::SequenceInfo*, std::vector<statistics::IQueryInformation::SequenceInfo> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 16%] Building CXX object CMakeFiles/plast.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o -MF CMakeFiles/plast.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/AbstractAlignmentContainer.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/StatisticsPlastn.cpp: In member function 'double statistics::impl::GlobalParametersPlastn::karlinLHtoK(Blast_ScoreFreq*, double, double)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/StatisticsPlastn.cpp:415:25: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
415 | register double innerSum;
| ^~~~~~~~
[ 16%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspExtensionCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/hsp/HspExtensionCmd.cpp
[ 17%] Building CXX object CMakeFiles/plast.dir/src/alignment/core/impl/Alignment.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/core/impl/Alignment.cpp.o -MF CMakeFiles/plast.dir/src/alignment/core/impl/Alignment.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/core/impl/Alignment.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/Alignment.cpp
[ 17%] Building CXX object CMakeFiles/plast.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o -MF CMakeFiles/plast.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/AlignmentContainerFactory.cpp
[ 17%] Building CXX object CMakeFiles/plast.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o -MF CMakeFiles/plast.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/BasicAlignmentContainer.cpp
[ 17%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/hsp/HspGeneratorCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/hsp/HspGeneratorCmd.cpp
[ 18%] Building CXX object CMakeFiles/plast.dir/src/alignment/core/impl/HspContainer.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/core/impl/HspContainer.cpp.o -MF CMakeFiles/plast.dir/src/alignment/core/impl/HspContainer.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/core/impl/HspContainer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/HspContainer.cpp
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/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/core/impl/ReaderAlignmentContainer.cpp.o -MF CMakeFiles/plast.dir/src/alignment/core/impl/ReaderAlignmentContainer.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/core/impl/ReaderAlignmentContainer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/ReaderAlignmentContainer.cpp
[ 18%] Building CXX object CMakeFiles/plast.dir/src/alignment/core/impl/UngapAlignmentContainer.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/core/impl/UngapAlignmentContainer.cpp.o -MF CMakeFiles/plast.dir/src/alignment/core/impl/UngapAlignmentContainer.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/core/impl/UngapAlignmentContainer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/UngapAlignmentContainer.cpp
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/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/seed/SeedHitIterator.cpp
[ 20%] Building CXX object CMakeFiles/plast.dir/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp.o -MF CMakeFiles/plast.dir/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp
[ 20%] Building CXX object CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterFactory.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterFactory.cpp.o -MF CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterFactory.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterFactory.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/filter/impl/AlignmentFilterFactory.cpp
[ 20%] Building CXX object CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterOperator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterOperator.cpp.o -MF CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterOperator.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterOperator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/filter/impl/AlignmentFilterOperator.cpp
[ 20%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/seed/SeedHitIteratorCached.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/seed/SeedHitIteratorCached.cpp
[ 21%] Building CXX object CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterXML.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterXML.cpp.o -MF CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterXML.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/filter/impl/AlignmentFilterXML.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/filter/impl/AlignmentFilterXML.cpp
[ 21%] Building CXX object CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentContainerShrinkCmd.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentContainerShrinkCmd.cpp.o -MF CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentContainerShrinkCmd.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentContainerShrinkCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/tools/impl/AlignmentContainerShrinkCmd.cpp
[ 21%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapExtendHitIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/ungap/UngapExtendHitIterator.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IAlphabet.hpp:41,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IWord.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequence.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceIterator.hpp:34,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceDatabase.hpp:36,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/alignment/core/api/Alignment.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/alignment/filter/api/IAlignmentFilter.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/alignment/filter/impl/AbstractAlignmentFilterFactory.hpp:28,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double, std::allocator<double> >::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
inlined from 'void alignment::filter::impl::AlignmentFilterUnaryOperator<T>::configure(const std::vector<std::__cxx11::basic_string<char> >&) [with T = double]' at /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/alignment/filter/impl/AlignmentFilterOperator.hpp:183:31,
inlined from 'alignment::filter::impl::AlignmentFilterUnaryOperator<T>::AlignmentFilterUnaryOperator(const std::vector<std::__cxx11::basic_string<char> >&) [with T = double]' at /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/alignment/filter/impl/AlignmentFilterOperator.hpp:120:19:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 22%] Building CXX object CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentOverlapCmd.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentOverlapCmd.cpp.o -MF CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentOverlapCmd.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentOverlapCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/tools/impl/AlignmentOverlapCmd.cpp
[ 22%] Building CXX object CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentSplitter.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentSplitter.cpp.o -MF CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentSplitter.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentSplitter.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/tools/impl/AlignmentSplitter.cpp
[ 23%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIterator.cpp.o
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[ 23%] Building CXX object CMakeFiles/plast.dir/src/alignment/tools/impl/AlignmentSplitterBanded.cpp.o
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[ 24%] Building CXX object CMakeFiles/plast.dir/src/alignment/tools/impl/SemiGappedAlign.cpp.o
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[ 24%] Building CXX object CMakeFiles/plast.dir/src/alignment/tools/impl/SemiGappedAlignTraceback.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/tools/impl/SemiGappedAlignTraceback.cpp.o -MF CMakeFiles/plast.dir/src/alignment/tools/impl/SemiGappedAlignTraceback.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/tools/impl/SemiGappedAlignTraceback.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/tools/impl/SemiGappedAlignTraceback.cpp
[ 24%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorNull.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/ungap/UngapHitIteratorNull.cpp
[ 24%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/CompareContainerVisitor.cpp.o
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[ 25%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/FilterContainerVisitor.cpp.o
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[ 25%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE16.cpp.o
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[ 25%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp
[ 26%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/ModelBuilderVisitor.cpp
[ 26%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/NucleotidConversionVisitor.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/NucleotidConversionVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/NucleotidConversionVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/NucleotidConversionVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/NucleotidConversionVisitor.cpp
[ 27%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/hits/ungap/UngapHitIteratorSSE8.cpp
[ 27%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/QueryReorderVisitor.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/QueryReorderVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/QueryReorderVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/QueryReorderVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/QueryReorderVisitor.cpp
[ 28%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/ReverseStrandVisitor.cpp
[ 28%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/Statistics.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/Statistics.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/Statistics.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/Statistics.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/Statistics.cpp
[ 28%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp
[ 29%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/SortContainerVisitor.cpp
[ 29%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp
[ 29%] Building CXX object CMakeFiles/plast.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o -MF CMakeFiles/plast.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o.d -o CMakeFiles/plast.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/XmlOutputVisitor.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IAlphabet.hpp:41,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IWord.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequence.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceIterator.hpp:34,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceDatabase.hpp:36,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/algo/stats/impl/Statistics.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/Statistics.cpp:23:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const statistics::IQueryInformation::SequenceInfo&}; _Tp = statistics::IQueryInformation::SequenceInfo; _Alloc = std::allocator<statistics::IQueryInformation::SequenceInfo>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<statistics::IQueryInformation::SequenceInfo>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = statistics::IQueryInformation::SequenceInfo; _Alloc = std::allocator<statistics::IQueryInformation::SequenceInfo>]',
inlined from 'void statistics::impl::QueryInformation::build()' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/Statistics.cpp:410:46:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<statistics::IQueryInformation::SequenceInfo*, std::vector<statistics::IQueryInformation::SequenceInfo> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 30%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsPlastn.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/StatisticsPlastn.cpp
[ 31%] Building CXX object CMakeFiles/plast.dir/src/database/impl/AbstractSequenceIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/AbstractSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/AbstractSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/AbstractSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/AbstractSequenceIterator.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/StatisticsPlastn.cpp: In member function 'double statistics::impl::GlobalParametersPlastn::karlinLHtoK(Blast_ScoreFreq*, double, double)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/StatisticsPlastn.cpp:415:25: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
415 | register double innerSum;
| ^~~~~~~~
