petsc →
3.2.dfsg-6+b1 →
armhf → 2013-11-28 22:50:25
sbuild (Debian sbuild) 0.63.2 (18 Aug 2012) on testbuildd.raspbian.org
╔══════════════════════════════════════════════════════════════════════════════╗
║ petsc 3.2.dfsg-6+b1 (armhf) 28 Nov 2013 22:41 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: petsc
Version: 3.2.dfsg-6+b1
Source Version: 3.2.dfsg-6
Distribution: jessie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/petsc-zdgFxN/petsc-3.2.dfsg' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/petsc-zdgFxN' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/jessie-staging-armhf-sbuild-29aa08a8-02d0-42d7-98bc-982121ebfbbf' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
Get:1 http://172.17.0.1 jessie-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1 jessie-staging/main Sources [7041 kB]
Get:3 http://172.17.0.1 jessie-staging/main armhf Packages [8171 kB]
Ign http://172.17.0.1 jessie-staging/main Translation-en
Fetched 15.2 MB in 33s (461 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files │
└──────────────────────────────────────────────────────────────────────────────┘
Check APT
─────────
Checking available source versions...
Download source files with APT
──────────────────────────────
Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'petsc' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-science/packages/petsc.git
Need to get 18.0 MB of source archives.
Get:1 http://172.17.0.1/private/ jessie-staging/main petsc 3.2.dfsg-6 (dsc) [2649 B]
Get:2 http://172.17.0.1/private/ jessie-staging/main petsc 3.2.dfsg-6 (tar) [17.9 MB]
Get:3 http://172.17.0.1/private/ jessie-staging/main petsc 3.2.dfsg-6 (diff) [33.5 kB]
Fetched 18.0 MB in 9s (1939 kB/s)
Download complete and in download only mode
Check arch
──────────
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-7OUKk3/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 10 not upgraded.
Need to get 0 B/706 B of archives.
After this operation, 0 B of additional disk space will be used.
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12159 files and directories currently installed.)
Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 5.0), quilt, python (>= 2.2), gfortran, automake, libx11-dev, mpi-default-dev, mpi-default-bin, libblas-dev | libblas-3gf.so, liblapack-dev | liblapack-3gf.so, libsuitesparse-dev (>= 3.1.0-2), libspooles-dev (>= 2.2-6), libhypre-dev (>= 2.4.0), libptscotch-dev, libhdf5-mpi-dev (>= 1.8.8), libblacs-mpi-dev, libscalapack-mpi-dev, libmumps-dev
Merged Build-Conflicts: cmake, lam4-dev, libatlas-base-dev, libatlas3gf-base
Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 5.0), quilt, python (>= 2.2), gfortran, automake, libx11-dev, mpi-default-dev, mpi-default-bin, libblas-dev, liblapack-dev, libsuitesparse-dev (>= 3.1.0-2), libspooles-dev (>= 2.2-6), libhypre-dev (>= 2.4.0), libptscotch-dev, libhdf5-mpi-dev (>= 1.8.8), libblacs-mpi-dev, libscalapack-mpi-dev, libmumps-dev
Filtered Build-Conflicts: cmake, lam4-dev, libatlas-base-dev, libatlas3gf-base
dpkg-deb: building package `sbuild-build-depends-petsc-dummy' in `/«BUILDDIR»/resolver-jeiiH_/apt_archive/sbuild-build-depends-petsc-dummy.deb'.
OK
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install petsc build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
adduser autoconf automake autotools-dev bsdmainutils debhelper diffstat file
gettext gettext-base gfortran gfortran-4.8 groff-base hdf5-helpers
intltool-debian libamd2.2.0 libasprintf0c2 libblacs-mpi-dev libblacs-mpi1
libblas-dev libblas3 libbtf1.1.0 libcamd2.2.0 libccolamd2.7.1
libcholmod1.7.1 libcolamd2.7.1 libcr0 libcroco3 libcsparse2.2.3
libcxsparse2.2.3 libexpat1 libffi6 libgfortran-4.8-dev libgfortran3
libglib2.0-0 libhdf5-mpi-dev libhdf5-openmpi-7 libhdf5-openmpi-dev
libhwloc-dev libhwloc5 libhypre-2.8.0b libhypre-dev libibverbs-dev
libibverbs1 libjpeg8 libjpeg8-dev libklu1.1.0 liblapack-dev liblapack3
libldl2.0.1 libltdl7 libmagic1 libmumps-4.10.0 libmumps-dev libopenmpi-dev
libopenmpi1.6 libpci-dev libpci3 libpipeline1 libpthread-stubs0-dev
libptscotch-5.1 libptscotch-dev libpython-stdlib libpython2.7-minimal
libpython2.7-stdlib libscalapack-mpi-dev libscalapack-mpi1 libscotch-5.1
libscotch-dev libsigsegv2 libspooles-dev libspooles2.2 libsqlite3-0
libssl1.0.0 libsuitesparse-dev libsuperlu3 libsuperlu3-dev libtorque2
