minimap2 →
2.24+dfsg-3+b1 →
armhf → 2023-02-01 07:34:07
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd
+==============================================================================+
| minimap2 2.24+dfsg-3+b1 (armhf) Wed, 01 Feb 2023 06:47:32 +0000 |
+==============================================================================+
Package: minimap2
Version: 2.24+dfsg-3+b1
Source Version: 2.24+dfsg-3
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-e2cb9fb9-48cd-4cab-a48c-ed1267a8e0dc' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.6 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.4 MB]
Fetched 28.1 MB in 30s (934 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'minimap2' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/minimap2.git
Please use:
git clone https://salsa.debian.org/med-team/minimap2.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 209 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main minimap2 2.24+dfsg-3 (dsc) [2316 B]
Get:2 http://172.17.4.1/private bookworm-staging/main minimap2 2.24+dfsg-3 (tar) [195 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main minimap2 2.24+dfsg-3 (diff) [11.2 kB]
Fetched 209 kB in 0s (1176 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/minimap2-JvJC1M/minimap2-2.24+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/minimap2-JvJC1M' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-wiuOit/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-wiuOit/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-wiuOit/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2889 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 90 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (23.2 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12958 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), python3-setuptools, dh-python, cython3, python3-all-dev, d-shlibs, zlib1g-dev, texlive-latex-extra, texlive-science, texlive-font-utils, ghostscript, gnuplot, libsimde-dev
Filtered Build-Depends: debhelper-compat (= 13), python3-setuptools, dh-python, cython3, python3-all-dev, d-shlibs, zlib1g-dev, texlive-latex-extra, texlive-science, texlive-font-utils, ghostscript, gnuplot, libsimde-dev
dpkg-deb: building package 'sbuild-build-depends-minimap2-dummy' in '/<<BUILDDIR>>/resolver-wiuOit/apt_archive/sbuild-build-depends-minimap2-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-minimap2-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ Sources [585 B]
Get:5 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ Packages [664 B]
Fetched 2582 B in 1s (3594 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install minimap2 build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
adwaita-icon-theme aglfn at-spi2-common autoconf automake autopoint
autotools-dev bsdextrautils cython3 d-shlibs dbus dbus-bin dbus-daemon
dbus-session-bus-common dbus-system-bus-common dbus-user-session
dconf-gsettings-backend dconf-service debhelper dh-autoreconf dh-python
dh-strip-nondeterminism dmsetup dwz file fontconfig fontconfig-config
fonts-dejavu-core fonts-gfs-baskerville fonts-gfs-porson fonts-lmodern
fonts-urw-base35 gettext gettext-base ghostscript gnuplot gnuplot-data
gnuplot-qt groff-base gtk-update-icon-cache hicolor-icon-theme
intltool-debian libabsl20220623 libaom3 libapache-pom-java libapparmor1
libarchive-zip-perl libargon2-1 libatk-bridge2.0-0 libatk1.0-0 libatspi2.0-0
libavahi-client3 libavahi-common-data libavahi-common3 libavif15 libbrotli1
libbsd0 libcairo-gobject2 libcairo2 libcolord2 libcommons-logging-java
libcommons-parent-java libcryptsetup12 libcups2 libdatrie1 libdav1d6
libdbus-1-3 libdconf1 libde265-0 libdebhelper-perl libdeflate0
libdevmapper1.02.1 libdouble-conversion3 libdrm-common libdrm2 libedit2
libegl-mesa0 libegl1 libelf1 libepoxy0 libevdev2 libexpat1 libexpat1-dev
libfdisk1 libfile-stripnondeterminism-perl libfontbox-java libfontconfig1
libfontenc1 libfreetype6 libfribidi0 libgav1-1 libgbm1 libgd3
libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libglapi-mesa libgles2
libglib2.0-0 libglvnd0 libgraphite2-3 libgs-common libgs10 libgs10-common
libgtk-3-0 libgtk-3-common libgudev-1.0-0 libharfbuzz0b libheif1 libice6
libicu72 libidn12 libijs-0.35 libinput-bin libinput10 libip4tc2 libjbig0
libjbig2dec0 libjpeg62-turbo libjs-jquery libjs-sphinxdoc libjs-underscore
libjson-c5 libkmod2 libkpathsea6 liblcms2-2 liblerc4 liblua5.4-0
libmagic-mgc libmagic1 libmd0 libmd4c0 libmpdec3 libmtdev1 libnotify4
libopenjp2-7 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0
libpcre2-8-0 libpdfbox-java libpipeline1 libpixman-1-0 libpng16-16
libproc2-0 libptexenc1 libpython3-all-dev libpython3-dev libpython3-stdlib
libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib
libqt5core5a libqt5dbus5 libqt5gui5 libqt5network5 libqt5printsupport5
libqt5svg5 libqt5widgets5 librav1e0 libsimde-dev libsm6 libsub-override-perl
libsvtav1enc1 libsynctex2 libsystemd-shared libsystemd0 libteckit0
libtexlua53-5 libtexluajit2 libthai-data libthai0 libtiff6 libtool
libuchardet0 libudev1 libwacom-common libwacom9 libwayland-client0
libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7
libwxbase3.2-1 libwxgtk3.2-1 libx11-6 libx11-data libx11-xcb1 libx265-199
libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-icccm4 libxcb-image0
libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0
libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1
libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1
libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6
libxinerama1 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxmu6 libxpm4
libxrandr2 libxrender1 libxshmfence1 libxt6 libxtst6 libyuv0 libzzip-0-13 m4
man-db media-types po-debconf poppler-data preview-latex-style procps
python3 python3-all python3-all-dev python3-dev python3-distutils
python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools
python3.11 python3.11-dev python3.11-minimal shared-mime-info systemd
systemd-sysv t1utils tex-common texlive-base texlive-binaries
texlive-font-utils texlive-fonts-recommended texlive-lang-greek
texlive-latex-base texlive-latex-extra texlive-latex-recommended
texlive-pictures texlive-science ucf x11-common xdg-utils xfonts-encodings
xfonts-utils xkb-data zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cython-doc dh-make flit
python3-build python3-tomli python3-installer fonts-freefont-otf
| fonts-freefont-ttf fonts-texgyre gettext-doc libasprintf-dev
libgettextpo-dev gnuplot-doc groff colord libavalon-framework-java
libcommons-logging-java-doc libexcalibur-logkit-java liblog4j1.2-java
cups-common libgd-tools low-memory-monitor gvfs liblcms2-utils
notification-daemon qgnomeplatform-qt5 qt5-image-formats-plugins libtool-doc
gfortran | fortran95-compiler gcj-jdk libwacom-bin m4-doc apparmor less
www-browser libmail-box-perl poppler-utils fonts-japanese-mincho
| fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic
fonts-arphic-ukai fonts-arphic-uming fonts-nanum python3-doc python3-tk
python3-venv python-setuptools-doc python3.11-venv python3.11-doc
binfmt-support systemd-container systemd-homed systemd-userdbd systemd-boot
systemd-resolved libfido2-1 libqrencode4 libtss2-esys-3.0.2-0 libtss2-mu0
libtss2-rc0 polkitd | policykit-1 perl-tk xpdf | pdf-viewer xzdec
lcdf-typetools psutils texlive-fonts-recommended-doc texlive-latex-base-doc
wp2latex python3-pygments icc-profiles libfile-which-perl
texlive-latex-extra-doc texlive-latex-recommended-doc texlive-luatex
texlive-pstricks dot2tex prerex texlive-pictures-doc vprerex
texlive-science-doc
Recommended packages:
librsvg2-common curl | wget | lynx at-spi2-core libarchive-cpio-perl
libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs fonts-droid-fallback
libgtk-3-bin javascript-common qttranslations5-l10n qt5-gtk-platformtheme
qtwayland5 libltdl-dev libmail-sendmail-perl psmisc systemd-timesyncd
| time-daemon libnss-systemd lmodern dvisvgm ps2eps tex-gyre tipa
default-jre libspreadsheet-parseexcel-perl texlive-plain-generic ruby tk
libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
x11-xserver-utils
The following NEW packages will be installed:
adwaita-icon-theme aglfn at-spi2-common autoconf automake autopoint
autotools-dev bsdextrautils cython3 d-shlibs dbus dbus-bin dbus-daemon
dbus-session-bus-common dbus-system-bus-common dbus-user-session
dconf-gsettings-backend dconf-service debhelper dh-autoreconf dh-python
dh-strip-nondeterminism dmsetup dwz file fontconfig fontconfig-config
fonts-dejavu-core fonts-gfs-baskerville fonts-gfs-porson fonts-lmodern
fonts-urw-base35 gettext gettext-base ghostscript gnuplot gnuplot-data
gnuplot-qt groff-base gtk-update-icon-cache hicolor-icon-theme
intltool-debian libabsl20220623 libaom3 libapache-pom-java libapparmor1
libarchive-zip-perl libargon2-1 libatk-bridge2.0-0 libatk1.0-0 libatspi2.0-0
libavahi-client3 libavahi-common-data libavahi-common3 libavif15 libbrotli1
libbsd0 libcairo-gobject2 libcairo2 libcolord2 libcommons-logging-java
libcommons-parent-java libcryptsetup12 libcups2 libdatrie1 libdav1d6
libdbus-1-3 libdconf1 libde265-0 libdebhelper-perl libdeflate0
libdevmapper1.02.1 libdouble-conversion3 libdrm-common libdrm2 libedit2
libegl-mesa0 libegl1 libelf1 libepoxy0 libevdev2 libexpat1 libexpat1-dev
libfdisk1 libfile-stripnondeterminism-perl libfontbox-java libfontconfig1
libfontenc1 libfreetype6 libfribidi0 libgav1-1 libgbm1 libgd3
libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libglapi-mesa libgles2
libglib2.0-0 libglvnd0 libgraphite2-3 libgs-common libgs10 libgs10-common
libgtk-3-0 libgtk-3-common libgudev-1.0-0 libharfbuzz0b libheif1 libice6
libicu72 libidn12 libijs-0.35 libinput-bin libinput10 libip4tc2 libjbig0
libjbig2dec0 libjpeg62-turbo libjs-jquery libjs-sphinxdoc libjs-underscore
libjson-c5 libkmod2 libkpathsea6 liblcms2-2 liblerc4 liblua5.4-0
libmagic-mgc libmagic1 libmd0 libmd4c0 libmpdec3 libmtdev1 libnotify4
libopenjp2-7 libpam-systemd libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0
libpdfbox-java libpipeline1 libpixman-1-0 libpng16-16 libproc2-0 libptexenc1
libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.11
libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libqt5core5a
libqt5dbus5 libqt5gui5 libqt5network5 libqt5printsupport5 libqt5svg5
libqt5widgets5 librav1e0 libsimde-dev libsm6 libsub-override-perl
libsvtav1enc1 libsynctex2 libsystemd-shared libteckit0 libtexlua53-5
libtexluajit2 libthai-data libthai0 libtiff6 libtool libuchardet0
libwacom-common libwacom9 libwayland-client0 libwayland-cursor0
libwayland-egl1 libwayland-server0 libwebp7 libwxbase3.2-1 libwxgtk3.2-1
libx11-6 libx11-data libx11-xcb1 libx265-199 libxau6 libxaw7 libxcb-dri2-0
libxcb-dri3-0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0
libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0
libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0
libxcb-xkb1 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6
libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon-x11-0 libxkbcommon0
libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxshmfence1 libxt6 libxtst6
libyuv0 libzzip-0-13 m4 man-db media-types po-debconf poppler-data
preview-latex-style procps python3 python3-all python3-all-dev python3-dev
python3-distutils python3-lib2to3 python3-minimal python3-pkg-resources
python3-setuptools python3.11 python3.11-dev python3.11-minimal
sbuild-build-depends-minimap2-dummy shared-mime-info systemd systemd-sysv
t1utils tex-common texlive-base texlive-binaries texlive-font-utils
texlive-fonts-recommended texlive-lang-greek texlive-latex-base
texlive-latex-extra texlive-latex-recommended texlive-pictures
texlive-science ucf x11-common xdg-utils xfonts-encodings xfonts-utils
xkb-data zlib1g-dev
The following packages will be upgraded:
libpcre2-8-0 libsystemd0 libudev1
3 upgraded, 273 newly installed, 0 to remove and 87 not upgraded.
Need to get 280 MB of archives.
