pilercr →
1.06+dfsg-4 →
armhf → 2020-12-22 10:19:08
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| pilercr 1.06+dfsg-4 (armhf) Tue, 22 Dec 2020 10:09:53 +0000 |
+==============================================================================+
Package: pilercr
Version: 1.06+dfsg-4
Source Version: 1.06+dfsg-4
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-1c0fe5ab-14ca-4636-a117-297a3f2e98ae' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [12.0 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.0 MB]
Fetched 25.0 MB in 30s (840 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'pilercr' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/pilercr.git
Please use:
git clone https://salsa.debian.org/med-team/pilercr.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 85.3 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main pilercr 1.06+dfsg-4 (dsc) [1959 B]
Get:2 http://172.17.0.1/private bullseye-staging/main pilercr 1.06+dfsg-4 (tar) [80.1 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main pilercr 1.06+dfsg-4 (diff) [3172 B]
Fetched 85.3 kB in 0s (284 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/pilercr-Fk7sja/pilercr-1.06+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/pilercr-Fk7sja' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-sREYwA/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-sREYwA/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-sREYwA/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2879 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils krb5-locales libnss-nis libnss-nisplus libpam-cap netbase
sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 4 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (22.8 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12565 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), help2man
Filtered Build-Depends: debhelper-compat (= 13), help2man
dpkg-deb: building package 'sbuild-build-depends-pilercr-dummy' in '/<<BUILDDIR>>/resolver-sREYwA/apt_archive/sbuild-build-depends-pilercr-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-pilercr-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ Sources [497 B]
Get:5 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ Packages [576 B]
Fetched 2406 B in 1s (3285 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install pilercr build dependencies (apt-based resolver)
-------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libnss-nis libnss-nisplus libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev debhelper dh-autoreconf
dh-strip-nondeterminism dwz file gettext gettext-base groff-base help2man
intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libglib2.0-0 libicu67
liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2
libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev debhelper dh-autoreconf
dh-strip-nondeterminism dwz file gettext gettext-base groff-base help2man
intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libglib2.0-0 libicu67
liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2
libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf
sbuild-build-depends-pilercr-dummy
0 upgraded, 34 newly installed, 0 to remove and 4 not upgraded.
Need to get 18.6 MB of archives.
After this operation, 69.5 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-sREYwA/apt_archive ./ sbuild-build-depends-pilercr-dummy 0.invalid.0 [864 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf liblocale-gettext-perl armhf 1.07-4+b1 [18.3 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-12 [313 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.3 [188 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-1 [162 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13+20201015-2 [162 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.3-2 [1178 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-5 [8288 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.3 [580 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.3 [1009 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf help2man armhf 1.47.16 [181 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package liblocale-gettext-perl.
(Reading database ... 12565 files and directories currently installed.)
Preparing to unpack .../00-liblocale-gettext-perl_1.07-4+b1_armhf.deb ...
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Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ...
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Preparing to unpack .../02-groff-base_1.22.4-5_armhf.deb ...
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Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ...
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Unpacking sbuild-build-depends-pilercr-dummy (0.invalid.0) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up libicu67:armhf (67.1-5) ...
Setting up libmagic-mgc (1:5.39-3) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.66.3-2) ...
No schema files found: doing nothing.
Setting up libdebhelper-perl (13.3) ...
Setting up libmagic1:armhf (1:5.39-3) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up file (1:5.39-3) ...
Setting up autotools-dev (20180224.1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libelf1:armhf (0.182-1) ...
Setting up libxml2:armhf (2.9.10+dfsg-6.3) ...
Setting up liblocale-gettext-perl (1.07-4+b1) ...
Setting up libfile-stripnondeterminism-perl (1.9.0-1) ...
Setting up libtool (2.4.6-14) ...
Setting up m4 (1.4.18-4) ...
Setting up help2man (1.47.16) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-12) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up dwz (0.13+20201015-2) ...
Setting up groff-base (1.22.4-5) ...
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up gettext (0.19.8.1-10) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up po-debconf (1.0.21) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.3) ...
