libmaus2 →
2.0.722+dfsg-1 →
armhf → 2020-08-15 09:11:15
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| libmaus2 2.0.722+dfsg-1 (armhf) Sat, 15 Aug 2020 08:39:48 +0000 |
+==============================================================================+
Package: libmaus2
Version: 2.0.722+dfsg-1
Source Version: 2.0.722+dfsg-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-49551119-8dbd-4582-8313-4fe163946149' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.8 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'libmaus2' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/libmaus2.git
Please use:
git clone https://salsa.debian.org/med-team/libmaus2.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 1626 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main libmaus2 2.0.722+dfsg-1 (dsc) [2133 B]
Get:2 http://172.17.0.1/private bullseye-staging/main libmaus2 2.0.722+dfsg-1 (tar) [1619 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main libmaus2 2.0.722+dfsg-1 (diff) [5092 B]
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Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/libmaus2-tiXveN/libmaus2-2.0.722+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libmaus2-tiXveN' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-aj3nMy/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-aj3nMy/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-aj3nMy/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-aj3nMy/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-aj3nMy/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-aj3nMy/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-aj3nMy/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-aj3nMy/apt_archive ./ Packages [431 B]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
bsdextrautils libpam-cap netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-aj3nMy/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, zlib1g-dev
Filtered Build-Depends: debhelper-compat (= 13), d-shlibs, pkg-config, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-libmaus2-dummy' in '/<<BUILDDIR>>/resolver-aj3nMy/apt_archive/sbuild-build-depends-libmaus2-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-libmaus2-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-aj3nMy/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-aj3nMy/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-aj3nMy/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-aj3nMy/apt_archive ./ Sources [515 B]
Get:5 copy:/<<BUILDDIR>>/resolver-aj3nMy/apt_archive ./ Packages [593 B]
Fetched 2441 B in 1s (3978 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install libmaus2 build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev d-shlibs debhelper dh-autoreconf
dh-strip-nondeterminism dwz file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0
libxml2 m4 man-db pkg-config po-debconf zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev d-shlibs debhelper dh-autoreconf
dh-strip-nondeterminism dwz file gettext gettext-base groff-base
intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0
libxml2 m4 man-db pkg-config po-debconf sbuild-build-depends-libmaus2-dummy
zlib1g-dev
0 upgraded, 35 newly installed, 0 to remove and 0 not upgraded.
Need to get 18.7 MB of archives.
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Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-3 [801 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf d-shlibs all 0.93 [17.7 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.2 [187 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.180-1 [162 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.4-1 [1159 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-3 [8287 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-5+b1 [593 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2 [1007 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
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Setting up automake (1:1.16.2-3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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Processing triggers for libc-bin (2.31-3+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-76-generic armhf (armv8l)