[ 31%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BasicSequenceBuilder.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BasicSequenceBuilder.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BasicSequenceBuilder.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BasicSequenceBuilder.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BasicSequenceBuilder.cpp
[ 31%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbAsn1HeaderDecoder.cpp
[ 32%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbDatabaseQuickReader.cpp
[ 32%] Building CXX object CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsSpouge.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsSpouge.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsSpouge.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/algo/stats/impl/StatisticsSpouge.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/algo/stats/impl/StatisticsSpouge.cpp
[ 32%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BlastdbFileIndexReader.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbFileIndexReader.cpp
[ 32%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BlastdbSequenceIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BlastdbSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BlastdbSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BlastdbSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbSequenceIterator.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IDatabaseQuickReader.hpp:39,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/impl/BlastdbDatabaseQuickReader.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbDatabaseQuickReader.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'virtual void database::impl::BlastdbDatabaseQuickReader::read(u_int64_t)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbDatabaseQuickReader.cpp:146:26:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'virtual void database::impl::BlastdbDatabaseQuickReader::read(u_int64_t)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbDatabaseQuickReader.cpp:152:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 32%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AbstractAlignmentContainer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/AbstractAlignmentContainer.cpp
[ 33%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/Alignment.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/Alignment.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/Alignment.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/Alignment.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/Alignment.cpp
[ 34%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BufferedCachedSequenceDatabase.cpp
[ 34%] Building CXX object CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/BufferedSequenceDatabase.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BufferedSequenceDatabase.cpp
[ 34%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/AlignmentContainerFactory.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/AlignmentContainerFactory.cpp
[ 34%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/BasicAlignmentContainer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/BasicAlignmentContainer.cpp
[ 34%] Building CXX object CMakeFiles/plast.dir/src/database/impl/CompositeSequenceDatabase.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/CompositeSequenceDatabase.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/CompositeSequenceDatabase.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/CompositeSequenceDatabase.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/CompositeSequenceDatabase.cpp
[ 35%] Building CXX object CMakeFiles/plast.dir/src/database/impl/DefaultAlphabet.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/DefaultAlphabet.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/DefaultAlphabet.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/DefaultAlphabet.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/DefaultAlphabet.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IAlphabet.hpp:41,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IWord.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequence.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceIterator.hpp:34,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceDatabase.hpp:36,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/impl/CompositeSequenceDatabase.hpp:31,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/CompositeSequenceDatabase.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
inlined from 'database::impl::CompositeSequenceDatabase::CompositeSequenceDatabase(std::__cxx11::list<database::ISequenceDatabase*>)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/CompositeSequenceDatabase.cpp:48:33:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'database::impl::CompositeSequenceDatabase::CompositeSequenceDatabase(std::__cxx11::list<database::ISequenceDatabase*>)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/CompositeSequenceDatabase.cpp:67:37:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 36%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/HspContainer.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/HspContainer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/HspContainer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/HspContainer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/HspContainer.cpp
[ 36%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp
[ 37%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/FastaSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaSequenceIterator.cpp
[ 37%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/ReaderAlignmentContainer.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/ReaderAlignmentContainer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/ReaderAlignmentContainer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/ReaderAlignmentContainer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/ReaderAlignmentContainer.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp: In member function 'virtual int database::impl::FastaDatabaseQuickReader::load(const std::string&)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:200:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
200 | fread (&magic, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:211:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
211 | fread (&len, sizeof(size_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:215:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
215 | fread (buffer, sizeof(char), len, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:231:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
231 | fread (&_totalSize, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:234:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
234 | fread (&_dataSize, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:237:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
237 | fread (&_nbSequences, sizeof(u_int32_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:240:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
240 | fread (&_dbKind, sizeof(DatabaseKind_e), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:243:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
243 | fread (&_maxblocksize, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:247:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
247 | fread (&nbOffsets, sizeof(size_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:253:19: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
253 | fread (&offset, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp: In static member function 'static bool database::impl::FastaDatabaseQuickReader::isQuickReaderFile(const std::string&)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:373:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
373 | u_int64_t magic = 0; fread (&magic, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/FastaSequenceOutput.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaSequenceOutput.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IDatabaseQuickReader.hpp:39,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/impl/FastaDatabaseQuickReader.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'virtual void database::impl::FastaDatabaseQuickReader::read(u_int64_t)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:121:40:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'virtual void database::impl::FastaDatabaseQuickReader::read(u_int64_t)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:164:24:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'virtual int database::impl::FastaDatabaseQuickReader::load(const std::string&)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:254:32:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/UngapAlignmentContainer.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/UngapAlignmentContainer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/UngapAlignmentContainer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/core/impl/UngapAlignmentContainer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/core/impl/UngapAlignmentContainer.cpp
[ 38%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp
[ 38%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterFactory.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterFactory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterFactory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterFactory.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/filter/impl/AlignmentFilterFactory.cpp
[ 38%] Building CXX object CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/ReadingFrameSequenceDatabase.cpp
[ 38%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterOperator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterOperator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterOperator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterOperator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/filter/impl/AlignmentFilterOperator.cpp
[ 39%] Building CXX object CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/ReadingFrameSequenceIterator.cpp
[ 39%] Building CXX object CMakeFiles/plast.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/ReverseStrandSequenceIterator.cpp
[ 40%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterXML.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterXML.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterXML.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/filter/impl/AlignmentFilterXML.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/filter/impl/AlignmentFilterXML.cpp
[ 40%] Building CXX object CMakeFiles/plast.dir/src/database/impl/Sequence.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/Sequence.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/Sequence.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/Sequence.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/Sequence.cpp
[ 41%] Building CXX object CMakeFiles/plast.dir/src/database/impl/SequenceTokenizer.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/SequenceTokenizer.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/SequenceTokenizer.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/SequenceTokenizer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/SequenceTokenizer.cpp
[ 41%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentContainerShrinkCmd.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentContainerShrinkCmd.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentContainerShrinkCmd.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentContainerShrinkCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/tools/impl/AlignmentContainerShrinkCmd.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IAlphabet.hpp:41,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IWord.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequence.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceIterator.hpp:34,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceDatabase.hpp:36,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/alignment/core/api/Alignment.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/alignment/filter/api/IAlignmentFilter.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/alignment/filter/impl/AbstractAlignmentFilterFactory.hpp:28,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/filter/impl/AbstractAlignmentFilterFactory.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double, std::allocator<double> >::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
inlined from 'void alignment::filter::impl::AlignmentFilterUnaryOperator<T>::configure(const std::vector<std::__cxx11::basic_string<char> >&) [with T = double]' at /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/alignment/filter/impl/AlignmentFilterOperator.hpp:183:31,
