lme4 →
1.1-19-1 →
armhf → 2018-11-20 05:42:37
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| lme4 1.1-19-1 (armhf) Tue, 20 Nov 2018 05:32:13 +0000 |
+==============================================================================+
Package: lme4
Version: 1.1-19-1
Source Version: 1.1-19-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-ea1b39a6-332d-42dc-9e6b-d7b12dbbf9c0' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.2 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.9 MB]
Fetched 24.1 MB in 9s (2692 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'lme4' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/edd/r-cran-lme4.git
Please use:
git clone https://salsa.debian.org/edd/r-cran-lme4.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 4127 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main lme4 1.1-19-1 (dsc) [1944 B]
Get:2 http://172.17.0.1/private buster-staging/main lme4 1.1-19-1 (tar) [4120 kB]
Get:3 http://172.17.0.1/private buster-staging/main lme4 1.1-19-1 (diff) [5168 B]
Fetched 4127 kB in 1s (6551 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/lme4-VAvA7a/lme4-1.1-19' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/lme4-VAvA7a' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-SFdm0U/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-SFdm0U/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-SFdm0U/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ Packages [431 B]
Fetched 2107 B in 0s (10.9 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales libexpat1
libgpg-error-l10n libnss-systemd libpam-systemd libperl5.26 libssl1.1
openssl perl-modules-5.26 systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 1 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 17617 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 10), dh-r, r-base-dev (>= 3.5.1), r-cran-matrix (>= 1.1-0), r-cran-lattice, r-cran-nlme, r-cran-mass, r-cran-rcppeigen (>= 0.3.2.0.2-2), r-cran-minqa (>= 1.2.2-2), r-cran-nloptr
Filtered Build-Depends: debhelper (>= 10), dh-r, r-base-dev (>= 3.5.1), r-cran-matrix (>= 1.1-0), r-cran-lattice, r-cran-nlme, r-cran-mass, r-cran-rcppeigen (>= 0.3.2.0.2-2), r-cran-minqa (>= 1.2.2-2), r-cran-nloptr
dpkg-deb: building package 'sbuild-build-depends-lme4-dummy' in '/<<BUILDDIR>>/resolver-SFdm0U/apt_archive/sbuild-build-depends-lme4-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-lme4-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ Sources [564 B]
Get:5 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ Packages [647 B]
Fetched 2544 B in 0s (13.1 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install lme4 build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
dbus dbus-user-session e2fsprogs-l10n krb5-locales libgpg-error-l10n
libnss-systemd libpam-systemd libperl5.26 perl-modules-5.26 systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper
dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core gcc-7-base gettext gettext-base gfortran
gfortran-8 gir1.2-glib-2.0 gir1.2-harfbuzz-0.0 groff-base icu-devtools
intltool-debian libarchive-zip-perl libblas-dev libblas3 libbsd0 libbz2-dev
libcairo2 libcroco3 libcurl4 libdatrie1 libelf1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgfortran-8-dev libgfortran4 libgfortran5
libgirepository-1.0-1 libglib2.0-0 libglib2.0-bin libglib2.0-data
libglib2.0-dev libglib2.0-dev-bin libgraphite2-3 libgraphite2-dev
libharfbuzz-dev libharfbuzz-gobject0 libharfbuzz-icu0 libharfbuzz0b libice6
libicu-dev libicu-le-hb-dev libicu-le-hb0 libicu63 libiculx63 libjbig0
libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev liblapack-dev liblapack3
liblzma-dev libmagic-mgc libmagic1 libmpdec2 libncurses-dev libncurses5-dev
libnghttp2-14 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
libpaper-utils libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5
libpipeline1 libpixman-1-0 libpng-dev libpsl5 libpython3-stdlib
libpython3.6-minimal libpython3.6-stdlib libreadline-dev librtmp1
libsigsegv2 libsm6 libssh2-1 libswitch-perl libtcl8.6 libthai-data libthai0
libtiff5 libtk8.6 libtool libwebp6 libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db mime-support
pkg-config po-debconf python3 python3-distutils python3-lib2to3
python3-minimal python3.6 python3.6-minimal r-base-core r-base-dev
r-cran-lattice r-cran-littler r-cran-mass r-cran-matrix r-cran-minqa
r-cran-nlme r-cran-nloptr r-cran-pkgkitten r-cran-rcpp r-cran-rcppeigen ucf
unzip x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation debtags dh-make gettext-doc libasprintf-dev libgettextpo-dev
gfortran-doc gfortran-8-doc libgfortran5-dbg libcoarrays-dev groff
liblapack-doc libglib2.0-doc libgdk-pixbuf2.0-bin | libgdk-pixbuf2.0-dev
libxml2-utils libgraphite2-utils icu-doc liblzma-doc ncurses-doc
readline-doc tcl8.6 tk8.6 libtool-doc gcj-jdk m4-doc apparmor less
www-browser libmail-box-perl python3-doc python3-tk python3-venv
python3.6-venv python3.6-doc binfmt-support ess r-doc-info | r-doc-pdf
r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
r-cran-getopt r-cran-inline
Recommended packages:
devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl
shared-mime-info xdg-user-dirs libpng-tools publicsuffix libltdl-dev
libmail-sendmail-perl r-recommended r-doc-html libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper
dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core gcc-7-base gettext gettext-base gfortran
gfortran-8 gir1.2-glib-2.0 gir1.2-harfbuzz-0.0 groff-base icu-devtools
intltool-debian libarchive-zip-perl libblas-dev libblas3 libbsd0 libbz2-dev
libcairo2 libcroco3 libcurl4 libdatrie1 libelf1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgfortran-8-dev libgfortran4 libgfortran5
libgirepository-1.0-1 libglib2.0-0 libglib2.0-bin libglib2.0-data
libglib2.0-dev libglib2.0-dev-bin libgraphite2-3 libgraphite2-dev
libharfbuzz-dev libharfbuzz-gobject0 libharfbuzz-icu0 libharfbuzz0b libice6
libicu-dev libicu-le-hb-dev libicu-le-hb0 libicu63 libiculx63 libjbig0
libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev liblapack-dev liblapack3
liblzma-dev libmagic-mgc libmagic1 libmpdec2 libncurses-dev libncurses5-dev
libnghttp2-14 libnlopt0 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
libpaper-utils libpaper1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5
libpipeline1 libpixman-1-0 libpng-dev libpsl5 libpython3-stdlib
libpython3.6-minimal libpython3.6-stdlib libreadline-dev librtmp1
libsigsegv2 libsm6 libssh2-1 libswitch-perl libtcl8.6 libthai-data libthai0
libtiff5 libtk8.6 libtool libwebp6 libx11-6 libx11-data libxau6
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db mime-support
pkg-config po-debconf python3 python3-distutils python3-lib2to3
python3-minimal python3.6 python3.6-minimal r-base-core r-base-dev
r-cran-lattice r-cran-littler r-cran-mass r-cran-matrix r-cran-minqa
r-cran-nlme r-cran-nloptr r-cran-pkgkitten r-cran-rcpp r-cran-rcppeigen
sbuild-build-depends-lme4-dummy ucf unzip x11-common xauth xdg-utils zip
zlib1g-dev
0 upgraded, 150 newly installed, 0 to remove and 1 not upgraded.
Need to get 93.7 MB/97.7 MB of archives.
After this operation, 291 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-SFdm0U/apt_archive ./ sbuild-build-depends-lme4-dummy 0.invalid.0 [932 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-2 [25.1 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.4-3 [1160 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libpython3.6-minimal armhf 3.6.7-1 [567 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf python3.6-minimal armhf 3.6.7-1 [1380 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.6.7-1 [36.4 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.61 [37.1 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libpython3.6-stdlib armhf 3.6.7-1 [1639 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf python3.6 armhf 3.6.7-1 [240 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.6.7-1 [19.9 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.6.7-1 [61.4 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.34-2 [239 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.34-2 [107 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.34-2 [65.0 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-6 [547 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.45.0-1 [20.5 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.45.0-1 [12.4 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.170-0.5 [160 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-2 [67.4 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.1-2 [1051 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-4 [7974 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.5.3 [1002 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.24+nmu5 [20.8 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.24+nmu5 [17.2 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libgfortran5 armhf 8.2.0-9+rpi1 [205 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-1+b1 [104 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13.1-1 [132 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13.1-1 [108 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13.1-1 [99.2 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.16.0-1 [600 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.34.0-1 [73.4 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [54.0 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-2 [125 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libcurl4 armhf 7.61.0-1 [282 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-1+b1 [1493 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libfribidi0 armhf 1.0.5-3 [61.9 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.28-1 [170 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.12-1 [35.8 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.28-1 [50.9 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.42.4-4 [166 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.12-1 [69.1 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 2.1.1-1 [1014 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-4 [61.9 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-4 [51.5 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libtcl8.6 armhf 8.6.8+dfsg-4 [863 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.9+git181026-1 [229 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libtk8.6 armhf 8.6.8-4 [657 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf r-base-core armhf 3.5.1-1+b1 [23.6 MB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libgfortran-8-dev armhf 8.2.0-9+rpi1 [248 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf gfortran-8 armhf 8.2.0-9+rpi1 [5812 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf gfortran armhf 4:8.2.0-2+rpi1 [1432 B]