Toolchain package versions: binutils_2.35-1+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.1.0-6+rpi1 gcc-10_10.1.0-6+rpi1 libc6-dev_2.31-3+rpi1 libstdc++-10-dev_10.1.0-6+rpi1 libstdc++6_10.1.0-6+rpi1 linux-libc-dev_5.7.10-1+rpi1
Package versions: adduser_3.118 apt_2.1.10 aptitude_0.8.13-1+b1 aptitude-common_0.8.13-1 autoconf_2.69-11.1 automake_1:1.16.2-3 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-7 binutils_2.35-1+rpi1 binutils-arm-linux-gnueabihf_2.35-1+rpi1 binutils-common_2.35-1+rpi1 bsdextrautils_2.36-2 bsdutils_1:2.36-2 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.30-3 cpp_4:10.1.0-1+rpi1 cpp-10_10.1.0-6+rpi1 d-shlibs_0.93 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.36-2 file_1:5.38-5 findutils_4.7.0-1 g++_4:10.1.0-1+rpi1 g++-10_10.1.0-6+rpi1 gcc_4:10.1.0-1+rpi1 gcc-10_10.1.0-6+rpi1 gcc-10-base_10.1.0-6+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 libacl1_2.2.53-8 libapt-pkg6.0_2.1.10 libarchive-zip-perl_1.68-1 libasan6_10.1.0-6+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.1.0-6+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.35-1+rpi1 libblkid1_2.36-2 libboost-iostreams1.71.0_1.71.0-6+b1 libbz2-1.0_1.0.8-4 libc-bin_2.31-3+rpi1 libc-dev-bin_2.31-3+rpi1 libc6_2.31-3+rpi1 libc6-dev_2.31-3+rpi1 libcap-ng0_0.7.9-2.2 libcap2_1:2.42-2 libcap2-bin_1:2.42-2 libcc1-0_10.1.0-6+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.35-1+rpi1 libctf0_2.35-1+rpi1 libcwidget4_0.5.18-5 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.253 libdebhelper-perl_13.2 libdpkg-perl_1.20.5+rpi1 libelf1_0.180-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.36-2 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.1.0-6+rpi1 libgcc-s1_10.1.0-6+rpi1 libgcrypt20_1.8.6-2 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.4-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.14-2+b1 libgomp1_10.1.0-6+rpi1 libgpg-error0_1.38-2 libhogweed6_3.6-2 libicu67_67.1-3 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libksba8_1.4.0-2 libldap-2.4-2_2.4.50+dfsg-1+b1 libldap-common_2.4.50+dfsg-1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-2 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncursesw6_6.2-1 libnettle8_3.6-2 libnpth0_1.6-2 libp11-kit0_0.23.20-1 libpam-cap_1:2.42-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.2-2 libreadline8_8.0-4 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigc++-2.0-0v5_2.10.2-1 libsigsegv2_2.12-2 libsmartcols1_2.36-2 libsqlite3-0_3.32.3-1 libss2_1.45.6-1 libstdc++-10-dev_10.1.0-6+rpi1 libstdc++6_10.1.0-6+rpi1 libsub-override-perl_0.09-2 libsystemd0_245.6-2+rpi1+b1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libubsan1_10.1.0-6+rpi1 libuchardet0_0.0.7-1 libudev1_245.6-2+rpi1+b1 libunistring2_0.9.10-4 libuuid1_2.36-2 libxapian30_1.4.15-1 libxml2_2.9.10+dfsg-5+b1 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.7.10-1+rpi1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-2 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libmaus2-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 util-linux_2.36-2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.8XwkSPnZ/trustedkeys.kbx': General error
gpgv: Signature made Sat Jun 13 19:03:08 2020 UTC
gpgv: using RSA key 84C1977A89E7EFED3E5CA62E2FD8BEDAC020EED1
gpgv: issuer "moeller@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./libmaus2_2.0.722+dfsg-1.dsc
dpkg-source: info: extracting libmaus2 in /<<BUILDDIR>>/libmaus2-2.0.722+dfsg
dpkg-source: info: unpacking libmaus2_2.0.722+dfsg.orig.tar.xz
dpkg-source: info: unpacking libmaus2_2.0.722+dfsg-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-49551119-8dbd-4582-8313-4fe163946149
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package libmaus2
dpkg-buildpackage: info: source version 2.0.722+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:6: installing './compile'
configure.ac:4: installing './config.guess'
configure.ac:4: installing './config.sub'
configure.ac:8: installing './install-sh'
configure.ac:8: installing './missing'
Makefile.am: installing './INSTALL'
src/Makefile.am: installing './depcomp'
parallel-tests: installing './test-driver'
dh_auto_configure -a
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking
configure: Configuring for source in directory .