libumfpack5.4.0 libunistring0 libx11-6 libx11-data libx11-dev libxau-dev
libxau6 libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 libxml2 libxml2-dev m4
man-db mime-support mpi-default-bin mpi-default-dev openmpi-bin
openmpi-common po-debconf python python-minimal python2.7 python2.7-minimal
quilt x11proto-core-dev x11proto-input-dev x11proto-kb-dev
xorg-sgml-doctools xtrans-dev zlib1g-dev
Suggested packages:
liblocale-gettext-perl autoconf2.13 autoconf-archive gnu-standards
autoconf-doc libtool wamerican wordlist whois vacation dh-make gettext-doc
gfortran-doc gfortran-4.8-doc libgfortran3-dbg groff blcr-dkms libhdf5-doc
libhwloc-contrib-plugins scalapack-doc spooles-doc libxcb-doc pkg-config
less www-browser openmpi-checkpoint libmail-box-perl python-doc python-tk
python2.7-doc binfmt-support procmail graphviz default-mta
mail-transport-agent
Recommended packages:
curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
libglib2.0-data shared-mime-info libhwloc-plugins libx11-doc xml-core
libmail-sendmail-perl
The following NEW packages will be installed:
adduser autoconf automake autotools-dev bsdmainutils debhelper diffstat file
gettext gettext-base gfortran gfortran-4.8 groff-base hdf5-helpers
intltool-debian libamd2.2.0 libasprintf0c2 libblacs-mpi-dev libblacs-mpi1
libblas-dev libblas3 libbtf1.1.0 libcamd2.2.0 libccolamd2.7.1
libcholmod1.7.1 libcolamd2.7.1 libcr0 libcroco3 libcsparse2.2.3
libcxsparse2.2.3 libexpat1 libffi6 libgfortran-4.8-dev libgfortran3
libglib2.0-0 libhdf5-mpi-dev libhdf5-openmpi-7 libhdf5-openmpi-dev
libhwloc-dev libhwloc5 libhypre-2.8.0b libhypre-dev libibverbs-dev
libibverbs1 libjpeg8 libjpeg8-dev libklu1.1.0 liblapack-dev liblapack3
libldl2.0.1 libltdl7 libmagic1 libmumps-4.10.0 libmumps-dev libopenmpi-dev
libopenmpi1.6 libpci-dev libpci3 libpipeline1 libpthread-stubs0-dev
libptscotch-5.1 libptscotch-dev libpython-stdlib libpython2.7-minimal
libpython2.7-stdlib libscalapack-mpi-dev libscalapack-mpi1 libscotch-5.1
libscotch-dev libsigsegv2 libspooles-dev libspooles2.2 libsqlite3-0
libssl1.0.0 libsuitesparse-dev libsuperlu3 libsuperlu3-dev libtorque2
libumfpack5.4.0 libunistring0 libx11-6 libx11-data libx11-dev libxau-dev
libxau6 libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6 libxml2 libxml2-dev m4
man-db mime-support mpi-default-bin mpi-default-dev openmpi-bin
openmpi-common po-debconf python python-minimal python2.7 python2.7-minimal
quilt sbuild-build-depends-petsc-dummy x11proto-core-dev x11proto-input-dev
x11proto-kb-dev xorg-sgml-doctools xtrans-dev zlib1g-dev
0 upgraded, 111 newly installed, 0 to remove and 10 not upgraded.
Need to get 73.2 MB/73.2 MB of archives.
After this operation, 200 MB of additional disk space will be used.
Get:1 http://172.17.0.1/private/ jessie-staging/main libpipeline1 armhf 1.2.4-1 [36.9 kB]
Get:2 http://172.17.0.1/private/ jessie-staging/main libssl1.0.0 armhf 1.0.1e-4 [1041 kB]
Get:3 http://172.17.0.1/private/ jessie-staging/main groff-base armhf 1.22.2-3 [666 kB]
Get:4 http://172.17.0.1/private/ jessie-staging/main bsdmainutils armhf 9.0.5 [206 kB]
Get:5 http://172.17.0.1/private/ jessie-staging/main man-db armhf 2.6.5-2 [949 kB]
Get:6 http://172.17.0.1/private/ jessie-staging/main libasprintf0c2 armhf 0.18.3.1-1 [29.4 kB]
Get:7 http://172.17.0.1/private/ jessie-staging/main libmagic1 armhf 1:5.14-2 [213 kB]
Get:8 http://172.17.0.1/private/ jessie-staging/main libpci3 armhf 1:3.2.0-3 [53.7 kB]
Get:9 http://172.17.0.1/private/ jessie-staging/main libsqlite3-0 armhf 3.8.1-1 [417 kB]
Get:10 http://172.17.0.1/private/ jessie-staging/main libxml2 armhf 2.9.1+dfsg1-3 [836 kB]
Get:11 http://172.17.0.1/private/ jessie-staging/main libpython2.7-minimal armhf 2.7.5-8+rvt [540 kB]
Get:12 http://172.17.0.1/private/ jessie-staging/main python2.7-minimal armhf 2.7.5-8+rvt [1492 kB]
Get:13 http://172.17.0.1/private/ jessie-staging/main libffi6 armhf 3.0.13-4 [19.8 kB]
Get:14 http://172.17.0.1/private/ jessie-staging/main libglib2.0-0 armhf 2.36.4-1 [1907 kB]
Get:15 http://172.17.0.1/private/ jessie-staging/main libcroco3 armhf 0.6.8-2 [119 kB]
Get:16 http://172.17.0.1/private/ jessie-staging/main libexpat1 armhf 2.1.0-4 [117 kB]
Get:17 http://172.17.0.1/private/ jessie-staging/main libgfortran3 armhf 4.8.2-1+rpi1 [226 kB]