Get:81 http://172.17.0.1/private buster-staging/main armhf libblas-dev armhf 3.8.0-1+b1 [113 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf liblapack-dev armhf 3.8.0-1+b1 [1550 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libncurses-dev armhf 6.1+20181013-1 [278 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libncurses5-dev armhf 6.1+20181013-1 [940 B]
Get:85 http://172.17.0.1/private buster-staging/main armhf libreadline-dev armhf 7.0-5 [110 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libpcre16-3 armhf 2:8.39-11+rpi1 [234 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libpcre32-3 armhf 2:8.39-11+rpi1 [227 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libpcrecpp0v5 armhf 2:8.39-11+rpi1 [150 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libpcre3-dev armhf 2:8.39-11+rpi1 [565 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libpng-dev armhf 1.6.34-2+rpi1 [275 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf libbz2-dev armhf 1.0.6-9 [27.7 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libicu-le-hb0 armhf 1.0.3+git180724-3 [12.9 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libiculx63 armhf 63.1-4 [26.3 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 63.1-4 [166 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-icu0 armhf 2.1.1-1 [741 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-gobject0 armhf 2.1.1-1 [749 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libgirepository-1.0-1 armhf 1.58.0-1 [78.2 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf gir1.2-glib-2.0 armhf 1.58.0-1 [143 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf gir1.2-harfbuzz-0.0 armhf 2.1.1-1 [757 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf libglib2.0-data all 2.58.1-2 [1105 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libglib2.0-bin armhf 2.58.1-2 [114 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.7.1-1 [78.7 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.7.1-1 [144 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libglib2.0-dev-bin armhf 2.58.1-2 [151 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libglib2.0-dev armhf 2.58.1-2 [1237 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libgraphite2-dev armhf 1.3.12-1 [22.6 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-dev armhf 2.1.1-1 [1099 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf libicu-le-hb-dev armhf 1.0.3+git180724-3 [28.5 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 63.1-4 [8865 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf libxmuu1 armhf 2:1.1.2-2 [23.0 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf r-base-dev all 3.5.1-1 [4476 B]
Get:114 http://172.17.0.1/private buster-staging/main armhf libfile-which-perl all 1.22-1 [14.6 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf dh-r all 20181101 [34.0 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.3.0-19 [191 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf libnlopt0 armhf 2.4.2+dfsg-8+b1 [133 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf r-cran-littler armhf 0.3.5-1+b1 [301 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf littler all 0.3.5-1 [13.4 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf r-cran-lattice armhf 0.20-38-1 [1120 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf r-cran-mass armhf 7.3-51.1-1 [1103 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf r-cran-matrix armhf 1.2-15-1 [3356 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf r-cran-pkgkitten all 0.1.4-2 [22.4 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf r-cran-rcpp armhf 1.0.0-1+b1 [3356 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf r-cran-minqa armhf 1.2.4-1+b1 [101 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf r-cran-nlme armhf 3.1.137-1+b1 [2202 kB]
Get:127 http://172.17.0.1/private buster-staging/main armhf r-cran-nloptr armhf 1.2.1-1 [279 kB]
Get:128 http://172.17.0.1/private buster-staging/main armhf r-cran-rcppeigen armhf 0.3.3.4.0-1+b1 [1329 kB]
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update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
Running in chroot, ignoring request.
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libicu-le-hb0:armhf (1.0.3+git180724-3) ...
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Regenerating fonts cache... done.
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Setting up gfortran (4:8.2.0-2+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libglib2.0-dev-bin (2.58.1-2) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libglib2.0-dev:armhf (2.58.1-2) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libpango-1.0-0:armhf (1.42.4-4) ...
Setting up libcairo2:armhf (1.16.0-1) ...
Setting up libtk8.6:armhf (8.6.8-4) ...
Setting up libpangoft2-1.0-0:armhf (1.42.4-4) ...
Setting up libpangocairo-1.0-0:armhf (1.42.4-4) ...
Setting up r-base-core (3.5.1-1+b1) ...
Creating config file /etc/R/Renviron with new version
Setting up r-cran-littler (0.3.5-1+b1) ...
Setting up littler (0.3.5-1) ...
Setting up r-cran-nloptr (1.2.1-1) ...
Setting up r-cran-pkgkitten (0.1.4-2) ...
Setting up r-cran-rcpp (1.0.0-1+b1) ...
Setting up r-cran-mass (7.3-51.1-1) ...
Setting up r-cran-lattice (0.20-38-1) ...