Setting up sbuild-build-depends-pilercr-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-5+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.35.1-5+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.1-1+rpi1 gcc-10_10.2.1-1+rpi1 libc6-dev_2.31-5+rpi1 libstdc++-10-dev_10.2.1-1+rpi1 libstdc++6_10.2.1-1+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1
Package versions: adduser_3.118 apt_2.1.12 autoconf_2.69-12 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1-1 binutils_2.35.1-5+rpi1 binutils-arm-linux-gnueabihf_2.35.1-5+rpi1 binutils-common_2.35.1-5+rpi1 bsdextrautils_2.36.1-2 bsdutils_1:2.36.1-2 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.1-1+rpi1 dash_0.5.11+git20200708+dd9ef66-5 debconf_1.5.74 debhelper_13.3 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13+20201015-2 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1.1 fdisk_2.36.1-2 file_1:5.39-3 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1+rpi1 g++-10_10.2.1-1+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.1-1+rpi1 gcc-10-base_10.2.1-1+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 help2man_1.47.16 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20200821-2 krb5-locales_1.18.3-4 libacl1_2.2.53-8 libapt-pkg6.0_2.1.12 libarchive-zip-perl_1.68-1 libasan6_10.2.1-1+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.1-1+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1+b1 libbinutils_2.35.1-5+rpi1 libblkid1_2.36.1-2 libbz2-1.0_1.0.8-4 libc-bin_2.31-5+rpi1 libc-dev-bin_2.31-5+rpi1 libc6_2.31-5+rpi1 libc6-dev_2.31-5+rpi1 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_10.2.1-1+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-5+rpi1 libctf0_2.35.1-5+rpi1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255+b1 libdebhelper-perl_13.3 libdpkg-perl_1.20.5+rpi1 libelf1_0.182-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-2 libffi7_3.3-5 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.1-1+rpi1 libgcc-s1_10.2.1-1+rpi1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.3-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.6.15-4 libgomp1_10.2.1-1+rpi1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-4 libhogweed6_3.6-2 libicu67_67.1-5 libidn2-0_2.3.0-4 libisl23_0.23-1 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 libksba8_1.5.0-2 libldap-2.4-2_2.4.56+dfsg-1+rpi1+b1 libldap-common_2.4.56+dfsg-1+rpi1 liblocale-gettext-perl_1.07-4+b1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncursesw6_6.2+20201114-1 libnettle8_3.6-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libp11-kit0_0.23.21-2 libpam-cap_1:2.44-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libreadline8_8.1-1 librust-rand-core-dev_0.5.1-1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3+rpi1 libselinux1_3.1-2+b1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36.1-2 libsqlite3-0_3.34.0-1 libss2_1.45.6-1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.1-1+rpi1 libstdc++6_10.2.1-1+rpi1 libsub-override-perl_0.09-2 libsystemd0_246.6-4+rpi1 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libubsan1_10.2.1-1+rpi1 libuchardet0_0.0.7-1 libudev1_246.6-4+rpi1 libunistring2_0.9.10-4 libuuid1_2.36.1-2 libxml2_2.9.10+dfsg-6.3 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36.1-2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 netbase_6.2 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-6 pinentry-curses_1.1.0-4 po-debconf_1.0.21 raspbian-archive-keyring_20120528.2 readline-common_8.1-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-pilercr-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.32+dfsg-1+rpi1 tzdata_2020d-1 util-linux_2.36.1-2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.pQbVbR3P/trustedkeys.kbx': General error
gpgv: Signature made Wed Dec 16 15:55:59 2020 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./pilercr_1.06+dfsg-4.dsc
dpkg-source: info: extracting pilercr in /<<BUILDDIR>>/pilercr-1.06+dfsg
dpkg-source: info: unpacking pilercr_1.06+dfsg.orig.tar.xz
dpkg-source: info: unpacking pilercr_1.06+dfsg-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fix_unix_builds.patch
dpkg-source: info: applying no-static.patch
dpkg-source: info: applying debugsymbols.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-1c0fe5ab-14ca-4636-a117-297a3f2e98ae
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package pilercr
dpkg-buildpackage: info: source version 1.06+dfsg-4
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/pilercr-1.06+dfsg'
rm -f *.o pilercr pilercr.1
make[1]: Leaving directory '/<<BUILDDIR>>/pilercr-1.06+dfsg'
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/pilercr-1.06+dfsg'
dpkg-architecture -f -aarmhf -c dh_auto_build -- 'GPP=$(CXX)'
make -j4 "INSTALL=install --strip-program=true" GPP=\$\(CXX\)
make[2]: Entering directory '/<<BUILDDIR>>/pilercr-1.06+dfsg'