inlined from 'alignment::filter::impl::AlignmentFilterUnaryOperator<T>::AlignmentFilterUnaryOperator(const std::vector<std::__cxx11::basic_string<char> >&) [with T = double]' at /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/alignment/filter/impl/AlignmentFilterOperator.hpp:120:19:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/plast.dir/src/database/impl/StringSequenceIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/database/impl/StringSequenceIterator.cpp.o -MF CMakeFiles/plast.dir/src/database/impl/StringSequenceIterator.cpp.o.d -o CMakeFiles/plast.dir/src/database/impl/StringSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/StringSequenceIterator.cpp
[ 41%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/CommandDispatcher.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/CommandDispatcher.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/CommandDispatcher.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/CommandDispatcher.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/CommandDispatcher.cpp
[ 42%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentOverlapCmd.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentOverlapCmd.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentOverlapCmd.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentOverlapCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/tools/impl/AlignmentOverlapCmd.cpp
[ 42%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentSplitter.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentSplitter.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentSplitter.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentSplitter.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/tools/impl/AlignmentSplitter.cpp
[ 43%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/ConfigFileProperties.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/ConfigFileProperties.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/ConfigFileProperties.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/ConfigFileProperties.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/ConfigFileProperties.cpp
[ 43%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/DirectoryIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/DirectoryIterator.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/DirectoryIterator.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/DirectoryIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/DirectoryIterator.cpp
[ 43%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentSplitterBanded.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentSplitterBanded.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentSplitterBanded.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/AlignmentSplitterBanded.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/tools/impl/AlignmentSplitterBanded.cpp
[ 44%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/SemiGappedAlign.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/SemiGappedAlign.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/SemiGappedAlign.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/tools/impl/SemiGappedAlign.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/tools/impl/SemiGappedAlign.cpp
[ 44%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/FileLineIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/FileLineIterator.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/FileLineIterator.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/FileLineIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/FileLineIterator.cpp
[ 45%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/Observer.cpp.o
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/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/CompareResultVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/CompareResultVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/CompareResultVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/CompareResultVisitor.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/SystemCommand.cpp: In destructor 'dp::impl::SystemCommand::~SystemCommand()':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/SystemCommand.cpp:119:16: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
119 | system (tmp);
| ~~~~~~~^~~~~
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[ 47%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/FilterContainerVisitor.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/FilterContainerVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/FilterContainerVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/FilterContainerVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/FilterContainerVisitor.cpp
[ 47%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/WrapperIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/WrapperIterator.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/WrapperIterator.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/WrapperIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/WrapperIterator.cpp
[ 47%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/MaxHitsPerQueryVisitor.cpp
[ 48%] Building CXX object CMakeFiles/plast.dir/src/designpattern/impl/XmlReader.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/designpattern/impl/XmlReader.cpp.o -MF CMakeFiles/plast.dir/src/designpattern/impl/XmlReader.cpp.o.d -o CMakeFiles/plast.dir/src/designpattern/impl/XmlReader.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/XmlReader.cpp
[ 48%] Building CXX object CMakeFiles/plast.dir/src/index/impl/AbstractDatabaseIndex.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/index/impl/AbstractDatabaseIndex.cpp.o -MF CMakeFiles/plast.dir/src/index/impl/AbstractDatabaseIndex.cpp.o.d -o CMakeFiles/plast.dir/src/index/impl/AbstractDatabaseIndex.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/AbstractDatabaseIndex.cpp
[ 49%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ModelBuilderVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/ModelBuilderVisitor.cpp
[ 49%] Building CXX object CMakeFiles/plast.dir/src/index/impl/DatabaseIndex.cpp.o
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/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/NucleotidConversionVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/NucleotidConversionVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/NucleotidConversionVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/NucleotidConversionVisitor.cpp
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In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IAlphabet.hpp:41,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IWord.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequence.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceIterator.hpp:34,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceDatabase.hpp:36,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/index/impl/AbstractDatabaseIndex.hpp:28,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/index/impl/DatabaseIndex.hpp:28,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/DatabaseIndex.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o -MF CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o.d -o CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/DatabaseNucleotidIndex.cpp
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
inlined from 'virtual seed::ISeedIterator* indexation::impl::DatabaseIndexCodonStopOptim::createSeedsIterator(const database::IWord&)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/DatabaseIndex.cpp:677:36:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
inlined from 'virtual seed::ISeedIterator* indexation::impl::DatabaseIndexCodonStopOptim::createSeedsIterator(const database::IWord&)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/DatabaseIndex.cpp:678:36:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/plast.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o
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[ 51%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ReverseStrandVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/ReverseStrandVisitor.cpp
[ 51%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/ShrinkContainerVisitor.cpp
[ 52%] Building C object CMakeFiles/plast.dir/src/index/impl/retrievall.c.o
/usr/bin/cc -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/index/impl/retrievall.c.o -MF CMakeFiles/plast.dir/src/index/impl/retrievall.c.o.d -o CMakeFiles/plast.dir/src/index/impl/retrievall.c.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/retrievall.c
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/retrievall.c:1075:16: warning: 'get_bits_value' is static but used in inline function 'get_packed_value' which is not static
1075 | return get_bits_value(retr->packed_table,count,retr->vals_length,retr->bits_mask);
| ^~~~~~~~~~~~~~
[ 53%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/SortContainerVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/SortContainerVisitor.cpp
[ 53%] Building CXX object CMakeFiles/plast.dir/src/launcher/core/PlastCmd.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/core/PlastCmd.cpp.o -MF CMakeFiles/plast.dir/src/launcher/core/PlastCmd.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/core/PlastCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/core/PlastCmd.cpp
[ 53%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/TabulatedOutputVisitor.cpp
[ 53%] Building CXX object CMakeFiles/plast.dir/src/launcher/core/PlastOptionsParser.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/core/PlastOptionsParser.cpp.o -MF CMakeFiles/plast.dir/src/launcher/core/PlastOptionsParser.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/core/PlastOptionsParser.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/core/PlastOptionsParser.cpp
[ 53%] Building CXX object CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/alignment/visitors/impl/XmlOutputVisitor.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/alignment/visitors/impl/XmlOutputVisitor.cpp
[ 54%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/AbstractSequenceIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/AbstractSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/AbstractSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/AbstractSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/AbstractSequenceIterator.cpp
[ 54%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BasicSequenceBuilder.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BasicSequenceBuilder.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BasicSequenceBuilder.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BasicSequenceBuilder.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BasicSequenceBuilder.cpp
[ 54%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbAsn1HeaderDecoder.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbAsn1HeaderDecoder.cpp
[ 55%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbDatabaseQuickReader.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbDatabaseQuickReader.cpp
[ 55%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbFileIndexReader.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbFileIndexReader.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbFileIndexReader.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbFileIndexReader.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbFileIndexReader.cpp
[ 56%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/Helper.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/Helper.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/Helper.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/Helper.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/Helper.cpp
[ 56%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/Wrapper.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/Wrapper.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/Wrapper.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/Wrapper.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/Wrapper.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IDatabaseQuickReader.hpp:39,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/impl/BlastdbDatabaseQuickReader.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbDatabaseQuickReader.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'virtual void database::impl::BlastdbDatabaseQuickReader::read(u_int64_t)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbDatabaseQuickReader.cpp:146:26:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'virtual void database::impl::BlastdbDatabaseQuickReader::read(u_int64_t)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbDatabaseQuickReader.cpp:152:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbSequenceIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BlastdbSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BlastdbSequenceIterator.cpp
[ 57%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Hit.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Hit.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Hit.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Hit.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Hit.cpp