Get:18 http://172.17.0.1/private/ jessie-staging/main libjpeg8 armhf 8d-1 [132 kB]
Get:19 http://172.17.0.1/private/ jessie-staging/main libltdl7 armhf 2.4.2-1.3 [349 kB]
Get:20 http://172.17.0.1/private/ jessie-staging/main libsigsegv2 armhf 2.10-2 [29.2 kB]
Get:21 http://172.17.0.1/private/ jessie-staging/main libunistring0 armhf 0.9.3-5 [408 kB]
Get:22 http://172.17.0.1/private/ jessie-staging/main libxau6 armhf 1:1.0.8-1 [19.9 kB]
Get:23 http://172.17.0.1/private/ jessie-staging/main libxdmcp6 armhf 1:1.1.1-1 [24.6 kB]
Get:24 http://172.17.0.1/private/ jessie-staging/main libxcb1 armhf 1.9.1-3 [43.3 kB]
Get:25 http://172.17.0.1/private/ jessie-staging/main libx11-data all 2:1.6.2-1 [125 kB]
Get:26 http://172.17.0.1/private/ jessie-staging/main libx11-6 armhf 2:1.6.2-1 [867 kB]
Get:27 http://172.17.0.1/private/ jessie-staging/main libhwloc5 armhf 1.7.2-1 [79.7 kB]
Get:28 http://172.17.0.1/private/ jessie-staging/main libcr0 armhf 0.8.5-2.1 [33.5 kB]
Get:29 http://172.17.0.1/private/ jessie-staging/main adduser all 3.113+nmu3 [264 kB]
Get:30 http://172.17.0.1/private/ jessie-staging/main libibverbs1 armhf 1.1.7-1 [31.0 kB]
Get:31 http://172.17.0.1/private/ jessie-staging/main libtorque2 armhf 2.4.16+dfsg-1.3 [108 kB]
Get:32 http://172.17.0.1/private/ jessie-staging/main libopenmpi1.6 armhf 1.6.5-5+rpi2 [2112 kB]
Get:33 http://172.17.0.1/private/ jessie-staging/main libhdf5-openmpi-7 armhf 1.8.11-5 [1525 kB]
Get:34 http://172.17.0.1/private/ jessie-staging/main libspooles2.2 armhf 2.2-10 [518 kB]
Get:35 http://172.17.0.1/private/ jessie-staging/main file armhf 1:5.14-2 [53.8 kB]
Get:36 http://172.17.0.1/private/ jessie-staging/main gettext-base armhf 0.18.3.1-1 [136 kB]
Get:37 http://172.17.0.1/private/ jessie-staging/main mime-support all 3.54 [36.4 kB]
Get:38 http://172.17.0.1/private/ jessie-staging/main libpython2.7-stdlib armhf 2.7.5-8+rvt [2477 kB]
Get:39 http://172.17.0.1/private/ jessie-staging/main m4 armhf 1.4.16-5 [245 kB]
Get:40 http://172.17.0.1/private/ jessie-staging/main python2.7 armhf 2.7.5-8+rvt [233 kB]
Get:41 http://172.17.0.1/private/ jessie-staging/main python-minimal armhf 2.7.5-5 [43.1 kB]
Get:42 http://172.17.0.1/private/ jessie-staging/main libpython-stdlib armhf 2.7.5-5 [19.8 kB]
Get:43 http://172.17.0.1/private/ jessie-staging/main python armhf 2.7.5-5 [180 kB]
Get:44 http://172.17.0.1/private/ jessie-staging/main autoconf all 2.69-2 [339 kB]
Get:45 http://172.17.0.1/private/ jessie-staging/main autotools-dev all 20130810.1 [69.6 kB]
Get:46 http://172.17.0.1/private/ jessie-staging/main automake all 1:1.14-3 [719 kB]
Get:47 http://172.17.0.1/private/ jessie-staging/main gettext armhf 0.18.3.1-1 [1837 kB]
Get:48 http://172.17.0.1/private/ jessie-staging/main intltool-debian all 0.35.0+20060710.1 [29.8 kB]
Get:49 http://172.17.0.1/private/ jessie-staging/main po-debconf all 1.0.16+nmu2 [223 kB]
Get:50 http://172.17.0.1/private/ jessie-staging/main debhelper all 9.20131110 [687 kB]
Get:51 http://172.17.0.1/private/ jessie-staging/main diffstat armhf 1.57-1 [30.4 kB]
Get:52 http://172.17.0.1/private/ jessie-staging/main libgfortran-4.8-dev armhf 4.8.2-1+rpi1 [300 kB]
Get:53 http://172.17.0.1/private/ jessie-staging/main gfortran-4.8 armhf 4.8.2-1+rpi1 [5704 kB]
Get:54 http://172.17.0.1/private/ jessie-staging/main gfortran armhf 4:4.8.1-3 [1134 B]
Get:55 http://172.17.0.1/private/ jessie-staging/main hdf5-helpers armhf 1.8.11-5 [32.6 kB]
Get:56 http://172.17.0.1/private/ jessie-staging/main libamd2.2.0 armhf 1:3.4.0-3 [21.5 kB]
Get:57 http://172.17.0.1/private/ jessie-staging/main libblas3 armhf 1.2.20110419-7 [186 kB]
Get:58 http://172.17.0.1/private/ jessie-staging/main libblas-dev armhf 1.2.20110419-7 [201 kB]
Get:59 http://172.17.0.1/private/ jessie-staging/main libbtf1.1.0 armhf 1:3.4.0-3 [11.0 kB]
Get:60 http://172.17.0.1/private/ jessie-staging/main libcamd2.2.0 armhf 1:3.4.0-3 [19.7 kB]
Get:61 http://172.17.0.1/private/ jessie-staging/main libccolamd2.7.1 armhf 1:3.4.0-3 [20.7 kB]
Get:62 http://172.17.0.1/private/ jessie-staging/main libcolamd2.7.1 armhf 1:3.4.0-3 [16.6 kB]
Get:63 http://172.17.0.1/private/ jessie-staging/main liblapack3 armhf 3.4.2+dfsg-4 [2288 kB]
Get:64 http://172.17.0.1/private/ jessie-staging/main libcholmod1.7.1 armhf 1:3.4.0-3 [369 kB]
Get:65 http://172.17.0.1/private/ jessie-staging/main libcsparse2.2.3 armhf 1:3.4.0-3 [30.1 kB]