After this operation, 868 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-wiuOit/apt_archive ./ sbuild-build-depends-minimap2-dummy 0.invalid.0 [956 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf libargon2-1 armhf 0~20171227-0.3 [19.6 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libudev1 armhf 252.4-1+rpi1 [98.2 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf dmsetup armhf 2:1.02.185-2 [81.8 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf libdevmapper1.02.1 armhf 2:1.02.185-2 [123 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf libjson-c5 armhf 0.16-2 [40.0 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libcryptsetup12 armhf 2:2.6.0-2 [190 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libfdisk1 armhf 2.38.1-4 [179 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libkmod2 armhf 30+20221128-1 [49.9 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf libapparmor1 armhf 3.0.8-2 [37.1 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libip4tc2 armhf 1.8.9-2 [17.1 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf libsystemd-shared armhf 252.4-1+rpi1 [1505 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf libsystemd0 armhf 252.4-1+rpi1 [295 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf systemd armhf 252.4-1+rpi1 [2874 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf systemd-sysv armhf 252.4-1+rpi1 [41.0 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf libdbus-1-3 armhf 1.14.4-1 [211 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf dbus-bin armhf 1.14.4-1 [137 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf dbus-session-bus-common all 1.14.4-1 [112 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf dbus-daemon armhf 1.14.4-1 [204 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf dbus-system-bus-common all 1.14.4-1 [113 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf dbus armhf 1.14.4-1 [129 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf poppler-data all 0.4.11-1 [1608 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11-minimal armhf 3.11.1-2 [796 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf python3.11-minimal armhf 3.11.1-2 [1678 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.11.1-2 [25.7 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf media-types all 8.0.0 [33.4 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11-stdlib armhf 3.11.1-2 [1622 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf python3.11 armhf 3.11.1-2 [567 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.11.1-2 [8704 B]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.11.1-2 [25.4 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-8-0 armhf 10.42-1 [225 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-9 [774 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-4 [78.8 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.2-1 [1342 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf libproc2-0 armhf 2:4.0.2-3 [53.6 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf procps armhf 2:4.0.2-3 [679 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.44-3 [95.3 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.44-3 [41.5 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-10 [156 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf libpam-systemd armhf 252.4-1+rpi1 [196 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf libgdk-pixbuf2.0-common all 2.42.10+dfsg-1 [306 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-0 armhf 2.74.5-1 [1204 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1+b1 [571 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf shared-mime-info armhf 2.2-1 [726 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf libjpeg62-turbo armhf 1:2.1.2-1 [144 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf libpng16-16 armhf 1.6.39-2 [258 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libdeflate0 armhf 1.14-1 [50.9 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf libjbig0 armhf 2.1-6.1 [27.0 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf liblerc4 armhf 4.0.0+ds-2 [133 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf libwebp7 armhf 1.2.4-0.1 [242 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libtiff6 armhf 4.5.0-4 [292 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf libgdk-pixbuf-2.0-0 armhf 2.42.10+dfsg-1+b1 [123 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf gtk-update-icon-cache armhf 3.24.36-2 [41.2 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf adwaita-icon-theme all 43-1 [5124 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf aglfn all 1.7+git20191031.4036a9c-2 [30.5 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf at-spi2-common all 2.46.0-5 [162 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-2 [256 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-10 [495 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf cython3 armhf 0.29.32-2+b1 [1507 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf d-shlibs all 0.104 [18.6 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf dbus-user-session armhf 1.14.4-1 [112 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf libdconf1 armhf 0.40.0-4 [36.0 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf dconf-service armhf 0.40.0-4 [28.9 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf dconf-gsettings-backend armhf 0.40.0-4 [23.1 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.11.4 [81.2 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-5 [517 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:82 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:83 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:84 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:85 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-10 [1203 kB]
Get:86 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:87 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:88 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.11.4 [942 kB]
Get:89 http://172.17.4.1/private bookworm-staging/main armhf python3-lib2to3 all 3.10.8-1 [77.3 kB]
Get:90 http://172.17.4.1/private bookworm-staging/main armhf python3-distutils all 3.10.8-1 [139 kB]
Get:91 http://172.17.4.1/private bookworm-staging/main armhf dh-python all 5.20220819+rpi1 [114 kB]
Get:92 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b3 [258 kB]
Get:93 http://172.17.4.1/private bookworm-staging/main armhf libfreetype6 armhf 2.12.1+dfsg-4 [329 kB]
Get:94 http://172.17.4.1/private bookworm-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:95 http://172.17.4.1/private bookworm-staging/main armhf libfontenc1 armhf 1:1.1.4-1 [22.3 kB]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:97 http://172.17.4.1/private bookworm-staging/main armhf xfonts-encodings all 1:1.0.4-2.2 [577 kB]
Get:98 http://172.17.4.1/private bookworm-staging/main armhf xfonts-utils armhf 1:7.7+6 [82.5 kB]
Get:99 http://172.17.4.1/private bookworm-staging/main armhf fonts-urw-base35 all 20200910-7 [10.8 MB]
Get:100 http://172.17.4.1/private bookworm-staging/main armhf fontconfig-config armhf 2.14.1-3 [315 kB]
Get:101 http://172.17.4.1/private bookworm-staging/main armhf libfontconfig1 armhf 2.14.1-3 [366 kB]
Get:102 http://172.17.4.1/private bookworm-staging/main armhf fontconfig armhf 2.14.1-3 [449 kB]
Get:103 http://172.17.4.1/private bookworm-staging/main armhf fonts-gfs-baskerville all 1.1-6 [43.7 kB]
Get:104 http://172.17.4.1/private bookworm-staging/main armhf fonts-gfs-porson all 1.1-7 [33.8 kB]
Get:105 http://172.17.4.1/private bookworm-staging/main armhf fonts-lmodern all 2.005-1 [4540 kB]
Get:106 http://172.17.4.1/private bookworm-staging/main armhf libgs-common all 10.0.0~dfsg-9 [148 kB]
Get:107 http://172.17.4.1/private bookworm-staging/main armhf libgs10-common all 10.0.0~dfsg-9 [586 kB]
Get:108 http://172.17.4.1/private bookworm-staging/main armhf libavahi-common-data armhf 0.8-7 [106 kB]
Get:109 http://172.17.4.1/private bookworm-staging/main armhf libavahi-common3 armhf 0.8-7 [38.2 kB]
Get:110 http://172.17.4.1/private bookworm-staging/main armhf libavahi-client3 armhf 0.8-7 [40.8 kB]
Get:111 http://172.17.4.1/private bookworm-staging/main armhf libcups2 armhf 2.4.2-1+b1 [311 kB]
Get:112 http://172.17.4.1/private bookworm-staging/main armhf libidn12 armhf 1.41-1 [80.8 kB]
Get:113 http://172.17.4.1/private bookworm-staging/main armhf libijs-0.35 armhf 0.35-15 [14.7 kB]
Get:114 http://172.17.4.1/private bookworm-staging/main armhf libjbig2dec0 armhf 0.19-3+b2 [58.6 kB]
Get:115 http://172.17.4.1/private bookworm-staging/main armhf liblcms2-2 armhf 2.14-1+b1 [124 kB]
Get:116 http://172.17.4.1/private bookworm-staging/main armhf libopenjp2-7 armhf 2.5.0-1+b1 [164 kB]
Get:117 http://172.17.4.1/private bookworm-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:118 http://172.17.4.1/private bookworm-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:119 http://172.17.4.1/private bookworm-staging/main armhf libmd0 armhf 1.0.4-2 [28.6 kB]
Get:120 http://172.17.4.1/private bookworm-staging/main armhf libbsd0 armhf 0.11.7-1 [112 kB]
Get:121 http://172.17.4.1/private bookworm-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:122 http://172.17.4.1/private bookworm-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:123 http://172.17.4.1/private bookworm-staging/main armhf libx11-data all 2:1.8.3-3 [292 kB]
Get:124 http://172.17.4.1/private bookworm-staging/main armhf libx11-6 armhf 2:1.8.3-3 [687 kB]
Get:125 http://172.17.4.1/private bookworm-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:126 http://172.17.4.1/private bookworm-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:127 http://172.17.4.1/private bookworm-staging/main armhf libxt6 armhf 1:1.2.1-1 [159 kB]
Get:128 http://172.17.4.1/private bookworm-staging/main armhf libgs10 armhf 10.0.0~dfsg-9+b1 [2050 kB]
Get:129 http://172.17.4.1/private bookworm-staging/main armhf ghostscript armhf 10.0.0~dfsg-9+b1 [56.7 kB]
Get:130 http://172.17.4.1/private bookworm-staging/main armhf gnuplot-data all 5.4.4+dfsg1-2 [72.1 kB]
Get:131 http://172.17.4.1/private bookworm-staging/main armhf libpixman-1-0 armhf 0.42.2-1 [461 kB]
Get:132 http://172.17.4.1/private bookworm-staging/main armhf libxcb-render0 armhf 1.15-1 [114 kB]
Get:133 http://172.17.4.1/private bookworm-staging/main armhf libxcb-shm0 armhf 1.15-1 [106 kB]
Get:134 http://172.17.4.1/private bookworm-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:135 http://172.17.4.1/private bookworm-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:136 http://172.17.4.1/private bookworm-staging/main armhf libcairo2 armhf 1.16.0-7 [482 kB]
Get:137 http://172.17.4.1/private bookworm-staging/main armhf libedit2 armhf 3.1-20221030-2 [76.2 kB]
Get:138 http://172.17.4.1/private bookworm-staging/main armhf libaom3 armhf 3.5.0-1 [1302 kB]
Get:139 http://172.17.4.1/private bookworm-staging/main armhf libdav1d6 armhf 1.0.0-2+rpi1 [205 kB]
Get:140 http://172.17.4.1/private bookworm-staging/main armhf libabsl20220623 armhf 20220623.1-1+rpi1 [361 kB]
Get:141 http://172.17.4.1/private bookworm-staging/main armhf libgav1-1 armhf 0.18.0-1+rpi1+b1 [285 kB]
Get:142 http://172.17.4.1/private bookworm-staging/main armhf librav1e0 armhf 0.5.1-6 [521 kB]
Get:143 http://172.17.4.1/private bookworm-staging/main armhf libsvtav1enc1 armhf 1.4.1+dfsg-1 [880 kB]
Get:144 http://172.17.4.1/private bookworm-staging/main armhf libyuv0 armhf 0.0~git20230104.6e4b0ac-1 [82.2 kB]
Get:145 http://172.17.4.1/private bookworm-staging/main armhf libavif15 armhf 0.11.1-1 [84.1 kB]
Get:146 http://172.17.4.1/private bookworm-staging/main armhf libde265-0 armhf 1.0.9-1.1+rpi1 [189 kB]
Get:147 http://172.17.4.1/private bookworm-staging/main armhf libx265-199 armhf 3.5-2 [548 kB]
Get:148 http://172.17.4.1/private bookworm-staging/main armhf libheif1 armhf 1.14.2-1 [174 kB]
Get:149 http://172.17.4.1/private bookworm-staging/main armhf libxpm4 armhf 1:3.5.12-1.1 [42.0 kB]
Get:150 http://172.17.4.1/private bookworm-staging/main armhf libgd3 armhf 2.3.3-7+b1 [102 kB]
Get:151 http://172.17.4.1/private bookworm-staging/main armhf liblua5.4-0 armhf 5.4.4-3 [110 kB]
Get:152 http://172.17.4.1/private bookworm-staging/main armhf libfribidi0 armhf 1.0.8-2.1 [63.7 kB]
Get:153 http://172.17.4.1/private bookworm-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:154 http://172.17.4.1/private bookworm-staging/main armhf libharfbuzz0b armhf 6.0.0-1 [1886 kB]