[ 58%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedCachedSequenceDatabase.cpp.o
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[ 58%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp
[ 58%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp
[ 58%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedSequenceDatabase.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedSequenceDatabase.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedSequenceDatabase.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/BufferedSequenceDatabase.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/BufferedSequenceDatabase.cpp
[ 59%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp
[ 59%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp
[ 59%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/CompositeSequenceDatabase.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/CompositeSequenceDatabase.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/CompositeSequenceDatabase.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/CompositeSequenceDatabase.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/CompositeSequenceDatabase.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp: In function 'jlong Java_org_inria_genscale_dbscan_impl_plast_RequestManager_createPeerRequest(JNIEnv*, jobject, jobject)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp:316:1: warning: control reaches end of non-void function [-Wreturn-type]
316 | }
| ^
[ 59%] Building CXX object CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o -MF CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp
[ 60%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AbstractProgressionObserver.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IAlphabet.hpp:41,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IWord.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequence.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceIterator.hpp:34,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceDatabase.hpp:36,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/impl/CompositeSequenceDatabase.hpp:31,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/CompositeSequenceDatabase.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
inlined from 'database::impl::CompositeSequenceDatabase::CompositeSequenceDatabase(std::__cxx11::list<database::ISequenceDatabase*>)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/CompositeSequenceDatabase.cpp:48:33:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'database::impl::CompositeSequenceDatabase::CompositeSequenceDatabase(std::__cxx11::list<database::ISequenceDatabase*>)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/CompositeSequenceDatabase.cpp:67:37:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/DefaultAlphabet.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/DefaultAlphabet.cpp
[ 61%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/FastaDatabaseQuickReader.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp
[ 61%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AlgoExecutionObserver.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AbstractProgressionObserver.cpp: In member function 'std::string launcher::observers::AbstractProgressionObserver::getTimeString(u_int32_t)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AbstractProgressionObserver.cpp:201:44: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
201 | snprintf (buffer, sizeof(buffer), "%02ld:%02ld:%2.2f", h, m, (float)s/1000.0);
| ~~~~^ ~
| | |
| long int size_t {aka unsigned int}
| %02d
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AbstractProgressionObserver.cpp:201:50: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
201 | snprintf (buffer, sizeof(buffer), "%02ld:%02ld:%2.2f", h, m, (float)s/1000.0);
| ~~~~^ ~
| | |
| long int size_t {aka unsigned int}
| %02d
[ 62%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaSequenceIterator.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp: In member function 'virtual int database::impl::FastaDatabaseQuickReader::load(const std::string&)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:200:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
200 | fread (&magic, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:211:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
211 | fread (&len, sizeof(size_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:215:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
215 | fread (buffer, sizeof(char), len, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:231:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
231 | fread (&_totalSize, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:234:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
234 | fread (&_dataSize, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:237:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
237 | fread (&_nbSequences, sizeof(u_int32_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:240:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
240 | fread (&_dbKind, sizeof(DatabaseKind_e), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:243:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
243 | fread (&_maxblocksize, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:247:15: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
247 | fread (&nbOffsets, sizeof(size_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:253:19: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
253 | fread (&offset, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp: In static member function 'static bool database::impl::FastaDatabaseQuickReader::isQuickReaderFile(const std::string&)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:373:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
373 | u_int64_t magic = 0; fread (&magic, sizeof(u_int64_t), 1, file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AlgoHitsResultObserver.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IDatabaseQuickReader.hpp:39,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/impl/FastaDatabaseQuickReader.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'virtual void database::impl::FastaDatabaseQuickReader::read(u_int64_t)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:121:40:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'virtual void database::impl::FastaDatabaseQuickReader::read(u_int64_t)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:164:24:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'virtual int database::impl::FastaDatabaseQuickReader::load(const std::string&)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaDatabaseQuickReader.cpp:254:32:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceOutput.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceOutput.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceOutput.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/FastaSequenceOutput.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/FastaSequenceOutput.cpp
[ 62%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceDatabase.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/ReadingFrameSequenceDatabase.cpp
[ 63%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/AlgoResultObserver.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/AlgoResultObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/AlgoResultObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/AlgoResultObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AlgoResultObserver.cpp
[ 64%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/ReadingFrameSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/ReadingFrameSequenceIterator.cpp
[ 64%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/ReverseStrandSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/ReverseStrandSequenceIterator.cpp
[ 64%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/BargraphObserver.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/BargraphObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/BargraphObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/BargraphObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp
[ 64%] Building CXX object CMakeFiles/plast.dir/src/launcher/observers/FileProgressionObserver.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/launcher/observers/FileProgressionObserver.cpp.o -MF CMakeFiles/plast.dir/src/launcher/observers/FileProgressionObserver.cpp.o.d -o CMakeFiles/plast.dir/src/launcher/observers/FileProgressionObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/FileProgressionObserver.cpp
[ 64%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/Sequence.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/Sequence.cpp
[ 65%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/SequenceTokenizer.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/SequenceTokenizer.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/SequenceTokenizer.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/SequenceTokenizer.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/SequenceTokenizer.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp: In member function 'void launcher::observers::BargraphObserver::fillTimeBuffer(u_int32_t, char*)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp:151:27: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
151 | sprintf (buffer, "%02ld:%02ld:%02ld", h, m, s);
| ~~~~^ ~
| | |
| long int size_t {aka unsigned int}
| %02d
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp:151:33: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
151 | sprintf (buffer, "%02ld:%02ld:%02ld", h, m, s);
| ~~~~^ ~
| | |
| long int size_t {aka unsigned int}
| %02d
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp:151:39: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
151 | sprintf (buffer, "%02ld:%02ld:%02ld", h, m, s);
| ~~~~^ ~
| | |
| long int size_t {aka unsigned int}
| %02d
[ 66%] Building CXX object CMakeFiles/plast.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o -MF CMakeFiles/plast.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o.d -o CMakeFiles/plast.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/api/CompleteSubjectDatabaseStats.cpp
[ 66%] Building CXX object CMakeFiles/PlastLibrary.dir/src/database/impl/StringSequenceIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/database/impl/StringSequenceIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/database/impl/StringSequenceIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/database/impl/StringSequenceIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/database/impl/StringSequenceIterator.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/FileProgressionObserver.cpp: In destructor 'virtual launcher::observers::AlignmentProgressionObserver::~AlignmentProgressionObserver()':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/FileProgressionObserver.cpp:162:32: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
162 | fprintf (_file, "%ld %.3f %.6f %d %d %.6f %.6f %.6f\n",
| ~~^
| |
| long int
| %d
163 | i,
| ~
| |
| size_t {aka unsigned int}
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/FileProgressionObserver.cpp: In member function 'virtual void launcher::observers::ResourcesObserver::update(dp::EventInfo*, dp::ISubject*)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/FileProgressionObserver.cpp:256:32: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
256 | fprintf (_file, "%ld %.3f %lld %lld %.3f %.3f %.3f %d %lld %lld \n",
| ~~^
| |
| long int
| %d
257 | _currentAlgo,
| ~~~~~~~~~~~~
| |
| size_t {aka unsigned int}
[ 66%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/CommandDispatcher.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/CommandDispatcher.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/CommandDispatcher.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/CommandDispatcher.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/CommandDispatcher.cpp
[ 66%] Building CXX object CMakeFiles/plast.dir/src/misc/impl/ObsfucatedString.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/misc/impl/ObsfucatedString.cpp.o -MF CMakeFiles/plast.dir/src/misc/impl/ObsfucatedString.cpp.o.d -o CMakeFiles/plast.dir/src/misc/impl/ObsfucatedString.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp
[ 67%] Building CXX object CMakeFiles/plast.dir/src/misc/impl/OptionsParser.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/misc/impl/OptionsParser.cpp.o -MF CMakeFiles/plast.dir/src/misc/impl/OptionsParser.cpp.o.d -o CMakeFiles/plast.dir/src/misc/impl/OptionsParser.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/OptionsParser.cpp
[ 68%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/ConfigFileProperties.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/ConfigFileProperties.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/ConfigFileProperties.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/ConfigFileProperties.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/ConfigFileProperties.cpp