Setting up r-cran-nlme (3.1.137-1+b1) ...
Setting up r-cran-minqa (1.2.4-1+b1) ...
Setting up r-cran-matrix (1.2-15-1) ...
Setting up r-cran-rcppeigen (0.3.3.4.0-1+b1) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (0.45.0-1) ...
Setting up libharfbuzz-dev:armhf (2.1.1-1) ...
Setting up debhelper (11.5.3) ...
Setting up libicu-le-hb-dev:armhf (1.0.3+git180724-3) ...
Setting up libicu-dev (63.1-4) ...
Setting up r-base-dev (3.5.1-1) ...
Setting up dh-r (20181101) ...
Setting up sbuild-build-depends-lme4-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-8+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.4.0-124-generic armhf (armv8l)
Toolchain package versions: binutils_2.31.1-7+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-9+rpi1 gcc-8_8.2.0-9+rpi1 libc6-dev_2.27-8+rpi1 libstdc++-8-dev_8.2.0-9+rpi1 libstdc++6_8.2.0-9+rpi1 linux-libc-dev_4.18.10-2+rpi1+b1
Package versions: adduser_3.118 apt_1.8.0~alpha2 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-7+rpi1 binutils-arm-linux-gnueabihf_2.31.1-7+rpi1 binutils-common_2.31.1-7+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.32.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20170717 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-9+rpi1 dash_0.5.10.2-1 dbus_1.12.10-1 dbus-user-session_1.12.10-1 dctrl-tools_2.24-3 debconf_1.5.69 debhelper_11.5.3 debianutils_4.8.6 dh-autoreconf_19 dh-r_20181101 dh-strip-nondeterminism_0.45.0-1 diffutils_1:3.6-1 dirmngr_2.2.10-3+rpi1 dmsetup_2:1.02.145-4.1+b5 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-2 e2fslibs_1.44.4-2 e2fsprogs_1.44.4-2 e2fsprogs-l10n_1.44.4-2 fakeroot_1.23-1 fdisk_2.32.1-0.1 file_1:5.34-2 findutils_4.6.0+git+20181018-1 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-9+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-7-base_7.3.0-19 gcc-8_8.2.0-9+rpi1 gcc-8-base_8.2.0-9+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gfortran_4:8.2.0-2+rpi1 gfortran-8_8.2.0-9+rpi1 gir1.2-glib-2.0_1.58.0-1 gir1.2-harfbuzz-0.0_2.1.1-1 gnupg_2.2.10-3+rpi1 gnupg-agent_2.2.10-3+rpi1 gnupg-l10n_2.2.10-3+rpi1 gnupg-utils_2.2.10-3+rpi1 gpg_2.2.10-3+rpi1 gpg-agent_2.2.10-3+rpi1 gpg-wks-client_2.2.10-3+rpi1 gpg-wks-server_2.2.10-3+rpi1 gpgconf_2.2.10-3+rpi1 gpgsm_2.2.10-3+rpi1 gpgv_2.2.10-3+rpi1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.9-2.1 hostname_3.21 icu-devtools_63.1-4 inetutils-ping_2:1.9.4-5 init-system-helpers_1.55 initramfs-tools_0.132 initramfs-tools-core_0.132 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-14+rpi1 kmod_25-1 krb5-locales_1.16.1-1 libacl1_2.2.52-3 libapparmor1_2.13.1-3+b1 libapt-pkg5.0_1.8.0~alpha2 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.2.0-9+rpi1 libassuan0_2.5.1-2 libatomic1_8.2.0-9+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-7+rpi1 libblas-dev_3.8.0-1+b1 libblas3_3.8.0-1+b1 libblkid1_2.32.1-0.1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libbz2-dev_1.0.6-9 libc-bin_2.27-8+rpi1 libc-dev-bin_2.27-8+rpi1 libc6_2.27-8+rpi1 libc6-dev_2.27-8+rpi1 libcairo2_1.16.0-1 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-9+rpi1 libcom-err2_1.44.4-2 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.5-1 libcryptsetup4_2:1.7.5-1 libcurl4_7.61.0-1 libdatrie1_0.2.12-1 libdb5.3_5.3.28+dfsg1-0.2 libdbus-1-3_1.12.10-1 