Get:155 http://172.17.4.1/private bookworm-staging/main armhf libthai-data all 0.1.29-1 [176 kB]
Get:156 http://172.17.4.1/private bookworm-staging/main armhf libdatrie1 armhf 0.2.13-2+b2 [39.9 kB]
Get:157 http://172.17.4.1/private bookworm-staging/main armhf libthai0 armhf 0.1.29-1 [54.5 kB]
Get:158 http://172.17.4.1/private bookworm-staging/main armhf libpango-1.0-0 armhf 1.50.12+ds-1 [186 kB]
Get:159 http://172.17.4.1/private bookworm-staging/main armhf libpangoft2-1.0-0 armhf 1.50.12+ds-1 [40.5 kB]
Get:160 http://172.17.4.1/private bookworm-staging/main armhf libpangocairo-1.0-0 armhf 1.50.12+ds-1 [30.1 kB]
Get:161 http://172.17.4.1/private bookworm-staging/main armhf libdouble-conversion3 armhf 3.2.1-1 [38.8 kB]
Get:162 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-16-0 armhf 10.42-1 [210 kB]
Get:163 http://172.17.4.1/private bookworm-staging/main armhf libqt5core5a armhf 5.15.8+dfsg-2+rpi1 [1497 kB]
Get:164 http://172.17.4.1/private bookworm-staging/main armhf libdrm-common all 2.4.114-1+rpi1 [7276 B]
Get:165 http://172.17.4.1/private bookworm-staging/main armhf libdrm2 armhf 2.4.114-1+rpi1 [32.8 kB]
Get:166 http://172.17.4.1/private bookworm-staging/main armhf libglvnd0 armhf 1.6.0-1 [53.8 kB]
Get:167 http://172.17.4.1/private bookworm-staging/main armhf libwayland-server0 armhf 1.21.0-1 [29.3 kB]
Get:168 http://172.17.4.1/private bookworm-staging/main armhf libgbm1 armhf 22.2.0-1+rpi1 [74.8 kB]
Get:169 http://172.17.4.1/private bookworm-staging/main armhf libglapi-mesa armhf 22.2.0-1+rpi1 [84.6 kB]
Get:170 http://172.17.4.1/private bookworm-staging/main armhf libwayland-client0 armhf 1.21.0-1 [23.3 kB]
Get:171 http://172.17.4.1/private bookworm-staging/main armhf libx11-xcb1 armhf 2:1.8.3-3 [192 kB]
Get:172 http://172.17.4.1/private bookworm-staging/main armhf libxcb-dri2-0 armhf 1.15-1 [107 kB]
Get:173 http://172.17.4.1/private bookworm-staging/main armhf libxcb-dri3-0 armhf 1.15-1 [107 kB]
Get:174 http://172.17.4.1/private bookworm-staging/main armhf libxcb-present0 armhf 1.15-1 [105 kB]
Get:175 http://172.17.4.1/private bookworm-staging/main armhf libxcb-sync1 armhf 1.15-1 [108 kB]
Get:176 http://172.17.4.1/private bookworm-staging/main armhf libxcb-xfixes0 armhf 1.15-1 [109 kB]
Get:177 http://172.17.4.1/private bookworm-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:178 http://172.17.4.1/private bookworm-staging/main armhf libegl-mesa0 armhf 22.2.0-1+rpi1 [129 kB]
Get:179 http://172.17.4.1/private bookworm-staging/main armhf libegl1 armhf 1.6.0-1 [28.3 kB]
Get:180 http://172.17.4.1/private bookworm-staging/main armhf libgles2 armhf 1.6.0-1 [17.2 kB]
Get:181 http://172.17.4.1/private bookworm-staging/main armhf libevdev2 armhf 1.13.0+dfsg-1+rpi1 [27.9 kB]
Get:182 http://172.17.4.1/private bookworm-staging/main armhf libmtdev1 armhf 1.1.6-1 [22.0 kB]
Get:183 http://172.17.4.1/private bookworm-staging/main armhf libgudev-1.0-0 armhf 237-2 [13.2 kB]
Get:184 http://172.17.4.1/private bookworm-staging/main armhf libwacom-common all 2.5.0-1 [57.4 kB]
Get:185 http://172.17.4.1/private bookworm-staging/main armhf libwacom9 armhf 2.5.0-1 [18.6 kB]
Get:186 http://172.17.4.1/private bookworm-staging/main armhf libinput-bin armhf 1.22.1-1 [21.7 kB]
Get:187 http://172.17.4.1/private bookworm-staging/main armhf libinput10 armhf 1.22.1-1 [106 kB]
Get:188 http://172.17.4.1/private bookworm-staging/main armhf libmd4c0 armhf 0.4.8-1 [39.4 kB]
Get:189 http://172.17.4.1/private bookworm-staging/main armhf libqt5dbus5 armhf 5.15.8+dfsg-2+rpi1 [181 kB]
Get:190 http://172.17.4.1/private bookworm-staging/main armhf libqt5network5 armhf 5.15.8+dfsg-2+rpi1 [571 kB]
Get:191 http://172.17.4.1/private bookworm-staging/main armhf libxcb-icccm4 armhf 0.4.1-1.1 [26.3 kB]
Get:192 http://172.17.4.1/private bookworm-staging/main armhf libxcb-util1 armhf 0.4.0-1 [22.1 kB]
Get:193 http://172.17.4.1/private bookworm-staging/main armhf libxcb-image0 armhf 0.4.0-2 [21.9 kB]
Get:194 http://172.17.4.1/private bookworm-staging/main armhf libxcb-keysyms1 armhf 0.4.0-1+b2 [15.9 kB]
Get:195 http://172.17.4.1/private bookworm-staging/main armhf libxcb-randr0 armhf 1.15-1 [116 kB]
Get:196 http://172.17.4.1/private bookworm-staging/main armhf libxcb-render-util0 armhf 0.3.9-1+b1 [17.3 kB]
Get:197 http://172.17.4.1/private bookworm-staging/main armhf libxcb-shape0 armhf 1.15-1 [106 kB]
Get:198 http://172.17.4.1/private bookworm-staging/main armhf libxcb-xinerama0 armhf 1.15-1 [105 kB]
Get:199 http://172.17.4.1/private bookworm-staging/main armhf libxcb-xinput0 armhf 1.15-1 [127 kB]
Get:200 http://172.17.4.1/private bookworm-staging/main armhf libxcb-xkb1 armhf 1.15-1 [126 kB]
Get:201 http://172.17.4.1/private bookworm-staging/main armhf xkb-data all 2.35.1-1 [764 kB]
Get:202 http://172.17.4.1/private bookworm-staging/main armhf libxkbcommon0 armhf 1.5.0-1 [93.1 kB]
Get:203 http://172.17.4.1/private bookworm-staging/main armhf libxkbcommon-x11-0 armhf 1.5.0-1 [13.8 kB]
Get:204 http://172.17.4.1/private bookworm-staging/main armhf libqt5gui5 armhf 5.15.8+dfsg-2+rpi1 [2548 kB]
Get:205 http://172.17.4.1/private bookworm-staging/main armhf libqt5widgets5 armhf 5.15.8+dfsg-2+rpi1 [2037 kB]
Get:206 http://172.17.4.1/private bookworm-staging/main armhf libqt5printsupport5 armhf 5.15.8+dfsg-2+rpi1 [180 kB]
Get:207 http://172.17.4.1/private bookworm-staging/main armhf libqt5svg5 armhf 5.15.8-2 [114 kB]
Get:208 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-32-0 armhf 10.42-1 [201 kB]
Get:209 http://172.17.4.1/private bookworm-staging/main armhf libwxbase3.2-1 armhf 3.2.1+dfsg-4+b1 [819 kB]
Get:210 http://172.17.4.1/private bookworm-staging/main armhf libatk1.0-0 armhf 2.46.0-4 [41.4 kB]
Get:211 http://172.17.4.1/private bookworm-staging/main armhf libxi6 armhf 2:1.8-1 [78.1 kB]
Get:212 http://172.17.4.1/private bookworm-staging/main armhf libatspi2.0-0 armhf 2.46.0-4 [63.8 kB]
Get:213 http://172.17.4.1/private bookworm-staging/main armhf libatk-bridge2.0-0 armhf 2.46.0-4 [55.4 kB]
Get:214 http://172.17.4.1/private bookworm-staging/main armhf libcairo-gobject2 armhf 1.16.0-7 [111 kB]
Get:215 http://172.17.4.1/private bookworm-staging/main armhf libcolord2 armhf 1.4.6-2.1 [117 kB]
Get:216 http://172.17.4.1/private bookworm-staging/main armhf libepoxy0 armhf 1.5.10-1 [172 kB]
Get:217 http://172.17.4.1/private bookworm-staging/main armhf libwayland-cursor0 armhf 1.21.0-1 [13.2 kB]
Get:218 http://172.17.4.1/private bookworm-staging/main armhf libwayland-egl1 armhf 1.21.0-1 [8448 B]
Get:219 http://172.17.4.1/private bookworm-staging/main armhf libxcomposite1 armhf 1:0.4.5-1 [16.2 kB]
Get:220 http://172.17.4.1/private bookworm-staging/main armhf libxfixes3 armhf 1:6.0.0-2 [21.2 kB]
Get:221 http://172.17.4.1/private bookworm-staging/main armhf libxcursor1 armhf 1:1.2.1-1 [38.0 kB]
Get:222 http://172.17.4.1/private bookworm-staging/main armhf libxdamage1 armhf 1:1.1.6-1 [14.7 kB]
Get:223 http://172.17.4.1/private bookworm-staging/main armhf libxinerama1 armhf 2:1.1.4-3 [17.4 kB]
Get:224 http://172.17.4.1/private bookworm-staging/main armhf libxrandr2 armhf 2:1.5.2-2 [35.5 kB]
Get:225 http://172.17.4.1/private bookworm-staging/main armhf libgtk-3-common all 3.24.36-2 [3880 kB]
Get:226 http://172.17.4.1/private bookworm-staging/main armhf libgtk-3-0 armhf 3.24.36-2 [2352 kB]
Get:227 http://172.17.4.1/private bookworm-staging/main armhf libnotify4 armhf 0.8.1-1 [27.5 kB]
Get:228 http://172.17.4.1/private bookworm-staging/main armhf libxtst6 armhf 2:1.2.3-1.1 [26.3 kB]
Get:229 http://172.17.4.1/private bookworm-staging/main armhf libwxgtk3.2-1 armhf 3.2.1+dfsg-4+b1 [3752 kB]
Get:230 http://172.17.4.1/private bookworm-staging/main armhf gnuplot-qt armhf 5.4.4+dfsg1-2+b1 [899 kB]
Get:231 http://172.17.4.1/private bookworm-staging/main armhf gnuplot all 5.4.4+dfsg1-2 [5844 B]
Get:232 http://172.17.4.1/private bookworm-staging/main armhf libapache-pom-java all 29-2 [5276 B]
Get:233 http://172.17.4.1/private bookworm-staging/main armhf libcommons-parent-java all 56-1 [10.8 kB]
Get:234 http://172.17.4.1/private bookworm-staging/main armhf libcommons-logging-java all 1.2-3 [62.4 kB]
Get:235 http://172.17.4.1/private bookworm-staging/main armhf libexpat1-dev armhf 2.5.0-1 [130 kB]
Get:236 http://172.17.4.1/private bookworm-staging/main armhf libfontbox-java all 1:1.8.16-2 [211 kB]
Get:237 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:238 http://172.17.4.1/private bookworm-staging/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:239 http://172.17.4.1/private bookworm-staging/main armhf libjs-sphinxdoc all 5.3.0-3 [130 kB]
Get:240 http://172.17.4.1/private bookworm-staging/main armhf libkpathsea6 armhf 2022.20220321.62855-5 [142 kB]
Get:241 http://172.17.4.1/private bookworm-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:242 http://172.17.4.1/private bookworm-staging/main armhf libpdfbox-java all 1:1.8.16-2 [5205 kB]
Get:243 http://172.17.4.1/private bookworm-staging/main armhf libptexenc1 armhf 2022.20220321.62855-5 [40.1 kB]
Get:244 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11 armhf 3.11.1-2 [1666 kB]
Get:245 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-1 [901 kB]
Get:246 http://172.17.4.1/private bookworm-staging/main armhf libpython3.11-dev armhf 3.11.1-2 [3375 kB]
Get:247 http://172.17.4.1/private bookworm-staging/main armhf libpython3-dev armhf 3.11.1-2 [8936 B]
Get:248 http://172.17.4.1/private bookworm-staging/main armhf libpython3-all-dev armhf 3.11.1-2 [1068 B]
Get:249 http://172.17.4.1/private bookworm-staging/main armhf libsimde-dev all 0.7.2-6 [259 kB]
Get:250 http://172.17.4.1/private bookworm-staging/main armhf libsynctex2 armhf 2022.20220321.62855-5 [46.3 kB]
Get:251 http://172.17.4.1/private bookworm-staging/main armhf libteckit0 armhf 2.5.11+ds1-1 [256 kB]
Get:252 http://172.17.4.1/private bookworm-staging/main armhf libtexlua53-5 armhf 2022.20220321.62855-5 [81.3 kB]
Get:253 http://172.17.4.1/private bookworm-staging/main armhf libtexluajit2 armhf 2022.20220321.62855-5 [187 kB]
Get:254 http://172.17.4.1/private bookworm-staging/main armhf libxmu6 armhf 2:1.1.3-3 [52.0 kB]
Get:255 http://172.17.4.1/private bookworm-staging/main armhf libxaw7 armhf 2:1.0.14-1 [165 kB]
Get:256 http://172.17.4.1/private bookworm-staging/main armhf libzzip-0-13 armhf 0.13.72+dfsg.1-1.1 [54.3 kB]
Get:257 http://172.17.4.1/private bookworm-staging/main armhf tex-common all 6.18 [32.5 kB]
Get:258 http://172.17.4.1/private bookworm-staging/main armhf preview-latex-style all 12.2-1 [201 kB]
Get:259 http://172.17.4.1/private bookworm-staging/main armhf python3-all armhf 3.11.1-2 [1064 B]
Get:260 http://172.17.4.1/private bookworm-staging/main armhf python3.11-dev armhf 3.11.1-2 [618 kB]
Get:261 http://172.17.4.1/private bookworm-staging/main armhf python3-dev armhf 3.11.1-2 [26.2 kB]
Get:262 http://172.17.4.1/private bookworm-staging/main armhf python3-all-dev armhf 3.11.1-2 [1064 B]
Get:263 http://172.17.4.1/private bookworm-staging/main armhf python3-pkg-resources all 65.6.3-1 [278 kB]
Get:264 http://172.17.4.1/private bookworm-staging/main armhf python3-setuptools all 65.6.3-1 [520 kB]
Get:265 http://172.17.4.1/private bookworm-staging/main armhf t1utils armhf 1.41-4 [52.3 kB]
Get:266 http://172.17.4.1/private bookworm-staging/main armhf texlive-binaries armhf 2022.20220321.62855-5 [7474 kB]
Get:267 http://172.17.4.1/private bookworm-staging/main armhf xdg-utils all 1.1.3-4.1 [75.5 kB]
Get:268 http://172.17.4.1/private bookworm-staging/main armhf texlive-base all 2022.20221123-1 [21.9 MB]
Get:269 http://172.17.4.1/private bookworm-staging/main armhf texlive-font-utils all 2022.20221123-2 [4128 kB]
Get:270 http://172.17.4.1/private bookworm-staging/main armhf texlive-fonts-recommended all 2022.20221123-1 [4988 kB]
Get:271 http://172.17.4.1/private bookworm-staging/main armhf texlive-lang-greek all 2022.20221123-1 [78.1 MB]
Get:272 http://172.17.4.1/private bookworm-staging/main armhf texlive-latex-base all 2022.20221123-1 [1175 kB]
Get:273 http://172.17.4.1/private bookworm-staging/main armhf texlive-latex-recommended all 2022.20221123-1 [8882 kB]
Get:274 http://172.17.4.1/private bookworm-staging/main armhf texlive-pictures all 2022.20221123-1 [15.8 MB]
Get:275 http://172.17.4.1/private bookworm-staging/main armhf texlive-latex-extra all 2022.20221123-2 [19.2 MB]
Get:276 http://172.17.4.1/private bookworm-staging/main armhf texlive-science all 2022.20221123-2 [3711 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up systemd (252.4-1+rpi1) ...