[ 68%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/DirectoryIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/DirectoryIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/DirectoryIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/DirectoryIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/DirectoryIterator.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp:9:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'misc::impl::ObsfucatedString::ObsfucatedString(LONG, ...)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp:37:26:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'misc::impl::ObsfucatedString::ObsfucatedString(LONG, ...)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp:41:83:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'static std::string misc::impl::ObsfucatedString::obsfucate(const std::string&)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp:125:29:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'static std::string misc::impl::ObsfucatedString::obsfucate(const std::string&)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp:132:33:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 68%] Building CXX object CMakeFiles/plast.dir/src/misc/impl/RangeTree.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/misc/impl/RangeTree.cpp.o -MF CMakeFiles/plast.dir/src/misc/impl/RangeTree.cpp.o.d -o CMakeFiles/plast.dir/src/misc/impl/RangeTree.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/RangeTree.cpp
[ 68%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/FileLineIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/FileLineIterator.cpp
[ 68%] Building CXX object CMakeFiles/plast.dir/src/os/impl/DefaultOsFactory.cpp.o
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[ 70%] Building CXX object CMakeFiles/plast.dir/src/os/impl/LinuxMemoryFile.cpp.o
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/<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/LinuxFile.cpp: In destructor 'os::impl::LinuxFile::~LinuxFile()':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/LinuxFile.cpp:42:20: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
42 | system (ss.str().c_str());
| ~~~~~~~^~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/LinuxMemory.cpp: In member function 'virtual u_int32_t os::impl::LinuxMemoryAllocator::getMemUsage()':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/LinuxMemory.cpp:46:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
46 | fgets (buffer, sizeof(buffer), file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/PlastLibrary.dir/src/designpattern/impl/SystemCommand.cpp.o
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/<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/SystemCommand.cpp: In destructor 'dp::impl::SystemCommand::~SystemCommand()':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/designpattern/impl/SystemCommand.cpp:119:16: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
119 | system (tmp);
| ~~~~~~~^~~~~
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/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/WindowsMemoryFile.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/WindowsMemoryFile.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/WindowsMemoryFile.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/WindowsMemoryFile.cpp
[ 76%] Building CXX object CMakeFiles/plast.dir/src/os/impl/WindowsThread.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/WindowsThread.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/WindowsThread.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/WindowsThread.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/WindowsThread.cpp
[ 77%] Building CXX object CMakeFiles/plast.dir/src/os/impl/WindowsTime.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/WindowsTime.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/WindowsTime.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/WindowsTime.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/WindowsTime.cpp
[ 77%] Building CXX object CMakeFiles/plast.dir/src/os/impl/ZlibFile.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/os/impl/ZlibFile.cpp.o -MF CMakeFiles/plast.dir/src/os/impl/ZlibFile.cpp.o.d -o CMakeFiles/plast.dir/src/os/impl/ZlibFile.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/ZlibFile.cpp
[ 77%] Building CXX object CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/DatabaseIndex.cpp
[ 77%] Building CXX object CMakeFiles/plast.dir/src/seed/impl/AbstractSeedIterator.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/seed/impl/AbstractSeedIterator.cpp.o -MF CMakeFiles/plast.dir/src/seed/impl/AbstractSeedIterator.cpp.o.d -o CMakeFiles/plast.dir/src/seed/impl/AbstractSeedIterator.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/AbstractSeedIterator.cpp
[ 78%] Building CXX object CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndexHash.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndexHash.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndexHash.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndexHash.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/DatabaseIndexHash.cpp
[ 79%] Building CXX object CMakeFiles/plast.dir/src/seed/impl/AbstractSeedModel.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/seed/impl/AbstractSeedModel.cpp.o -MF CMakeFiles/plast.dir/src/seed/impl/AbstractSeedModel.cpp.o.d -o CMakeFiles/plast.dir/src/seed/impl/AbstractSeedModel.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/AbstractSeedModel.cpp
[ 79%] Building CXX object CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/DatabaseNucleotidIndex.cpp
[ 79%] Building CXX object CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/DatabaseNucleotidIndexOptim.cpp
[ 79%] Building CXX object CMakeFiles/plast.dir/src/seed/impl/BasicSeedModel.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/seed/impl/BasicSeedModel.cpp.o -MF CMakeFiles/plast.dir/src/seed/impl/BasicSeedModel.cpp.o.d -o CMakeFiles/plast.dir/src/seed/impl/BasicSeedModel.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/BasicSeedModel.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IAlphabet.hpp:41,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/IWord.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequence.hpp:30,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceIterator.hpp:34,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/database/api/ISequenceDatabase.hpp:36,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/index/impl/AbstractDatabaseIndex.hpp:28,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include/index/impl/DatabaseIndex.hpp:28,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/DatabaseIndex.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
inlined from 'virtual seed::ISeedIterator* indexation::impl::DatabaseIndexCodonStopOptim::createSeedsIterator(const database::IWord&)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/DatabaseIndex.cpp:677:36:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
inlined from 'virtual seed::ISeedIterator* indexation::impl::DatabaseIndexCodonStopOptim::createSeedsIterator(const database::IWord&)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/DatabaseIndex.cpp:678:36:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 79%] Building CXX object CMakeFiles/plast.dir/src/seed/impl/SubSeedModel.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/seed/impl/SubSeedModel.cpp.o -MF CMakeFiles/plast.dir/src/seed/impl/SubSeedModel.cpp.o.d -o CMakeFiles/plast.dir/src/seed/impl/SubSeedModel.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.cpp: In member function 'void seed::impl::SubSeedModel::dump()':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.cpp:243:21: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
243 | printf ("[%ld/%ld] ", i, _span);
| ~~^ ~
| | |
| long int size_t {aka unsigned int}
| %d
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.cpp:243:25: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
243 | printf ("[%ld/%ld] ", i, _span);
| ~~^ ~~~~~
| | |
| long int size_t {aka unsigned int}
| %d
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.cpp:248:25: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
248 | printf ("[%ld->%d] ", j, _equivalenceTable[i][j] );
| ~~^ ~
| | |
| long int size_t {aka unsigned int}
| %d
[ 80%] Building C object CMakeFiles/PlastLibrary.dir/src/index/impl/retrievall.c.o
/usr/bin/cc -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/index/impl/retrievall.c.o -MF CMakeFiles/PlastLibrary.dir/src/index/impl/retrievall.c.o.d -o CMakeFiles/PlastLibrary.dir/src/index/impl/retrievall.c.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/retrievall.c
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/index/impl/retrievall.c:1075:16: warning: 'get_bits_value' is static but used in inline function 'get_packed_value' which is not static
1075 | return get_bits_value(retr->packed_table,count,retr->vals_length,retr->bits_mask);
| ^~~~~~~~~~~~~~
[ 81%] Building CXX object CMakeFiles/plast.dir/src/seg/impl/DustMasker.cpp.o
/usr/bin/c++ -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/seg/impl/DustMasker.cpp.o -MF CMakeFiles/plast.dir/src/seg/impl/DustMasker.cpp.o.d -o CMakeFiles/plast.dir/src/seg/impl/DustMasker.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/seg/impl/DustMasker.cpp
[ 81%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastCmd.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastCmd.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastCmd.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/core/PlastCmd.cpp
[ 81%] Building C object CMakeFiles/plast.dir/src/seg/impl/dust.c.o
/usr/bin/cc -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/seg/impl/dust.c.o -MF CMakeFiles/plast.dir/src/seg/impl/dust.c.o.d -o CMakeFiles/plast.dir/src/seg/impl/dust.c.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/seg/impl/dust.c
[ 81%] Building C object CMakeFiles/plast.dir/src/seg/impl/genwin.c.o
/usr/bin/cc -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/plast.dir/src/seg/impl/genwin.c.o -MF CMakeFiles/plast.dir/src/seg/impl/genwin.c.o.d -o CMakeFiles/plast.dir/src/seg/impl/genwin.c.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/seg/impl/genwin.c
[ 81%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastOptionsParser.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastOptionsParser.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastOptionsParser.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastOptionsParser.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/core/PlastOptionsParser.cpp
[ 82%] Building C object CMakeFiles/plast.dir/src/seg/impl/seg.c.o
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[ 83%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/jni/Wrapper.cpp.o
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/<<BUILDDIR>>/plast-2.3.2+dfsg/src/tools/PlastCmd.cpp: In function 'int main(int, char**)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/tools/PlastCmd.cpp:120:104: warning: format '%ld' expects argument of type 'long int', but argument 8 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
120 | fprintf (stdout, "%s %s\n - Build date: %s\n - OS: %s\n - Compiler: %s\n - Host CPU: %ld cores available\n\n",
| ~~^
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| long int
| %d
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126 | os::impl::DefaultFactory::thread().getNbCores()
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| |
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[ 84%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Hit.cpp.o
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/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp
[ 87%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AbstractProgressionObserver.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp: In function 'jlong Java_org_inria_genscale_dbscan_impl_plast_RequestManager_createPeerRequest(JNIEnv*, jobject, jobject)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp:316:1: warning: control reaches end of non-void function [-Wreturn-type]
316 | }
| ^
[ 87%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AlgoExecutionObserver.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AbstractProgressionObserver.cpp: In member function 'std::string launcher::observers::AbstractProgressionObserver::getTimeString(u_int32_t)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AbstractProgressionObserver.cpp:201:44: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
201 | snprintf (buffer, sizeof(buffer), "%02ld:%02ld:%2.2f", h, m, (float)s/1000.0);
| ~~~~^ ~
| | |
| long int size_t {aka unsigned int}
| %02d
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AbstractProgressionObserver.cpp:201:50: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