libdebconfclient0_0.245 libdevmapper1.02.1_2:1.02.145-4.1+b5 libdpkg-perl_1.19.2 libdrm-common_2.4.95-1+rpi1 libdrm2_2.4.95-1+rpi1 libelf1_0.170-0.5 libexpat1_2.2.6-1 libext2fs2_1.44.4-2 libfakeroot_1.23-1 libfdisk1_2.32.1-0.1 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.45.0-1 libfile-which-perl_1.22-1 libfontconfig1_2.13.1-2 libfreetype6_2.8.1-2 libfribidi0_1.0.5-3 libgcc-8-dev_8.2.0-9+rpi1 libgcc1_1:8.2.0-9+rpi1 libgcrypt20_1.8.4-3 libgdbm-compat4_1.18.1-1 libgdbm3_1.8.3-14 libgdbm6_1.18.1-1 libgfortran-8-dev_8.2.0-9+rpi1 libgfortran4_7.3.0-19 libgfortran5_8.2.0-9+rpi1 libgirepository-1.0-1_1.58.0-1 libglib2.0-0_2.58.1-2 libglib2.0-bin_2.58.1-2 libglib2.0-data_2.58.1-2 libglib2.0-dev_2.58.1-2 libglib2.0-dev-bin_2.58.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.19-1+b1 libgomp1_8.2.0-9+rpi1 libgpg-error-l10n_1.32-3 libgpg-error0_1.32-3 libgraphite2-3_1.3.12-1 libgraphite2-dev_1.3.12-1 libgssapi-krb5-2_1.16.1-1 libharfbuzz-dev_2.1.1-1 libharfbuzz-gobject0_2.1.1-1 libharfbuzz-icu0_2.1.1-1 libharfbuzz0b_2.1.1-1 libhogweed4_3.4-1 libice6_2:1.0.9-2 libicu-dev_63.1-4 libicu-le-hb-dev_1.0.3+git180724-3 libicu-le-hb0_1.0.3+git180724-3 libicu63_63.1-4 libiculx63_63.1-4 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libip4tc0_1.8.1-2 libisl19_0.20-2 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjson-c3_0.12.1-1.3 libk5crypto3_1.16.1-1 libkeyutils1_1.5.9-9.3 libklibc_2.0.4-14+rpi1 libkmod2_25-1 libkrb5-3_1.16.1-1 libkrb5support0_1.16.1-1 libksba8_1.3.5-2 liblapack-dev_3.8.0-1+b1 liblapack3_3.8.0-1+b1 libldap-2.4-2_2.4.46+dfsg-5+rpi1+b1 libldap-common_2.4.46+dfsg-5+rpi1 liblz4-1_1.8.2-1+rpi1 liblzma-dev_5.2.2-1.3 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmount1_2.32.1-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.1-1 libncurses-dev_6.1+20181013-1 libncurses5_6.1+20181013-1 libncurses5-dev_6.1+20181013-1 libncurses6_6.1+20181013-1 libncursesw5_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4-1 libnghttp2-14_1.34.0-1 libnlopt0_2.4.2+dfsg-8+b1 libnpth0_1.6-1 libnss-systemd_239-11+rpi1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.8 libpam-modules-bin_1.1.8-3.8 libpam-runtime_1.1.8-3.8 libpam-systemd_239-11+rpi1 libpam0g_1.1.8-3.8 libpango-1.0-0_1.42.4-4 libpangocairo-1.0-0_1.42.4-4 libpangoft2-1.0-0_1.42.4-4 libpaper-utils_1.1.24+nmu5 libpaper1_1.1.24+nmu5 libpcre16-3_2:8.39-11+rpi1 libpcre3_2:8.39-11+rpi1 libpcre3-dev_2:8.39-11+rpi1 libpcre32-3_2:8.39-11+rpi1 libpcrecpp0v5_2:8.39-11+rpi1 libperl5.24_5.24.1-7 libperl5.26_5.26.2-7+b1 libperl5.28_5.28.0-3 libpipeline1_1.5.0-2 libpixman-1-0_0.34.0-2 libplymouth4_0.9.4-1 libpng-dev_1.6.34-2+rpi1 libpng16-16_1.6.34-2+rpi1 libprocps7_2:3.3.15-2 libpsl5_0.20.2-2 libpython3-stdlib_3.6.7-1 libpython3.6-minimal_3.6.7-1 libpython3.6-stdlib_3.6.7-1 libreadline-dev_7.0-5 libreadline7_7.0-5 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27~rc8-1 libsasl2-modules-db_2.1.27~rc8-1 libseccomp2_2.3.3-3 libselinux1_2.8-1 libsemanage-common_2.8-1 libsemanage1_2.8-1 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm6_2:1.2.2-1+b3 libsmartcols1_2.32.1-0.1 libsqlite3-0_3.25.3-1 libss2_1.44.4-2 libssh2-1_1.8.0-2 libssl1.1_1.1.1-2 libstdc++-8-dev_8.2.0-9+rpi1 libstdc++6_8.2.0-9+rpi1 libswitch-perl_2.17-2 libsystemd0_239-11+rpi1 