lme4 →
1.1-20-3 →
armhf → 2019-02-24 06:49:03
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-01
+==============================================================================+
| lme4 1.1-20-3 (armhf) Sun, 24 Feb 2019 06:22:52 +0000 |
+==============================================================================+
Package: lme4
Version: 1.1-20-3
Source Version: 1.1-20-3
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/buster-staging-armhf-sbuild-83ec591f-2ee1-4028-bfc8-8c1651633a71' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.4 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.1 MB]
Fetched 24.4 MB in 32s (756 kB/s)
Reading package lists...
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'lme4' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/edd/r-cran-lme4.git
Please use:
git clone https://salsa.debian.org/edd/r-cran-lme4.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 4130 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main lme4 1.1-20-3 (dsc) [1944 B]
Get:2 http://172.17.0.1/private buster-staging/main lme4 1.1-20-3 (tar) [4123 kB]
Get:3 http://172.17.0.1/private buster-staging/main lme4 1.1-20-3 (diff) [5296 B]
Fetched 4130 kB in 1s (7111 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/lme4-DzibF9/lme4-1.1-20' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/lme4-DzibF9' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-NceonC/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-NceonC/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-NceonC/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (3072 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-NceonC/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates e2fsprogs-l10n krb5-locales libgpg-error-l10n
libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
libsasl2-modules openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (47.9 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15640 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 10), dh-r, r-base-dev (>= 3.5.2), r-cran-matrix (>= 1.1-0), r-cran-lattice, r-cran-nlme, r-cran-mass, r-cran-rcppeigen (>= 0.3.2.0.2-2), r-cran-minqa (>= 1.2.2-2), r-cran-nloptr
Filtered Build-Depends: debhelper (>= 10), dh-r, r-base-dev (>= 3.5.2), r-cran-matrix (>= 1.1-0), r-cran-lattice, r-cran-nlme, r-cran-mass, r-cran-rcppeigen (>= 0.3.2.0.2-2), r-cran-minqa (>= 1.2.2-2), r-cran-nloptr
dpkg-deb: building package 'sbuild-build-depends-lme4-dummy' in '/<<BUILDDIR>>/resolver-NceonC/apt_archive/sbuild-build-depends-lme4-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-lme4-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Sources [563 B]
Get:5 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Packages [645 B]
Fetched 2541 B in 1s (3758 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-NceonC/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...
Install lme4 build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
e2fsprogs-l10n krb5-locales libgpg-error-l10n libsasl2-modules
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper
dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core gcc-7-base gettext gettext-base gfortran
gfortran-8 groff-base icu-devtools intltool-debian libarchive-zip-perl
libblas-dev libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl4
libdatrie1 libelf1 libexpat1 libfile-stripnondeterminism-perl
libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgfortran-8-dev
libgfortran4 libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libice6
libicu-dev libicu63 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
liblapack-dev liblapack3 liblzma-dev libmagic-mgc libmagic1 libncurses-dev
libncurses5-dev libnghttp2-14 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre3-dev
libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libswitch-perl
libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtool libuchardet0
libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1
libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6
littler m4 man-db pkg-config po-debconf r-base-core r-base-dev
r-cran-lattice r-cran-littler r-cran-mass r-cran-matrix r-cran-minqa
r-cran-nlme r-cran-nloptr r-cran-pkgkitten r-cran-rcpp r-cran-rcppeigen ucf
unzip x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation debtags dh-make gettext-doc libasprintf-dev libgettextpo-dev
gfortran-doc gfortran-8-doc libgfortran5-dbg libcoarrays-dev groff
liblapack-doc icu-doc liblzma-doc ncurses-doc readline-doc tcl8.6 tk8.6
libtool-doc gcj-jdk m4-doc apparmor less www-browser libmail-box-perl ess
r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
r-cran-getopt r-cran-inline
Recommended packages:
devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs libpng-tools publicsuffix libltdl-dev
libmail-sendmail-perl r-recommended r-doc-html libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper
dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core gcc-7-base gettext gettext-base gfortran
gfortran-8 groff-base icu-devtools intltool-debian libarchive-zip-perl
libblas-dev libblas3 libbsd0 libbz2-dev libcairo2 libcroco3 libcurl4
libdatrie1 libelf1 libexpat1 libfile-stripnondeterminism-perl
libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgfortran-8-dev
libgfortran4 libgfortran5 libglib2.0-0 libgraphite2-3 libharfbuzz0b libice6
libicu-dev libicu63 libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev
liblapack-dev liblapack3 liblzma-dev libmagic-mgc libmagic1 libncurses-dev
libncurses5-dev libnghttp2-14 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre3-dev
libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libswitch-perl
libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtool libuchardet0
libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1
libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6
littler m4 man-db pkg-config po-debconf r-base-core r-base-dev
r-cran-lattice r-cran-littler r-cran-mass r-cran-matrix r-cran-minqa
r-cran-nlme r-cran-nloptr r-cran-pkgkitten r-cran-rcpp r-cran-rcppeigen
sbuild-build-depends-lme4-dummy ucf unzip x11-common xauth xdg-utils zip
zlib1g-dev
0 upgraded, 127 newly installed, 0 to remove and 0 not upgraded.