201 | snprintf (buffer, sizeof(buffer), "%02ld:%02ld:%2.2f", h, m, (float)s/1000.0);
| ~~~~^ ~
| | |
| long int size_t {aka unsigned int}
| %02d
[ 87%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AlgoHitsResultObserver.cpp
[ 88%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoResultObserver.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoResultObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoResultObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoResultObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/AlgoResultObserver.cpp
[ 88%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/BargraphObserver.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/BargraphObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/BargraphObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/BargraphObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp
[ 88%] Building CXX object CMakeFiles/PlastLibrary.dir/src/launcher/observers/FileProgressionObserver.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/launcher/observers/FileProgressionObserver.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/launcher/observers/FileProgressionObserver.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/launcher/observers/FileProgressionObserver.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/FileProgressionObserver.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp: In member function 'void launcher::observers::BargraphObserver::fillTimeBuffer(u_int32_t, char*)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp:151:27: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
151 | sprintf (buffer, "%02ld:%02ld:%02ld", h, m, s);
| ~~~~^ ~
| | |
| long int size_t {aka unsigned int}
| %02d
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp:151:33: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
151 | sprintf (buffer, "%02ld:%02ld:%02ld", h, m, s);
| ~~~~^ ~
| | |
| long int size_t {aka unsigned int}
| %02d
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/BargraphObserver.cpp:151:39: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
151 | sprintf (buffer, "%02ld:%02ld:%02ld", h, m, s);
| ~~~~^ ~
| | |
| long int size_t {aka unsigned int}
| %02d
[ 89%] Building CXX object CMakeFiles/PlastLibrary.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/api/CompleteSubjectDatabaseStats.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/FileProgressionObserver.cpp: In destructor 'virtual launcher::observers::AlignmentProgressionObserver::~AlignmentProgressionObserver()':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/FileProgressionObserver.cpp:162:32: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
162 | fprintf (_file, "%ld %.3f %.6f %d %d %.6f %.6f %.6f\n",
| ~~^
| |
| long int
| %d
163 | i,
| ~
| |
| size_t {aka unsigned int}
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/FileProgressionObserver.cpp: In member function 'virtual void launcher::observers::ResourcesObserver::update(dp::EventInfo*, dp::ISubject*)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/launcher/observers/FileProgressionObserver.cpp:256:32: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
256 | fprintf (_file, "%ld %.3f %lld %lld %.3f %.3f %.3f %d %lld %lld \n",
| ~~^
| |
| long int
| %d
257 | _currentAlgo,
| ~~~~~~~~~~~~
| |
| size_t {aka unsigned int}
[ 89%] Building CXX object CMakeFiles/PlastLibrary.dir/src/misc/impl/ObsfucatedString.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/misc/impl/ObsfucatedString.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/misc/impl/ObsfucatedString.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/misc/impl/ObsfucatedString.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp
[ 90%] Building CXX object CMakeFiles/PlastLibrary.dir/src/misc/impl/OptionsParser.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/misc/impl/OptionsParser.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/misc/impl/OptionsParser.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/misc/impl/OptionsParser.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/OptionsParser.cpp
[ 90%] Building CXX object CMakeFiles/PlastLibrary.dir/src/misc/impl/RangeTree.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/misc/impl/RangeTree.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/misc/impl/RangeTree.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/misc/impl/RangeTree.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/RangeTree.cpp
[ 90%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/DefaultOsFactory.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/DefaultOsFactory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/DefaultOsFactory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/DefaultOsFactory.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/DefaultOsFactory.cpp
[ 91%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxFile.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxFile.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxFile.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxFile.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/LinuxFile.cpp
In file included from /usr/include/c++/12/vector:70,
from /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp:9:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'misc::impl::ObsfucatedString::ObsfucatedString(LONG, ...)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp:37:26:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'misc::impl::ObsfucatedString::ObsfucatedString(LONG, ...)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp:41:83:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'static std::string misc::impl::ObsfucatedString::obsfucate(const std::string&)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp:125:29:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'static std::string misc::impl::ObsfucatedString::obsfucate(const std::string&)' at /<<BUILDDIR>>/plast-2.3.2+dfsg/src/misc/impl/ObsfucatedString.cpp:132:33:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 91%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/LinuxMemory.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/LinuxFile.cpp: In destructor 'os::impl::LinuxFile::~LinuxFile()':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/LinuxFile.cpp:42:20: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
42 | system (ss.str().c_str());
| ~~~~~~~^~~~~~~~~~~~~~~~~~
[ 91%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/LinuxMemoryFile.cpp
[ 92%] Building CXX object CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxThread.cpp.o
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/<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/LinuxMemory.cpp: In member function 'virtual u_int32_t os::impl::LinuxMemoryAllocator::getMemUsage()':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/os/impl/LinuxMemory.cpp:46:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
46 | fgets (buffer, sizeof(buffer), file);
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.cpp: In member function 'void seed::impl::SubSeedModel::dump()':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.cpp:243:21: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
243 | printf ("[%ld/%ld] ", i, _span);
| ~~^ ~
| | |
| long int size_t {aka unsigned int}
| %d
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.cpp:243:25: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
243 | printf ("[%ld/%ld] ", i, _span);
| ~~^ ~~~~~
| | |
| long int size_t {aka unsigned int}
| %d
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/seed/impl/SubSeedModel.cpp:248:25: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
248 | printf ("[%ld->%d] ", j, _equivalenceTable[i][j] );
| ~~^ ~
| | |
| long int size_t {aka unsigned int}
| %d
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/usr/bin/cc -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/seg/impl/seg.c.o -MF CMakeFiles/PlastLibrary.dir/src/seg/impl/seg.c.o.d -o CMakeFiles/PlastLibrary.dir/src/seg/impl/seg.c.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/seg/impl/seg.c
[ 99%] Building CXX object CMakeFiles/PlastLibrary.dir/src/tools/PlastCmd.cpp.o
/usr/bin/c++ -DPlastLibrary_EXPORTS -D__LINUX__ -I/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/include -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/plast-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -funroll-loops -fomit-frame-pointer -MD -MT CMakeFiles/PlastLibrary.dir/src/tools/PlastCmd.cpp.o -MF CMakeFiles/PlastLibrary.dir/src/tools/PlastCmd.cpp.o.d -o CMakeFiles/PlastLibrary.dir/src/tools/PlastCmd.cpp.o -c /<<BUILDDIR>>/plast-2.3.2+dfsg/src/tools/PlastCmd.cpp
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/tools/PlastCmd.cpp: In function 'int main(int, char**)':
/<<BUILDDIR>>/plast-2.3.2+dfsg/src/tools/PlastCmd.cpp:120:104: warning: format '%ld' expects argument of type 'long int', but argument 8 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
120 | fprintf (stdout, "%s %s\n - Build date: %s\n - OS: %s\n - Compiler: %s\n - Host CPU: %ld cores available\n\n",
| ~~^
| |
| long int
| %d
......
126 | os::impl::DefaultFactory::thread().getNbCores()
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| |
| size_t {aka unsigned int}
[100%] Linking CXX shared library lib/None/libPlastLibrary.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/PlastLibrary.dir/link.txt --verbose=1
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CMakeFiles/PlastLibrary.dir/src/designpattern/impl/WrapperIterator.cpp.o CMakeFiles/PlastLibrary.dir/src/designpattern/impl/XmlReader.cpp.o CMakeFiles/PlastLibrary.dir/src/index/impl/AbstractDatabaseIndex.cpp.o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndex.cpp.o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseIndexHash.cpp.o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndex.cpp.o CMakeFiles/PlastLibrary.dir/src/index/impl/DatabaseNucleotidIndexOptim.cpp.o CMakeFiles/PlastLibrary.dir/src/index/impl/retrievall.c.o CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastCmd.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/core/PlastOptionsParser.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/jni/Helper.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/jni/Wrapper.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Hit.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AbstractProgressionObserver.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoExecutionObserver.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoHitsResultObserver.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/observers/AlgoResultObserver.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/observers/BargraphObserver.cpp.o CMakeFiles/PlastLibrary.dir/src/launcher/observers/FileProgressionObserver.cpp.o CMakeFiles/PlastLibrary.dir/src/misc/api/CompleteSubjectDatabaseStats.cpp.o CMakeFiles/PlastLibrary.dir/src/misc/impl/ObsfucatedString.cpp.o CMakeFiles/PlastLibrary.dir/src/misc/impl/OptionsParser.cpp.o CMakeFiles/PlastLibrary.dir/src/misc/impl/RangeTree.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/DefaultOsFactory.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemory.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxMemoryFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxThread.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/LinuxTime.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemory.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsMemoryFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsThread.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/MacOsTime.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemory.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsMemoryFile.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsThread.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/WindowsTime.cpp.o CMakeFiles/PlastLibrary.dir/src/os/impl/ZlibFile.cpp.o CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedIterator.cpp.o CMakeFiles/PlastLibrary.dir/src/seed/impl/AbstractSeedModel.cpp.o CMakeFiles/PlastLibrary.dir/src/seed/impl/BasicSeedModel.cpp.o CMakeFiles/PlastLibrary.dir/src/seed/impl/SubSeedModel.cpp.o CMakeFiles/PlastLibrary.dir/src/seg/impl/DustMasker.cpp.o CMakeFiles/PlastLibrary.dir/src/seg/impl/dust.c.o CMakeFiles/PlastLibrary.dir/src/seg/impl/genwin.c.o CMakeFiles/PlastLibrary.dir/src/seg/impl/seg.c.o CMakeFiles/PlastLibrary.dir/src/tools/PlastCmd.cpp.o
make[4]: Leaving directory '/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target PlastLibrary
make[3]: Leaving directory '/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 0
make[2]: Leaving directory '/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf'
make[1]: Leaving directory '/<<BUILDDIR>>/plast-2.3.2+dfsg'
debian/rules override_dh_auto_test-arch
make[1]: Entering directory '/<<BUILDDIR>>/plast-2.3.2+dfsg'
scripts/test-plast.sh
Start PLAST...
