Raspbian Package Auto-Building

pbbam → 0.1.0~20150813+git4e9e417+dfsg-1 → armhf → 2016-02-01 02:27:04

sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on testbuildd.raspbian.org

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║ pbbam 0.1.0~20150813+git4e9e417+dfsg-1 (armhf)             01 Feb 2016 02:07 ║
╚══════════════════════════════════════════════════════════════════════════════╝

Package: pbbam
Version: 0.1.0~20150813+git4e9e417+dfsg-1
Source Version: 0.1.0~20150813+git4e9e417+dfsg-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'build/pbbam-k1hNws/pbbam-0.1.0~20150813+git4e9e417+dfsg' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/pbbam-k1hNws' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-416cb53b-aaca-4905-b9cb-a5d0935e6192' with '«CHROOT»'

┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot                                                                │
└──────────────────────────────────────────────────────────────────────────────┘

Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8652 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [10.7 MB]
Fetched 19.4 MB in 23s (826 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files                                                           │
└──────────────────────────────────────────────────────────────────────────────┘


Check APT
─────────

Checking available source versions...

Download source files with APT
──────────────────────────────

Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'pbbam' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debian-med/pbbam.git
Please use:
git clone git://anonscm.debian.org/debian-med/pbbam.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1428 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main pbbam 0.1.0~20150813+git4e9e417+dfsg-1 (dsc) [2208 B]
Get:2 http://172.17.0.1/private stretch-staging/main pbbam 0.1.0~20150813+git4e9e417+dfsg-1 (tar) [1420 kB]
Get:3 http://172.17.0.1/private stretch-staging/main pbbam 0.1.0~20150813+git4e9e417+dfsg-1 (diff) [5932 B]
Fetched 1428 kB in 0s (2360 kB/s)
Download complete and in download only mode

Check architectures
───────────────────


Check dependencies
──────────────────

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/«BUILDDIR»/resolver-EHpYt9/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-EHpYt9/apt_archive ./ InRelease
Ign:1 file:/«BUILDDIR»/resolver-EHpYt9/apt_archive ./ InRelease
Get:2 file:/«BUILDDIR»/resolver-EHpYt9/apt_archive ./ Release [2119 B]
Get:2 file:/«BUILDDIR»/resolver-EHpYt9/apt_archive ./ Release [2119 B]
Get:3 file:/«BUILDDIR»/resolver-EHpYt9/apt_archive ./ Release.gpg [299 B]
Get:3 file:/«BUILDDIR»/resolver-EHpYt9/apt_archive ./ Release.gpg [299 B]
Get:4 file:/«BUILDDIR»/resolver-EHpYt9/apt_archive ./ Sources [208 B]
Get:5 file:/«BUILDDIR»/resolver-EHpYt9/apt_archive ./ Packages [527 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver)                         │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 36 not upgraded.
Need to get 0 B/768 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 file:/«BUILDDIR»/resolver-EHpYt9/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [768 B]
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package sbuild-build-depends-core-dummy.
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Preparing to unpack .../sbuild-build-depends-core-dummy.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), cmake, doxygen, libboost-dev (>= 1.54), zlib1g-dev, libssl-dev, libhts-dev, samtools
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), cmake, doxygen, libboost-dev (>= 1.54), zlib1g-dev, libssl-dev, libhts-dev, samtools
dpkg-deb: building package 'sbuild-build-depends-pbbam-dummy' in '/«BUILDDIR»/resolver-RcNoZ0/apt_archive/sbuild-build-depends-pbbam-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-RcNoZ0/apt_archive ./ InRelease
Ign:1 file:/«BUILDDIR»/resolver-RcNoZ0/apt_archive ./ InRelease
Get:2 file:/«BUILDDIR»/resolver-RcNoZ0/apt_archive ./ Release [2119 B]
Get:2 file:/«BUILDDIR»/resolver-RcNoZ0/apt_archive ./ Release [2119 B]
Get:3 file:/«BUILDDIR»/resolver-RcNoZ0/apt_archive ./ Release.gpg [299 B]
Get:3 file:/«BUILDDIR»/resolver-RcNoZ0/apt_archive ./ Release.gpg [299 B]
Get:4 file:/«BUILDDIR»/resolver-RcNoZ0/apt_archive ./ Sources [348 B]
Get:5 file:/«BUILDDIR»/resolver-RcNoZ0/apt_archive ./ Packages [605 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

┌──────────────────────────────────────────────────────────────────────────────┐
│ Install pbbam build dependencies (apt-based resolver)                        │
└──────────────────────────────────────────────────────────────────────────────┘