Created symlink /etc/systemd/system/getty.target.wants/getty@tty1.service -> /lib/systemd/system/getty@.service.
Created symlink /etc/systemd/system/multi-user.target.wants/remote-fs.target -> /lib/systemd/system/remote-fs.target.
Created symlink /etc/systemd/system/sysinit.target.wants/systemd-pstore.service -> /lib/systemd/system/systemd-pstore.service.
Initializing machine ID from random generator.
Creating group 'systemd-journal' with GID 999.
Creating user '_apt' (n/a) with UID 42 and GID 65534.
Creating group 'systemd-network' with GID 998.
Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998.
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Setting up libglapi-mesa:armhf (22.2.0-1+rpi1) ...
Setting up libkpathsea6:armhf (2022.20220321.62855-5) ...
Setting up libmtdev1:armhf (1.1.6-1) ...
Setting up autoconf (2.71-3) ...
Setting up libx265-199:armhf (3.5-2) ...
Setting up libwebp7:armhf (1.2.4-0.1) ...
Setting up zlib1g-dev:armhf (1:1.2.13.dfsg-1) ...
Setting up libmd0:armhf (1.0.4-2) ...
Setting up fonts-gfs-baskerville (1.1-6) ...
Setting up libxshmfence1:armhf (1.3-1) ...
Setting up at-spi2-common (2.46.0-5) ...
Setting up libtiff6:armhf (4.5.0-4) ...
Setting up dbus-session-bus-common (1.14.4-1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up procps (2:4.0.2-3) ...
Setting up libmpdec3:armhf (2.5.1-2+rpi1) ...
Setting up libmd4c0:armhf (0.4.8-1) ...
Setting up fonts-lmodern (2.005-1) ...
Setting up liblua5.4-0:armhf (5.4.4-3) ...
Setting up libopenjp2-7:armhf (2.5.0-1+b1) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libthai-data (0.1.29-1) ...
Setting up libatk1.0-0:armhf (2.46.0-4) ...
Setting up libwayland-egl1:armhf (1.21.0-1) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up dbus-system-bus-common (1.14.4-1) ...
Setting up libde265-0:armhf (1.0.9-1.1+rpi1) ...
Setting up libbsd0:armhf (0.11.7-1) ...
Setting up libdrm-common (2.4.114-1+rpi1) ...
Setting up libyuv0:armhf (0.0~git20230104.6e4b0ac-1) ...
Setting up libelf1:armhf (0.187-2+rpi2) ...
Setting up libevdev2:armhf (1.13.0+dfsg-1+rpi1) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.1+b1) ...
Setting up xdg-utils (1.1.3-4.1) ...
update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
Setting up dbus-bin (1.14.4-1) ...
Setting up libgudev-1.0-0:armhf (237-2) ...
Setting up libsynctex2:armhf (2022.20220321.62855-5) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Setting up libwacom-common (2.5.0-1) ...
Setting up libxkbcommon0:armhf (1.5.0-1) ...
Setting up libwayland-client0:armhf (1.21.0-1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up gnuplot-data (5.4.4+dfsg1-2) ...
Setting up libpaper1:armhf (1.1.28) ...
Creating config file /etc/papersize with new version
Setting up libice6:armhf (2:1.0.10-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libxcb1:armhf (1.15-1) ...
Setting up gettext (0.21-10) ...
Setting up libxcb-xfixes0:armhf (1.15-1) ...
Setting up libpdfbox-java (1:1.8.16-2) ...
Setting up libavif15:armhf (0.11.1-1) ...
Setting up libxcb-xinput0:armhf (1.15-1) ...
Setting up libtool (2.4.7-5) ...
Setting up libxcb-render0:armhf (1.15-1) ...
Setting up libwacom9:armhf (2.5.0-1) ...
Setting up fontconfig-config (2.14.1-3) ...
Setting up libpython3.11-stdlib:armhf (3.11.1-2) ...
Setting up libedit2:armhf (3.1-20221030-2) ...
Setting up libheif1:armhf (1.14.2-1) ...
Setting up libcommons-parent-java (56-1) ...
Setting up libxcb-keysyms1:armhf (0.4.0-1+b2) ...
Setting up libxcb-shape0:armhf (1.15-1) ...
Setting up libavahi-common3:armhf (0.8-7) ...
Setting up libcommons-logging-java (1.2-3) ...
Setting up libxcb-render-util0:armhf (0.3.9-1+b1) ...
Setting up libxcb-shm0:armhf (1.15-1) ...
Setting up libxcb-icccm4:armhf (0.4.1-1.1) ...
Setting up dbus-daemon (1.14.4-1) ...
Setting up libpaper-utils (1.1.28) ...
Setting up libwxbase3.2-1:armhf (3.2.1+dfsg-4+b1) ...
Setting up libxcb-util1:armhf (0.4.0-1) ...
Setting up libinput-bin (1.22.1-1) ...
Setting up libxcb-xkb1:armhf (1.15-1) ...
Setting up libxcb-image0:armhf (0.4.0-2) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up libxcb-present0:armhf (1.15-1) ...
Setting up dh-autoreconf (20) ...
Setting up tex-common (6.18) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up libthai0:armhf (0.1.29-1) ...
Setting up libxcb-xinerama0:armhf (1.15-1) ...
Setting up libptexenc1:armhf (2022.20220321.62855-5) ...
Setting up libfreetype6:armhf (2.12.1+dfsg-4) ...
Setting up libxcb-sync1:armhf (1.15-1) ...
Setting up dbus (1.14.4-1) ...
Running in chroot, ignoring request.
Setting up shared-mime-info (2.2-1) ...
Setting up libxkbcommon-x11-0:armhf (1.5.0-1) ...
Setting up libqt5core5a:armhf (5.15.8+dfsg-2+rpi1) ...
Setting up libjs-sphinxdoc (5.3.0-3) ...
Setting up libxcb-dri2-0:armhf (1.15-1) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up libdrm2:armhf (2.4.114-1+rpi1) ...
Setting up dwz (0.15-1) ...
Setting up groff-base (1.22.4-9) ...
Setting up libqt5dbus5:armhf (5.15.8+dfsg-2+rpi1) ...
Setting up libwayland-cursor0:armhf (1.21.0-1) ...
Setting up libxcb-randr0:armhf (1.15-1) ...
Setting up libpam-systemd:armhf (252.4-1+rpi1) ...
Setting up libx11-6:armhf (2:1.8.3-3) ...
Setting up libharfbuzz0b:armhf (6.0.0-1) ...
Setting up libgdk-pixbuf-2.0-0:armhf (2.42.10+dfsg-1+b1) ...
Setting up libxcomposite1:armhf (1:0.4.5-1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libavahi-client3:armhf (0.8-7) ...
Setting up libpython3-stdlib:armhf (3.11.1-2) ...
Setting up libxcb-dri3-0:armhf (1.15-1) ...
Setting up libinput10:armhf (1.22.1-1) ...
Setting up gtk-update-icon-cache (3.24.36-2) ...
Setting up libx11-xcb1:armhf (2:1.8.3-3) ...
Setting up python3.11 (3.11.1-2) ...
Setting up libxdamage1:armhf (1:1.1.6-1) ...
Setting up libpython3.11:armhf (3.11.1-2) ...
Setting up libxpm4:armhf (1:3.5.12-1.1) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up libgbm1:armhf (22.2.0-1+rpi1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up preview-latex-style (12.2-1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up python3 (3.11.1-2) ...
Setting up xfonts-utils (1:7.7+6) ...
Setting up man-db (2.11.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink /etc/systemd/system/timers.target.wants/man-db.timer -> /lib/systemd/system/man-db.timer.
Setting up libqt5network5:armhf (5.15.8+dfsg-2+rpi1) ...
Setting up dbus-user-session (1.14.4-1) ...
Setting up libegl-mesa0:armhf (22.2.0-1+rpi1) ...
Setting up adwaita-icon-theme (43-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up libxfixes3:armhf (1:6.0.0-2) ...
Setting up libpython3.11-dev:armhf (3.11.1-2) ...
Setting up libnotify4:armhf (0.8.1-1) ...
Setting up libxinerama1:armhf (2:1.1.4-3) ...
Setting up libxrandr2:armhf (2:1.5.2-2) ...
Setting up cython3 (0.29.32-2+b1) ...
Setting up libxt6:armhf (1:1.2.1-1) ...
Setting up libcups2:armhf (2.4.2-1+b1) ...
Setting up libegl1:armhf (1.6.0-1) ...
Setting up python3-lib2to3 (3.10.8-1) ...
Setting up python3-pkg-resources (65.6.3-1) ...
Setting up python3-distutils (3.10.8-1) ...
Setting up dh-python (5.20220819+rpi1) ...
Setting up libxmu6:armhf (2:1.1.3-3) ...
Setting up libpython3-dev:armhf (3.11.1-2) ...
Setting up python3-setuptools (65.6.3-1) ...
Setting up libxi6:armhf (2:1.8-1) ...
Setting up python3.11-dev (3.11.1-2) ...
Setting up libxtst6:armhf (2:1.2.3-1.1) ...
Setting up libxcursor1:armhf (1:1.2.1-1) ...
Setting up python3-all (3.11.1-2) ...
Setting up debhelper (13.11.4) ...
Setting up dconf-service (0.40.0-4) ...
Setting up libxaw7:armhf (2:1.0.14-1) ...
Setting up libatspi2.0-0:armhf (2.46.0-4) ...
Setting up fonts-urw-base35 (20200910-7) ...
Setting up libatk-bridge2.0-0:armhf (2.46.0-4) ...
Setting up libpython3-all-dev:armhf (3.11.1-2) ...
Setting up python3-dev (3.11.1-2) ...
Setting up python3-all-dev (3.11.1-2) ...
Setting up libgs10-common (10.0.0~dfsg-9) ...
Setting up dconf-gsettings-backend:armhf (0.40.0-4) ...
Setting up libgtk-3-common (3.24.36-2) ...
Processing triggers for libc-bin (2.36-6+rpi1) ...
Processing triggers for systemd (252.4-1+rpi1) ...
Processing triggers for sgml-base (1.31) ...
Setting up libfontconfig1:armhf (2.14.1-3) ...
Setting up libgs10:armhf (10.0.0~dfsg-9+b1) ...
Setting up fontconfig (2.14.1-3) ...
Regenerating fonts cache... done.
Setting up libpango-1.0-0:armhf (1.50.12+ds-1) ...
Setting up libqt5gui5:armhf (5.15.8+dfsg-2+rpi1) ...
Setting up libqt5widgets5:armhf (5.15.8+dfsg-2+rpi1) ...
Setting up ghostscript (10.0.0~dfsg-9+b1) ...
Setting up libcairo2:armhf (1.16.0-7) ...
Setting up libqt5printsupport5:armhf (5.15.8+dfsg-2+rpi1) ...
Setting up libgd3:armhf (2.3.3-7+b1) ...
Setting up texlive-binaries (2022.20220321.62855-5) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libcairo-gobject2:armhf (1.16.0-7) ...
Setting up libpangoft2-1.0-0:armhf (1.50.12+ds-1) ...
Setting up texlive-base (2022.20221123-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
Setting up libpangocairo-1.0-0:armhf (1.50.12+ds-1) ...
Setting up libgtk-3-0:armhf (3.24.36-2) ...
Setting up libqt5svg5:armhf (5.15.8-2) ...
Setting up texlive-lang-greek (2022.20221123-1) ...
Setting up texlive-font-utils (2022.20221123-2) ...
Setting up texlive-latex-base (2022.20221123-1) ...
Setting up texlive-latex-recommended (2022.20221123-1) ...
Setting up texlive-pictures (2022.20221123-1) ...
Setting up texlive-fonts-recommended (2022.20221123-1) ...
Setting up libwxgtk3.2-1:armhf (3.2.1+dfsg-4+b1) ...
Setting up texlive-science (2022.20221123-2) ...
Setting up texlive-latex-extra (2022.20221123-2) ...
Setting up gnuplot-qt (5.4.4+dfsg1-2+b1) ...
update-alternatives: using /usr/bin/gnuplot-qt to provide /usr/bin/gnuplot (gnuplot) in auto mode
Setting up gnuplot (5.4.4+dfsg1-2) ...
Setting up sbuild-build-depends-minimap2-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.36-6+rpi1) ...