obj-arm-linux-gnueabihf/bin/None/plast -p plastp -i /<<BUILDDIR>>/plast-2.3.2+dfsg/db/query.fa -d /<<BUILDDIR>>/plast-2.3.2+dfsg/db/tursiops.fa -o obj-arm-linux-gnueabihf/bin/None/out.txt
*** SUCCESS: result file is: obj-arm-linux-gnueabihf/bin/None/out.txt
make[1]: Leaving directory '/<<BUILDDIR>>/plast-2.3.2+dfsg'
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=cmake
dh_prep -a -O--buildsystem=cmake
dh_installdirs -a -O--buildsystem=cmake
dh_auto_install -a -O--buildsystem=cmake
cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<BUILDDIR>>/plast-2.3.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<BUILDDIR>>/plast-2.3.2+dfsg -B/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/BasicSequenceBuilder.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/CompositeSequenceDatabase.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/FastaSequenceIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/BlastdbSequenceIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/BlastdbDatabaseQuickReader.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/AminoAcidDatabaseQuickReader.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/BlastdbFileIndexReader.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/AbstractSequenceIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/ReadingFrameSequenceIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/FastaSequenceOutput.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/BufferedSequenceDatabase.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/TruncatedSequenceIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/StringSequenceIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/ReadingFrameSequenceDatabase.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/DatabaseVisitorComment.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/ReverseStrandSequenceIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/BlastdbAsn1HeaderDecoder.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/SequenceTokenizer.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/FastaDatabaseQuickReader.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/BufferedCachedSequenceDatabase.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/impl/DatabaseUtility.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/api/ISequenceDatabase.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/api/ISequenceCache.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/api/ISequenceIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/api/ISequenceBuilder.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/api/IDatabaseQuickReader.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/api/IAlphabet.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/api/ISequence.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/database/api/IWord.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/index
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/index/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/index/impl/AbstractDatabaseIndex.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/index/impl/DatabaseNucleotidIndexOptim.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/index/impl/DatabaseIndex.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/index/impl/retrievall.h
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/index/impl/DatabaseIndexHash.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/index/impl/DatabaseNucleotidIndex.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/index/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/index/api/IDatabaseIndex.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/index/api/IOccurrenceIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/impl/BasicAlignmentContainer.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/impl/UngapAlignmentContainer.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/impl/HspContainer.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/impl/NullAlignmentContainer.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/impl/AlignmentContainerFactory.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/impl/AbstractAlignmentContainer.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/impl/ReaderAlignmentContainer.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/api/IAlignmentContainerModel.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/api/IHspContainer.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/api/IAlignmentContainerVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/api/IAlignmentContainerFactory.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/api/Alignment.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/core/api/IAlignmentContainer.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/tools
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/tools/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/tools/impl/AlignmentSplitterBanded.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/tools/impl/AlignmentSplitter.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/tools/impl/AlignmentOverlapCmd.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/tools/impl/SemiGappedAlign.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/tools/impl/AlignmentContainerShrinkCmd.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/tools/impl/SemiGappedAlignTraceback.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/tools/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/tools/api/IAlignmentSplitter.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/tools/api/ISemiGappedAlign.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/filter
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/filter/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/filter/impl/AbstractAlignmentFilterFactory.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/filter/impl/AlignmentFilterFactory.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/filter/impl/AlignmentFilterXML.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/filter/impl/AlignmentFilterOperator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/filter/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/filter/api/IAlignmentFilter.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/QueryReorderVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/ProxyVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/ModelBuilderVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/ShrinkContainerVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/CompareResultVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/ModifierContainerVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/NucleotidConversionVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/HierarchyAlignmentVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/AdapterAlignmentVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/MaxHitsPerQueryVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/ReverseStrandVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/CompareContainerVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/OstreamVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/SortContainerVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/CompareResultQryVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/XmlOutputVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/TabulatedOutputVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/RawOutputVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/alignment/visitors/impl/FilterContainerVisitor.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/FileLineIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/ListIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/ConfigFileProperties.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/IteratorGet.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/SystemCommand.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/CommandDispatcher.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/Vectorterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/DirectoryIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/Property.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/EventCatch.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/WrapperIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/TokenizerIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/Observer.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/ProductIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/RangeIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/impl/XmlReader.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/api/IProperty.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/api/IObserver.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/api/ICommand.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/api/SmartPointer.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/designpattern/api/Iterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/tools
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seg
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seg/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seg/impl/lnfac.pri
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seg/impl/DustMasker.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seg/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seg/api/seg.h
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seg/api/genwin.h
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/impl/AlgorithmPlastn.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/impl/AbstractAlgorithm.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/impl/PlastnAlgoConfig.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/impl/AlgoIndexatorNucleotide.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/impl/DefaultAlgoConfig.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/impl/DefaultAlgoEnvironment.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/impl/BasicAlgoIndexator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/impl/DatabasesProvider.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/impl/ScoreMatrix.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/api/IDatabasesProvider.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/api/IAlgoIndexator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/api/IScoreMatrix.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/api/IAlgorithm.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/api/IAlgoParameters.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/api/IAlgoEnvironment.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/api/IAlgoEvents.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/core/api/IAlgoConfig.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/stats
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/stats/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/stats/impl/Statistics.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/stats/impl/StatisticsSpouge.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/stats/impl/StatisticsPlastn.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/stats/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/stats/api/IStatistics.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/ungap
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/ungap/UngapHitIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/ungap/UngapHitIteratorSSE8.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/ungap/UngapHitIteratorNull.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/ungap/UngapHitIteratorSSE16.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/ungap/UngapExtendHitIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/common
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/common/AbstractHitIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/common/AbstractPipeHitIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/api/IHitIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/gap
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/gap/FullGapHitIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/gap/SmallGapHitIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/gap/SmallGapHitIteratorNull.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/gap/CompositionHitIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/gap/SmallGapHitIteratorSSE8.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/hsp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/hsp/HspGeneratorCmd.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/hsp/AlignmentGeneratorCmd.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/hsp/HspExtensionCmd.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/seed