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autotools-dev bsdmainutils cmake cmake-data cpp-5 debhelper
  dh-strip-nondeterminism doxygen file g++-5 gcc-5 gcc-5-base gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13
  libasan2 libatomic1 libboost-dev libboost1.58-dev libbsd0 libcc1-0
  libclang1-3.5 libcroco3 libcurl3 libedit2 libexpat1 libffi6
  libfile-stripnondeterminism-perl libgcc-5-dev libgcc1 libglib2.0-0
  libgnutls30 libgomp1 libgssapi-krb5-2 libhogweed4 libhts-dev libhts1
  libicu55 libidn11 libjsoncpp0v5 libk5crypto3 libkeyutils1 libkrb5-3
  libkrb5support0 libldap-2.4-2 libllvm3.5v5 liblzo2-2 libmagic1 libnettle6
  libnghttp2-14 libobjc-5-dev libobjc4 libp11-kit0 libpipeline1 librtmp1
  libsasl2-2 libsasl2-modules-db libssh2-1 libssl-dev libssl1.0.2
  libstdc++-5-dev libstdc++6 libtasn1-6 libtimedate-perl libubsan0
  libunistring0 libxapian22v5 libxml2 man-db po-debconf samtools zlib1g-dev
Suggested packages:
  wamerican | wordlist whois vacation codeblocks eclipse ninja-build
  gcc-5-locales dh-make doxygen-latex doxygen-doc doxygen-gui graphviz
  gcc-5-doc libstdc++6-5-dbg libgcc1-dbg libgomp1-dbg libitm1-dbg
  libatomic1-dbg libasan2-dbg liblsan0-dbg libtsan0-dbg libubsan0-dbg
  libcilkrts5-dbg libmpx0-dbg libquadmath0-dbg gettext-doc autopoint
  libasprintf-dev libgettextpo-dev groff lrzip libboost-doc libboost1.58-doc
  libboost-atomic1.58-dev libboost-chrono1.58-dev libboost-context1.58-dev
  libboost-coroutine1.58-dev libboost-date-time1.58-dev
  libboost-exception1.58-dev libboost-filesystem1.58-dev
  libboost-graph1.58-dev libboost-graph-parallel1.58-dev
  libboost-iostreams1.58-dev libboost-locale1.58-dev libboost-log1.58-dev
  libboost-math1.58-dev libboost-mpi1.58-dev libboost-mpi-python1.58-dev
  libboost-program-options1.58-dev libboost-python1.58-dev
  libboost-random1.58-dev libboost-regex1.58-dev
  libboost-serialization1.58-dev libboost-signals1.58-dev
  libboost-system1.58-dev libboost-test1.58-dev libboost-thread1.58-dev
  libboost-timer1.58-dev libboost-wave1.58-dev libboost1.58-tools-dev
  libmpfrc++-dev libntl-dev gnutls-bin krb5-doc krb5-user libstdc++-5-doc
  xapian-tools less www-browser libmail-box-perl
Recommended packages:
  curl | wget | lynx-cur ca-certificates libglib2.0-data shared-mime-info
  xdg-user-dirs krb5-locales libsasl2-modules libssl-doc xml-core
  libmail-sendmail-perl python
The following NEW packages will be installed:
  autotools-dev bsdmainutils cmake cmake-data debhelper
  dh-strip-nondeterminism doxygen file gettext gettext-base groff-base
  intltool-debian libarchive-zip-perl libarchive13 libboost-dev
  libboost1.58-dev libbsd0 libclang1-3.5 libcroco3 libcurl3 libedit2 libexpat1
  libffi6 libfile-stripnondeterminism-perl libglib2.0-0 libgnutls30
  libgssapi-krb5-2 libhogweed4 libhts-dev libhts1 libicu55 libidn11
  libjsoncpp0v5 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
  libldap-2.4-2 libllvm3.5v5 liblzo2-2 libmagic1 libnettle6 libnghttp2-14
  libobjc-5-dev libobjc4 libp11-kit0 libpipeline1 librtmp1 libsasl2-2
  libsasl2-modules-db libssh2-1 libssl-dev libssl1.0.2 libtasn1-6
  libtimedate-perl libunistring0 libxapian22v5 libxml2 man-db po-debconf
  samtools sbuild-build-depends-pbbam-dummy zlib1g-dev
The following packages will be upgraded:
  cpp-5 g++-5 gcc-5 gcc-5-base libasan2 libatomic1 libcc1-0 libgcc-5-dev
  libgcc1 libgomp1 libstdc++-5-dev libstdc++6 libubsan0
13 upgraded, 63 newly installed, 0 to remove and 23 not upgraded.
Need to get 119 MB/119 MB of archives.
After this operation, 250 MB of additional disk space will be used.
Get:1 file:/«BUILDDIR»/resolver-RcNoZ0/apt_archive ./ sbuild-build-depends-pbbam-dummy 0.invalid.0 [850 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf libgomp1 armhf 5.3.1-7+rpi1 [47.3 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf libatomic1 armhf 5.3.1-7+rpi1 [6566 B]
Get:4 http://172.17.0.1/private stretch-staging/main armhf gcc-5-base armhf 5.3.1-7+rpi1 [169 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf libgcc1 armhf 1:5.3.1-7+rpi1 [38.5 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf libasan2 armhf 5.3.1-7+rpi1 [227 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf libubsan0 armhf 5.3.1-7+rpi1 [84.2 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf cpp-5 armhf 5.3.1-7+rpi1 [22.9 MB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf libcc1-0 armhf 5.3.1-7+rpi1 [24.8 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf g++-5 armhf 5.3.1-7+rpi1 [24.5 MB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf gcc-5 armhf 5.3.1-7+rpi1 [22.9 MB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf libgcc-5-dev armhf 5.3.1-7+rpi1 [452 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libstdc++-5-dev armhf 5.3.1-7+rpi1 [1429 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf libstdc++6 armhf 5.3.1-7+rpi1 [328 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-5 [1083 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.6 [177 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libbsd0 armhf 0.8.1-1 [86.8 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf libedit2 armhf 3.1-20150325-1 [70.7 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf cmake-data all 3.4.1-2 [1110 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf liblzo2-2 armhf 2.08-1.2 [47.6 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf libnettle6 armhf 3.1.1-4 [200 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf libicu55 armhf 55.1-7 [7380 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.3+dfsg1-1 [800 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf libarchive13 armhf 3.1.2-11+b1 [230 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf libkeyutils1 armhf 1.5.9-8 [11.5 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf libkrb5support0 armhf 1.13.2+dfsg-4+b1 [56.5 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf libk5crypto3 armhf 1.13.2+dfsg-4+b1 [110 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf libkrb5-3 armhf 1.13.2+dfsg-4+b1 [261 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf libgssapi-krb5-2 armhf 1.13.2+dfsg-4+b1 [129 kB]
Get:32 http://172.17.0.1/private stretch-staging/main armhf libidn11 armhf 1.32-3 [110 kB]
Get:33 http://172.17.0.1/private stretch-staging/main armhf libhogweed4 armhf 3.1.1-4 [126 kB]
Get:34 http://172.17.0.1/private stretch-staging/main armhf libffi6 armhf 3.2.1-4 [18.5 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf libp11-kit0 armhf 0.23.2-3 [93.3 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf libtasn1-6 armhf 4.7-3 [44.4 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf libgnutls30 armhf 3.4.8-2 [710 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf libsasl2-modules-db armhf 2.1.26.dfsg1-14+b1 [65.8 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf libsasl2-2 armhf 2.1.26.dfsg1-14+b1 [97.1 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf libldap-2.4-2 armhf 2.4.42+dfsg-2+rpi1+b2 [198 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf libnghttp2-14 armhf 1.6.0-1 [68.2 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d-1+b1 [54.4 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf libssh2-1 armhf 1.5.0-2 [122 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf libssl1.0.2 armhf 1.0.2f-2 [883 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf libcurl3 armhf 7.47.0-1 [247 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf libexpat1 armhf 2.1.0-7 [59.8 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf libjsoncpp0v5 armhf 0.10.5-1 [66.2 kB]
Get:48 http://172.17.0.1/private stretch-staging/main armhf cmake armhf 3.4.1-2 [2182 kB]
Get:49 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf libxapian22v5 armhf 1.2.22-1 [866 kB]
Get:51 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.25-2 [250 kB]
Get:52 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.25-2 [61.2 kB]
Get:53 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.7-2 [111 kB]
Get:54 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20150820.1 [71.7 kB]
Get:55 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.46.2-3 [2482 kB]
Get:56 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:57 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.7-2 [1400 kB]
Get:58 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:59 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.19 [249 kB]
Get:60 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.56-2 [94.9 kB]
Get:61 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.014-1 [10.6 kB]
Get:62 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:63 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.014-1 [7472 B]
Get:64 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20160115 [827 kB]
Get:65 http://172.17.0.1/private stretch-staging/main armhf libllvm3.5v5 armhf 1:3.5.2-3 [6503 kB]
Get:66 http://172.17.0.1/private stretch-staging/main armhf libobjc4 armhf 5.3.1-7+rpi1 [90.2 kB]
Get:67 http://172.17.0.1/private stretch-staging/main armhf libobjc-5-dev armhf 5.3.1-7+rpi1 [335 kB]
Get:68 http://172.17.0.1/private stretch-staging/main armhf libclang1-3.5 armhf 1:3.5.2-3 [2822 kB]
Get:69 http://172.17.0.1/private stretch-staging/main armhf doxygen armhf 1.8.9.1-6 [2582 kB]
Get:70 http://172.17.0.1/private stretch-staging/main armhf libboost1.58-dev armhf 1.58.0+dfsg-4.1 [6234 kB]
Get:71 http://172.17.0.1/private stretch-staging/main armhf libboost-dev armhf 1.58.0.1 [3472 B]
Get:72 http://172.17.0.1/private stretch-staging/main armhf libhts1 armhf 1.2.1-2+rpi1 [191 kB]
Get:73 http://172.17.0.1/private stretch-staging/main armhf libhts-dev armhf 1.2.1-2+rpi1 [238 kB]
Get:74 http://172.17.0.1/private stretch-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-2+b1 [197 kB]
Get:75 http://172.17.0.1/private stretch-staging/main armhf libssl-dev armhf 1.0.2f-2 [1142 kB]
Get:76 http://172.17.0.1/private stretch-staging/main armhf samtools armhf 1.2-4 [333 kB]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment                                                            │
└──────────────────────────────────────────────────────────────────────────────┘

Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.25.90.20160101-2 dpkg-dev_1.18.4 g++-5_5.3.1-7+rpi1 gcc-5_5.3.1-7+rpi1 libc6-dev_2.21-6 libstdc++-5-dev_5.3.1-7+rpi1 libstdc++6_5.3.1-7+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.113+nmu3 apt_1.2 autotools-dev_20150820.1 base-files_9.5+rpi1 base-passwd_3.5.39 bash_4.3-14 binutils_2.25.90.20160101-2 bsdmainutils_9.0.6 bsdutils_1:2.27.1-1 build-essential_11.7 bzip2_1.0.6-8 cmake_3.4.1-2 cmake-data_3.4.1-2 coreutils_8.23-4 cpio_2.11+dfsg-4.1 cpp_4:5.3.1-1+rpi1 cpp-5_5.3.1-7+rpi1 dash_0.5.7-4 debconf_1.5.58 debfoster_2.7-2 debhelper_9.20160115 debianutils_4.5.1 dh-strip-nondeterminism_0.014-1 diffutils_1:3.3-3 dmsetup_2:1.02.114-1 doxygen_1.8.9.1-6 dpkg_1.18.4 dpkg-dev_1.18.4 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.6.0-2 g++_4:5.3.1-1+rpi1 g++-5_5.3.1-7+rpi1 gcc_4:5.3.1-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-3 gcc-4.9-base_4.9.3-10 gcc-5_5.3.1-7+rpi1 gcc-5-base_5.3.1-7+rpi1 gettext_0.19.7-2 gettext-base_0.19.7-2 gnupg_1.4.20-1 gpgv_1.4.20-1 grep_2.22-1 groff-base_1.22.3-5 gzip_1.6-4 hostname_3.16 init_1.24 init-system-helpers_1.24 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-6+rpi1 kmod_21-1 libacl1_2.2.52-2 libapparmor1_2.10-2+b3 libapt-pkg5.0_1.2 libarchive-zip-perl_1.56-2 libarchive13_3.1.2-11+b1 libasan2_5.3.1-7+rpi1 libatomic1_5.3.1-7+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.5-1 libaudit1_1:2.4.5-1 libblkid1_2.27.1-1 libboost-dev_1.58.0.1 libboost1.58-dev_1.58.0+dfsg-4.1 libbsd0_0.8.1-1 libbz2-1.0_1.0.6-8 libc-bin_2.21-6 libc-dev-bin_2.21-6 libc6_2.21-6 libc6-dev_2.21-6 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.3.1-7+rpi1 libclang1-3.5_1:3.5.2-3 libcomerr2_1.42.13-1 libcroco3_0.6.11-1 libcryptsetup4_2:1.7.0-2 libcurl3_7.47.0-1 libdb5.3_5.3.28-11 libdbus-1-3_1.10.6-1 libdebconfclient0_0.201 libdevmapper1.02.1_2:1.02.114-1 libdpkg-perl_1.18.4 libdrm2_2.4.66-2 libedit2_3.1-20150325-1 libexpat1_2.1.0-7 libfakeroot_1.20.2-1 libfdisk1_2.27.1-1 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.014-1 libgc1c2_1:7.4.2-7.3 libgcc-5-dev_5.3.1-7+rpi1 libgcc1_1:5.3.1-7+rpi1 libgcrypt20_1.6.4-4 libgdbm3_1.8.3-13.1 libglib2.0-0_2.46.2-3 libgmp10_2:6.1.0+dfsg-2 libgnutls30_3.4.8-2 libgomp1_5.3.1-7+rpi1 libgpg-error0_1.21-1 libgssapi-krb5-2_1.13.2+dfsg-4+b1 libhogweed4_3.1.1-4 libhts-dev_1.2.1-2+rpi1 libhts1_1.2.1-2+rpi1 libicu55_55.1-7 libidn11_1.32-3 libisl15_0.15-3 libjsoncpp0v5_0.10.5-1 libk5crypto3_1.13.2+dfsg-4+b1 libkeyutils1_1.5.9-8 libklibc_2.0.4-6+rpi1 libkmod2_21-1 libkrb5-3_1.13.2+dfsg-4+b1 libkrb5support0_1.13.2+dfsg-4+b1 libldap-2.4-2_2.4.42+dfsg-2+rpi1+b2 libllvm3.5v5_1:3.5.2-3 liblz4-1_0.0~r131-1 liblzma5_5.1.1alpha+20120614-2.1 liblzo2-2_2.08-1.2 libmagic1_1:5.25-2 libmount1_2.27.1-1 libmpc3_1.0.3-1 libmpfr4_3.1.3-2 libncurses5_6.0+20151024-2 libncursesw5_6.0+20151024-2 libnettle6_3.1.1-4 libnghttp2-14_1.6.0-1 libobjc-5-dev_5.3.1-7+rpi1 libobjc4_5.3.1-7+rpi1 libp11-kit0_0.23.2-3 libpam-modules_1.1.8-3.2 libpam-modules-bin_1.1.8-3.2 libpam-runtime_1.1.8-3.2 libpam0g_1.1.8-3.2 libpcre3_2:8.38-1 libperl5.22_5.22.1-4 libpipeline1_1.4.1-2 libpng12-0_1.2.54-1 libprocps5_2:3.3.11-3 libreadline6_6.3-8+b3 librtmp1_2.4+20151223.gitfa8646d-1+b1 libsasl2-2_2.1.26.dfsg1-14+b1 libsasl2-modules-db_2.1.26.dfsg1-14+b1 libseccomp2_2.2.3-2 libselinux1_2.4-3 libsemanage-common_2.4-3 libsemanage1_2.4-3 libsepol1_2.4-2 libsmartcols1_2.27.1-1 libss2_1.42.13-1 libssh2-1_1.5.0-2 libssl-dev_1.0.2f-2 libssl1.0.2_1.0.2f-2 libstdc++-5-dev_5.3.1-7+rpi1 libstdc++6_5.3.1-7+rpi1 libsystemd0_228-4 libtasn1-6_4.7-3 libtext-charwidth-perl_0.04-7+b6 libtext-iconv-perl_1.7-5+b7 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20151024-2 libubsan0_5.3.1-7+rpi1 libudev1_228-4 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-28 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-1 libxapian22v5_1.2.22-1 libxml2_2.9.3+dfsg1-1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_4.1+Debian13+rpi1+nmu1 make_4.0-8.2 makedev_2.3.1-93 man-db_2.7.5-1 manpages_4.04-0.1 mawk_1.3.3-17 mount_2.27.1-1 multiarch-support_2.21-6 nano_2.4.3-1 ncurses-base_6.0+20151024-2 ncurses-bin_6.0+20151024-2 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.1-4 perl-base_5.22.1-4 perl-modules-5.22_5.22.1-4 po-debconf_1.0.19 procps_2:3.3.11-3 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 samtools_1.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-pbbam-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_228-4 systemd-sysv_228-4 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 tar_1.28-2.1 tzdata_2015g-1 udev_228-4 util-linux_2.27.1-1 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1

┌──────────────────────────────────────────────────────────────────────────────┐
│ Build                                                                        │
└──────────────────────────────────────────────────────────────────────────────┘