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c acceptaa.cpp -o acceptaa.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c accepthit.cpp -o accepthit.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c alignarrays.cpp -o alignarrays.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c alignclust.cpp -o alignclust.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c alignprofs.cpp -o alignprofs.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c aligntraps.cpp -o aligntraps.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c alnarray.cpp -o alnarray.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c alngivenpath.cpp -o alngivenpath.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c alpha.cpp -o alpha.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c assert.cpp -o assert.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c bittb.cpp -o bittb.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c clustcons.cpp -o clustcons.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c clustconsr.cpp -o clustconsr.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c cmp.cpp -o cmp.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c comp.cpp -o comp.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c cons.cpp -o cons.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c distcalc.cpp -o distcalc.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c distfunc.cpp -o distfunc.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c dp.cpp -o dp.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c estring.cpp -o estring.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c expandpiles.cpp -o expandpiles.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c filterb.cpp -o filterb.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c filterb2.cpp -o filterb2.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c findarrays.cpp -o findarrays.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c findpiles.cpp -o findpiles.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c fixbounds.cpp -o fixbounds.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c getarraydata.cpp -o getarraydata.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c getccs.cpp -o getccs.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c getconsaa.cpp -o getconsaa.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c getgdtree.cpp -o getgdtree.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c getparams.cpp -o getparams.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c getsubseq.cpp -o getsubseq.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c glbalign.cpp -o glbalign.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c hitstoimages.cpp -o hitstoimages.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c info.cpp -o info.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c kmerdist.cpp -o kmerdist.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c log.cpp -o log.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c logaa.cpp -o logaa.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c loghits.cpp -o loghits.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c main.cpp -o main.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c makecontigmap.cpp -o makecontigmap.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c makegraph.cpp -o makegraph.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c makeindex.cpp -o makeindex.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c mem.cpp -o mem.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c mergearrays.cpp -o mergearrays.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c mergefilterhits.cpp -o mergefilterhits.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c mkrootmsa.cpp -o mkrootmsa.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c msa.cpp -o msa.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c multaln.cpp -o multaln.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c options.cpp -o options.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c outarray.cpp -o outarray.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c outdetail.cpp -o outdetail.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c outdetailaa.cpp -o outdetailaa.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c outlocalaln.cpp -o outlocalaln.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c params.cpp -o params.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pilercr.cpp -o pilercr.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c proffrommsa.cpp -o proffrommsa.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c progaln.cpp -o progaln.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c progress.cpp -o progress.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c pwpath.cpp -o pwpath.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c quit.cpp -o quit.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c readfilterhits.cpp -o readfilterhits.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c readmfa.cpp -o readmfa.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c revcomp.cpp -o revcomp.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c savefhits.cpp -o savefhits.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c savefilterhit.cpp -o savefilterhit.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c saveseqs.cpp -o saveseqs.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c savetraps.cpp -o savetraps.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c scoremx.cpp -o scoremx.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c seq.cpp -o seq.o