Need to get 88.4 MB/88.6 MB of archives.
After this operation, 250 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-NceonC/apt_archive ./ sbuild-build-depends-lme4-dummy 0.invalid.0 [932 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.4-2 [782 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.1-2 [26.6 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.5-2 [1230 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.35-2 [242 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.35-2 [109 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.35-2 [65.1 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-9 [547 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.1.1-1 [19.7 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.1.1-1 [13.0 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.175-2 [157 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-3 [66.0 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.3-1 [1077 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-6 [7973 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-3 [132 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf debhelper all 12.1 [1015 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf unzip armhf 6.0-22 [150 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.26 [20.0 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.26 [17.5 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libgfortran5 armhf 8.2.0-20+rpi1 [206 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-2 [103 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libexpat1 armhf 2.2.6-1 [76.8 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.9.1-3 [318 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13.1-2 [99.3 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.16.0-2 [602 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.36.0-2 [73.6 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [54.0 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-2 [125 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libcurl4 armhf 7.64.0-1 [292 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf x11-common all 1:7.7+19 [251 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-2 [1493 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libfribidi0 armhf 1.0.5-3.1 [62.1 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.28-2 [170 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.12-2 [35.9 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.28-2 [50.9 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.42.4-6 [168 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.13-7 [69.6 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 2.3.1-1 [1144 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-6 [61.9 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-6 [51.6 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libtcl8.6 armhf 8.6.9+dfsg-1 [878 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.10-4 [236 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libtk8.6 armhf 8.6.9-1 [666 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libxt6 armhf 1:1.1.5-1 [155 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf r-base-core armhf 3.5.2-1 [23.6 MB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libgfortran-8-dev armhf 8.2.0-20+rpi1 [248 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf gfortran-8 armhf 8.2.0-20+rpi1 [7202 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf gfortran armhf 4:8.2.0-2+rpi1 [1432 B]
Get:91 http://172.17.0.1/private buster-staging/main armhf libblas-dev armhf 3.8.0-2 [113 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf liblapack-dev armhf 3.8.0-2 [1551 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libncurses-dev armhf 6.1+20181013-2 [278 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libncurses5-dev armhf 6.1+20181013-2 [940 B]
Get:95 http://172.17.0.1/private buster-staging/main armhf libreadline-dev armhf 7.0-5 [110 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libpcre16-3 armhf 2:8.39-11+rpi1 [234 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libpcre32-3 armhf 2:8.39-11+rpi1 [227 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libpcrecpp0v5 armhf 2:8.39-11+rpi1 [150 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf libpcre3-dev armhf 2:8.39-11+rpi1 [565 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libpng-dev armhf 1.6.36-5 [281 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libbz2-dev armhf 1.0.6-9 [27.7 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 63.1-6 [163 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 63.1-6 [8841 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf libxmuu1 armhf 2:1.1.2-2 [23.0 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf pkg-config armhf 0.29-6 [59.8 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf r-base-dev all 3.5.2-1 [4480 B]
Get:112 http://172.17.0.1/private buster-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf dh-r all 20190121 [35.1 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.3.0-19 [191 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf libnlopt0 armhf 2.4.2+dfsg-8+b1 [133 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf r-cran-littler armhf 0.3.6-1 [304 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf littler all 0.3.6-1 [13.6 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf r-cran-lattice armhf 0.20-38-1 [1120 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf r-cran-mass armhf 7.3-51.1-1 [1103 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf r-cran-matrix armhf 1.2-15-1 [3356 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf r-cran-pkgkitten all 0.1.4-2 [22.4 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf r-cran-rcpp armhf 1.0.0-1+b1 [3356 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf r-cran-minqa armhf 1.2.4-1+b1 [101 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf r-cran-nlme armhf 3.1.137-1+b1 [2202 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf r-cran-nloptr armhf 1.2.1-1 [279 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf r-cran-rcppeigen armhf 0.3.3.5.0-1 [1333 kB]
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Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libarchive-zip-perl (1.64-1) ...