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking target system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking for gawk... no
checking for mawk... mawk
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
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checking for unistd.h... yes
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checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking whether make sets $(MAKE)... yes
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking how to create a pax tar archive... gnutar
checking dependency style of gcc... none
checking whether we are cross compiling... no
checking for bash... /bin/bash
checking for base64... /usr/bin/base64
checking for gcc... (cached) gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ISO C89... (cached) none needed
checking whether gcc understands -c and -o together... (cached) yes
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking dependency style of g++... none
checking whether host cpu is x86_64... no
checking whether host os is GNU/Linux... no
checking whether we are compiling for x86_64 CPU on GNU/Linux OS ... no
checking size of unsigned long... 4
checking winsock2.h usability... no
checking winsock2.h presence... no
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checking ws2tcpip.h usability... no
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checking poll.h usability... yes
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checking netdb.h usability... yes
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checking arpa/inet.h usability... yes
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checking sys/socket.h usability... yes
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checking sys/ioctl.h usability... yes
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checking netinet/in.h usability... yes
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checking netinet/tcp.h usability... yes
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checking execinfo.h usability... yes
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checking windows.h usability... no
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checking for unistd.h... (cached) yes
checking linux/sysctl.h usability... yes
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checking features.h usability... yes
checking features.h presence... yes
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checking for stdint.h... (cached) yes
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checking sys/prctl.h usability... yes
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checking libunwind.h usability... no
checking libunwind.h presence... no
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checking for unw_backtrace in -lunwind... no
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for zlib >= 0... yes
checking for zlib >= 0... yes
checking whether we can compile a zlib program... yes
checking snappy.h usability... no
checking snappy.h presence... no
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checking libdeflate.h usability... no
checking libdeflate.h presence... no
checking for libdeflate.h... no
checking for dlopen... no
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checking for dlopen in -ldl... yes
checking for dlerror in -ldl... yes
checking for dlsym in -ldl... yes
checking for dlclose in -ldl... yes
checking whether we found the dlopen function anywhere... yes
checking whether we found the dlerror function anywhere... yes
checking whether we found the dlsym function anywhere... yes
checking whether we found the dlclose function anywhere... yes
checking whether we found all the functions required for dynamic modules somewhere... yes
checking whether we need the dl library for any of the dl functions... yes
checking for backtrace... yes
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checking for symlink... yes
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checking for gethostbyname... yes
checking for gethostbyname2... yes
checking for prctl... yes
checking whether SIGPIPE exists... yes
checking whether SIGHUP exists... yes
checking whether pid_t exists... yes
checking whether getpid exists... yes
checking whether O_RDONLY... yes
checking whether O_WRONLY... yes
checking whether O_RDWR... yes
checking whether O_CREAT... yes
checking whether O_TRUNC... yes
checking whether OFF_T... yes
checking whether lseek function exists... yes
checking whether read function exists... yes
checking whether fstat function exists... yes
checking whether stat function exists... yes
checking whether fstatfs function exists... yes
checking whether sysconf function exists... yes
checking whether dirname function exists... yes
checking whether basename function exists... yes
checking whether write function exists... yes
checking whether mkdir takes one argument... no
checking whether mkdir takes two arguments... yes
checking whether WIFEXITED exists... yes
checking whether WEXITSTATUS exists... yes
checking whether the C++ compiler supports the -std=gnu++0x flag... yes
checking whether the C++ compiler supports the -msse4 flag... no
checking whether the C++ compiler supports the -msse2 flag... no
checking whether the C++ compiler supports the -mssse3 flag... no
checking whether the C++ compiler supports the -msse4.1 flag... no
checking whether the C++ compiler supports the -mavx flag... no
checking whether the C++ compiler supports the -mavx2 flag... no
checking smmintrin.h usability... no
checking smmintrin.h presence... no
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checking immintrin.h usability... no
checking immintrin.h presence... no
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checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (X128/8 variant)... no
checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (X128/16 variant)... no
checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (Y256/8 variant)... no
checking whether the C++ compiler supports all intrinsics required for SIMD global alignment (Y256/16 variant)... no
checking whether the C++ compiler supports all intrinsics required for one to many global alignment using AVX2... no
checking cstdint usability... yes
checking cstdint presence... yes
checking for cstdint... yes
checking whether the C++ compiler supports the -msse4 flag... no
checking for mmap... yes
checking for mmap flag MAP_HUGETLB... yes
checking for open with 2 arguments... yes
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checking for close... yes
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checking whether the C++ compiler supports the -W flag... yes
checking whether the C++ compiler supports the -Wall flag... yes
checking whether the C++ compiler supports the -Wnon-virtual-dtor flag... yes