savetraps.cpp: In function 'void SaveTrap(FILE*, const Trapezoid&)':
savetraps.cpp:14:69: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
14 | WriteGFFRecord(f, QueryFrom, QueryTo, TargetFrom, TargetTo, false, "trap", 0, 0);
| ^~~~~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c seqvect.cpp -o seqvect.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c swsimple.cpp -o swsimple.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c tbsw.cpp -o tbsw.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c tree.cpp -o tree.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c upgma.cpp -o upgma.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c usage.cpp -o usage.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c utils.cpp -o utils.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c utils_linux.cpp -o utils_linux.o
In file included from pilercr.h:38,
from utils.cpp:1:
utils.cpp: In function 'char* StdioStrMode(FILEIO_MODE)':
types.h:113:33: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
113 | #define FILIO_STRMODE_ReadOnly "r"
| ^~~
utils.cpp:62:10: note: in expansion of macro 'FILIO_STRMODE_ReadOnly'
62 | return FILIO_STRMODE_ReadOnly;
| ^~~~~~~~~~~~~~~~~~~~~~
types.h:114:34: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
114 | #define FILIO_STRMODE_WriteOnly "w"
| ^~~
utils.cpp:64:10: note: in expansion of macro 'FILIO_STRMODE_WriteOnly'
64 | return FILIO_STRMODE_WriteOnly;
| ^~~~~~~~~~~~~~~~~~~~~~~
types.h:115:34: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
115 | #define FILIO_STRMODE_ReadWrite "w+"
| ^~~~
utils.cpp:66:10: note: in expansion of macro 'FILIO_STRMODE_ReadWrite'
66 | return FILIO_STRMODE_ReadWrite;
| ^~~~~~~~~~~~~~~~~~~~~~~
utils.cpp:69:9: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
69 | return "r";
| ^~~
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c utils_other.cpp -o utils_other.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c utils_unix.cpp -o utils_unix.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c utils_win32.cpp -o utils_win32.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c validaa.cpp -o validaa.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c writearrays.cpp -o writearrays.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c writegff.cpp -o writegff.o
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c writepiles.cpp -o writepiles.o
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/pilercr-1.06+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o pilercr acceptaa.o accepthit.o alignarrays.o alignclust.o alignprofs.o aligntraps.o alnarray.o alngivenpath.o alpha.o assert.o bittb.o clustcons.o clustconsr.o cmp.o comp.o cons.o distcalc.o distfunc.o dp.o estring.o expandpiles.o filterb.o filterb2.o findarrays.o findpiles.o fixbounds.o getarraydata.o getccs.o getconsaa.o getgdtree.o getparams.o getsubseq.o glbalign.o hitstoimages.o info.o kmerdist.o log.o logaa.o loghits.o main.o makecontigmap.o makegraph.o makeindex.o mem.o mergearrays.o mergefilterhits.o mkrootmsa.o msa.o multaln.o options.o outarray.o outdetail.o outdetailaa.o outlocalaln.o params.o pilercr.o proffrommsa.o progaln.o progress.o pwpath.o quit.o readfilterhits.o readmfa.o revcomp.o savefhits.o savefilterhit.o saveseqs.o savetraps.o scoremx.o seq.o seqvect.o swsimple.o tbsw.o tree.o upgma.o usage.o utils.o utils_linux.o utils_other.o utils_unix.o utils_win32.o validaa.o writearrays.o writegff.o writepiles.o -lm
make[2]: Leaving directory '/<<BUILDDIR>>/pilercr-1.06+dfsg'
help2man ./pilercr \
--name 'software for finding CRISPR repeats' \
--help-option '-options' --no-discard-stderr \
--version-string 1.06+dfsg \
--no-info > pilercr.1
make[1]: Leaving directory '/<<BUILDDIR>>/pilercr-1.06+dfsg'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
dh_prep -a
dh_auto_install -a
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a -a
dh_strip -a -a
dh_makeshlibs -a -a
dh_shlibdeps -a -a
dpkg-shlibdeps: warning: debian/pilercr/usr/bin/pilercr contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/pilercr/usr/bin/pilercr was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'pilercr-dbgsym' in '../pilercr-dbgsym_1.06+dfsg-4_armhf.deb'.
dpkg-deb: building package 'pilercr' in '../pilercr_1.06+dfsg-4_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../pilercr_1.06+dfsg-4_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-12-22T10:19:02Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
pilercr_1.06+dfsg-4_armhf.changes:
----------------------------------
Format: 1.8
Date: Tue, 15 Dec 2020 15:37:19 +0100
Source: pilercr
Binary: pilercr pilercr-dbgsym
Architecture: armhf
Version: 1.06+dfsg-4
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Helmut Grohne <helmut@subdivi.de>
Description:
pilercr - software for finding CRISPR repeats
Closes: 977482
Changes:
pilercr (1.06+dfsg-4) unstable; urgency=medium
.