Get:66 http://172.17.0.1/private/ jessie-staging/main libcxsparse2.2.3 armhf 1:3.4.0-3 [52.1 kB]
Get:67 http://172.17.0.1/private/ jessie-staging/main libjpeg8-dev armhf 8d-1 [238 kB]
Get:68 http://172.17.0.1/private/ jessie-staging/main libklu1.1.0 armhf 1:3.4.0-3 [83.3 kB]
Get:69 http://172.17.0.1/private/ jessie-staging/main liblapack-dev armhf 3.4.2+dfsg-4 [2564 kB]
Get:70 http://172.17.0.1/private/ jessie-staging/main libldl2.0.1 armhf 1:3.4.0-3 [10.9 kB]
Get:71 http://172.17.0.1/private/ jessie-staging/main zlib1g-dev armhf 1:1.2.8.dfsg-1 [212 kB]
Get:72 http://172.17.0.1/private/ jessie-staging/main libpci-dev armhf 1:3.2.0-3 [75.9 kB]
Get:73 http://172.17.0.1/private/ jessie-staging/main libpthread-stubs0-dev armhf 0.3-4 [4042 B]
Get:74 http://172.17.0.1/private/ jessie-staging/main libumfpack5.4.0 armhf 1:3.4.0-3 [307 kB]
Get:75 http://172.17.0.1/private/ jessie-staging/main libsuitesparse-dev armhf 1:3.4.0-3 [1295 kB]
Get:76 http://172.17.0.1/private/ jessie-staging/main libsuperlu3 armhf 3.0+20070106-3 [158 kB]
Get:77 http://172.17.0.1/private/ jessie-staging/main libsuperlu3-dev armhf 3.0+20070106-3 [541 kB]
Get:78 http://172.17.0.1/private/ jessie-staging/main xorg-sgml-doctools all 1:1.11-1 [21.9 kB]
Get:79 http://172.17.0.1/private/ jessie-staging/main x11proto-core-dev all 7.0.24-1 [779 kB]
Get:80 http://172.17.0.1/private/ jessie-staging/main libxau-dev armhf 1:1.0.8-1 [23.0 kB]
Get:81 http://172.17.0.1/private/ jessie-staging/main libxdmcp-dev armhf 1:1.1.1-1 [40.8 kB]
Get:82 http://172.17.0.1/private/ jessie-staging/main x11proto-input-dev all 2.3-1 [177 kB]
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Get:84 http://172.17.0.1/private/ jessie-staging/main xtrans-dev all 1.2.7-1 [112 kB]
Get:85 http://172.17.0.1/private/ jessie-staging/main libxcb1-dev armhf 1.9.1-3 [98.5 kB]
Get:86 http://172.17.0.1/private/ jessie-staging/main libx11-dev armhf 2:1.6.2-1 [991 kB]
Get:87 http://172.17.0.1/private/ jessie-staging/main libxml2-dev armhf 2.9.1+dfsg1-3 [837 kB]
Get:88 http://172.17.0.1/private/ jessie-staging/main quilt all 0.60-10 [343 kB]
Get:89 http://172.17.0.1/private/ jessie-staging/main openmpi-common all 1.6.5-5+rpi2 [123 kB]
Get:90 http://172.17.0.1/private/ jessie-staging/main openmpi-bin armhf 1.6.5-5+rpi2 [171 kB]
Get:91 http://172.17.0.1/private/ jessie-staging/main mpi-default-bin armhf 1.0.2 [3190 B]
Get:92 http://172.17.0.1/private/ jessie-staging/main libblacs-mpi1 armhf 1.1-31+b1 [51.5 kB]
Get:93 http://172.17.0.1/private/ jessie-staging/main libibverbs-dev armhf 1.1.7-1 [82.3 kB]
Get:94 http://172.17.0.1/private/ jessie-staging/main libhwloc-dev armhf 1.7.2-1 [144 kB]
Get:95 http://172.17.0.1/private/ jessie-staging/main libopenmpi-dev armhf 1.6.5-5+rpi2 [566 kB]
Get:96 http://172.17.0.1/private/ jessie-staging/main mpi-default-dev armhf 1.0.2 [3802 B]
Get:97 http://172.17.0.1/private/ jessie-staging/main libblacs-mpi-dev armhf 1.1-31+b1 [58.4 kB]
Get:98 http://172.17.0.1/private/ jessie-staging/main libhdf5-openmpi-dev armhf 1.8.11-5 [6465 kB]
Get:99 http://172.17.0.1/private/ jessie-staging/main libhdf5-mpi-dev armhf 1.8.11-5 [23.7 kB]
Get:100 http://172.17.0.1/private/ jessie-staging/main libhypre-2.8.0b armhf 2.8.0b-1+b1 [1569 kB]
Get:101 http://172.17.0.1/private/ jessie-staging/main libhypre-dev all 2.8.0b-1 [171 kB]
Get:102 http://172.17.0.1/private/ jessie-staging/main libscalapack-mpi1 armhf 1.8.0-9+b1 [2791 kB]
Get:103 http://172.17.0.1/private/ jessie-staging/main libmumps-4.10.0 armhf 4.10.0.dfsg-3+b1 [2388 kB]
Get:104 http://172.17.0.1/private/ jessie-staging/main libscalapack-mpi-dev armhf 1.8.0-9+b1 [2844 kB]
Get:105 http://172.17.0.1/private/ jessie-staging/main libmumps-dev armhf 4.10.0.dfsg-3+b1 [2572 kB]
Get:106 http://172.17.0.1/private/ jessie-staging/main libscotch-5.1 armhf 5.1.12b.dfsg-2+b1 [732 kB]
Get:107 http://172.17.0.1/private/ jessie-staging/main libptscotch-5.1 armhf 5.1.12b.dfsg-2+b1 [1187 kB]
Get:108 http://172.17.0.1/private/ jessie-staging/main libscotch-dev armhf 5.1.12b.dfsg-2+b1 [3436 kB]
Get:109 http://172.17.0.1/private/ jessie-staging/main libptscotch-dev armhf 5.1.12b.dfsg-2+b1 [5800 kB]
Get:110 http://172.17.0.1/private/ jessie-staging/main libspooles-dev armhf 2.2-10 [721 kB]
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Setting up libcamd2.2.0 (1:3.4.0-3) ...