checking for OpenMP flag of C++ compiler... -fopenmp
checking whether std::unique_ptr exists... yes
checking whether std::shared_ptr exists... yes
checking whether std::unordered_map exists... yes
checking whether std::unordered_set exists... yes
checking whether std::move exists... yes
checking whether byte ordering is bigendian... no
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking libgen.h usability... yes
checking libgen.h presence... yes
checking for libgen.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for sys/types.h... (cached) yes
checking sys/vfs.h usability... yes
checking sys/vfs.h presence... yes
checking for sys/vfs.h... yes
checking whether we can compile a program using statfs... yes
checking whether struct statfs has field f_iosize... no
checking whether struct statfs has field f_bsize... yes
checking whether the C++ compiler supports the -pthread flag... yes
checking whether the C++ compiler supports __sync_fetch_and_add... yes
checking whether the C++ compiler supports __sync_add_and_fetch... yes
checking whether the C++ compiler supports __sync_fetch_and_and... yes
checking whether the C++ compiler supports __sync_fetch_and_or... yes
checking whether the C++ compiler supports __sync_fetch_and_sub... yes
checking whether the C++ compiler supports __sync_bool_compare_and_swap... yes
checking whether the C++ compiler supports __sync_lock_test_and_set... yes
checking whether the C++ compiler supports __sync_lock_release... yes
checking whether the C++ compiler supports __sync_val_compare_and_swap... yes
checking whether posix_memalign is present... yes
checking whether getpagesize is present... yes
checking for unsigned __int128... no
checking whether we can compile a program using the gmp library... no
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... 64
checking for _LARGEFILE_SOURCE value needed for large files... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating libmaus2.pc
config.status: creating libmaus2irods.pc
config.status: creating ubuntu.sh
config.status: creating src/libmaus2/LibMausConfig.hpp
config.status: creating test/Makefile
config.status: creating config.h
config.status: executing libtool commands
config.status: executing depfiles commands
dh_auto_build -a
make -j4
make[1]: Entering directory '/<<BUILDDIR>>/libmaus2-2.0.722+dfsg'
make all-recursive
make[2]: Entering directory '/<<BUILDDIR>>/libmaus2-2.0.722+dfsg'
Making all in src
make[3]: Entering directory '/<<BUILDDIR>>/libmaus2-2.0.722+dfsg/src'
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-I386CacheLineSize.lo `test -f 'libmaus2/util/I386CacheLineSize.cpp' || echo './'`libmaus2/util/I386CacheLineSize.cpp
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/I386CacheLineSize.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-I386CacheLineSize.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/OutputFileNameTools.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-OutputFileNameTools.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/Phred.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-Phred.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadEndsContainer.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ReadEndsContainer.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/Phred.cpp -o libmaus2/fastx/la-Phred.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadEnds.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ReadEnds.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/I386CacheLineSize.cpp -o libmaus2/util/la-I386CacheLineSize.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/OutputFileNameTools.cpp -o libmaus2/util/la-OutputFileNameTools.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignmentDecoderBase.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/StrCmpNum.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-StrCmpNum.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/StrCmpNum.cpp -o libmaus2/bambam/la-StrCmpNum.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/huffman/KvInitResult.cpp -fPIC -DPIC -o libmaus2/huffman/.libs/la-KvInitResult.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/huffman/KvInitResult.cpp -o libmaus2/huffman/la-KvInitResult.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/TempFileNameGenerator.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-TempFileNameGenerator.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/TempFileNameGenerator.cpp -o libmaus2/util/la-TempFileNameGenerator.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/TempFileNameGeneratorState.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-TempFileNameGeneratorState.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadEnds.cpp -o libmaus2/bambam/la-ReadEnds.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderBase.cpp -o libmaus2/bambam/la-BamAlignmentDecoderBase.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadEndsContainer.cpp -o libmaus2/bambam/la-ReadEndsContainer.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/TempFileNameGeneratorState.cpp -o libmaus2/util/la-TempFileNameGeneratorState.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ArgInfo.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ArgInfo.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/BitList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-BitList.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/BitList.cpp -o libmaus2/util/la-BitList.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/VarBitList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-VarBitList.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Concat.lo `test -f 'libmaus2/util/Concat.cpp' || echo './'`libmaus2/util/Concat.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/VarBitList.cpp -o libmaus2/util/la-VarBitList.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Concat.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Concat.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-ConcatRequest.lo `test -f 'libmaus2/util/ConcatRequest.cpp' || echo './'`libmaus2/util/ConcatRequest.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ConcatRequest.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ConcatRequest.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ArgInfo.cpp -o libmaus2/util/la-ArgInfo.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-ConsoleColor.lo `test -f 'libmaus2/util/ConsoleColor.cpp' || echo './'`libmaus2/util/ConsoleColor.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ConsoleColor.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ConsoleColor.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ConcatRequest.cpp -o libmaus2/util/la-ConcatRequest.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ConsoleColor.cpp -o libmaus2/util/la-ConsoleColor.