Processing triggers for tex-common (6.18) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
This may take some time... done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.39.50.20221208-5+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-10+rpi1 gcc-12_12.2.0-10+rpi1 libc6-dev_2.36-6+rpi1 libstdc++-12-dev_12.2.0-10+rpi1 libstdc++6_12.2.0-10+rpi1 linux-libc-dev_6.0.12-1+rpi1
Package versions: adduser_3.129 adwaita-icon-theme_43-1 aglfn_1.7+git20191031.4036a9c-2 apt_2.5.4 at-spi2-common_2.46.0-5 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2-2 binutils_2.39.50.20221208-5+rpi1 binutils-arm-linux-gnueabihf_2.39.50.20221208-5+rpi1 binutils-common_2.39.50.20221208-5+rpi1 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b2 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-10+rpi1 cython3_0.29.32-2+b1 d-shlibs_0.104 dash_0.5.11+git20210903+057cd650a4ed-9 dbus_1.14.4-1 dbus-bin_1.14.4-1 dbus-daemon_1.14.4-1 dbus-session-bus-common_1.14.4-1 dbus-system-bus-common_1.14.4-1 dbus-user-session_1.14.4-1 dconf-gsettings-backend_0.40.0-4 dconf-service_0.40.0-4 debconf_1.5.80 debhelper_13.11.4 debianutils_5.7-0.4 dh-autoreconf_20 dh-python_5.20220819+rpi1 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-1 dirmngr_2.2.40-1 dmsetup_2:1.02.185-2 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.15-1 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 file_1:5.44-3 findutils_4.9.0-3 fontconfig_2.14.1-3 fontconfig-config_2.14.1-3 fonts-dejavu-core_2.37-2 fonts-gfs-baskerville_1.1-6 fonts-gfs-porson_1.1-7 fonts-lmodern_2.005-1 fonts-urw-base35_20200910-7 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-10+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-10+rpi1 gcc-12-base_12.2.0-10+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-10 gettext-base_0.21-10 ghostscript_10.0.0~dfsg-9+b1 gnupg_2.2.40-1 gnupg-l10n_2.2.40-1 gnupg-utils_2.2.40-1 gnuplot_5.4.4+dfsg1-2 gnuplot-data_5.4.4+dfsg1-2 gnuplot-qt_5.4.4+dfsg1-2+b1 gpg_2.2.40-1 gpg-agent_2.2.40-1 gpg-wks-client_2.2.40-1 gpg-wks-server_2.2.40-1 gpgconf_2.2.40-1 gpgsm_2.2.40-1 gpgv_2.2.40-1 grep_3.8-3 groff-base_1.22.4-9 gtk-update-icon-cache_3.24.36-2 gzip_1.12-1 hicolor-icon-theme_0.17-2 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20221126-1 krb5-locales_1.20.1-1 libabsl20220623_20220623.1-1+rpi1 libacl1_2.3.1-2 libaom3_3.5.0-1 libapache-pom-java_29-2 libapparmor1_3.0.8-2 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.3 libasan8_12.2.0-10+rpi1 libassuan0_2.5.5-5 libatk-bridge2.0-0_2.46.0-4 libatk1.0-0_2.46.0-4 libatomic1_12.2.0-10+rpi1 libatspi2.0-0_2.46.0-4 libattr1_1:2.5.1-3 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1 libavahi-client3_0.8-7 libavahi-common-data_0.8-7 libavahi-common3_0.8-7 libavif15_0.11.1-1 libbinutils_2.39.50.20221208-5+rpi1 libblkid1_2.38.1-4 libbrotli1_1.0.9-2+b3 libbsd0_0.11.7-1 libbz2-1.0_1.0.8-5+b2 libc-bin_2.36-6+rpi1 libc-dev-bin_2.36-6+rpi1 libc6_2.36-6+rpi1 libc6-dev_2.36-6+rpi1 libcairo-gobject2_1.16.0-7 libcairo2_1.16.0-7 libcap-ng0_0.8.3-1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_12.2.0-10+rpi1 libcolord2_1.4.6-2.1 libcom-err2_1.46.6~rc1-1 libcommons-logging-java_1.2-3 libcommons-parent-java_56-1 libcrypt-dev_1:4.4.33-1 libcrypt1_1:4.4.33-1 libcryptsetup12_2:2.6.0-2 libctf-nobfd0_2.39.50.20221208-5+rpi1 libctf0_2.39.50.20221208-5+rpi1 libcups2_2.4.2-1+b1 libdatrie1_0.2.13-2+b2 libdav1d6_1.0.0-2+rpi1 libdb5.3_5.3.28+dfsg1-0.10 libdbus-1-3_1.14.4-1 libdconf1_0.40.0-4 libde265-0_1.0.9-1.1+rpi1 libdebconfclient0_0.265 libdebhelper-perl_13.11.4 libdeflate0_1.14-1 libdevmapper1.02.1_2:1.02.185-2 libdouble-conversion3_3.2.1-1 libdpkg-perl_1.21.9+rpi1 libdrm-common_2.4.114-1+rpi1 libdrm2_2.4.114-1+rpi1 libedit2_3.1-20221030-2 libegl-mesa0_22.2.0-1+rpi1 libegl1_1.6.0-1 libelf1_0.187-2+rpi2 libepoxy0_1.5.10-1 libevdev2_1.13.0+dfsg-1+rpi1 libexpat1_2.5.0-1 libexpat1-dev_2.5.0-1 libext2fs2_1.46.6~rc1-1 libfakeroot_1.29-1 libfdisk1_2.38.1-4 libffi8_3.4.4-1 libfile-stripnondeterminism-perl_1.13.1-1 libfontbox-java_1:1.8.16-2 libfontconfig1_2.14.1-3 libfontenc1_1:1.1.4-1 libfreetype6_2.12.1+dfsg-4 libfribidi0_1.0.8-2.1 libgav1-1_0.18.0-1+rpi1+b1 libgbm1_22.2.0-1+rpi1 libgcc-12-dev_12.2.0-10+rpi1 libgcc-s1_12.2.0-10+rpi1 libgcrypt20_1.10.1-3 libgd3_2.3.3-7+b1 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgdk-pixbuf-2.0-0_2.42.10+dfsg-1+b1 libgdk-pixbuf2.0-common_2.42.10+dfsg-1 libglapi-mesa_22.2.0-1+rpi1 libgles2_1.6.0-1 libglib2.0-0_2.74.5-1 libglvnd0_1.6.0-1 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-4 libgomp1_12.2.0-10+rpi1 libgpg-error0_1.46-1 libgraphite2-3_1.3.14-1 libgs-common_10.0.0~dfsg-9 libgs10_10.0.0~dfsg-9+b1 libgs10-common_10.0.0~dfsg-9 libgssapi-krb5-2_1.20.1-1 libgtk-3-0_3.24.36-2 libgtk-3-common_3.24.36-2 libgudev-1.0-0_237-2 libharfbuzz0b_6.0.0-1 libheif1_1.14.2-1 libhogweed6_3.8.1-2 libice6_2:1.0.10-1 libicu72_72.1-3 libidn12_1.41-1 libidn2-0_2.3.3-1 libijs-0.35_0.35-15 libinput-bin_1.22.1-1 libinput10_1.22.1-1 libip4tc2_1.8.9-2 libisl23_0.25-1 libjansson4_2.14-2 libjbig0_2.1-6.1 libjbig2dec0_0.19-3+b2 libjpeg62-turbo_1:2.1.2-1 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-sphinxdoc_5.3.0-3 libjs-underscore_1.13.4~dfsg+~1.11.4-3 libjson-c5_0.16-2 libk5crypto3_1.20.1-1 libkeyutils1_1.6.3-1 libkmod2_30+20221128-1 libkpathsea6_2022.20220321.62855-5 libkrb5-3_1.20.1-1 libkrb5support0_1.20.1-1 libksba8_1.6.2-4 liblcms2-2_2.14-1+b1 libldap-2.5-0_2.5.13+dfsg-2+rpi1+b1 liblerc4_4.0.0+ds-2 liblua5.4-0_5.4.4-3 liblz4-1_1.9.4-1+rpi1 liblzma5_5.4.0-0.1 libmagic-mgc_1:5.44-3 libmagic1_1:5.44-3 libmd0_1.0.4-2 libmd4c0_0.4.8-1 libmount1_2.38.1-4 libmpc3_1.2.1-2 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libmtdev1_1.1.6-1 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnotify4_0.8.1-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libopenjp2-7_2.5.0-1+b1 libp11-kit0_0.24.1-1 libpam-cap_1:2.44-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam-systemd_252.4-1+rpi1 libpam0g_1.5.2-5 libpango-1.0-0_1.50.12+ds-1 libpangocairo-1.0-0_1.50.12+ds-1 libpangoft2-1.0-0_1.50.12+ds-1 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre2-16-0_10.42-1 libpcre2-32-0_10.42-1 libpcre2-8-0_10.42-1 libpcre3_2:8.39-14 libpdfbox-java_1:1.8.16-2 libperl5.36_5.36.0-6 libpipeline1_1.5.7-1 libpixman-1-0_0.42.2-1 libpng16-16_1.6.39-2 libproc2-0_2:4.0.2-3 libptexenc1_2022.20220321.62855-5 libpython3-all-dev_3.11.1-2 libpython3-dev_3.11.1-2 libpython3-stdlib_3.11.1-2 libpython3.11_3.11.1-2 libpython3.11-dev_3.11.1-2 libpython3.11-minimal_3.11.1-2 libpython3.11-stdlib_3.11.1-2 libqt5core5a_5.15.8+dfsg-2+rpi1 libqt5dbus5_5.15.8+dfsg-2+rpi1 libqt5gui5_5.15.8+dfsg-2+rpi1 libqt5network5_5.15.8+dfsg-2+rpi1 libqt5printsupport5_5.15.8+dfsg-2+rpi1 libqt5svg5_5.15.8-2 libqt5widgets5_5.15.8+dfsg-2+rpi1 librav1e0_0.5.1-6 libreadline8_8.2-1.2 libsasl2-2_2.1.28+dfsg-10 libsasl2-modules-db_2.1.28+dfsg-10 libseccomp2_2.5.4-1+rpi1 libselinux1_3.4-1 libsemanage-common_3.4-1 libsemanage2_3.4-1 libsepol1_3.1-1 libsepol2_3.4-2 libsimde-dev_0.7.2-6 libsm6_2:1.2.3-1 libsmartcols1_2.38.1-4 libsqlite3-0_3.40.0-1 libss2_1.46.6~rc1-1 libssl1.1_1.1.1o-1 libssl3_3.0.7-1 libstdc++-12-dev_12.2.0-10+rpi1 libstdc++6_12.2.0-10+rpi1 libsub-override-perl_0.09-4 libsvtav1enc1_1.4.1+dfsg-1 libsynctex2_2022.20220321.62855-5 libsystemd-shared_252.4-1+rpi1 libsystemd0_252.4-1+rpi1 libtasn1-6_4.19.0-2 libteckit0_2.5.11+ds1-1 libtexlua53-5_2022.20220321.62855-5 libtexluajit2_2022.20220321.62855-5 libthai-data_0.1.29-1 libthai0_0.1.29-1 libtiff6_4.5.0-4 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libubsan1_12.2.0-10+rpi1 libuchardet0_0.0.7-1 libudev1_252.4-1+rpi1 libunistring2_1.0-2 libuuid1_2.38.1-4 libwacom-common_2.5.0-1 libwacom9_2.5.0-1 libwayland-client0_1.21.0-1 libwayland-cursor0_1.21.0-1 libwayland-egl1_1.21.0-1 libwayland-server0_1.21.0-1 libwebp7_1.2.4-0.1 libwxbase3.2-1_3.2.1+dfsg-4+b1 libwxgtk3.2-1_3.2.1+dfsg-4+b1 libx11-6_2:1.8.3-3 libx11-data_2:1.8.3-3 libx11-xcb1_2:1.8.3-3 libx265-199_3.5-2 libxau6_1:1.0.9-1 libxaw7_2:1.0.14-1 libxcb-dri2-0_1.15-1 libxcb-dri3-0_1.15-1 libxcb-icccm4_0.4.1-1.1 libxcb-image0_0.4.0-2 libxcb-keysyms1_0.4.0-1+b2 libxcb-present0_1.15-1 libxcb-randr0_1.15-1 libxcb-render-util0_0.3.9-1+b1 libxcb-render0_1.15-1 libxcb-shape0_1.15-1 libxcb-shm0_1.15-1 libxcb-sync1_1.15-1 libxcb-util1_0.4.0-1 libxcb-xfixes0_1.15-1 libxcb-xinerama0_1.15-1 libxcb-xinput0_1.15-1 libxcb-xkb1_1.15-1 libxcb1_1.15-1 libxcomposite1_1:0.4.5-1 libxcursor1_1:1.2.1-1 libxdamage1_1:1.1.6-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxfixes3_1:6.0.0-2 libxi6_2:1.8-1 libxinerama1_2:1.1.4-3 libxkbcommon-x11-0_1.5.0-1 libxkbcommon0_1.5.0-1 libxml2_2.9.14+dfsg-1.1+b1 libxmu6_2:1.1.3-3 libxpm4_1:3.5.12-1.1 libxrandr2_2:1.5.2-2 libxrender1_1:0.9.10-1.1 libxshmfence1_1.3-1 libxt6_1:1.2.1-1 libxtst6_2:1.2.3-1.1 libxxhash0_0.8.1-1 libyuv0_0.0~git20230104.6e4b0ac-1 libzstd1_1.5.2+dfsg-1 libzzip-0-13_0.13.72+dfsg.1-1.1 linux-libc-dev_6.0.12-1+rpi1 login_1:4.13+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-2 make_4.3-4.1 man-db_2.11.2-1 mawk_1.3.4.20200120-3.1 media-types_8.0.0 mount_2.38.1-4 nano_7.1-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.4 passwd_1:4.13+dfsg1-1 patch_2.7.6-7 perl_5.36.0-6 perl-base_5.36.0-6 perl-modules-5.36_5.36.0-6 pinentry-curses_1.2.1-1 po-debconf_1.0.21+nmu1 poppler-data_0.4.11-1 preview-latex-style_12.2-1 procps_2:4.0.2-3 python3_3.11.1-2 python3-all_3.11.1-2 python3-all-dev_3.11.1-2 python3-dev_3.11.1-2 python3-distutils_3.10.8-1 python3-lib2to3_3.10.8-1 python3-minimal_3.11.1-2 python3-pkg-resources_65.6.3-1 python3-setuptools_65.6.3-1 python3.11_3.11.1-2 python3.11-dev_3.11.1-2 python3.11-minimal_3.11.1-2 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.2 rpcsvc-proto_1.4.3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-minimap2-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 shared-mime-info_2.2-1 systemd_252.4-1+rpi1 systemd-sysv_252.4-1+rpi1 sysvinit-utils_3.05-7 t1utils_1.41-4 tar_1.34+dfsg-1 tex-common_6.18 texlive-base_2022.20221123-1 texlive-binaries_2022.20220321.62855-5 texlive-font-utils_2022.20221123-2 texlive-fonts-recommended_2022.20221123-1 texlive-lang-greek_2022.20221123-1 texlive-latex-base_2022.20221123-1 texlive-latex-extra_2022.20221123-2 texlive-latex-recommended_2022.20221123-1 texlive-pictures_2022.20221123-1 texlive-science_2022.20221123-2 tzdata_2022f-1 ucf_3.0043 util-linux_2.38.1-4 util-linux-extra_2.38.1-4 x11-common_1:7.7+23 xdg-utils_1.1.3-4.1 xfonts-encodings_1:1.0.4-2.2 xfonts-utils_1:7.7+6 xkb-data_2.35.1-1 xz-utils_5.4.0-0.1 zlib1g_1:1.2.13.dfsg-1 zlib1g-dev_1:1.2.13.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.Lynschdj/trustedkeys.kbx': General error
gpgv: Signature made Wed Nov 30 19:57:09 2022 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./minimap2_2.24+dfsg-3.dsc
dpkg-source: info: extracting minimap2 in /<<BUILDDIR>>/minimap2-2.24+dfsg
dpkg-source: info: unpacking minimap2_2.24+dfsg.orig.tar.xz
dpkg-source: info: unpacking minimap2_2.24+dfsg-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying do_not_use_natbib.bst.patch
dpkg-source: info: applying ar.patch
dpkg-source: info: applying link_mappy_to_libminimap.patch
dpkg-source: info: applying python-sse4-arch.patch
dpkg-source: info: applying simde
dpkg-source: info: applying reenable-simde.patch
Check disc space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 2.24+dfsg-3+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-e2cb9fb9-48cd-4cab-a48c-ed1267a8e0dc
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package minimap2
dpkg-buildpackage: info: source version 2.24+dfsg-3+b1
dpkg-buildpackage: info: source distribution bookworm-staging
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --with python3
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
dh_auto_clean
make -j4 clean
make[2]: Entering directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
rm -fr gmon.out *.o a.out minimap2 sdust minimap2-lite *~ *.a *.dSYM build dist mappy*.so mappy.c python/mappy.c mappy.egg*
make[2]: Leaving directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
cd tex && make clean
make[2]: Entering directory '/<<BUILDDIR>>/minimap2-2.24+dfsg/tex'
rm -fr *.toc *.aux *.bbl *.blg *.idx *.log *.out *~ minimap2.pdf
make[2]: Leaving directory '/<<BUILDDIR>>/minimap2-2.24+dfsg/tex'
rm -f MT-human.mmi