Setting up libccolamd2.7.1 (1:3.4.0-3) ...
Setting up libcolamd2.7.1 (1:3.4.0-3) ...
Setting up liblapack3 (3.4.2+dfsg-4) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up libcholmod1.7.1 (1:3.4.0-3) ...
Setting up libcsparse2.2.3 (1:3.4.0-3) ...
Setting up libcxsparse2.2.3 (1:3.4.0-3) ...
Setting up libjpeg8-dev:armhf (8d-1) ...
Setting up libklu1.1.0 (1:3.4.0-3) ...
Setting up liblapack-dev (3.4.2+dfsg-4) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
Setting up libldl2.0.1 (1:3.4.0-3) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-1) ...
Setting up libpci-dev (1:3.2.0-3) ...
Setting up libpthread-stubs0-dev:armhf (0.3-4) ...
Setting up libumfpack5.4.0 (1:3.4.0-3) ...
Setting up libsuitesparse-dev (1:3.4.0-3) ...
Setting up libsuperlu3 (3.0+20070106-3) ...
Setting up libsuperlu3-dev (3.0+20070106-3) ...
Setting up xorg-sgml-doctools (1:1.11-1) ...
Setting up x11proto-core-dev (7.0.24-1) ...
Setting up libxau-dev:armhf (1:1.0.8-1) ...
Setting up libxdmcp-dev:armhf (1:1.1.1-1) ...
Setting up x11proto-input-dev (2.3-1) ...
Setting up x11proto-kb-dev (1.0.6-2) ...
Setting up xtrans-dev (1.2.7-1) ...
Setting up libxcb1-dev:armhf (1.9.1-3) ...
Setting up libx11-dev:armhf (2:1.6.2-1) ...
Setting up libxml2-dev:armhf (2.9.1+dfsg1-3) ...
Setting up quilt (0.60-10) ...
Setting up openmpi-common (1.6.5-5+rpi2) ...
Setting up openmpi-bin (1.6.5-5+rpi2) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
Setting up mpi-default-bin (1.0.2) ...
Setting up libblacs-mpi1 (1.1-31+b1) ...
Setting up libibverbs-dev (1.1.7-1) ...
Setting up libhwloc-dev:armhf (1.7.2-1) ...
Setting up libopenmpi-dev (1.6.5-5+rpi2) ...
update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode
Setting up mpi-default-dev (1.0.2) ...
Setting up libblacs-mpi-dev (1.1-31+b1) ...
Setting up libhdf5-openmpi-dev (1.8.11-5) ...
Setting up libhdf5-mpi-dev (1.8.11-5) ...
Setting up libhypre-2.8.0b (2.8.0b-1+b1) ...
Setting up libhypre-dev (2.8.0b-1) ...
Setting up libscalapack-mpi1 (1.8.0-9+b1) ...
Setting up libmumps-4.10.0 (4.10.0.dfsg-3+b1) ...
Setting up libscalapack-mpi-dev (1.8.0-9+b1) ...
Setting up libmumps-dev (4.10.0.dfsg-3+b1) ...
Setting up libscotch-5.1 (5.1.12b.dfsg-2+b1) ...
Setting up libptscotch-5.1 (5.1.12b.dfsg-2+b1) ...
Setting up libscotch-dev (5.1.12b.dfsg-2+b1) ...
Setting up libptscotch-dev (5.1.12b.dfsg-2+b1) ...
Setting up libspooles-dev:armhf (2.2-10) ...
Setting up sbuild-build-depends-petsc-dummy (0.invalid.0) ...