libtasn1-6_4.13-3 libtcl8.6_8.6.8+dfsg-4 libthai-data_0.1.28-1 libthai0_0.1.28-1 libtiff5_4.0.9+git181026-1 libtinfo5_6.1+20181013-1 libtinfo6_6.1+20181013-1 libtk8.6_8.6.8-4 libtool_2.4.6-6 libubsan1_8.2.0-9+rpi1 libudev1_239-11+rpi1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.32.1-0.1 libwebp6_0.6.1-2 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxau6_1:1.0.8-1+b2 libxcb-render0_1.13.1-1 libxcb-shm0_1.13.1-1 libxcb1_1.13.1-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.4+dfsg1-7+b1 libxmuu1_2:1.1.2-2 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.1.5-1 libzstd1_1.3.5+dfsg-1+rpi1 linux-base_4.5 linux-libc-dev_4.18.10-2+rpi1+b1 littler_0.3.5-1 login_1:4.5-1.1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.4-3 mawk_1.3.3-17 mime-support_3.61 mount_2.32.1-0.1 multiarch-support_2.27-8+rpi1 nano_3.1-1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 netbase_5.4 openssl_1.1.1-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.0-3 perl-base_5.28.0-3 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.2-7 perl-modules-5.28_5.28.0-3 pinentry-curses_1.1.0-1 pkg-config_0.29-4 plymouth_0.9.4-1 po-debconf_1.0.20 procps_2:3.3.15-2 python3_3.6.7-1 python3-distutils_3.7.1-1 python3-lib2to3_3.7.1-1 python3-minimal_3.6.7-1 python3.6_3.6.7-1 python3.6-minimal_3.6.7-1 r-base-core_3.5.1-1+b1 r-base-dev_3.5.1-1 r-cran-lattice_0.20-38-1 r-cran-littler_0.3.5-1+b1 r-cran-mass_7.3-51.1-1 r-cran-matrix_1.2-15-1 r-cran-minqa_1.2.4-1+b1 r-cran-nlme_3.1.137-1+b1 r-cran-nloptr_1.2.1-1 r-cran-pkgkitten_0.1.4-2 r-cran-rcpp_1.0.0-1+b1 r-cran-rcppeigen_0.3.3.4.0-1+b1 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-lme4-dummy_0.invalid.0 sed_4.5-2 sensible-utils_0.0.12 systemd_239-11+rpi1 systemd-sysv_239-11+rpi1 sysvinit-utils_2.88dsf-59.11 tar_1.30+dfsg-2 tzdata_2018g-1 ucf_3.0038 udev_239-11+rpi1 unzip_6.0-21 util-linux_2.32.1-0.1 x11-common_1:7.7+19 xauth_1:1.0.10-1 xdg-utils_1.1.3-1 xz-utils_5.2.2-1.3 zip_3.0-11 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Wed Nov 14 22:18:52 2018 UTC
gpgv: using RSA key A1489FE2AB99A21A
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./lme4_1.1-19-1.dsc
dpkg-source: info: extracting lme4 in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking lme4_1.1-19.orig.tar.gz
dpkg-source: info: unpacking lme4_1.1-19-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-ea1b39a6-332d-42dc-9e6b-d7b12dbbf9c0
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package lme4
dpkg-buildpackage: info: source version 1.1-19-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules build-arch
dh build-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
fakeroot debian/rules binary-arch
dh binary-arch --buildsystem R
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_installdirs -a -O--buildsystem=R
dh_auto_install -a -O--buildsystem=R
I: R Package: lme4 Version: 1.1-19
I: Building using R version 3.5.1-1
I: R API version: r-api-3.5
I: Using built-time from d/changelog: Mon, 12 Nov 2018 07:09:57 -0600
mkdir -p /<<PKGBUILDDIR>>/debian/r-cran-lme4/usr/lib/R/site-library
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-lme4/usr/lib/R/site-library --clean . "--built-timestamp='Mon, 12 Nov 2018 07:09:57 -0600'"
* installing *source* package 'lme4' ...