rm -f tex/minimap2.aux tex/minimap2.bbl tex/minimap2.blg tex/minimap2.log tex/minimap2.out tex/minimap2.pdf
rm -f libminimap2.a
make[1]: Leaving directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
dh_clean
debian/rules binary-arch
dh binary-arch --with python3
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
dh_auto_build -- -f Makefile.simde
make -j4 "INSTALL=install --strip-program=true" -f Makefile.simde
make[2]: Entering directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 main.c -o main.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 kthread.c -o kthread.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 kalloc.c -o kalloc.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 misc.c -o misc.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 bseq.c -o bseq.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 sketch.c -o sketch.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 sdust.c -o sdust.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 options.c -o options.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 index.c -o index.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 lchain.c -o lchain.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 align.c -o align.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 hit.c -o hit.o
index.c: In function 'mm_idx_load':
index.c:519:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
519 | fread(&l, 1, 1, fp);
| ^~~~~~~~~~~~~~~~~~~
index.c:522:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
522 | fread(s->name, 1, l, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~
index.c:525:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
525 | fread(&s->len, 4, 1, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~
index.c:535:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
535 | fread(&b->n, 4, 1, fp);
| ^~~~~~~~~~~~~~~~~~~~~~
index.c:537:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
537 | fread(b->p, 8, b->n, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~
index.c:538:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
538 | fread(&size, 4, 1, fp);
| ^~~~~~~~~~~~~~~~~~~~~~
index.c:545:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
545 | fread(x, 8, 2, fp);
| ^~~~~~~~~~~~~~~~~~
index.c:553:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
553 | fread(mi->S, 4, (sum_len + 7) / 8, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 seed.c -o seed.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 map.c -o map.o
map.c: In function 'mm_map_frag':
map.c:370:60: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
370 | fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
| ~~^ ~~~~~~~~~~~~~
| | |
| long int size_t {aka unsigned int}
| %d
map.c:370:70: warning: format '%ld' expects argument of type 'long int', but argument 6 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
370 | fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
| ~~^ ~~~~~~~~~~~~
| | |
| long int size_t {aka unsigned int}
| %d
map.c:370:82: warning: format '%ld' expects argument of type 'long int', but argument 7 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
370 | fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
| ~~^ ~~~~~~~~~~~~
| | |
| long int size_t {aka unsigned int}
| %d
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 format.c -o format.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 pe.c -o pe.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 esterr.c -o esterr.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 splitidx.c -o splitidx.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 ksw2_ll_sse.c -o ksw2_ll_sse.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 -DKSW_SSE2_ONLY -D__SSE2__ ksw2_extz2_sse.c -o ksw2_extz2.o
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 -DKSW_SSE2_ONLY -D__SSE2__ ksw2_extd2_sse.c -o ksw2_extd2.o
ksw2_extz2_sse.c:5: warning: "SIMDE_ENABLE_NATIVE_ALIASES" redefined
5 | #define SIMDE_ENABLE_NATIVE_ALIASES
|
<command-line>: note: this is the location of the previous definition
ksw2_extd2_sse.c:6: warning: "SIMDE_ENABLE_NATIVE_ALIASES" redefined
6 | #define SIMDE_ENABLE_NATIVE_ALIASES
|
<command-line>: note: this is the location of the previous definition
cc -c -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -Wdate-time -D_FORTIFY_SOURCE=2 -DKSW_SSE2_ONLY -D__SSE2__ ksw2_exts2_sse.c -o ksw2_exts2.o
ksw2_exts2_sse.c:6: warning: "SIMDE_ENABLE_NATIVE_ALIASES" redefined
6 | #define SIMDE_ENABLE_NATIVE_ALIASES
|
<command-line>: note: this is the location of the previous definition
rm -f libminimap2.a
ar csrD libminimap2.a kthread.o kalloc.o misc.o bseq.o sketch.o sdust.o options.o index.o lchain.o align.o hit.o seed.o map.o format.o pe.o esterr.o splitidx.o ksw2_ll_sse.o ksw2_extz2.o ksw2_extd2.o ksw2_exts2.o
cc -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -g -Wall -O2 -Wc++-compat -DHAVE_KALLOC -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES main.o -o minimap2 -L. -lminimap2 -lm -lz -lpthread -Wl,-z,relro -Wl,-z,now
make[2]: Leaving directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
cd tex && make
make[2]: Entering directory '/<<BUILDDIR>>/minimap2-2.24+dfsg/tex'
gnuplot roc.gp
epstopdf --outfile roc-color.pdf roc-color.eps
pdflatex minimap2; bibtex minimap2; pdflatex minimap2; pdflatex minimap2;
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[]\OT1/ptm/m/n/9 The capability of minimap2 comes from a fast base-level
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\OT1/ptm/m/n/9 releasing their masterpiece and insightful notes before formal
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[]\OT1/ptm/m/n/9 2016[]), Kart (v2.2.5; []Lin and Hsu[], []2017[]), minialign (
v0.5.3;
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dlazeck
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h
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[4 <./roc-color.pdf>]
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\OT1/ptm/m/n/9 Direct RNA-seq dataset ([]http://bit.ly/na12878ont[]). Minimap2
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\OT1/ptm/m/n/9 the paftools.js script from the minimap2 package, we called
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[]\OT1/ptm/m/n/9 The capability of minimap2 comes from a fast base-level
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\OT1/ptm/m/n/9 releasing their masterpiece and insightful notes before formal
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AMtools.
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Output written on minimap2.pdf (6 pages, 269223 bytes).
Transcript written on minimap2.log.
make[2]: Leaving directory '/<<BUILDDIR>>/minimap2-2.24+dfsg/tex'
dh_auto_build --buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py build
running build
running build_ext
cythoning python/mappy.pyx to python/mappy.c
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<BUILDDIR>>/minimap2-2.24+dfsg/python/mappy.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mappy' extension
creating build
creating build/temp.linux-armhf-cpython-311
creating build/temp.linux-armhf-cpython-311/python
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c align.c -o build/temp.linux-armhf-cpython-311/align.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
align.c: In function 'mm_get_hplen_back':
align.c:349:43: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
349 | if (mm_seq4_get(mi->S, i) != c) break;
| ^~
align.c: In function 'mm_seed_ext_score':
align.c:536:56: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
536 | re = re + ext_len < (int32_t)mi->seq[rid].len? re + ext_len : mi->seq[rid].len;
| ^~~~~~~~~~~~
align.c: In function 'mm_align1':
align.c:630:59: warning: operand of '?:' changes signedness from 'int32_t' {aka 'int'} to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
630 | re0 = re + l < (int32_t)mi->seq[rid].len? re + l : mi->seq[rid].len;
| ^~~~~~
align.c:682:65: warning: operand of '?:' changes signedness from 'int32_t' {aka 'int'} to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
682 | l = l < (int32_t)mi->seq[rid].len - re? l : mi->seq[rid].len - re;
| ^
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c bseq.c -o build/temp.linux-armhf-cpython-311/bseq.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c esterr.c -o build/temp.linux-armhf-cpython-311/esterr.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c format.c -o build/temp.linux-armhf-cpython-311/format.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c hit.c -o build/temp.linux-armhf-cpython-311/hit.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
hit.c: In function 'mm_hit_sort':
hit.c:190:55: warning: variable 'no_cigar' set but not used [-Wunused-but-set-variable]
190 | int32_t i, n_aux, n = *n_regs, has_cigar = 0, no_cigar = 0;
| ^~~~~~~~
hit.c:190:40: warning: variable 'has_cigar' set but not used [-Wunused-but-set-variable]
190 | int32_t i, n_aux, n = *n_regs, has_cigar = 0, no_cigar = 0;
| ^~~~~~~~~
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c index.c -o build/temp.linux-armhf-cpython-311/index.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
index.c: In function 'mm_idx_name2id':
index.c:149:32: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
149 | return k == kh_end(h)? -1 : kh_val(h, k);
| ^~
index.c: In function 'mm_idx_gen':
index.c:381:70: warning: operand of '?:' changes signedness from 'int' to 'uint64_t' {aka 'long long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
381 | pl.mini_batch_size = (uint64_t)mini_batch_size < batch_size? mini_batch_size : batch_size;
| ^~~~~~~~~~~~~~~
index.c: In function 'mm_idx_dump':
index.c:482:23: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
482 | for (i = 0; i < 1<<mi->b; ++i) {
| ^
index.c: In function 'mm_idx_load':
index.c:530:23: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
530 | for (i = 0; i < 1<<mi->b; ++i) {
| ^
index.c: In function 'mm_idx_bed_read':
index.c:747:23: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
747 | for (i = 0; i < mi->n_seq; ++i) // TODO: eliminate redundant intervals
| ^
index.c: In function 'mm_idx_bed_junc':
index.c:757:42: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
757 | if (mi->I == 0 || ctg < 0 || ctg >= mi->n_seq) return -1;
| ^~
index.c: In function 'mm_idx_load':
index.c:519:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
519 | fread(&l, 1, 1, fp);
| ^~~~~~~~~~~~~~~~~~~
index.c:522:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
522 | fread(s->name, 1, l, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~
index.c:525:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
525 | fread(&s->len, 4, 1, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~
index.c:535:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
535 | fread(&b->n, 4, 1, fp);
| ^~~~~~~~~~~~~~~~~~~~~~
index.c:537:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
537 | fread(b->p, 8, b->n, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~
index.c:538:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
538 | fread(&size, 4, 1, fp);
| ^~~~~~~~~~~~~~~~~~~~~~
index.c:545:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
545 | fread(x, 8, 2, fp);
| ^~~~~~~~~~~~~~~~~~
index.c:553:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
553 | fread(mi->S, 4, (sum_len + 7) / 8, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c kalloc.c -o build/temp.linux-armhf-cpython-311/kalloc.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c ksw2_extd2_sse.c -o build/temp.linux-armhf-cpython-311/ksw2_extd2_sse.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
ksw2_extd2_sse.c:6: warning: "SIMDE_ENABLE_NATIVE_ALIASES" redefined
6 | #define SIMDE_ENABLE_NATIVE_ALIASES
|
<command-line>: note: this is the location of the previous definition
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c ksw2_exts2_sse.c -o build/temp.linux-armhf-cpython-311/ksw2_exts2_sse.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
ksw2_exts2_sse.c:6: warning: "SIMDE_ENABLE_NATIVE_ALIASES" redefined
6 | #define SIMDE_ENABLE_NATIVE_ALIASES
|
<command-line>: note: this is the location of the previous definition
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c ksw2_extz2_sse.c -o build/temp.linux-armhf-cpython-311/ksw2_extz2_sse.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
ksw2_extz2_sse.c:5: warning: "SIMDE_ENABLE_NATIVE_ALIASES" redefined
5 | #define SIMDE_ENABLE_NATIVE_ALIASES