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Setting up libsigsegv2:armhf (2.12-2) ...
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No schema files found: doing nothing.
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Setting up gettext-base (0.19.8.1-9) ...
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Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2) ...
Setting up libswitch-perl (2.17-2) ...
Setting up m4 (1.4.18-2) ...
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Setting up libxml2:armhf (2.9.4+dfsg1-7+b1) ...
Setting up zip (3.0-11) ...
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Setting up gcc-7-base:armhf (7.3.0-19) ...
Setting up pkg-config (0.29-6) ...
Setting up libpixman-1-0:armhf (0.36.0-1) ...
Setting up libssh2-1:armhf (1.8.0-2) ...
Processing triggers for libc-bin (2.28-6+rpi1) ...
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Setting up autotools-dev (20180224.1) ...
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Setting up libfribidi0:armhf (1.0.5-3.1) ...
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Setting up libpcre32-3:armhf (2:8.39-11+rpi1) ...
Setting up icu-devtools (63.1-6) ...
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Setting up libtcl8.6:armhf (8.6.9+dfsg-1) ...
Setting up libthai-data (0.1.28-2) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up liblzma-dev:armhf (5.2.4-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
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Setting up libgfortran5:armhf (8.2.0-20+rpi1) ...
Setting up libx11-data (2:1.6.7-1) ...
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Setting up libfile-stripnondeterminism-perl (1.1.1-1) ...
Setting up libpaper1:armhf (1.1.26) ...
Creating config file /etc/papersize with new version
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Setting up libpcre3-dev:armhf (2:8.39-11+rpi1) ...
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Setting up gettext (0.19.8.1-9) ...
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Setting up libcurl4:armhf (7.64.0-1) ...
Setting up libharfbuzz0b:armhf (2.3.1-1) ...
Setting up libtiff5:armhf (4.0.10-4) ...
Setting up autoconf (2.69-11) ...
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Setting up file (1:5.35-2) ...
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Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libblas3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libreadline-dev:armhf (7.0-5) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up man-db (2.8.5-2) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink /etc/systemd/system/timers.target.wants/man-db.timer -> /lib/systemd/system/man-db.timer.
Setting up libpng-dev:armhf (1.6.36-5) ...
Setting up libgfortran-8-dev:armhf (8.2.0-20+rpi1) ...
Setting up libxcb1:armhf (1.13.1-2) ...
Setting up libtool (2.4.6-9) ...
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxcb-render0:armhf (1.13.1-2) ...
Setting up po-debconf (1.0.21) ...
Setting up libblas-dev:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up gfortran-8 (8.2.0-20+rpi1) ...
Setting up liblapack3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libx11-6:armhf (2:1.6.7-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2) ...
Setting up libxcb-shm0:armhf (1.13.1-2) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libxft2:armhf (2.3.2-2) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up liblapack-dev:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up gfortran (4:8.2.0-2+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libpango-1.0-0:armhf (1.42.4-6) ...
Setting up libcairo2:armhf (1.16.0-2) ...
Setting up libtk8.6:armhf (8.6.9-1) ...
Setting up libpangoft2-1.0-0:armhf (1.42.4-6) ...
Setting up libpangocairo-1.0-0:armhf (1.42.4-6) ...