Unpack source
─────────────

gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Fri Sep 18 12:08:55 2015 UTC using RSA key ID D1C646D1
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./pbbam_0.1.0~20150813+git4e9e417+dfsg-1.dsc
dpkg-source: info: extracting pbbam in pbbam-0.1.0~20150813+git4e9e417+dfsg
dpkg-source: info: unpacking pbbam_0.1.0~20150813+git4e9e417+dfsg.orig.tar.xz
dpkg-source: info: unpacking pbbam_0.1.0~20150813+git4e9e417+dfsg-1.debian.tar.xz
dpkg-source: info: applying set-samtools-path
dpkg-source: info: applying ssl-md5
dpkg-source: info: applying dont-try-building-gtest
dpkg-source: info: applying gcc5

Check disc space
────────────────

Sufficient free space for build

User Environment
────────────────

DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-416cb53b-aaca-4905-b9cb-a5d0935e6192
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
─────────────────

dpkg-buildpackage: source package pbbam
dpkg-buildpackage: source version 0.1.0~20150813+git4e9e417+dfsg-1
dpkg-buildpackage: source distribution unstable
 dpkg-source --before-build pbbam-0.1.0~20150813+git4e9e417+dfsg
dpkg-buildpackage: host architecture armhf
 fakeroot debian/rules clean
dh clean --parallel
   dh_testdir -O--parallel
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg'
dh_auto_clean
rm -f debian/libpbbam.install
make[1]: Leaving directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg'
   dh_clean -O--parallel
 debian/rules build-arch
dh build-arch --parallel
   dh_testdir -a -O--parallel
   dh_update_autotools_config -a -O--parallel
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg'
dh_auto_configure -- \
-DPacBioBAM_build_shared=ON \
-DPacBioBAM_build_tests=OFF \
-DCMAKE_LIBRARY_PATH=arm-linux-gnueabihf \
-DHTSLIB_INCLUDE_DIRS=/usr/include \
-DHTSLIB_LIBRARIES=/usr/lib \
-DCMAKE_SHARED_LINKER_FLAGS="-lssl -lhts -Wl,-z,relro"
	cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DPacBioBAM_build_shared=ON -DPacBioBAM_build_tests=OFF -DCMAKE_LIBRARY_PATH=arm-linux-gnueabihf -DHTSLIB_INCLUDE_DIRS=/usr/include -DHTSLIB_LIBRARIES=/usr/lib "-DCMAKE_SHARED_LINKER_FLAGS=-lssl -lhts -Wl,-z,relro"
-- The CXX compiler identification is GNU 5.3.1
-- The C compiler identification is GNU 5.3.1
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Boost version: 1.58.0
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.8") 
-- Performing Test HAS_NO_UNUSED_LOCAL_TYPEDEFS
-- Performing Test HAS_NO_UNUSED_LOCAL_TYPEDEFS - Success
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Found Doxygen: /usr/bin/doxygen (found version "1.8.9.1") 
-- Configuring done
WARNING: Target "pbbam" requests linking to directory "/usr/lib".  Targets may link only to libraries.  CMake is dropping the item.
WARNING: Target "pbindex" requests linking to directory "/usr/lib".  Targets may link only to libraries.  CMake is dropping the item.
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR


-- Build files have been written to: /«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf
make[1]: Leaving directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg'
   dh_auto_build -a -O--parallel
	make -j4
make[1]: Entering directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -H"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg" -B"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf" --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/CMakeFiles" "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks"
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/pbbam.dir/build.make src/CMakeFiles/pbbam.dir/depend
make[3]: Entering directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg" "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src" "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf" "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src/CMakeFiles/pbbam.dir/DependInfo.cmake" --color=
Scanning dependencies of target pbbam
make[3]: Leaving directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/pbbam.dir/build.make src/CMakeFiles/pbbam.dir/build
make[3]: Entering directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
[  5%] Building CXX object src/CMakeFiles/pbbam.dir/Accuracy.cpp.o
[  5%] Building CXX object src/CMakeFiles/pbbam.dir/AlignmentPrinter.cpp.o
[  5%] Building CXX object src/CMakeFiles/pbbam.dir/AssertUtils.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/AlignmentPrinter.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/AlignmentPrinter.cpp"
[  7%] Building CXX object src/CMakeFiles/pbbam.dir/BamFile.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/AssertUtils.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/AssertUtils.cpp"
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/Accuracy.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/Accuracy.cpp"
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/BamFile.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/BamFile.cpp"
[  9%] Building CXX object src/CMakeFiles/pbbam.dir/BamHeader.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/BamHeader.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/BamHeader.cpp"
[ 11%] Building CXX object src/CMakeFiles/pbbam.dir/BamRecord.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/BamRecord.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/BamRecord.cpp"
[ 12%] Building CXX object src/CMakeFiles/pbbam.dir/BamRecordBuilder.cpp.o
[ 14%] Building CXX object src/CMakeFiles/pbbam.dir/BamRecordImpl.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/BamRecordBuilder.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/BamRecordBuilder.cpp"
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/BamRecordImpl.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/BamRecordImpl.cpp"
[ 16%] Building CXX object src/CMakeFiles/pbbam.dir/BamTagCodec.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/BamTagCodec.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/BamTagCodec.cpp"
[ 18%] Building CXX object src/CMakeFiles/pbbam.dir/BamWriter.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/BamWriter.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/BamWriter.cpp"
[ 20%] Building CXX object src/CMakeFiles/pbbam.dir/Cigar.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/Cigar.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/Cigar.cpp"
[ 22%] Building CXX object src/CMakeFiles/pbbam.dir/CigarOperation.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/CigarOperation.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/CigarOperation.cpp"
[ 24%] Building CXX object src/CMakeFiles/pbbam.dir/Config.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/Config.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/Config.cpp"
[ 25%] Building CXX object src/CMakeFiles/pbbam.dir/DataSet.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/DataSet.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/DataSet.cpp"
[ 27%] Building CXX object src/CMakeFiles/pbbam.dir/DataSetBaseTypes.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/DataSetBaseTypes.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/DataSetBaseTypes.cpp"
[ 29%] Building CXX object src/CMakeFiles/pbbam.dir/DataSetElement.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/DataSetElement.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/DataSetElement.cpp"
[ 31%] Building CXX object src/CMakeFiles/pbbam.dir/DataSetIO.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/DataSetIO.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/DataSetIO.cpp"
[ 33%] Building CXX object src/CMakeFiles/pbbam.dir/DataSetTypes.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/DataSetTypes.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/DataSetTypes.cpp"
[ 35%] Building CXX object src/CMakeFiles/pbbam.dir/DataSetXsd.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/DataSetXsd.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/DataSetXsd.cpp"
[ 37%] Building CXX object src/CMakeFiles/pbbam.dir/EntireFileQuery.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/EntireFileQuery.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/EntireFileQuery.cpp"
[ 38%] Building CXX object src/CMakeFiles/pbbam.dir/FilterEngine.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/FilterEngine.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/FilterEngine.cpp"
[ 40%] Building CXX object src/CMakeFiles/pbbam.dir/FofnReader.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/FofnReader.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/FofnReader.cpp"
[ 42%] Building CXX object src/CMakeFiles/pbbam.dir/Frames.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/Frames.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/Frames.cpp"
[ 44%] Building CXX object src/CMakeFiles/pbbam.dir/GenomicInterval.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/GenomicInterval.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/GenomicInterval.cpp"
[ 46%] Building CXX object src/CMakeFiles/pbbam.dir/GenomicIntervalQuery.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/GenomicIntervalQuery.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/GenomicIntervalQuery.cpp"
[ 48%] Building CXX object src/CMakeFiles/pbbam.dir/GroupQuery.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/GroupQuery.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/GroupQuery.cpp"
[ 50%] Building CXX object src/CMakeFiles/pbbam.dir/IndexedFastaReader.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/IndexedFastaReader.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/IndexedFastaReader.cpp"
[ 51%] Building CXX object src/CMakeFiles/pbbam.dir/MemoryUtils.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/MemoryUtils.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/MemoryUtils.cpp"
[ 53%] Building CXX object src/CMakeFiles/pbbam.dir/PbiBuilder.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/PbiBuilder.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/PbiBuilder.cpp"
[ 55%] Building CXX object src/CMakeFiles/pbbam.dir/PbiFile.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/PbiFile.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/PbiFile.cpp"
[ 57%] Building CXX object src/CMakeFiles/pbbam.dir/PbiIndex.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/PbiIndex.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/PbiIndex.cpp"
[ 59%] Building CXX object src/CMakeFiles/pbbam.dir/PbiIndexIO.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/PbiIndexIO.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/PbiIndexIO.cpp"
[ 61%] Building CXX object src/CMakeFiles/pbbam.dir/PbiRawData.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/PbiRawData.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/PbiRawData.cpp"
[ 62%] Building CXX object src/CMakeFiles/pbbam.dir/ProgramInfo.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/ProgramInfo.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/ProgramInfo.cpp"
[ 64%] Building CXX object src/CMakeFiles/pbbam.dir/QualityValue.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/QualityValue.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/QualityValue.cpp"
[ 66%] Building CXX object src/CMakeFiles/pbbam.dir/QueryBase.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/QueryBase.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/QueryBase.cpp"
[ 68%] Building CXX object src/CMakeFiles/pbbam.dir/ReadGroupInfo.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/ReadGroupInfo.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/ReadGroupInfo.cpp"
[ 70%] Building CXX object src/CMakeFiles/pbbam.dir/SamTagCodec.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/SamTagCodec.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/SamTagCodec.cpp"
[ 72%] Building CXX object src/CMakeFiles/pbbam.dir/SequenceInfo.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/SequenceInfo.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/SequenceInfo.cpp"
[ 74%] Building CXX object src/CMakeFiles/pbbam.dir/Tag.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/Tag.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/Tag.cpp"
[ 75%] Building CXX object src/CMakeFiles/pbbam.dir/TagCollection.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/TagCollection.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/TagCollection.cpp"
[ 77%] Building CXX object src/CMakeFiles/pbbam.dir/XmlReader.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/XmlReader.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/XmlReader.cpp"
[ 79%] Building CXX object src/CMakeFiles/pbbam.dir/XmlWriter.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/XmlWriter.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/XmlWriter.cpp"
[ 81%] Building CXX object src/CMakeFiles/pbbam.dir/ZmwGroupQuery.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/ZmwGroupQuery.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/ZmwGroupQuery.cpp"
[ 83%] Building CXX object src/CMakeFiles/pbbam.dir/ZmwQuery.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/ZmwQuery.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/ZmwQuery.cpp"
[ 85%] Building CXX object src/CMakeFiles/pbbam.dir/VirtualPolymeraseBamRecord.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/VirtualPolymeraseBamRecord.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/VirtualPolymeraseBamRecord.cpp"
[ 87%] Building CXX object src/CMakeFiles/pbbam.dir/VirtualPolymeraseReader.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/VirtualPolymeraseReader.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/VirtualPolymeraseReader.cpp"
[ 88%] Building CXX object src/CMakeFiles/pbbam.dir/VirtualRegionTypeMap.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/VirtualRegionTypeMap.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/VirtualRegionTypeMap.cpp"
[ 90%] Building CXX object src/CMakeFiles/pbbam.dir/pugixml/pugixml.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/c++   -DPBBAM_LIBRARY -Dpbbam_EXPORTS -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -fPIC   -o CMakeFiles/pbbam.dir/pugixml/pugixml.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/src/pugixml/pugixml.cpp"
[ 92%] Linking CXX shared library ../../lib/libpbbam.so
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/src" && /usr/bin/cmake -E cmake_link_script CMakeFiles/pbbam.dir/link.txt --verbose=1
/usr/bin/c++  -fPIC -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs -lssl -lhts -Wl,-z,relro -shared -Wl,-soname,libpbbam.so -o ../../lib/libpbbam.so CMakeFiles/pbbam.dir/Accuracy.cpp.o CMakeFiles/pbbam.dir/AlignmentPrinter.cpp.o CMakeFiles/pbbam.dir/AssertUtils.cpp.o CMakeFiles/pbbam.dir/BamFile.cpp.o CMakeFiles/pbbam.dir/BamHeader.cpp.o CMakeFiles/pbbam.dir/BamRecord.cpp.o CMakeFiles/pbbam.dir/BamRecordBuilder.cpp.o CMakeFiles/pbbam.dir/BamRecordImpl.cpp.o CMakeFiles/pbbam.dir/BamTagCodec.cpp.o CMakeFiles/pbbam.dir/BamWriter.cpp.o CMakeFiles/pbbam.dir/Cigar.cpp.o CMakeFiles/pbbam.dir/CigarOperation.cpp.o CMakeFiles/pbbam.dir/Config.cpp.o CMakeFiles/pbbam.dir/DataSet.cpp.o CMakeFiles/pbbam.dir/DataSetBaseTypes.cpp.o CMakeFiles/pbbam.dir/DataSetElement.cpp.o CMakeFiles/pbbam.dir/DataSetIO.cpp.o CMakeFiles/pbbam.dir/DataSetTypes.cpp.o CMakeFiles/pbbam.dir/DataSetXsd.cpp.o CMakeFiles/pbbam.dir/EntireFileQuery.cpp.o CMakeFiles/pbbam.dir/FilterEngine.cpp.o CMakeFiles/pbbam.dir/FofnReader.cpp.o CMakeFiles/pbbam.dir/Frames.cpp.o CMakeFiles/pbbam.dir/GenomicInterval.cpp.o CMakeFiles/pbbam.dir/GenomicIntervalQuery.cpp.o CMakeFiles/pbbam.dir/GroupQuery.cpp.o CMakeFiles/pbbam.dir/IndexedFastaReader.cpp.o CMakeFiles/pbbam.dir/MemoryUtils.cpp.o CMakeFiles/pbbam.dir/PbiBuilder.cpp.o CMakeFiles/pbbam.dir/PbiFile.cpp.o CMakeFiles/pbbam.dir/PbiIndex.cpp.o CMakeFiles/pbbam.dir/PbiIndexIO.cpp.o CMakeFiles/pbbam.dir/PbiRawData.cpp.o CMakeFiles/pbbam.dir/ProgramInfo.cpp.o CMakeFiles/pbbam.dir/QualityValue.cpp.o CMakeFiles/pbbam.dir/QueryBase.cpp.o CMakeFiles/pbbam.dir/ReadGroupInfo.cpp.o CMakeFiles/pbbam.dir/SamTagCodec.cpp.o CMakeFiles/pbbam.dir/SequenceInfo.cpp.o CMakeFiles/pbbam.dir/Tag.cpp.o CMakeFiles/pbbam.dir/TagCollection.cpp.o CMakeFiles/pbbam.dir/XmlReader.cpp.o CMakeFiles/pbbam.dir/XmlWriter.cpp.o CMakeFiles/pbbam.dir/ZmwGroupQuery.cpp.o CMakeFiles/pbbam.dir/ZmwQuery.cpp.o CMakeFiles/pbbam.dir/VirtualPolymeraseBamRecord.cpp.o CMakeFiles/pbbam.dir/VirtualPolymeraseReader.cpp.o CMakeFiles/pbbam.dir/VirtualRegionTypeMap.cpp.o CMakeFiles/pbbam.dir/pugixml/pugixml.cpp.o -lz -lpthread 
make[3]: Leaving directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Built target pbbam
make -f tools/pbindex/CMakeFiles/pbindex.dir/build.make tools/pbindex/CMakeFiles/pbindex.dir/depend
make[3]: Entering directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg" "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/tools/pbindex" "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf" "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/tools/pbindex" "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/tools/pbindex/CMakeFiles/pbindex.dir/DependInfo.cmake" --color=
Scanning dependencies of target pbindex
make[3]: Leaving directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
make -f tools/pbindex/CMakeFiles/pbindex.dir/build.make tools/pbindex/CMakeFiles/pbindex.dir/build
make[3]: Entering directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Building CXX object tools/pbindex/CMakeFiles/pbindex.dir/src/OptionParser.cpp.o
[ 96%] Building CXX object tools/pbindex/CMakeFiles/pbindex.dir/src/main.cpp.o
[ 98%] Building CXX object tools/pbindex/CMakeFiles/pbindex.dir/src/PbIndex.cpp.o
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/tools/pbindex" && /usr/bin/c++    -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/tools/pbindex/src" -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs   -o CMakeFiles/pbindex.dir/src/main.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/tools/pbindex/src/main.cpp"
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/tools/pbindex" && /usr/bin/c++    -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/tools/pbindex/src" -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs   -o CMakeFiles/pbindex.dir/src/OptionParser.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/tools/pbindex/src/OptionParser.cpp"
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/tools/pbindex" && /usr/bin/c++    -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/tools/pbindex/src" -I"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/include"  -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs   -o CMakeFiles/pbindex.dir/src/PbIndex.cpp.o -c "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/tools/pbindex/src/PbIndex.cpp"
[100%] Linking CXX executable ../../../bin/pbindex
cd "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/tools/pbindex" && /usr/bin/cmake -E cmake_link_script CMakeFiles/pbindex.dir/link.txt --verbose=1
/usr/bin/c++   -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -std=c++11 -Wall -Wno-sign-compare -Wno-unused-local-typedefs   -Wl,-z,relro CMakeFiles/pbindex.dir/src/main.cpp.o CMakeFiles/pbindex.dir/src/OptionParser.cpp.o CMakeFiles/pbindex.dir/src/PbIndex.cpp.o  -o ../../../bin/pbindex -rdynamic ../../../lib/libpbbam.so -lz -lpthread -Wl,-rpath,"/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/lib" 
make[3]: Leaving directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target pbindex
make[2]: Leaving directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start "/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf/CMakeFiles" 0
make[1]: Leaving directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg/obj-arm-linux-gnueabihf'
 fakeroot debian/rules binary-arch
dh binary-arch --parallel
   dh_testroot -a -O--parallel
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   debian/rules override_dh_install
make[1]: Entering directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg'
sed 's/@MULTIARCH@/arm-linux-gnueabihf/g' \
debian/libpbbam.install.in > debian/libpbbam.install
dh_install
make[1]: Leaving directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg'
   dh_installdocs -a -O--parallel
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg'
dh_installchangelogs CHANGELOG.md
make[1]: Leaving directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg'
   dh_perl -a -O--parallel
   debian/rules override_dh_link
make[1]: Entering directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg'
dh_link --package=libpbbam-dev \
/usr/lib/arm-linux-gnueabihf/pbbam/libpbbam.so \
/usr/lib/arm-linux-gnueabihf/libpbbam.so
dh_link --remaining-packages
make[1]: Leaving directory '/«BUILDDIR»/pbbam-0.1.0~20150813+git4e9e417+dfsg'
   dh_strip_nondeterminism -a -O--parallel
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   dh_fixperms -a -O--parallel
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dpkg-shlibdeps: warning: debian/libpbbam/usr/lib/arm-linux-gnueabihf/pbbam/libpbbam.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libpbbam/usr/lib/arm-linux-gnueabihf/pbbam/libpbbam.so was not linked against libz.so.1 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libpbbam/usr/lib/arm-linux-gnueabihf/pbbam/libpbbam.so was not linked against libssl.so.1.0.2 (it uses none of the library's symbols)
   dh_installdeb -a -O--parallel
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dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
   dh_md5sums -a -O--parallel
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dpkg-deb: building package 'libpbbam-dev' in '../libpbbam-dev_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb'.
dpkg-deb: building package 'libpbbam-dbgsym' in '../libpbbam-dbgsym_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb'.
dpkg-deb: building package 'libpbbam' in '../libpbbam_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb'.
 dpkg-genchanges -B -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../pbbam_0.1.0~20150813+git4e9e417+dfsg-1_armhf.changes
dpkg-genchanges: warning: package libpbbam-dbgsym listed in files list but not in control info
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build pbbam-0.1.0~20150813+git4e9e417+dfsg
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20160201-0225