|
<command-line>: note: this is the location of the previous definition
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c ksw2_ll_sse.c -o build/temp.linux-armhf-cpython-311/ksw2_ll_sse.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c kthread.c -o build/temp.linux-armhf-cpython-311/kthread.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c lchain.c -o build/temp.linux-armhf-cpython-311/lchain.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
lchain.c: In function 'mg_chain_bk_end':
lchain.c:18:37: warning: operand of '?:' changes signedness from 'int32_t' {aka 'int'} to 'uint64_t' {aka 'long long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
18 | s = i < 0? z[k].x : (int32_t)z[k].x - f[i];
| ^~~~~~~~~~~~~~~~~~~~~~
lchain.c: In function 'mg_chain_backtrack':
lchain.c:51:46: warning: operand of '?:' changes signedness from 'int32_t' {aka 'int'} to 'uint64_t' {aka 'long long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
51 | sc = i < 0? z[k].x : (int32_t)z[k].x - f[i];
| ^~~~~~~~~~~~~~~~~~~~~~
lchain.c:66:46: warning: operand of '?:' changes signedness from 'int32_t' {aka 'int'} to 'uint64_t' {aka 'long long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
66 | sc = i < 0? z[k].x : (int32_t)z[k].x - f[i];
| ^~~~~~~~~~~~~~~~~~~~~~
lchain.c: In function 'mg_lchain_dp':
lchain.c:190:56: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long long unsigned int'} and 'long long int' [-Wsign-compare]
190 | if (max_ii < 0 || a[i].x - a[max_ii].x > (int64_t)max_dist_x) {
| ^
lchain.c:204:57: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long long unsigned int'} and 'long long int' [-Wsign-compare]
204 | if (max_ii < 0 || (a[i].x - a[max_ii].x <= (int64_t)max_dist_x && f[max_ii] < f[i]))
| ^~
lchain.c: In function 'mg_lchain_rmq':
lchain.c:295:117: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
295 | while (st < i && (a[i].x>>32 != a[st].x>>32 || a[i].x > a[st].x + max_dist || krmq_size(head, root) > cap_rmq_size)) {
| ^
lchain.c:304:155: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
304 | while (st_inner < i && (a[i].x>>32 != a[st_inner].x>>32 || a[i].x > a[st_inner].x + max_dist_inner || krmq_size(head, root_inner) > cap_rmq_size)) {
| ^
lchain.c:357:34: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
357 | if (max_rmq_size < krmq_size(head, root)) max_rmq_size = krmq_size(head, root);
| ^
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c map.c -o build/temp.linux-armhf-cpython-311/map.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
map.c: In function 'mm_dust_minier':
map.c:53:70: warning: operand of '?:' changes signedness from 'int32_t' {aka 'int'} to 'uint64_t' {aka 'long long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
53 | int ss = s > (int32_t)(dreg[v]>>32)? s : dreg[v]>>32;
| ^
map.c:54:64: warning: operand of '?:' changes signedness from 'int32_t' {aka 'int'} to 'unsigned int' due to unsignedness of other operand [-Wsign-compare]
54 | int ee = e < (int32_t)dreg[v]? e : (uint32_t)dreg[v];
| ^
map.c: In function 'mm_map_frag':
map.c:370:60: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
370 | fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
| ~~^ ~~~~~~~~~~~~~
| | |
| long int size_t {aka unsigned int}
| %d
map.c:370:70: warning: format '%ld' expects argument of type 'long int', but argument 6 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
370 | fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
| ~~^ ~~~~~~~~~~~~
| | |
| long int size_t {aka unsigned int}
| %d
map.c:370:82: warning: format '%ld' expects argument of type 'long int', but argument 7 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
370 | fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
| ~~^ ~~~~~~~~~~~~
| | |
| long int size_t {aka unsigned int}
| %d
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c misc.c -o build/temp.linux-armhf-cpython-311/misc.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c options.c -o build/temp.linux-armhf-cpython-311/options.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c pe.c -o build/temp.linux-armhf-cpython-311/pe.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c python/mappy.c -o build/temp.linux-armhf-cpython-311/python/mappy.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c sdust.c -o build/temp.linux-armhf-cpython-311/sdust.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c seed.c -o build/temp.linux-armhf-cpython-311/seed.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
seed.c: In function 'mm_seed_mz_flt':
seed.c:9:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
9 | if (mv->n <= q_occ_max || q_occ_frac <= 0.0f || q_occ_max <= 0) return;
| ^~
seed.c: In function 'mm_seed_select':
seed.c:65:28: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
65 | if (a[i].n > max_occ) ++m;
| ^
seed.c:68:38: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
68 | if (i == n || a[i].n <= max_occ) {
| ^~
seed.c:71:54: warning: operand of '?:' changes signedness from 'int' to 'unsigned int' due to unsignedness of other operand [-Wsign-compare]
71 | int32_t pe = i == n? len : (uint32_t)a[i].q_pos>>1;
| ^~~
seed.c:81:60: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
81 | if (a[j].n < (int32_t)(b[0]>>32)) { // then update the heap
| ^
seed.c:90:52: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
90 | if (a[j].n > max_max_occ)
| ^
seed.c: In function 'mm_collect_matches':
seed.c:109:31: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
109 | for (i = 0; i < n_m0; ++i)
| ^
seed.c:110:36: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
110 | if (m[i].n > max_occ)
| ^
seed.c:113:56: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
113 | for (i = 0, n_m = 0, *rep_len = 0, *n_a = 0; i < n_m0; ++i) {
| ^
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c sketch.c -o build/temp.linux-armhf-cpython-311/sketch.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/usr/include/python3.11 -c splitidx.c -o build/temp.linux-armhf-cpython-311/splitidx.o -DHAVE_KALLOC -DKSW_SSE2_ONLY -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/minimap2-2.24+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/align.o build/temp.linux-armhf-cpython-311/bseq.o build/temp.linux-armhf-cpython-311/esterr.o build/temp.linux-armhf-cpython-311/format.o build/temp.linux-armhf-cpython-311/hit.o build/temp.linux-armhf-cpython-311/index.o build/temp.linux-armhf-cpython-311/kalloc.o build/temp.linux-armhf-cpython-311/ksw2_extd2_sse.o build/temp.linux-armhf-cpython-311/ksw2_exts2_sse.o build/temp.linux-armhf-cpython-311/ksw2_extz2_sse.o build/temp.linux-armhf-cpython-311/ksw2_ll_sse.o build/temp.linux-armhf-cpython-311/kthread.o build/temp.linux-armhf-cpython-311/lchain.o build/temp.linux-armhf-cpython-311/map.o build/temp.linux-armhf-cpython-311/misc.o build/temp.linux-armhf-cpython-311/options.o build/temp.linux-armhf-cpython-311/pe.o build/temp.linux-armhf-cpython-311/python/mappy.o build/temp.linux-armhf-cpython-311/sdust.o build/temp.linux-armhf-cpython-311/seed.o build/temp.linux-armhf-cpython-311/sketch.o build/temp.linux-armhf-cpython-311/splitidx.o -L/usr/lib/arm-linux-gnueabihf -lz -lm -lpthread -o /<<BUILDDIR>>/minimap2-2.24+dfsg/.pybuild/cpython3_3.11/build/mappy.cpython-311-arm-linux-gnueabihf.so
running build_scripts
creating build/scripts-3.11
copying and adjusting python/minimap2.py -> build/scripts-3.11
changing mode of build/scripts-3.11/minimap2.py from 644 to 755
make[1]: Leaving directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
debian/test_script
[M::mm_idx_gen::0.009*1.10] collected minimizers
[M::mm_idx_gen::0.013*1.52] sorted minimizers
[M::main::0.013*1.50] loaded/built the index for 1 target sequence(s)
[M::mm_mapopt_update::0.016*1.58] mid_occ = 10
[M::mm_idx_stat] kmer size: 15; skip: 10; is_hpc: 0; #seq: 1
[M::mm_idx_stat::0.018*1.40] distinct minimizers: 3111 (100.00% are singletons); average occurrences: 1.000; average spacing: 5.326; total length: 16569
[M::worker_pipeline::1.002*1.01] mapped 1 sequences
[M::main] Version: 2.24-r1122
[M::main] CMD: minimap2 -a test/MT-human.fa test/MT-orang.fa
[M::main] Real time: 1.009 sec; CPU: 1.015 sec; Peak RSS: 0.003 GB
[M::mm_idx_gen::0.009*1.13] collected minimizers
[M::mm_idx_gen::0.013*1.55] sorted minimizers
[M::main::0.025*1.40] loaded/built the index for 1 target sequence(s)
[M::mm_idx_stat] kmer size: 15; skip: 10; is_hpc: 0; #seq: 1
[M::mm_idx_stat::0.028*1.24] distinct minimizers: 3111 (100.00% are singletons); average occurrences: 1.000; average spacing: 5.326; total length: 16569
[M::main] Version: 2.24-r1122
[M::main] CMD: minimap2 -d MT-human.mmi test/MT-human.fa
[M::main] Real time: 0.036 sec; CPU: 0.040 sec; Peak RSS: 0.003 GB
[M::main::0.020*1.01] loaded/built the index for 1 target sequence(s)
[M::mm_mapopt_update::0.023*1.08] mid_occ = 10
[M::mm_idx_stat] kmer size: 15; skip: 10; is_hpc: 0; #seq: 1
[M::mm_idx_stat::0.026*0.95] distinct minimizers: 3111 (100.00% are singletons); average occurrences: 1.000; average spacing: 5.326; total length: 16569
[M::worker_pipeline::1.017*1.00] mapped 1 sequences
[M::main] Version: 2.24-r1122
[M::main] CMD: minimap2 -a MT-human.mmi test/MT-orang.fa
[M::main] Real time: 1.026 sec; CPU: 1.025 sec; Peak RSS: 0.004 GB
rm test.sam
make[1]: Leaving directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
create-stamp debian/debhelper-build-stamp
dh_prep -a
dh_installdirs -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
dh_auto_install
dh_auto_install --buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py install --root /<<BUILDDIR>>/minimap2-2.24+dfsg/debian/tmp
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
warnings.warn(
running build
running build_ext
skipping 'python/mappy.c' Cython extension (up-to-date)
running build_scripts
running install_lib
creating /<<BUILDDIR>>/minimap2-2.24+dfsg/debian/tmp/usr
creating /<<BUILDDIR>>/minimap2-2.24+dfsg/debian/tmp/usr/lib
creating /<<BUILDDIR>>/minimap2-2.24+dfsg/debian/tmp/usr/lib/python3.11
creating /<<BUILDDIR>>/minimap2-2.24+dfsg/debian/tmp/usr/lib/python3.11/dist-packages
copying /<<BUILDDIR>>/minimap2-2.24+dfsg/.pybuild/cpython3_3.11/build/mappy.cpython-311-arm-linux-gnueabihf.so -> /<<BUILDDIR>>/minimap2-2.24+dfsg/debian/tmp/usr/lib/python3.11/dist-packages
running install_egg_info
running egg_info
creating mappy.egg-info
writing mappy.egg-info/PKG-INFO
writing dependency_links to mappy.egg-info/dependency_links.txt
writing top-level names to mappy.egg-info/top_level.txt
writing manifest file 'mappy.egg-info/SOURCES.txt'
reading manifest file 'mappy.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'sse2neon/emmintrin.h'
adding license file 'LICENSE.txt'
writing manifest file 'mappy.egg-info/SOURCES.txt'
Copying mappy.egg-info to /<<BUILDDIR>>/minimap2-2.24+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/mappy-2.24.egg-info
Skipping SOURCES.txt
running install_scripts
creating /<<BUILDDIR>>/minimap2-2.24+dfsg/debian/tmp/usr/bin
copying build/scripts-3.11/minimap2.py -> /<<BUILDDIR>>/minimap2-2.24+dfsg/debian/tmp/usr/bin
changing mode of /<<BUILDDIR>>/minimap2-2.24+dfsg/debian/tmp/usr/bin/minimap2.py to 755
make[1]: Leaving directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
debian/rules override_dh_installman
make[1]: Entering directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
dh_installman --language=C
make[1]: Leaving directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
dh_python3 -a
dh_lintian -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
debian/rules override_dh_compress
make[1]: Entering directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
dh_compress --exclude=.pdf
make[1]: Leaving directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
dh_fixperms -a
dh_missing -a
dh_dwz -a
debian/rules override_dh_strip
make[1]: Entering directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
dh_strip
ranlib /<<BUILDDIR>>/minimap2-2.24+dfsg/debian/libminimap2-dev/usr/lib/libminimap2.a
make[1]: Leaving directory '/<<BUILDDIR>>/minimap2-2.24+dfsg'
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/minimap2/usr/bin/minimap2 was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package libminimap2-dev: substitution variable ${shlibs:Depends} used, but is not defined
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'libminimap2-dev' in '../libminimap2-dev_2.24+dfsg-3+b1_armhf.deb'.