** package 'lme4' successfully unpacked and MD5 sums checked
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
g++ -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/Rcpp/include" -I"/usr/lib/R/site-library/RcppEigen/include" -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fdebug-prefix-map=/build/r-base-j0btTn/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c external.cpp -o external.o
g++ -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/Rcpp/include" -I"/usr/lib/R/site-library/RcppEigen/include" -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fdebug-prefix-map=/build/r-base-j0btTn/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c glmFamily.cpp -o glmFamily.o
g++ -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/Rcpp/include" -I"/usr/lib/R/site-library/RcppEigen/include" -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fdebug-prefix-map=/build/r-base-j0btTn/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c optimizer.cpp -o optimizer.o
g++ -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/Rcpp/include" -I"/usr/lib/R/site-library/RcppEigen/include" -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fdebug-prefix-map=/build/r-base-j0btTn/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c predModule.cpp -o predModule.o
g++ -I"/usr/share/R/include" -DNDEBUG -I"/usr/lib/R/site-library/Rcpp/include" -I"/usr/lib/R/site-library/RcppEigen/include" -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O2 -fdebug-prefix-map=/build/r-base-j0btTn/r-base-3.5.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c respModule.cpp -o respModule.o
g++ -shared -L/usr/lib/R/lib -Wl,-z,relro -o lme4.so external.o glmFamily.o optimizer.o predModule.o respModule.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-cran-lme4/usr/lib/R/site-library/lme4/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
code for methods in class "merPredD" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "lmResp" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "lmerResp" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "glmResp" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "nlsResp" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "glmFamily" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "golden" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "NelderMead" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "rePos" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
code for methods in class "vcRep" was not checked for suspicious field assignments (recommended package 'codetools' not available?)
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (lme4)
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 292.
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 293.
Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 296.
W: Ignoring specified R dependency: R (>= 3.2.0)
I: Using r-cran-matrix for Depends:Matrix (>= 1.2-1)
I: Using r-cran-knitr for Suggests:knitr
I: Using r-cran-boot for Suggests:boot
W: Cannot find a debian package for Suggests:PKPDmodels
W: Cannot find a debian package for Suggests:MEMSS
I: Using r-cran-testthat for Suggests:testthat (>= 0.8.1)
I: Using r-cran-ggplot2 for Suggests:ggplot2
I: Using r-cran-mlmrev for Suggests:mlmRev
W: Cannot find a debian package for Suggests:optimx (>= 2013.8.6)
W: Cannot find a debian package for Suggests:gamm4
I: Using r-cran-pbkrtest for Suggests:pbkrtest
W: Cannot find a debian package for Suggests:HSAUR2
I: Using r-cran-numderiv for Suggests:numDeriv
I: Using r-cran-car for Suggests:car
W: Cannot find a debian package for Suggests:dfoptim
I: Using r-cran-mass for Imports:MASS
I: Using r-cran-lattice for Imports:lattice
I: Using r-cran-nlme for Imports:nlme (>= 3.1-123)
I: Using r-cran-minqa for Imports:minqa (>= 1.1.15)
I: Using r-cran-nloptr for Imports:nloptr (>= 1.0.4)
Create lintian-override for package-contains-documentation-outside-usr-share-doc
dh_install -a -O--buildsystem=R
dh_installdocs -a -O--buildsystem=R
dh_installchangelogs -a -O--buildsystem=R
dh_installexamples -a -O--buildsystem=R
dh_installman -a -O--buildsystem=R
dh_installcatalogs -a -O--buildsystem=R
dh_installcron -a -O--buildsystem=R
dh_installdebconf -a -O--buildsystem=R
dh_installemacsen -a -O--buildsystem=R
dh_installifupdown -a -O--buildsystem=R
dh_installinfo -a -O--buildsystem=R
dh_installinit -a -O--buildsystem=R
dh_installmenu -a -O--buildsystem=R
dh_installmime -a -O--buildsystem=R
dh_installmodules -a -O--buildsystem=R
dh_installlogcheck -a -O--buildsystem=R
dh_installlogrotate -a -O--buildsystem=R
dh_installpam -a -O--buildsystem=R
dh_installppp -a -O--buildsystem=R
dh_installudev -a -O--buildsystem=R
dh_installgsettings -a -O--buildsystem=R
dh_bugfiles -a -O--buildsystem=R
dh_ucf -a -O--buildsystem=R
dh_lintian -a -O--buildsystem=R
dh_gconf -a -O--buildsystem=R
dh_gconf: Please migrate to dh_installgsettings; gconf + dh_gconf is scheduled for removal.
dh_icons -a -O--buildsystem=R
dh_perl -a -O--buildsystem=R
dh_usrlocal -a -O--buildsystem=R
dh_link -a -O--buildsystem=R
dh_installwm -a -O--buildsystem=R
dh_installxfonts -a -O--buildsystem=R
dh_strip_nondeterminism -a -O--buildsystem=R
dh_compress -a -O--buildsystem=R
dh_fixperms -a -O--buildsystem=R
dh_missing -a -O--buildsystem=R
dh_strip -a -O--buildsystem=R
dh_makeshlibs -a -O--buildsystem=R
dh_shlibdeps -a -O--buildsystem=R
dh_installdeb -a -O--buildsystem=R
dh_gencontrol -a -O--buildsystem=R
dpkg-gencontrol: warning: package r-cran-lme4: substitution variable ${R:Suggests} unused, but is defined
dpkg-gencontrol: warning: package r-cran-lme4: substitution variable ${R:Suggests} unused, but is defined
dh_md5sums -a -O--buildsystem=R
dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-cran-lme4' in '../r-cran-lme4_1.1-19-1_armhf.deb'.