Finished
────────

I: Built successfully

┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build Chroot                                                            │
└──────────────────────────────────────────────────────────────────────────────┘


┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘


pbbam_0.1.0~20150813+git4e9e417+dfsg-1_armhf.changes:
─────────────────────────────────────────────────────

Format: 1.8
Date: Fri, 18 Sep 2015 02:40:24 -0700
Source: pbbam
Binary: libpbbam libpbbam-dev
Architecture: armhf
Version: 0.1.0~20150813+git4e9e417+dfsg-1
Distribution: stretch-staging
Urgency: low
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Afif Elghraoui <afif@ghraoui.name>
Description:
 libpbbam   - Pacific Biosciences binary alignment/map (BAM) library
 libpbbam-dev - Pacific Biosciences binary alignment/map (BAM) library (headers)
Closes: 798220
Changes:
 pbbam (0.1.0~20150813+git4e9e417+dfsg-1) unstable; urgency=low
 .
   * Initial release (Closes: #798220)
Checksums-Sha1:
 5df3e64ff91f59713e4b0c3ac82b1f10a3924b24 4978078 libpbbam-dbgsym_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb
 7b0145a73ce5d0dfb39df4fab19caa362e2b0842 52038 libpbbam-dev_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb
 aae6e68ec38fca29c10695482ad68dc419749fa1 269662 libpbbam_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb
Checksums-Sha256:
 fb191fa34a9c7d00f3b6800d5f64e597b4f68149ac3f1eb9b837b2a28f20a855 4978078 libpbbam-dbgsym_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb
 947248d64c2df7c7a9ebe62c9a28e765833dcbfd7bc226fedb5678aced90dfc4 52038 libpbbam-dev_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb
 8f7a32a028d0b4263bd0444d7a7c70a931df670085f57944b98b3ed1f1a08200 269662 libpbbam_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb
Files:
 e1246630d4a352da6c11d6bf18ffa955 4978078 debug extra libpbbam-dbgsym_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb
 cf4d90ed0eb3023b55d3d3818ad31d69 52038 libdevel optional libpbbam-dev_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb
 46ab4e16c4a73cab4c78f321ecac9e9b 269662 libs optional libpbbam_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb

┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents                                                             │
└──────────────────────────────────────────────────────────────────────────────┘


libpbbam-dbgsym_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb
──────────────────────────────────────────────────────────

 new debian package, version 2.0.
 size 4978078 bytes: control archive=533 bytes.
     490 bytes,    14 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: libpbbam-dbgsym
 Source: pbbam
 Version: 0.1.0~20150813+git4e9e417+dfsg-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 5192
 Depends: libpbbam (= 0.1.0~20150813+git4e9e417+dfsg-1)
 Section: debug
 Priority: extra
 Multi-Arch: same
 Homepage: https://github.com/PacificBiosciences/pbbam
 Description: Debug symbols for libpbbam
 Auto-Built-Package: debug-symbols
 Build-Ids: a53418ef45135efc3ee0ee2f86d28d374a14934b

drwxr-xr-x root/root         0 2016-02-01 02:25 ./
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/lib/
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/lib/debug/
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/lib/debug/.build-id/a5/
-rw-r--r-- root/root   5305748 2016-02-01 02:25 ./usr/lib/debug/.build-id/a5/3418ef45135efc3ee0ee2f86d28d374a14934b.debug
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/share/
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/share/doc/
lrwxrwxrwx root/root         0 2016-02-01 02:25 ./usr/share/doc/libpbbam-dbgsym -> libpbbam


libpbbam-dev_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb
───────────────────────────────────────────────────────

 new debian package, version 2.0.
 size 52038 bytes: control archive=2789 bytes.
    1007 bytes,    22 lines      control              
    5017 bytes,    71 lines      md5sums              
 Package: libpbbam-dev
 Source: pbbam
 Version: 0.1.0~20150813+git4e9e417+dfsg-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 490
 Depends: libpbbam (= 0.1.0~20150813+git4e9e417+dfsg-1)
 Section: libdevel
 Priority: optional
 Homepage: https://github.com/PacificBiosciences/pbbam
 Description: Pacific Biosciences binary alignment/map (BAM) library (headers)
  The BAM format is a binary, compressed, record-oriented container format
  for raw or aligned sequence reads. The associated SAM format is a text
  representation of the same data. The specifications for BAM/SAM are maintained
  by the SAM/BAM Format Specification Working Group.
  .
  PacBio-produced BAM files are fully compatible with the BAM specification,
  but makes use of the extensibility mechanisms of the BAM specification to
  encode PacBio-specific information. The pbbam library provides tools to
  work with these files
  .
  This package contains the library header files.

drwxr-xr-x root/root         0 2016-02-01 02:25 ./
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/
drwxr-xr-x root/root         0 2016-02-01 02:24 ./usr/include/
drwxr-xr-x root/root         0 2015-08-13 14:26 ./usr/include/pbbam/
-rw-r--r-- root/root      3061 2015-08-13 14:26 ./usr/include/pbbam/Accuracy.h
-rw-r--r-- root/root      2921 2015-08-13 14:26 ./usr/include/pbbam/AlignmentPrinter.h
-rw-r--r-- root/root      5029 2015-08-13 14:26 ./usr/include/pbbam/BamFile.h
-rw-r--r-- root/root      5090 2015-08-13 14:26 ./usr/include/pbbam/BamHeader.h
-rw-r--r-- root/root      3445 2015-08-13 14:26 ./usr/include/pbbam/BamReader.h
-rw-r--r-- root/root     36720 2015-08-13 14:26 ./usr/include/pbbam/BamRecord.h
-rw-r--r-- root/root      8734 2015-08-13 14:26 ./usr/include/pbbam/BamRecordBuilder.h
-rw-r--r-- root/root     22441 2015-08-13 14:26 ./usr/include/pbbam/BamRecordImpl.h
-rw-r--r-- root/root      2842 2015-08-13 14:26 ./usr/include/pbbam/BamTagCodec.h
-rw-r--r-- root/root      5194 2015-08-13 14:26 ./usr/include/pbbam/BamWriter.h
-rw-r--r-- root/root      3537 2015-08-13 14:26 ./usr/include/pbbam/Cigar.h
-rw-r--r-- root/root      7807 2015-08-13 14:26 ./usr/include/pbbam/CigarOperation.h
-rw-r--r-- root/root      4068 2015-08-13 14:26 ./usr/include/pbbam/Config.h
-rw-r--r-- root/root      6339 2015-08-13 14:26 ./usr/include/pbbam/DataSet.h
-rw-r--r-- root/root      8693 2015-08-13 14:26 ./usr/include/pbbam/DataSetTypes.h
-rw-r--r-- root/root      3291 2015-08-13 14:26 ./usr/include/pbbam/DataSetXsd.h
-rw-r--r-- root/root      2240 2015-08-13 14:26 ./usr/include/pbbam/EntireFileQuery.h
-rw-r--r-- root/root      6359 2015-08-13 14:26 ./usr/include/pbbam/Frames.h
-rw-r--r-- root/root      6813 2015-08-13 14:26 ./usr/include/pbbam/GenomicInterval.h
-rw-r--r-- root/root      2555 2015-08-13 14:26 ./usr/include/pbbam/GenomicIntervalQuery.h
-rw-r--r-- root/root      3148 2015-08-13 14:26 ./usr/include/pbbam/GroupQuery.h
-rw-r--r-- root/root      6332 2015-08-13 14:26 ./usr/include/pbbam/GroupQueryBase.h
-rw-r--r-- root/root      3811 2015-08-13 14:26 ./usr/include/pbbam/IndexedFastaReader.h
-rw-r--r-- root/root      6354 2015-08-13 14:26 ./usr/include/pbbam/Interval.h
-rw-r--r-- root/root      2443 2015-08-13 14:26 ./usr/include/pbbam/LocalContextFlags.h
-rw-r--r-- root/root      2029 2015-08-13 14:26 ./usr/include/pbbam/Orientation.h
-rw-r--r-- root/root      4222 2015-08-13 14:26 ./usr/include/pbbam/PbiBuilder.h
-rw-r--r-- root/root      2975 2015-08-13 14:26 ./usr/include/pbbam/PbiFile.h
-rw-r--r-- root/root     10850 2015-08-13 14:26 ./usr/include/pbbam/PbiIndex.h
-rw-r--r-- root/root      8968 2015-08-13 14:26 ./usr/include/pbbam/PbiRawData.h
-rw-r--r-- root/root      2262 2015-08-13 14:26 ./usr/include/pbbam/Position.h
-rw-r--r-- root/root      5528 2015-08-13 14:26 ./usr/include/pbbam/ProgramInfo.h
-rw-r--r-- root/root      3570 2015-08-13 14:26 ./usr/include/pbbam/QualityValue.h
-rw-r--r-- root/root      8110 2015-08-13 14:26 ./usr/include/pbbam/QualityValues.h
-rw-r--r-- root/root      6815 2015-08-13 14:26 ./usr/include/pbbam/QueryBase.h
-rw-r--r-- root/root     11629 2015-08-13 14:26 ./usr/include/pbbam/ReadGroupInfo.h
-rw-r--r-- root/root      2202 2015-08-13 14:26 ./usr/include/pbbam/SamTagCodec.h
-rw-r--r-- root/root      5454 2015-08-13 14:26 ./usr/include/pbbam/SequenceInfo.h
-rw-r--r-- root/root      2010 2015-08-13 14:26 ./usr/include/pbbam/Strand.h
-rw-r--r-- root/root     12927 2015-08-13 14:26 ./usr/include/pbbam/Tag.h
-rw-r--r-- root/root      2172 2015-08-13 14:26 ./usr/include/pbbam/TagCollection.h
-rw-r--r-- root/root      2527 2015-08-13 14:26 ./usr/include/pbbam/UnmappedReadsQuery.h
-rw-r--r-- root/root      2418 2015-08-13 14:26 ./usr/include/pbbam/ZmwGroupQuery.h
-rw-r--r-- root/root      2343 2015-08-13 14:26 ./usr/include/pbbam/ZmwQuery.h
drwxr-xr-x root/root         0 2015-08-13 14:26 ./usr/include/pbbam/internal/
-rw-r--r-- root/root      4334 2015-08-13 14:26 ./usr/include/pbbam/internal/BamRecordSort.h
-rw-r--r-- root/root      6796 2015-08-13 14:26 ./usr/include/pbbam/internal/DataSet.inl
-rw-r--r-- root/root      6200 2015-08-13 14:26 ./usr/include/pbbam/internal/DataSetBaseTypes.h
-rw-r--r-- root/root      7976 2015-08-13 14:26 ./usr/include/pbbam/internal/DataSetBaseTypes.inl
-rw-r--r-- root/root      5739 2015-08-13 14:26 ./usr/include/pbbam/internal/DataSetElement.h
-rw-r--r-- root/root     11604 2015-08-13 14:26 ./usr/include/pbbam/internal/DataSetElement.inl
-rw-r--r-- root/root      3869 2015-08-13 14:26 ./usr/include/pbbam/internal/DataSetListElement.h
-rw-r--r-- root/root      6005 2015-08-13 14:26 ./usr/include/pbbam/internal/DataSetListElement.inl
-rw-r--r-- root/root      5188 2015-08-13 14:26 ./usr/include/pbbam/internal/DataSetTypes.inl
-rw-r--r-- root/root      2357 2015-08-13 14:26 ./usr/include/pbbam/internal/FilterEngine.h
-rw-r--r-- root/root      2749 2015-08-13 14:26 ./usr/include/pbbam/internal/IBamFileIterator.h
-rw-r--r-- root/root      2457 2015-08-13 14:26 ./usr/include/pbbam/internal/IMergeStrategy.h
-rw-r--r-- root/root      2564 2015-08-13 14:26 ./usr/include/pbbam/internal/MergeItem.h
-rw-r--r-- root/root      7148 2015-08-13 14:26 ./usr/include/pbbam/internal/MergeStrategy.h
-rw-r--r-- root/root     32304 2015-08-13 14:26 ./usr/include/pbbam/internal/PbiIndex_p.h
-rw-r--r-- root/root     30669 2015-08-13 14:26 ./usr/include/pbbam/internal/PbiIndex_p.inl
-rw-r--r-- root/root      6306 2015-08-13 14:26 ./usr/include/pbbam/internal/QueryBase.h
-rw-r--r-- root/root      2712 2015-08-13 14:26 ./usr/include/pbbam/internal/SequentialMergeStrategy.h
-rw-r--r-- root/root     11657 2015-08-13 14:26 ./usr/include/pbbam/internal/Tag.inl
drwxr-xr-x root/root         0 2015-08-13 14:26 ./usr/include/pbbam/virtual/
-rw-r--r-- root/root      5099 2015-08-13 14:26 ./usr/include/pbbam/virtual/VirtualPolymeraseBamRecord.h
-rw-r--r-- root/root      3889 2015-08-13 14:26 ./usr/include/pbbam/virtual/VirtualPolymeraseReader.h
-rw-r--r-- root/root      3597 2015-08-13 14:26 ./usr/include/pbbam/virtual/VirtualRegion.h
-rw-r--r-- root/root      2185 2015-08-13 14:26 ./usr/include/pbbam/virtual/VirtualRegionType.h
-rw-r--r-- root/root      2237 2015-08-13 14:26 ./usr/include/pbbam/virtual/VirtualRegionTypeMap.h
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/lib/
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root         0 2016-02-01 02:25 ./usr/lib/arm-linux-gnueabihf/libpbbam.so -> pbbam/libpbbam.so
drwxr-xr-x root/root         0 2016-02-01 02:24 ./usr/share/
drwxr-xr-x root/root         0 2016-02-01 02:24 ./usr/share/doc/
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/share/doc/libpbbam-dev/
-rw-r--r-- root/root       172 2015-09-18 12:05 ./usr/share/doc/libpbbam-dev/changelog.Debian.gz
-rw-r--r-- root/root      2670 2015-08-13 14:26 ./usr/share/doc/libpbbam-dev/changelog.gz
-rw-r--r-- root/root      6216 2015-09-18 12:05 ./usr/share/doc/libpbbam-dev/copyright