dpkg-deb: building package 'minimap2' in '../minimap2_2.24+dfsg-3+b1_armhf.deb'.
dpkg-deb: building package 'python3-mappy-dbgsym' in '../python3-mappy-dbgsym_2.24+dfsg-3+b1_armhf.deb'.
dpkg-deb: building package 'python3-mappy' in '../python3-mappy_2.24+dfsg-3+b1_armhf.deb'.
dpkg-deb: building package 'minimap2-dbgsym' in '../minimap2-dbgsym_2.24+dfsg-3+b1_armhf.deb'.
dpkg-genbuildinfo --build=any -O../minimap2_2.24+dfsg-3+b1_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> -O../minimap2_2.24+dfsg-3+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-02-01T07:33:58Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
minimap2_2.24+dfsg-3+b1_armhf.changes:
--------------------------------------
Format: 1.8
Date: Wed, 30 Nov 2022 20:52:21 +0100
Source: minimap2 (2.24+dfsg-3)
Binary: libminimap2-dev minimap2 minimap2-dbgsym python3-mappy python3-mappy-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 2.24+dfsg-3+b1
Distribution: bookworm-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
libminimap2-dev - development headers for libminimap
minimap2 - versatile pairwise aligner for genomic and spliced nucleotide seq
python3-mappy - Python3 interface minimap2
Changes:
minimap2 (2.24+dfsg-3+b1) bookworm-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
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Checksums-Sha256:
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2f12c9a9273cbfefa4954e7577d95d25f6f1ae5dcad33c186c089503e37fe793 269844 minimap2-dbgsym_2.24+dfsg-3+b1_armhf.deb
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Files:
6186026d1dc7881404f1bc0f9385893c 123164 libdevel optional libminimap2-dev_2.24+dfsg-3+b1_armhf.deb
6e1bd8c3c87a5ad70f79292d5265c39a 269844 debug optional minimap2-dbgsym_2.24+dfsg-3+b1_armhf.deb
097df0c88a73abbb4ad8029d1809a11e 14671 science optional minimap2_2.24+dfsg-3+b1_armhf.buildinfo
135ee13ff7b84c17f342b78eeb28f65e 392448 science optional minimap2_2.24+dfsg-3+b1_armhf.deb
1e38cd68f6a1be5f7370bf69e66e4181 493220 debug optional python3-mappy-dbgsym_2.24+dfsg-3+b1_armhf.deb
c72e29faeca0e4abdb1b92ab02f1d222 143480 python optional python3-mappy_2.24+dfsg-3+b1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libminimap2-dev_2.24+dfsg-3+b1_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 123164 bytes: control archive=1376 bytes.
1051 bytes, 23 lines control
1060 bytes, 18 lines md5sums
Package: libminimap2-dev
Source: minimap2 (2.24+dfsg-3)
Version: 2.24+dfsg-3+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 354
Depends: zlib1g-dev
Section: libdevel
Priority: optional
Homepage: https://github.com/lh3/minimap2
Description: development headers for libminimap
Minimap2 is a versatile sequence alignment program that aligns DNA or
mRNA sequences against a large reference database. Typical use cases
include: (1) mapping PacBio or Oxford Nanopore genomic reads to the
human genome; (2) finding overlaps between long reads with error rate up
to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA
or Direct RNA reads against a reference genome; (4) aligning Illumina
single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full-
genome alignment between two closely related species with divergence
below ~15%.
.
This package contains the C library headers for using minimap in custom tools,
along with a static library.
drwxr-xr-x root/root 0 2022-11-30 19:52 ./
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/include/
-rw-r--r-- root/root 1811 2021-12-26 20:14 ./usr/include/bseq.h
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-rw-r--r-- root/root 4400 2021-12-26 20:14 ./usr/include/kdq.h
-rw-r--r-- root/root 3969 2021-12-26 20:14 ./usr/include/ketopt.h
-rw-r--r-- root/root 21381 2021-12-26 20:14 ./usr/include/khash.h
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-rw-r--r-- root/root 3029 2021-12-26 20:14 ./usr/include/kvec.h
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-rw-r--r-- root/root 6507 2021-12-26 20:14 ./usr/include/mmpriv.h
-rw-r--r-- root/root 574 2021-12-26 20:14 ./usr/include/sdust.h
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/
-rw-r--r-- root/root 242514 2022-11-30 19:52 ./usr/lib/libminimap2.a
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/doc/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/doc/libminimap2-dev/
-rw-r--r-- root/root 225 2022-11-30 19:52 ./usr/share/doc/libminimap2-dev/changelog.Debian.armhf.gz
-rw-r--r-- root/root 1566 2022-11-30 19:52 ./usr/share/doc/libminimap2-dev/changelog.Debian.gz
-rw-r--r-- root/root 3132 2022-11-30 19:52 ./usr/share/doc/libminimap2-dev/copyright
minimap2-dbgsym_2.24+dfsg-3+b1_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 269844 bytes: control archive=544 bytes.
402 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: minimap2-dbgsym
Source: minimap2 (2.24+dfsg-3)
Version: 2.24+dfsg-3+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 287
Depends: minimap2 (= 2.24+dfsg-3+b1)
Section: debug
Priority: optional
Description: debug symbols for minimap2
Build-Ids: 80a79440107830e20c5e39cd104aff1e8fb11e2a
drwxr-xr-x root/root 0 2022-11-30 19:52 ./
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/debug/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/debug/.build-id/80/
-rw-r--r-- root/root 282904 2022-11-30 19:52 ./usr/lib/debug/.build-id/80/a79440107830e20c5e39cd104aff1e8fb11e2a.debug
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/doc/
lrwxrwxrwx root/root 0 2022-11-30 19:52 ./usr/share/doc/minimap2-dbgsym -> minimap2
minimap2_2.24+dfsg-3+b1_armhf.deb
---------------------------------
new Debian package, version 2.0.
size 392448 bytes: control archive=1536 bytes.
1465 bytes, 28 lines control
1064 bytes, 15 lines md5sums
Package: minimap2
Source: minimap2 (2.24+dfsg-3)
Version: 2.24+dfsg-3+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 573
Depends: libc6 (>= 2.34), zlib1g (>= 1:1.1.4)
Section: science
Priority: optional
Homepage: https://github.com/lh3/minimap2
Description: versatile pairwise aligner for genomic and spliced nucleotide sequences
Minimap2 is a versatile sequence alignment program that aligns DNA or
mRNA sequences against a large reference database. Typical use cases
include: (1) mapping PacBio or Oxford Nanopore genomic reads to the
human genome; (2) finding overlaps between long reads with error rate up
to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA
or Direct RNA reads against a reference genome; (4) aligning Illumina
single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full-
genome alignment between two closely related species with divergence
below ~15%.
.
For ~10kb noisy reads sequences, minimap2 is tens of times faster than
mainstream long-read mappers such as BLASR, BWA-MEM, NGMLR and GMAP. It
is more accurate on simulated long reads and produces biologically
meaningful alignment ready for downstream analyses. For >100bp Illumina
short reads, minimap2 is three times as fast as BWA-MEM and Bowtie2, and
as accurate on simulated data. Detailed evaluations are available from
the minimap2 paper or the preprint.
drwxr-xr-x root/root 0 2022-11-30 19:52 ./
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/bin/
-rwxr-xr-x root/root 264908 2022-11-30 19:52 ./usr/bin/minimap2
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drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/doc-base/
-rw-r--r-- root/root 553 2022-11-30 19:52 ./usr/share/doc-base/minimap2.minimap2
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/doc/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/doc/minimap2/
-rw-r--r-- root/root 225 2022-11-30 19:52 ./usr/share/doc/minimap2/changelog.Debian.armhf.gz
-rw-r--r-- root/root 1562 2022-11-30 19:52 ./usr/share/doc/minimap2/changelog.Debian.gz
-rw-r--r-- root/root 3132 2022-11-30 19:52 ./usr/share/doc/minimap2/copyright
-rw-r--r-- root/root 269223 2022-11-30 19:52 ./usr/share/doc/minimap2/minimap2.pdf
-rw-r--r-- root/root 347 2022-11-30 19:52 ./usr/share/doc/minimap2/run-unit-test
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/doc/minimap2/test/
-rw-r--r-- root/root 5354 2021-12-26 20:14 ./usr/share/doc/minimap2/test/MT-human.fa.gz
-rw-r--r-- root/root 5367 2021-12-26 20:14 ./usr/share/doc/minimap2/test/MT-orang.fa.gz
-rw-r--r-- root/root 3540 2021-12-26 20:14 ./usr/share/doc/minimap2/test/q-inv.fa.gz
-rw-r--r-- root/root 44 2021-12-26 20:14 ./usr/share/doc/minimap2/test/q2.fa
-rw-r--r-- root/root 2525 2021-12-26 20:14 ./usr/share/doc/minimap2/test/t-inv.fa.gz
-rw-r--r-- root/root 79 2021-12-26 20:14 ./usr/share/doc/minimap2/test/t2.fa
-rw-r--r-- root/root 1095 2022-11-30 19:52 ./usr/share/doc/minimap2/test_script
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/man/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/man/man1/
-rw-r--r-- root/root 7695 2022-11-30 19:52 ./usr/share/man/man1/minimap2.1.gz
python3-mappy-dbgsym_2.24+dfsg-3+b1_armhf.deb
---------------------------------------------
new Debian package, version 2.0.
size 493220 bytes: control archive=556 bytes.
417 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: python3-mappy-dbgsym
Source: minimap2 (2.24+dfsg-3)
Version: 2.24+dfsg-3+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 521
Depends: python3-mappy (= 2.24+dfsg-3+b1)
Section: debug
Priority: optional
Description: debug symbols for python3-mappy
Build-Ids: 9641ab1624e5f63604fe7bdb1ea1c9399bbc6902
drwxr-xr-x root/root 0 2022-11-30 19:52 ./
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/debug/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/debug/.build-id/96/
-rw-r--r-- root/root 522416 2022-11-30 19:52 ./usr/lib/debug/.build-id/96/41ab1624e5f63604fe7bdb1ea1c9399bbc6902.debug
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/doc/
lrwxrwxrwx root/root 0 2022-11-30 19:52 ./usr/share/doc/python3-mappy-dbgsym -> python3-mappy
python3-mappy_2.24+dfsg-3+b1_armhf.deb
--------------------------------------
new Debian package, version 2.0.
size 143480 bytes: control archive=1576 bytes.
1074 bytes, 22 lines control
843 bytes, 10 lines md5sums
273 bytes, 12 lines * postinst #!/bin/sh
386 bytes, 12 lines * prerm #!/bin/sh
Package: python3-mappy
Source: minimap2 (2.24+dfsg-3)
Version: 2.24+dfsg-3+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 364
Depends: libc6 (>= 2.34), zlib1g (>= 1:1.2.3.3), python3 (<< 3.12), python3 (>= 3.11~), python3:any
Section: python
Priority: optional
Homepage: https://github.com/lh3/minimap2
Description: Python3 interface minimap2
Minimap2 is a versatile sequence alignment program that aligns DNA or
mRNA sequences against a large reference database. Typical use cases
include: (1) mapping PacBio or Oxford Nanopore genomic reads to the
human genome; (2) finding overlaps between long reads with error rate up
to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA
or Direct RNA reads against a reference genome; (4) aligning Illumina
single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full-
genome alignment between two closely related species with divergence
below ~15%.
.
This package contains the Python3 interface for using minimap2.
drwxr-xr-x root/root 0 2022-11-30 19:52 ./
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/bin/
-rwxr-xr-x root/root 1341 2022-11-30 19:52 ./usr/bin/minimap2.py
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/python3/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/lib/python3/dist-packages/mappy-2.24.egg-info/
-rw-r--r-- root/root 7111 2022-11-30 19:52 ./usr/lib/python3/dist-packages/mappy-2.24.egg-info/PKG-INFO
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-rw-r--r-- root/root 6 2022-11-30 19:52 ./usr/lib/python3/dist-packages/mappy-2.24.egg-info/top_level.txt
-rw-r--r-- root/root 334716 2022-11-30 19:52 ./usr/lib/python3/dist-packages/mappy.cpython-311-arm-linux-gnueabihf.so
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/doc/
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-rw-r--r-- root/root 3132 2022-11-30 19:52 ./usr/share/doc/python3-mappy/copyright
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/lintian/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 124 2022-11-30 19:52 ./usr/share/lintian/overrides/python3-mappy
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/man/
drwxr-xr-x root/root 0 2022-11-30 19:52 ./usr/share/man/man1/
-rw-r--r-- root/root 460 2022-11-30 19:52 ./usr/share/man/man1/minimap2.py.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 14060
Build-Time: 348
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 2383
Job: minimap2_2.24+dfsg-3
Machine Architecture: armhf
Package: minimap2
Package-Time: 2786
Source-Version: 2.24+dfsg-3
Space: 14060
Status: successful
Version: 2.24+dfsg-3+b1
--------------------------------------------------------------------------------
Finished at 2023-02-01T07:33:58Z
Build needed 00:46:26, 14060k disc space