Setting up r-base-core (3.5.2-1) ...
Creating config file /etc/R/Renviron with new version
Setting up r-cran-littler (0.3.6-1) ...
Setting up littler (0.3.6-1) ...
Setting up r-base-dev (3.5.2-1) ...
Setting up r-cran-nloptr (1.2.1-1) ...
Setting up r-cran-pkgkitten (0.1.4-2) ...
Setting up r-cran-rcpp (1.0.0-1+b1) ...
Setting up r-cran-mass (7.3-51.1-1) ...
Setting up r-cran-lattice (0.20-38-1) ...
Setting up r-cran-nlme (3.1.137-1+b1) ...
Setting up r-cran-minqa (1.2.4-1+b1) ...
Setting up r-cran-matrix (1.2-15-1) ...
Setting up r-cran-rcppeigen (0.3.3.5.0-1) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (1.1.1-1) ...
Setting up debhelper (12.1) ...
Setting up dh-r (20190121) ...
Setting up sbuild-build-depends-lme4-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.28-6+rpi1) ...
Processing triggers for systemd (240-5+rpi1) ...
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-11+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-20+rpi1 gcc-8_8.2.0-20+rpi1 libc6-dev_2.28-6+rpi1 libstdc++-8-dev_8.2.0-20+rpi1 libstdc++6_8.2.0-20+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 apt_1.8.0~rc3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-11+rpi1 binutils-arm-linux-gnueabihf_2.31.1-11+rpi1 binutils-common_2.31.1-11+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20190110 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-20+rpi1 dash_0.5.10.2-5 dctrl-tools_2.24-3 debconf_1.5.70 debhelper_12.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-r_20190121 dh-strip-nondeterminism_1.1.1-1 diffutils_1:3.6-1 dirmngr_2.2.12-1+rpi1 dmsetup_2:1.02.155-2 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 e2fsprogs-l10n_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-2 findutils_4.6.0+git+20190105-2 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-20+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-7-base_7.3.0-19 gcc-8_8.2.0-20+rpi1 gcc-8-base_8.2.0-20+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gfortran_4:8.2.0-2+rpi1 gfortran-8_8.2.0-20+rpi1 gnupg_2.2.12-1+rpi1 gnupg-agent_2.2.12-1+rpi1 gnupg-l10n_2.2.12-1+rpi1 gnupg-utils_2.2.12-1+rpi1 gpg_2.2.12-1+rpi1 gpg-agent_2.2.12-1+rpi1 gpg-wks-client_2.2.12-1+rpi1 gpg-wks-server_2.2.12-1+rpi1 gpgconf_2.2.12-1+rpi1 gpgsm_2.2.12-1+rpi1 gpgv_2.2.12-1+rpi1 grep_3.3-1 groff-base_1.22.4-2 gzip_1.9-3 hostname_3.21 icu-devtools_63.1-6 inetutils-ping_2:1.9.4-5 init-system-helpers_1.56+nmu1 initramfs-tools_0.133 initramfs-tools-core_0.133 intltool-debian_0.35.0+20060710.5 klibc-utils_2.0.6-1+rpi1 kmod_26-1 krb5-locales_1.17-1 libacl1_2.2.52-3 libapparmor1_2.13.2-7 libapt-pkg5.0_1.8.0~rc3 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.2 libasan5_8.2.0-20+rpi1 libassuan0_2.5.2-1 libatomic1_8.2.0-20+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2+b1 libbinutils_2.31.1-11+rpi1 libblas-dev_3.8.0-2 libblas3_3.8.0-2 libblkid1_2.33.1-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libbz2-dev_1.0.6-9 libc-bin_2.28-6+rpi1 libc-dev-bin_2.28-6+rpi1 libc6_2.28-6+rpi1 libc6-dev_2.28-6+rpi1 libcairo2_1.16.0-2 libcap-ng0_0.7.9-2 libcap2_1:2.25-2 libcc1-0_8.2.0-20+rpi1 libcom-err2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.1.0-1 libcryptsetup4_2:1.7.5-1 libcurl4_7.64.0-1 libdatrie1_0.2.12-2 libdb5.3_5.3.28+dfsg1-0.3 libdbus-1-3_1.12.12-1 libdebconfclient0_0.247 libdevmapper1.02.1_2:1.02.155-2 libdpkg-perl_1.19.2 libdrm-common_2.4.97-1+rpi1 libdrm2_2.4.97-1+rpi1 libelf1_0.175-2 libexpat1_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.1.1-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-2 libfreetype6_2.9.1-3 libfribidi0_1.0.5-3.1 libgcc-8-dev_8.2.0-20+rpi1 libgcc1_1:8.2.0-20+rpi1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-2 libgdbm3_1.8.3-14 libgdbm6_1.18.1-2 libgfortran-8-dev_8.2.0-20+rpi1 