Processing triggers for libc-bin ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.11.0-armv7-x13 armhf (armv7l)
Toolchain package versions: binutils_2.23.90.20131017-1 dpkg-dev_1.16.12 g++-4.6_4.6.4-4+rpi1 g++-4.8_4.8.2-1+rpi1 gcc-4.6_4.6.4-4+rpi1 gcc-4.8_4.8.2-1+rpi1 libc6-dev_2.17-93 libstdc++-4.8-dev_4.8.2-1+rpi1 libstdc++6_4.8.2-1+rpi1 libstdc++6-4.6-dev_4.6.4-4+rpi1 linux-libc-dev_3.10.1-1+rpi1+b2
Package versions: adduser_3.113+nmu3 apt_0.9.12.1+rpi1 autoconf_2.69-2 automake_1:1.14-3 autotools-dev_20130810.1 base-files_7.2+rpi1 base-passwd_3.5.28 bash_4.2+dfsg-1 binutils_2.23.90.20131017-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.5 build-essential_11.6 bzip2_1.0.6-5 coreutils_8.21-1 cpio_2.11+dfsg-1 cpp_4:4.8.1-3 cpp-4.6_4.6.4-4+rpi1 cpp-4.8_4.8.2-1+rpi1 dash_0.5.7-3 debconf_1.5.51 debfoster_2.7-1.2 debhelper_9.20131110 debianutils_4.4 diffstat_1.57-1 diffutils_1:3.3-1 dpkg_1.16.12 dpkg-dev_1.16.12 e2fslibs_1.42.8-1 e2fsprogs_1.42.8-1 fakeroot_1.18.4-2 file_1:5.14-2 findutils_4.4.2-6 g++_4:4.8.1-3 g++-4.6_4.6.4-4+rpi1 g++-4.8_4.8.2-1+rpi1 gcc_4:4.8.1-3 gcc-4.5-base_4.5.3-12+rpi1 gcc-4.6_4.6.4-4+rpi1 gcc-4.6-base_4.6.4-4+rpi1 gcc-4.7-base_4.7.3-4+rpi1 gcc-4.8_4.8.2-1+rpi1 gcc-4.8-base_4.8.2-1+rpi1 gettext_0.18.3.1-1 gettext-base_0.18.3.1-1 gfortran_4:4.8.1-3 gfortran-4.8_4.8.2-1+rpi1 gnupg_1.4.15-1.1 gpgv_1.4.15-1.1 grep_2.14-4 groff-base_1.22.2-3 gzip_1.6-2 hdf5-helpers_1.8.11-5 hostname_3.14 initramfs-tools_0.114 initscripts_2.88dsf-43 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.1 klibc-utils_2.0.1-3.1+rpi1 kmod_9-3 libacl1_2.2.52-1 libamd2.2.0_1:3.4.0-3 libapt-pkg4.12_0.9.12.1+rpi1 libarchive-extract-perl_0.68-1 libasan0_4.8.2-1+rpi1 libasprintf0c2_0.18.3.1-1 libatomic1_4.8.2-1+rpi1 libattr1_1:2.4.47-1 libblacs-mpi-dev_1.1-31+b1 libblacs-mpi1_1.1-31+b1 libblas-dev_1.2.20110419-7 libblas3_1.2.20110419-7 libblkid1_2.20.1-5.5 libbtf1.1.0_1:3.4.0-3 libbz2-1.0_1.0.6-5 libc-bin_2.17-93 libc-dev-bin_2.17-93 libc6_2.17-93 libc6-dev_2.17-93 libcamd2.2.0_1:3.4.0-3 libcap2_1:2.22-1.2 libccolamd2.7.1_1:3.4.0-3 libcholmod1.7.1_1:3.4.0-3 libclass-isa-perl_0.36-5 libcloog-isl4_0.18.1-1 libcolamd2.7.1_1:3.4.0-3 libcomerr2_1.42.8-1 libcr0_0.8.5-2.1 libcroco3_0.6.8-2 libcsparse2.2.3_1:3.4.0-3 libcxsparse2.2.3_1:3.4.0-3 libdb5.1_5.1.29-6 libdbus-1-3_1.6.18-1 libdpkg-perl_1.16.12 libexpat1_2.1.0-4 libffi6_3.0.13-4 libgc1c2_1:7.2d-5 libgcc-4.8-dev_4.8.2-1+rpi1 libgcc1_1:4.8.2-1+rpi1 libgdbm3_1.8.3-12 libgfortran-4.8-dev_4.8.2-1+rpi1 libgfortran3_4.8.2-1+rpi1 libglib2.0-0_2.36.4-1 libgmp10_2:5.1.2+dfsg-3 libgomp1_4.8.2-1+rpi1 libhdf5-mpi-dev_1.8.11-5 libhdf5-openmpi-7_1.8.11-5 libhdf5-openmpi-dev_1.8.11-5 libhwloc-dev_1.7.2-1 libhwloc5_1.7.2-1 libhypre-2.8.0b_2.8.0b-1+b1 libhypre-dev_2.8.0b-1 libibverbs-dev_1.1.7-1 libibverbs1_1.1.7-1 libisl10_0.12.1-1 libjpeg8_8d-1 libjpeg8-dev_8d-1 libklibc_2.0.1-3.1+rpi1 libklu1.1.0_1:3.4.0-3 libkmod2_9-3 liblapack-dev_3.4.2+dfsg-4 liblapack3_3.4.2+dfsg-4 libldl2.0.1_1:3.4.0-3 liblog-message-simple-perl_0.10-1 libltdl7_2.4.2-1.3 liblzma5_5.1.1alpha+20120614-2 libmagic1_1:5.14-2 libmodule-pluggable-perl_4.8-1 libmount1_2.20.1-5.5 libmpc2_0.9-4 libmpc3_1.0.1-1 libmpfr4_3.1.2-1 libmumps-4.10.0_4.10.0.dfsg-3+b1 libmumps-dev_4.10.0.dfsg-3+b1 libncurses5_5.9+20130608-1 libncursesw5_5.9+20130608-1 libopenmpi-dev_1.6.5-5+rpi2 libopenmpi1.6_1.6.5-5+rpi2 libpam-modules_1.1.3-9 libpam-modules-bin_1.1.3-9 libpam-runtime_1.1.3-9 libpam0g_1.1.3-9 libpci-dev_1:3.2.0-3 libpci3_1:3.2.0-3 libpcre3_1:8.31-2 libpipeline1_1.2.4-1 libpod-latex-perl_0.61-1 libprocps0_1:3.3.4-2 libpthread-stubs0-dev_0.3-4 libptscotch-5.1_5.1.12b.dfsg-2+b1 libptscotch-dev_5.1.12b.dfsg-2+b1 libpython-stdlib_2.7.5-5 libpython2.7-minimal_2.7.5-8+rvt libpython2.7-stdlib_2.7.5-8+rvt libreadline6_6.2+dfsg-0.1 libscalapack-mpi-dev_1.8.0-9+b1 libscalapack-mpi1_1.8.0-9+b1 libscotch-5.1_5.1.12b.dfsg-2+b1 libscotch-dev_5.1.12b.dfsg-2+b1 libselinux1_2.1.13-3+rpi1 