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/seed/SeedHitIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/algo/hits/seed/SeedHitIteratorCached.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/core
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/core/PlastOptionsParser.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/core/PlastCmd.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/jni
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/jni/org_inria_genscale_dbscan_impl_plast_Hit.h
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/jni/Wrapper.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestResult.h
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/jni/Helper.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestManager.h
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/jni/org_inria_genscale_dbscan_impl_plast_RequestController.h
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/jni/org_inria_genscale_dbscan_impl_plast_QueryResult.h
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/jni/org_inria_genscale_dbscan_impl_plast_Request.h
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/jni/JniObsfucation.h
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/observers
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/observers/AlgoHitsResultObserver.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/observers/FileProgressionObserver.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/observers/AlgoExecutionObserver.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/observers/AbstractProgressionObserver.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/observers/AlgoResultObserver.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/observers/BargraphObserver.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/launcher/observers/AbstractObserver.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/impl/ObsfucatedString.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/impl/OptionsParser.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/impl/Option.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/api/CompleteSubjectDatabaseStats.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/api/PlastStringsRepository.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/api/macros.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/api/PlastStrings.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/api/RangeTree.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/api/version.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/api/obsfucation.h
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/api/types.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/misc/api/Vector.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/WindowsMemoryFile.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/LinuxFile.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/MacOsMemoryFile.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/LinuxMemoryFile.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/WindowsFile.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/ZlibFile.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/WindowsThread.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/MacOsMemory.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/MacOsFile.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/TimeTools.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/MacOsTime.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/WindowsTime.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/LinuxThread.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/MacOsThread.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/LinuxTime.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/LinuxMemory.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/CommonOsImpl.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/DefaultOsFactory.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/impl/WindowsMemory.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/api/ITime.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/api/IOsFactory.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/api/IMemoryFile.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/api/IFile.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/api/IThread.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/api/IResource.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/os/api/IMemory.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seed
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seed/impl
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seed/impl/AbstractSeedModel.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seed/impl/AbstractSeedIterator.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seed/impl/SubSeedModel.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seed/impl/BasicSeedModel.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seed/api
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seed/api/ISeed.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seed/api/ISeedModel.hpp
-- Installing: /<<BUILDDIR>>/plast-2.3.2+dfsg/debian/tmp/usr/include/seed/api/ISeedIterator.hpp
make[1]: Leaving directory '/<<BUILDDIR>>/plast-2.3.2+dfsg/obj-arm-linux-gnueabihf'
debian/rules override_dh_install-arch
make[1]: Entering directory '/<<BUILDDIR>>/plast-2.3.2+dfsg'
dh_install -a
# install binary
cp -a obj-arm-linux-gnueabihf/bin/*/plast debian/plast/usr/lib/plast/bin/
# no need for the includes
rm -rf debian/*/usr/include
make[1]: Leaving directory '/<<BUILDDIR>>/plast-2.3.2+dfsg'
dh_installdocs -a -O--buildsystem=cmake
dh_installchangelogs -a -O--buildsystem=cmake
dh_installman -a -O--buildsystem=cmake
dh_installsystemduser -a -O--buildsystem=cmake
dh_perl -a -O--buildsystem=cmake
dh_link -a -O--buildsystem=cmake
dh_strip_nondeterminism -a -O--buildsystem=cmake
dh_compress -a -O--buildsystem=cmake
dh_fixperms -a -O--buildsystem=cmake
dh_missing -a -O--buildsystem=cmake
dh_dwz -a -O--buildsystem=cmake
dh_strip -a -O--buildsystem=cmake
dh_makeshlibs -a -O--buildsystem=cmake
dh_shlibdeps -a -O--buildsystem=cmake
dpkg-shlibdeps: warning: debian/plast/usr/lib/plast/bin/plast contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/plast/usr/lib/plast/bin/plast was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -a -O--buildsystem=cmake
debian/rules override_dh_gencontrol-arch
make[1]: Entering directory '/<<BUILDDIR>>/plast-2.3.2+dfsg'
dh_gencontrol -- -Vsimde:Built-Using="simde (= 0.7.2-6), "
dpkg-gencontrol: warning: Depends field of package plast: substitution variable ${java:Depends} used, but is not defined
dpkg-gencontrol: warning: Depends field of package plast: substitution variable ${java:Depends} used, but is not defined
make[1]: Leaving directory '/<<BUILDDIR>>/plast-2.3.2+dfsg'
dh_md5sums -a -O--buildsystem=cmake
dh_builddeb -a -O--buildsystem=cmake
dpkg-deb: building package 'plast' in '../plast_2.3.2+dfsg-10_armhf.deb'.
dpkg-deb: building package 'plast-dbgsym' in '../plast-dbgsym_2.3.2+dfsg-10_armhf.deb'.
dpkg-genbuildinfo --build=any -O../plast_2.3.2+dfsg-10_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> -O../plast_2.3.2+dfsg-10_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2022-12-08T09:27:13Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
plast_2.3.2+dfsg-10_armhf.changes:
----------------------------------
Format: 1.8
Date: Mon, 05 Dec 2022 18:19:37 +0100
Source: plast
Binary: plast plast-dbgsym
Architecture: armhf
Version: 2.3.2+dfsg-10
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
plast - Parallel Local Sequence Alignment Search Tool
Changes:
plast (2.3.2+dfsg-10) unstable; urgency=medium
.
* Fix watch file
Checksums-Sha1:
03bac756f305c41f65c4d1ffc95017ce05265abd 6138128 plast-dbgsym_2.3.2+dfsg-10_armhf.deb
55fed3131651665fadcd501d99286c1dc070dc37 8929 plast_2.3.2+dfsg-10_armhf.buildinfo
051c9ee0c15a94ce0648372da7b8a3bfb57f07fc 463944 plast_2.3.2+dfsg-10_armhf.deb
Checksums-Sha256:
ba8cc20e9948decdb64359f2c825b6fd1d3c7d160e0879c949c9dd85154fa7f8 6138128 plast-dbgsym_2.3.2+dfsg-10_armhf.deb
ac66a2809069358c7d24b8a873e61ff3bcf1e8df79d91d1ed5e9e76e4a976524 8929 plast_2.3.2+dfsg-10_armhf.buildinfo
faf87c4c2f2dfaa88774bc5e2aa9ab97c98e7d3add38ab98345554825cb6ab1e 463944 plast_2.3.2+dfsg-10_armhf.deb
Files:
83903dceefda399f222543d4bd7dd625 6138128 debug optional plast-dbgsym_2.3.2+dfsg-10_armhf.deb
df7687e8e525b56c9a75ad7c91ce47eb 8929 science optional plast_2.3.2+dfsg-10_armhf.buildinfo
59e4b1a5a3d3f16f02d5293325850c3f 463944 science optional plast_2.3.2+dfsg-10_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
plast-dbgsym_2.3.2+dfsg-10_armhf.deb
------------------------------------
new Debian package, version 2.0.
size 6138128 bytes: control archive=540 bytes.
375 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: plast-dbgsym
Source: plast
Version: 2.3.2+dfsg-10
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 6360
Depends: plast (= 2.3.2+dfsg-10)
Section: debug
Priority: optional
Description: debug symbols for plast
Build-Ids: e9257a455311338f9192e0e67e5be607fb0e8647
drwxr-xr-x root/root 0 2022-12-05 17:19 ./
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/lib/
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/lib/debug/
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/lib/debug/.build-id/e9/
-rw-r--r-- root/root 6502204 2022-12-05 17:19 ./usr/lib/debug/.build-id/e9/257a455311338f9192e0e67e5be607fb0e8647.debug
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/share/
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/share/doc/
lrwxrwxrwx root/root 0 2022-12-05 17:19 ./usr/share/doc/plast-dbgsym -> plast
plast_2.3.2+dfsg-10_armhf.deb
-----------------------------
new Debian package, version 2.0.
size 463944 bytes: control archive=1032 bytes.
792 bytes, 19 lines control
509 bytes, 8 lines md5sums
Package: plast
Version: 2.3.2+dfsg-10
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1434
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.5), libpcre2-8-0 (>= 10.22), libstdc++6 (>= 11)
Built-Using: simde (= 0.7.2-6)
Section: science
Priority: optional
Homepage: https://plast.inria.fr/
Description: Parallel Local Sequence Alignment Search Tool
PLAST is a fast, accurate and NGS scalable bank-to-bank sequence
similarity search tool providing significant accelerations of seeds-
based heuristic comparison methods, such as the Blast suite of
algorithms.
.
Relying on unique software architecture, PLAST takes full advantage of
recent multi-core personal computers without requiring any additional
hardware devices.
drwxr-xr-x root/root 0 2022-12-05 17:19 ./
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/bin/
-rwxr-xr-x root/root 6493 2022-12-05 17:19 ./usr/bin/plast
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/lib/
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/lib/plast/
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/lib/plast/bin/
-rwxr-xr-x root/root 1403336 2022-12-05 17:19 ./usr/lib/plast/bin/plast
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/share/
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/share/doc/
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/share/doc/plast/
-rw-r--r-- root/root 134 2022-12-05 17:19 ./usr/share/doc/plast/README.Debian
-rw-r--r-- root/root 2650 2017-05-23 13:33 ./usr/share/doc/plast/README.md.gz
-rw-r--r-- root/root 332 2022-12-05 17:19 ./usr/share/doc/plast/README.test
-rw-r--r-- root/root 1094 2022-12-05 17:19 ./usr/share/doc/plast/changelog.Debian.gz
-rw-r--r-- root/root 35399 2022-12-05 17:19 ./usr/share/doc/plast/copyright
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/share/man/
drwxr-xr-x root/root 0 2022-12-05 17:19 ./usr/share/man/man1/
-rw-r--r-- root/root 1817 2022-12-05 17:19 ./usr/share/man/man1/plast.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 164508
Build-Time: 1758
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 1446
Job: plast_2.3.2+dfsg-10
Machine Architecture: armhf
Package: plast
Package-Time: 3268
Source-Version: 2.3.2+dfsg-10
Space: 164508
Status: successful
Version: 2.3.2+dfsg-10
--------------------------------------------------------------------------------
Finished at 2022-12-08T09:27:13Z
Build needed 00:54:28, 164508k disc space