libgfortran4_7.3.0-19 libgfortran5_8.2.0-20+rpi1 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-2 libgomp1_8.2.0-20+rpi1 libgpg-error-l10n_1.35-1 libgpg-error0_1.35-1 libgraphite2-3_1.3.13-7 libgssapi-krb5-2_1.17-1 libharfbuzz0b_2.3.1-1 libhogweed4_3.4.1-1 libice6_2:1.0.9-2 libicu-dev_63.1-6 libicu63_63.1-6 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libip4tc0_1.8.2-3 libisl19_0.20-2 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjson-c3_0.12.1+ds-2 libk5crypto3_1.17-1 libkeyutils1_1.6-2 libklibc_2.0.6-1+rpi1 libkmod2_26-1 libkrb5-3_1.17-1 libkrb5support0_1.17-1 libksba8_1.3.5-2 liblapack-dev_3.8.0-2 liblapack3_3.8.0-2 libldap-2.4-2_2.4.47+dfsg-3+rpi1 libldap-common_2.4.47+dfsg-3+rpi1 liblz4-1_1.8.3-1 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-2 libmagic1_1:5.35-2 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses-dev_6.1+20181013-2 libncurses5_6.1+20181013-2 libncurses5-dev_6.1+20181013-2 libncurses6_6.1+20181013-2 libncursesw5_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libnghttp2-14_1.36.0-2 libnlopt0_2.4.2+dfsg-8+b1 libnpth0_1.6-1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-4 libpam-modules-bin_1.1.8-4 libpam-runtime_1.1.8-4 libpam0g_1.1.8-4 libpango-1.0-0_1.42.4-6 libpangocairo-1.0-0_1.42.4-6 libpangoft2-1.0-0_1.42.4-6 libpaper-utils_1.1.26 libpaper1_1.1.26 libpcre16-3_2:8.39-11+rpi1 libpcre3_2:8.39-11+rpi1 libpcre3-dev_2:8.39-11+rpi1 libpcre32-3_2:8.39-11+rpi1 libpcrecpp0v5_2:8.39-11+rpi1 libperl5.24_5.24.1-7 libperl5.28_5.28.1-4 libpipeline1_1.5.1-2 libpixman-1-0_0.36.0-1 libplymouth4_0.9.4-1 libpng-dev_1.6.36-5 libpng16-16_1.6.36-5 libprocps7_2:3.3.15-2 libpsl5_0.20.2-2 libreadline-dev_7.0-5 libreadline7_7.0-5 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.33.1-0.1 libsqlite3-0_3.26.0+fossilbc891ac6b-2 libss2_1.44.5-1 libssh2-1_1.8.0-2 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-20+rpi1 libstdc++6_8.2.0-20+rpi1 libswitch-perl_2.17-2 libsystemd0_240-5+rpi1 libtasn1-6_4.13-3 libtcl8.6_8.6.9+dfsg-1 libthai-data_0.1.28-2 libthai0_0.1.28-2 libtiff5_4.0.10-4 libtinfo5_6.1+20181013-2 libtinfo6_6.1+20181013-2 libtk8.6_8.6.9-1 libtool_2.4.6-9 libubsan1_8.2.0-20+rpi1 libuchardet0_0.0.6-3 libudev1_240-5+rpi1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.33.1-0.1 libwebp6_0.6.1-2 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxau6_1:1.0.8-1+b2 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.4+dfsg1-7+b1 libxmuu1_2:1.1.2-2 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.1.5-1 libzstd1_1.3.8+dfsg-3+rpi1 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 littler_0.3.6-1 login_1:4.5-1.1 lsb-base_10.2018112800+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.5-2 mawk_1.3.3-17 mount_2.33.1-0.1 multiarch-support_2.28-6+rpi1 nano_3.2-1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 netbase_5.6 openssl_1.1.1a-1 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.24_5.24.1-7 perl-modules-5.28_5.28.1-4 pinentry-curses_1.1.0-1 pkg-config_0.29-6 plymouth_0.9.4-1 po-debconf_1.0.21 procps_2:3.3.15-2 r-base-core_3.5.2-1 r-base-dev_3.5.2-1 r-cran-lattice_0.20-38-1 r-cran-littler_0.3.6-1 r-cran-mass_7.3-51.1-1 r-cran-matrix_1.2-15-1 r-cran-minqa_1.2.4-1+b1 r-cran-nlme_3.1.137-1+b1 r-cran-nloptr_1.2.1-1 r-cran-pkgkitten_0.1.4-2 r-cran-rcpp_1.0.0-1+b1 r-cran-rcppeigen_0.3.3.5.0-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-lme4-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_240-5+rpi1 sysvinit-utils_2.93-6 tar_1.30+dfsg-5 tzdata_2018i-1 ucf_3.0038+nmu1 udev_240-5+rpi1 unzip_6.0-22 util-linux_2.33.1-0.1 x11-common_1:7.7+19 xauth_1:1.0.10-1 xdg-utils_1.1.3-1 xz-utils_5.2.4-1 zip_3.0-11 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Wed Feb 13 15:08:11 2019 UTC
gpgv: using RSA key A1489FE2AB99A21A