libsemanage-common_2.1.10-3+rpi1 libsemanage1_2.1.10-3+rpi1 libsepol1_2.1.9-2 libsigsegv2_2.10-2 libslang2_2.2.4-15 libspooles-dev_2.2-10 libspooles2.2_2.2-10 libsqlite3-0_3.8.1-1 libss2_1.42.8-1 libssl1.0.0_1.0.1e-4 libstdc++-4.8-dev_4.8.2-1+rpi1 libstdc++6_4.8.2-1+rpi1 libstdc++6-4.6-dev_4.6.4-4+rpi1 libsuitesparse-dev_1:3.4.0-3 libsuperlu3_3.0+20070106-3 libsuperlu3-dev_3.0+20070106-3 libswitch-perl_2.16-2 libterm-ui-perl_0.38-1 libtimedate-perl_1.2000-1 libtinfo5_5.9+20130608-1 libtorque2_2.4.16+dfsg-1.3 libudev0_175-7.2 libudev1_204-5 libumfpack5.4.0_1:3.4.0-3 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-23.2 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.5 libx11-6_2:1.6.2-1 libx11-data_2:1.6.2-1 libx11-dev_2:1.6.2-1 libxau-dev_1:1.0.8-1 libxau6_1:1.0.8-1 libxcb1_1.9.1-3 libxcb1-dev_1.9.1-3 libxdmcp-dev_1:1.1.1-1 libxdmcp6_1:1.1.1-1 libxml2_2.9.1+dfsg1-3 libxml2-dev_2.9.1+dfsg1-3 linux-libc-dev_3.10.1-1+rpi1+b2 login_1:4.1.5.1-1 lsb-base_4.1+Debian12+rpi1 m4_1.4.16-5 make_3.81-8.2 makedev_2.3.1-93 man-db_2.6.5-2 mawk_1.3.3-17 mime-support_3.54 mount_2.20.1-5.5 mpi-default-bin_1.0.2 mpi-default-dev_1.0.2 multiarch-support_2.17-93 ncurses-base_5.9+20130608-1 ncurses-bin_5.9+20130608-1 openmpi-bin_1.6.5-5+rpi2 openmpi-common_1.6.5-5+rpi2 passwd_1:4.1.5.1-1 patch_2.7.1-3 perl_5.18.1-4 perl-base_5.18.1-4 perl-modules_5.18.1-4 plymouth_0.8.8-6+deb8u3 po-debconf_1.0.16+nmu2 procps_1:3.3.4-2 python_2.7.5-5 python-minimal_2.7.5-5 python2.7_2.7.5-8+rvt python2.7-minimal_2.7.5-8+rvt quilt_0.60-10 raspbian-archive-keyring_20120528.2 readline-common_6.2+dfsg-0.1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-petsc-dummy_0.invalid.0 sed_4.2.2-2 sensible-utils_0.0.9 sysv-rc_2.88dsf-43 sysvinit_2.88dsf-43 sysvinit-utils_2.88dsf-43 tar_1.26+dfsg-8 tzdata_2013d-1 udev_204-5 util-linux_2.20.1-5.5 x11proto-core-dev_7.0.24-1 x11proto-input-dev_2.3-1 x11proto-kb-dev_1.0.6-2 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.2.7-1 xz-utils_5.1.1alpha+20120614-2 zlib1g_1:1.2.8.dfsg-1 zlib1g-dev_1:1.2.8.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Sun Nov 11 15:49:08 2012 UTC using RSA key ID 0ECEBE4A
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./petsc_3.2.dfsg-6.dsc
dpkg-source: info: extracting petsc in petsc-3.2.dfsg
dpkg-source: info: unpacking petsc_3.2.dfsg.orig.tar.gz
dpkg-source: info: unpacking petsc_3.2.dfsg-6.debian.tar.gz
dpkg-source: info: applying build-debug-nowarn.patch
dpkg-source: info: applying build-no-rpath.patch
dpkg-source: info: applying docs.patch
dpkg-source: info: applying example-src-dir.patch
dpkg-source: info: applying lib-versions.patch
dpkg-source: info: applying sprng-2.patch
dpkg-source: info: applying clean-no-double-colon.patch
dpkg-source: info: applying mumps.patch
dpkg-source: info: applying hypre.patch
dpkg-source: info: applying nocleanup.patch
dpkg-source: info: applying umfpack.patch
Check disc space
────────────────
Sufficient free space for build
Hack binNMU version
───────────────────
Created changelog entry for binNMU version 3.2.dfsg-6+b1
User Environment
────────────────
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=en_US.UTF-8
LC_ALL=POSIX
LOGNAME=root
LS_OPTIONS=--color=auto
MAIL=/var/mail/root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/root
SCHROOT_ALIAS_NAME=jessie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=jessie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=jessie-staging-armhf-sbuild-29aa08a8-02d0-42d7-98bc-982121ebfbbf
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
SHLVL=1
SSH_CLIENT=192.168.1.2 45410 22
SSH_CONNECTION=192.168.1.2 45410 192.168.1.45 22
SSH_TTY=/dev/pts/0
TERM=xterm
USER=root
XDG_SESSION_COOKIE=106ef489ba27ee071ab233f6518d3bce-1380046912.711892-759150774
_=/etc/init.d/buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package petsc
dpkg-buildpackage: source version 3.2.dfsg-6+b1
dpkg-source --before-build petsc-3.2.dfsg
dpkg-buildpackage: host architecture armhf