* Team upload.
* Fix FTCBFS: (Closes: #977482)
+ Pass C++ compiler as GPP variable.
+ Add native build pass for help2man.
Checksums-Sha1:
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06d385c074f915311a7ab28a8a14bc12392d3257 5014 pilercr_1.06+dfsg-4_armhf.buildinfo
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Checksums-Sha256:
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Files:
3c69932cc21d91742ed7e0f3966852e2 1106752 debug optional pilercr-dbgsym_1.06+dfsg-4_armhf.deb
fa8997ee481defbfe7a42c8325ee9369 5014 science optional pilercr_1.06+dfsg-4_armhf.buildinfo
12754abe7d7a10603caa8d618cd4ca67 86312 science optional pilercr_1.06+dfsg-4_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
pilercr-dbgsym_1.06+dfsg-4_armhf.deb
------------------------------------
new Debian package, version 2.0.
size 1106752 bytes: control archive=536 bytes.
379 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: pilercr-dbgsym
Source: pilercr
Version: 1.06+dfsg-4
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1133
Depends: pilercr (= 1.06+dfsg-4)
Section: debug
Priority: optional
Description: debug symbols for pilercr
Build-Ids: 6d73b77eaf7e09705e382cf5c8bad201dc1f4314
drwxr-xr-x root/root 0 2020-12-15 14:37 ./
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/lib/
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/lib/debug/.build-id/6d/
-rw-r--r-- root/root 1149440 2020-12-15 14:37 ./usr/lib/debug/.build-id/6d/73b77eaf7e09705e382cf5c8bad201dc1f4314.debug
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/share/
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-12-15 14:37 ./usr/share/doc/pilercr-dbgsym -> pilercr
pilercr_1.06+dfsg-4_armhf.deb
-----------------------------
new Debian package, version 2.0.
size 86312 bytes: control archive=772 bytes.
558 bytes, 13 lines control
258 bytes, 4 lines md5sums
Package: pilercr
Version: 1.06+dfsg-4
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 216
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.5), libstdc++6 (>= 5.2)
Section: science
Priority: optional
Homepage: https://www.drive5.com/pilercr/
Description: software for finding CRISPR repeats
CRISPR elements are short, highly conserved repeats in prokaryotic genomes
separated by unique sequences of similar length. PILERCR is designed for the
identification and analysis of CRISPR repeats.
drwxr-xr-x root/root 0 2020-12-15 14:37 ./
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/bin/
-rwxr-xr-x root/root 207132 2020-12-15 14:37 ./usr/bin/pilercr
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/share/
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/share/doc/pilercr/
-rw-r--r-- root/root 556 2020-12-15 14:37 ./usr/share/doc/pilercr/changelog.Debian.gz
-rw-r--r-- root/root 1465 2020-12-15 14:37 ./usr/share/doc/pilercr/copyright
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/share/man/
drwxr-xr-x root/root 0 2020-12-15 14:37 ./usr/share/man/man1/
-rw-r--r-- root/root 943 2020-12-15 14:37 ./usr/share/man/man1/pilercr.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 18364
Build-Time: 197
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 298
Job: pilercr_1.06+dfsg-4
Machine Architecture: armhf
Package: pilercr
Package-Time: 549
Source-Version: 1.06+dfsg-4
Space: 18364
Status: successful
Version: 1.06+dfsg-4
--------------------------------------------------------------------------------
Finished at 2020-12-22T10:19:02Z
Build needed 00:09:09, 18364k disc space