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./lme4_1.1-20-3.dsc
dpkg-source: info: extracting lme4 in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking lme4_1.1-20.orig.tar.gz
dpkg-source: info: unpacking lme4_1.1-20-3.debian.tar.xz
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-83ec591f-2ee1-4028-bfc8-8c1651633a71
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package lme4
dpkg-buildpackage: info: source version 1.1-20-3
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules build-arch
dh build-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
fakeroot debian/rules binary-arch
dh binary-arch --buildsystem R
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_auto_install -a -O--buildsystem=R
I: R Package: lme4 Version: 1.1-20
I: Building using R version 3.5.2-1
I: R API version: r-api-3.5
I: Using built-time from d/changelog: Wed, 13 Feb 2019 09:00:19 -0600
mkdir -p /<<PKGBUILDDIR>>/debian/r-cran-lme4/usr/lib/R/site-library
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-lme4/usr/lib/R/site-library --clean . "--built-timestamp='Wed, 13 Feb 2019 09:00:19 -0600'"
* installing *source* package 'lme4' ...
** package 'lme4' successfully unpacked and MD5 sums checked
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
g++ -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/Rcpp/include" -I"/usr/lib/R/site-library/RcppEigen/include" -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fdebug-prefix-map=/build/r-base-xoRi9J/r-base-3.5.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c external.cpp -o external.o
g++ -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/Rcpp/include" -I"/usr/lib/R/site-library/RcppEigen/include" -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fdebug-prefix-map=/build/r-base-xoRi9J/r-base-3.5.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c glmFamily.cpp -o glmFamily.o
g++ -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/Rcpp/include" -I"/usr/lib/R/site-library/RcppEigen/include" -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fdebug-prefix-map=/build/r-base-xoRi9J/r-base-3.5.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c optimizer.cpp -o optimizer.o
g++ -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/Rcpp/include" -I"/usr/lib/R/site-library/RcppEigen/include" -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fdebug-prefix-map=/build/r-base-xoRi9J/r-base-3.5.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c predModule.cpp -o predModule.o
g++ -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/Rcpp/include" -I"/usr/lib/R/site-library/RcppEigen/include" -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fdebug-prefix-map=/build/r-base-xoRi9J/r-base-3.5.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c respModule.cpp -o respModule.o
g++ -shared -L/usr/lib/R/lib -Wl,-z,relro -o lme4.so external.o glmFamily.o optimizer.o predModule.o respModule.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-cran-lme4/usr/lib/R/site-library/lme4/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
code for methods in class "merPredD" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "lmResp" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "lmerResp" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "glmResp" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "nlsResp" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "glmFamily" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "golden" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "NelderMead" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "rePos" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "vcRep" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (lme4)
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 292.