dpkg-deb: building package 'r-cran-lme4-dbgsym' in '../r-cran-lme4-dbgsym_1.1-19-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../lme4_1.1-19-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-11-20T05:42:34Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
lme4_1.1-19-1_armhf.changes:
----------------------------
Format: 1.8
Date: Mon, 12 Nov 2018 07:09:57 -0600
Source: lme4
Binary: r-cran-lme4
Architecture: armhf
Version: 1.1-19-1
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Dirk Eddelbuettel <edd@debian.org>
Description:
r-cran-lme4 - GNU R package for linear mixed effects model fitting
Changes:
lme4 (1.1-19-1) unstable; urgency=medium
.
* New upstream release
.
* debian/control: Set Standards-Version: to current version
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6a44293cda1d28152a4fdece6949f0ea 4905796 gnu-r optional r-cran-lme4_1.1-19-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
r-cran-lme4-dbgsym_1.1-19-1_armhf.deb
-------------------------------------
new Debian package, version 2.0.
size 4329576 bytes: control archive=520 bytes.
344 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: r-cran-lme4-dbgsym
Source: lme4
Version: 1.1-19-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Installed-Size: 4337
Depends: r-cran-lme4 (= 1.1-19-1)
Section: debug
Priority: optional
Description: debug symbols for r-cran-lme4
Build-Ids: 47a9d18358d8946f1668be4a91c1e100d2e062be
drwxr-xr-x root/root 0 2018-11-12 13:09 ./
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/lib/
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/lib/debug/.build-id/47/
-rw-r--r-- root/root 4430556 2018-11-12 13:09 ./usr/lib/debug/.build-id/47/a9d18358d8946f1668be4a91c1e100d2e062be.debug
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/share/
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-11-12 13:09 ./usr/share/doc/r-cran-lme4-dbgsym -> r-cran-lme4
r-cran-lme4_1.1-19-1_armhf.deb
------------------------------
new Debian package, version 2.0.
size 4905796 bytes: control archive=3216 bytes.
791 bytes, 15 lines control
7491 bytes, 91 lines md5sums
Package: r-cran-lme4
Source: lme4
Version: 1.1-19-1
Architecture: armhf
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Installed-Size: 6767
Depends: libc6 (>= 2.23), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2), r-base-core (>= 3.5.1-1), r-api-3.5, r-cran-matrix (>= 1.2-1), r-cran-mass, r-cran-lattice, r-cran-nlme (>= 3.1-123), r-cran-minqa (>= 1.2.2-2), r-cran-nloptr (>= 1.0.4), r-cran-rcppeigen (>= 0.3.2.0.2-2)
Section: gnu-r
Priority: optional
Homepage: https://cran.r-project.org/package=lme4
Description: GNU R package for linear mixed effects model fitting
This CRAN package provides S4 classes and methods for fitting and
examining linear mixed effects models (also called multilevel models,
panel data models, and several other names) and generalized linear
mixed effects models.
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drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/lib/R/site-library/lme4/vignettedata/
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-rwxr-xr-x root/root 293564 2018-11-12 13:09 ./usr/lib/R/site-library/lme4/vignettedata/mcmcsampdat.RData
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/share/
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/share/doc/r-cran-lme4/
-rw-r--r-- root/root 3388 2018-11-12 13:09 ./usr/share/doc/r-cran-lme4/changelog.Debian.gz
-rw-r--r-- root/root 5677 2018-07-15 13:49 ./usr/share/doc/r-cran-lme4/changelog.gz
-rw-r--r-- root/root 1412 2018-04-03 22:20 ./usr/share/doc/r-cran-lme4/copyright
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/share/lintian/
drwxr-xr-x root/root 0 2018-11-12 13:09 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 3361 2018-04-03 22:21 ./usr/share/lintian/overrides/r-cran-lme4
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 27728
Build-Time: 209
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 396
Job: lme4_1.1-19-1
Machine Architecture: armhf
Package: lme4
Package-Time: 621
Source-Version: 1.1-19-1
Space: 27728
Status: successful
Version: 1.1-19-1
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Finished at 2018-11-20T05:42:34Z
Build needed 00:10:21, 27728k disk space