dpkg-source: warning: unknown information field 'Dm-Upload-Allowed' in input data in general section of control info file
fakeroot debian/rules clean
dh_testdir
if [ -f TAGS.backup ]; then mv -f TAGS.backup TAGS; fi
dh_quilt_unpatch
Removing patch umfpack.patch
Restoring src/mat/impls/aij/seq/umfpack/umfpack.c
Removing patch nocleanup.patch
Restoring config/BuildSystem/config/framework.py
Removing patch hypre.patch
Restoring config/PETSc/packages/hypre.py
Removing patch mumps.patch
Restoring config/PETSc/packages/MUMPS.py
Removing patch clean-no-double-colon.patch
Restoring conf/rules
Removing patch sprng-2.patch
Restoring config/PETSc/packages/sprng.py
Restoring src/sys/random/impls/sprng/sprng.c
Removing patch lib-versions.patch
Restoring conf/rules
Removing patch example-src-dir.patch
Restoring src/mat/examples/tests/ex110.c
Restoring src/mat/examples/tutorials/ex4.c
Restoring src/mat/examples/tutorials/ex5.c
Removing patch docs.patch
Restoring docs/bugreporting.html
Restoring docs/index.html
Restoring docs/faq.html
Removing patch build-no-rpath.patch
Restoring config/BuildSystem/config/setCompilers.py
Removing patch build-debug-nowarn.patch
Restoring config/PETSc/utilities/debugging.py
No patches applied
dh_clean -XTAGS
rm -rf debian/libpetsc3.2 debian/libpetsc3.2-dev \
debian/libpetsc3.2-dbg
rm -f build* install* debian/*.substvars debian/extemp debian/libpetsc3.2-dev.docs debian/libpetsc3.2-dev.postinst debian/libpetsc3.2-dev.prerm
rm -f RDict.log RDict.db configure.log.bkp debian/control.in make.log \
confdefs.h conffix.h conftest.c lib1.so lib2.so CMakeLists.txt
rm -f config/BuildSystem/config/packages/config.* conf/petscvariables
rm -f `find . -name \*.o -print` `find . -name \*.pyc -print`
rm -rf lib linux-gnueabihf-c-debug linux-gnueabihf-c-opt configure.log
debian/rules build-arch
dh_quilt_patch
Applying patch build-debug-nowarn.patch
patching file config/PETSc/utilities/debugging.py
Applying patch build-no-rpath.patch
patching file config/BuildSystem/config/setCompilers.py
Applying patch docs.patch
patching file docs/bugreporting.html
patching file docs/index.html
patching file docs/faq.html
Applying patch example-src-dir.patch
patching file src/mat/examples/tests/ex110.c
patching file src/mat/examples/tutorials/ex4.c
patching file src/mat/examples/tutorials/ex5.c
Applying patch lib-versions.patch
patching file conf/rules
Applying patch sprng-2.patch
patching file config/PETSc/packages/sprng.py
patching file src/sys/random/impls/sprng/sprng.c
Applying patch clean-no-double-colon.patch
patching file conf/rules
Applying patch mumps.patch
patching file config/PETSc/packages/MUMPS.py
Applying patch hypre.patch
patching file config/PETSc/packages/hypre.py
Applying patch nocleanup.patch
patching file config/BuildSystem/config/framework.py
Applying patch umfpack.patch
patching file src/mat/impls/aij/seq/umfpack/umfpack.c
Now at patch umfpack.patch
echo Using MPI implementation openmpi in directory /usr/lib/openmpi
Using MPI implementation openmpi in directory /usr/lib/openmpi
cp -fp /usr/share/automake-1.11/config.* config/BuildSystem/config/packages/
cp: cannot stat '/usr/share/automake-1.11/config.*': No such file or directory
make: *** [build-arch] Error 1
dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2
────────────────────────────────────────────────────────────────────────────────
Build finished at 20131128-2251
Finished
────────
E: Build failure (dpkg-buildpackage died)
┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 123588
Build-Time: 15
Distribution: jessie-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 505
Job: petsc_3.2.dfsg-6
Machine Architecture: armhf
Package: petsc
Package-Time: 592
Source-Version: 3.2.dfsg-6
Space: 123588
Status: attempted
Version: 3.2.dfsg-6+b1
────────────────────────────────────────────────────────────────────────────────
Finished at 20131128-2251
Build needed 00:09:52, 123588k disc space