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 293.
Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 296.
W: Ignoring specified R dependency: R (>= 3.2.0)
I: Using r-cran-matrix for Depends:Matrix (>= 1.2-1)
I: Using r-cran-knitr for Suggests:knitr
I: Using r-cran-boot for Suggests:boot
W: Cannot find a debian package for Suggests:PKPDmodels
W: Cannot find a debian package for Suggests:MEMSS
I: Using r-cran-testthat for Suggests:testthat (>= 0.8.1)
I: Using r-cran-ggplot2 for Suggests:ggplot2
I: Using r-cran-mlmrev for Suggests:mlmRev
W: Cannot find a debian package for Suggests:optimx (>= 2013.8.6)
W: Cannot find a debian package for Suggests:gamm4
I: Using r-cran-pbkrtest for Suggests:pbkrtest
W: Cannot find a debian package for Suggests:HSAUR2
I: Using r-cran-numderiv for Suggests:numDeriv
I: Using r-cran-car for Suggests:car
W: Cannot find a debian package for Suggests:dfoptim
I: Using r-cran-mass for Imports:MASS
I: Using r-cran-lattice for Imports:lattice
I: Using r-cran-nlme for Imports:nlme (>= 3.1-123)
I: Using r-cran-minqa for Imports:minqa (>= 1.1.15)
I: Using r-cran-nloptr for Imports:nloptr (>= 1.0.4)
Create lintian-override for package-contains-documentation-outside-usr-share-doc due to debian/r-cran-lme4/usr/lib/R/site-library/lme4/doc/lme4/inst/doc/lmerperf.Rmd
dh_installdocs -a -O--buildsystem=R
dh_installchangelogs -a -O--buildsystem=R
dh_installinit -a -O--buildsystem=R
dh_lintian -a -O--buildsystem=R
dh_perl -a -O--buildsystem=R
dh_link -a -O--buildsystem=R
dh_strip_nondeterminism -a -O--buildsystem=R
dh_compress -a -O--buildsystem=R
dh_fixperms -a -O--buildsystem=R
dh_missing -a -O--buildsystem=R
dh_strip -a -O--buildsystem=R
dh_makeshlibs -a -O--buildsystem=R
dh_shlibdeps -a -O--buildsystem=R
dh_installdeb -a -O--buildsystem=R
dh_gencontrol -a -O--buildsystem=R
dpkg-gencontrol: warning: package r-cran-lme4: substitution variable ${R:Suggests} unused, but is defined
dpkg-gencontrol: warning: package r-cran-lme4: substitution variable ${R:Suggests} unused, but is defined
dh_md5sums -a -O--buildsystem=R
dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-cran-lme4' in '../r-cran-lme4_1.1-20-3_armhf.deb'.
dpkg-deb: building package 'r-cran-lme4-dbgsym' in '../r-cran-lme4-dbgsym_1.1-20-3_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../lme4_1.1-20-3_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-02-24T06:48:54Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
lme4_1.1-20-3_armhf.changes:
----------------------------
Format: 1.8
Date: Wed, 13 Feb 2019 09:00:19 -0600
Source: lme4
Binary: r-cran-lme4
Architecture: armhf
Version: 1.1-20-3
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Dirk Eddelbuettel <edd@debian.org>
Description:
r-cran-lme4 - GNU R package for linear mixed effects model fitting
Closes: 922198
Changes:
lme4 (1.1-20-3) unstable; urgency=medium
.
* debian/control: Added Breaks: (in correct position) for two affected
downstream packages to ensure matching versions are auto-tested.
(Closes: #922198)
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Files:
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51a294a03da9a01aee2eb9a196c190ab 4326768 debug optional r-cran-lme4-dbgsym_1.1-20-3_armhf.deb
2fc202a530f9fe4ab71c54b2dc413a91 4911276 gnu-r optional r-cran-lme4_1.1-20-3_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
r-cran-lme4-dbgsym_1.1-20-3_armhf.deb
-------------------------------------
new Debian package, version 2.0.
size 4326768 bytes: control archive=520 bytes.