libpbbam_0.1.0~20150813+git4e9e417+dfsg-1_armhf.deb
───────────────────────────────────────────────────

 new debian package, version 2.0.
 size 269662 bytes: control archive=918 bytes.
    1028 bytes,    21 lines      control              
     294 bytes,     4 lines      md5sums              
 Package: libpbbam
 Source: pbbam
 Version: 0.1.0~20150813+git4e9e417+dfsg-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 999
 Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), libhts1 (>= 1.1), libssl1.0.2 (>= 1.0.2d), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
 Section: libs
 Priority: optional
 Multi-Arch: same
 Homepage: https://github.com/PacificBiosciences/pbbam
 Description: Pacific Biosciences binary alignment/map (BAM) library
  The BAM format is a binary, compressed, record-oriented container format
  for raw or aligned sequence reads. The associated SAM format is a text
  representation of the same data. The specifications for BAM/SAM are maintained
  by the SAM/BAM Format Specification Working Group.
  .
  PacBio-produced BAM files are fully compatible with the BAM specification,
  but makes use of the extensibility mechanisms of the BAM specification to
  encode PacBio-specific information. The pbbam library provides tools to
  work with these files

drwxr-xr-x root/root         0 2016-02-01 02:25 ./
drwxr-xr-x root/root         0 2016-02-01 02:24 ./usr/
drwxr-xr-x root/root         0 2016-02-01 02:24 ./usr/lib/
drwxr-xr-x root/root         0 2016-02-01 02:24 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/lib/arm-linux-gnueabihf/pbbam/
-rw-r--r-- root/root   1002068 2016-02-01 02:25 ./usr/lib/arm-linux-gnueabihf/pbbam/libpbbam.so
drwxr-xr-x root/root         0 2016-02-01 02:24 ./usr/share/
drwxr-xr-x root/root         0 2016-02-01 02:24 ./usr/share/doc/
drwxr-xr-x root/root         0 2016-02-01 02:25 ./usr/share/doc/libpbbam/
-rw-r--r-- root/root       172 2015-09-18 12:05 ./usr/share/doc/libpbbam/changelog.Debian.gz
-rw-r--r-- root/root      2670 2015-08-13 14:26 ./usr/share/doc/libpbbam/changelog.gz
-rw-r--r-- root/root      6216 2015-09-18 12:05 ./usr/share/doc/libpbbam/copyright


┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build                                                                   │
└──────────────────────────────────────────────────────────────────────────────┘


┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use

┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary                                                                      │
└──────────────────────────────────────────────────────────────────────────────┘

Build Architecture: armhf
Build-Space: 73628
Build-Time: 608
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 439
Job: pbbam_0.1.0~20150813+git4e9e417+dfsg-1
Machine Architecture: armhf
Package: pbbam
Package-Time: 1091
Source-Version: 0.1.0~20150813+git4e9e417+dfsg-1
Space: 73628
Status: successful
Version: 0.1.0~20150813+git4e9e417+dfsg-1
────────────────────────────────────────────────────────────────────────────────
Finished at 20160201-0225
Build needed 00:18:11, 73628k disc space

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