344 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: r-cran-lme4-dbgsym
Source: lme4
Version: 1.1-20-3
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Installed-Size: 4334
Depends: r-cran-lme4 (= 1.1-20-3)
Section: debug
Priority: optional
Description: debug symbols for r-cran-lme4
Build-Ids: 3212cc326fed2a2ea64fd583d354e12a5223dc7f
drwxr-xr-x root/root 0 2019-02-13 15:00 ./
drwxr-xr-x root/root 0 2019-02-13 15:00 ./usr/
drwxr-xr-x root/root 0 2019-02-13 15:00 ./usr/lib/
drwxr-xr-x root/root 0 2019-02-13 15:00 ./usr/lib/debug/
drwxr-xr-x root/root 0 2019-02-13 15:00 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2019-02-13 15:00 ./usr/lib/debug/.build-id/32/
-rw-r--r-- root/root 4427352 2019-02-13 15:00 ./usr/lib/debug/.build-id/32/12cc326fed2a2ea64fd583d354e12a5223dc7f.debug
drwxr-xr-x root/root 0 2019-02-13 15:00 ./usr/share/
drwxr-xr-x root/root 0 2019-02-13 15:00 ./usr/share/doc/
lrwxrwxrwx root/root 0 2019-02-13 15:00 ./usr/share/doc/r-cran-lme4-dbgsym -> r-cran-lme4
r-cran-lme4_1.1-20-3_armhf.deb
------------------------------
new Debian package, version 2.0.
size 4911276 bytes: control archive=3236 bytes.
858 bytes, 16 lines control
7491 bytes, 91 lines md5sums
Package: r-cran-lme4
Source: lme4
Version: 1.1-20-3
Architecture: armhf
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Installed-Size: 6768
Depends: libc6 (>= 2.23), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2), r-base-core (>= 3.5.2-1), r-api-3.5, r-cran-matrix (>= 1.2-1), r-cran-mass, r-cran-lattice, r-cran-nlme (>= 3.1-123), r-cran-minqa (>= 1.2.2-2), r-cran-nloptr (>= 1.0.4), r-cran-rcppeigen (>= 0.3.2.0.2-2)
Breaks: r-cran-lmertest (<< 3.1-0-1~), r-cran-mlmrev (<< 1.0-7-1~)
Section: gnu-r
Priority: optional
Homepage: https://cran.r-project.org/package=lme4
Description: GNU R package for linear mixed effects model fitting
This CRAN package provides S4 classes and methods for fitting and
examining linear mixed effects models (also called multilevel models,
panel data models, and several other names) and generalized linear
mixed effects models.
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-rw-r--r-- root/root 661327 2019-02-13 15:00 ./usr/lib/R/site-library/lme4/R/sysdata.rdb
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-rw-r--r-- root/root 249941 2019-02-13 15:00 ./usr/lib/R/site-library/lme4/data/Rdata.rdb
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-rw-r--r-- root/root 317 2019-02-13 15:00 ./usr/lib/R/site-library/lme4/data/Rdata.rdx
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-rw-r--r-- root/root 3217 2019-02-13 15:00 ./usr/lib/R/site-library/lme4/doc/index.html
-rw-r--r-- root/root 355186 2019-02-13 15:00 ./usr/lib/R/site-library/lme4/doc/lme4-extras.pdf
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-rw-r--r-- root/root 1412 2019-02-07 22:16 ./usr/share/doc/r-cran-lme4/copyright
drwxr-xr-x root/root 0 2019-02-13 15:00 ./usr/share/lintian/
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-rw-r--r-- root/root 3361 2019-02-07 22:16 ./usr/share/lintian/overrides/r-cran-lme4
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| Post Build |
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+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 27516
Build-Time: 685
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 813
Job: lme4_1.1-20-3
Machine Architecture: armhf
Package: lme4
Package-Time: 1562
Source-Version: 1.1-20-3
Space: 27516
Status: successful
Version: 1.1-20-3
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Finished at 2019-02-24T06:48:54Z
Build needed 00:26:02, 27516k disc space