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Concat.cpp -o libmaus2/util/la-Concat.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Demangle.lo `test -f 'libmaus2/util/Demangle.cpp' || echo './'`libmaus2/util/Demangle.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Demangle.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Demangle.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Demangle.cpp -o libmaus2/util/la-Demangle.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-DynamicLoading.lo `test -f 'libmaus2/util/DynamicLoading.cpp' || echo './'`libmaus2/util/DynamicLoading.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-GetFileSize.lo `test -f 'libmaus2/util/GetFileSize.cpp' || echo './'`libmaus2/util/GetFileSize.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/DynamicLoading.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-DynamicLoading.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/GetFileSize.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-GetFileSize.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Histogram.lo `test -f 'libmaus2/util/Histogram.cpp' || echo './'`libmaus2/util/Histogram.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Histogram.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Histogram.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/DynamicLoading.cpp -o libmaus2/util/la-DynamicLoading.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-HistogramSet.lo `test -f 'libmaus2/util/HistogramSet.cpp' || echo './'`libmaus2/util/HistogramSet.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/HistogramSet.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-HistogramSet.o
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<long long unsigned int> libmaus2::util::Histogram::getKeyVector()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/HistogramSet.cpp -o libmaus2/util/la-HistogramSet.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::util::Histogram::getFreqSymVector()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/Histogram.hpp:23,
from libmaus2/util/Histogram.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-IncreasingList.lo `test -f 'libmaus2/util/IncreasingList.cpp' || echo './'`libmaus2/util/IncreasingList.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/IncreasingList.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-IncreasingList.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Histogram.cpp -o libmaus2/util/la-Histogram.o >/dev/null 2>&1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/IncreasingList.hpp:23,
from libmaus2/util/IncreasingList.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/IncreasingList.hpp:23,
from libmaus2/util/IncreasingList.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/GetFileSize.cpp -o libmaus2/util/la-GetFileSize.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-IntervalTree.lo `test -f 'libmaus2/util/IntervalTree.cpp' || echo './'`libmaus2/util/IntervalTree.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/IntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-IntervalTree.o
/usr/include/c++/10/bits/stl_algo.h: In static member function ‘static void libmaus2::util::IncreasingList::test(const std::vector<long long unsigned int>&)’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/IncreasingList.cpp -o libmaus2/util/la-IncreasingList.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-GenericIntervalTree.lo `test -f 'libmaus2/util/GenericIntervalTree.cpp' || echo './'`libmaus2/util/GenericIntervalTree.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/GenericIntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-GenericIntervalTree.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/IntervalTree.cpp -o libmaus2/util/la-IntervalTree.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-LookupIntervalTree.lo `test -f 'libmaus2/util/LookupIntervalTree.cpp' || echo './'`libmaus2/util/LookupIntervalTree.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LookupIntervalTree.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-LookupIntervalTree.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-md5_interface.lo `test -f 'libmaus2/digest/md5_interface.cpp' || echo './'`libmaus2/digest/md5_interface.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/GenericIntervalTree.cpp -o libmaus2/util/la-GenericIntervalTree.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/md5_interface.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-md5_interface.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-MemLimit.lo `test -f 'libmaus2/util/MemLimit.cpp' || echo './'`libmaus2/util/MemLimit.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/MemLimit.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-MemLimit.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LookupIntervalTree.cpp -o libmaus2/util/la-LookupIntervalTree.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/MemLimit.cpp -o libmaus2/util/la-MemLimit.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/md5_interface.cpp -o libmaus2/digest/la-md5_interface.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-MemUsage.lo `test -f 'libmaus2/util/MemUsage.cpp' || echo './'`libmaus2/util/MemUsage.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/MemUsage.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-MemUsage.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-nstat.lo `test -f 'libmaus2/util/nstat.cpp' || echo './'`libmaus2/util/nstat.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/nstat.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-nstat.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/nstat.cpp -o libmaus2/util/la-nstat.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PosixExecute.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-PosixExecute.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/SaturatingCounter.cpp -o libmaus2/util/la-SaturatingCounter.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PosixExecute.cpp -o libmaus2/util/la-PosixExecute.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/StringSerialisation.cpp -o libmaus2/util/la-StringSerialisation.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/SuccinctBorderArray.cpp -o libmaus2/util/la-SuccinctBorderArray.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Terminal.lo `test -f 'libmaus2/util/Terminal.cpp' || echo './'`libmaus2/util/Terminal.cpp
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Terminal.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Terminal.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/OctetString.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-OctetString.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Utf8String.lo `test -f 'libmaus2/util/Utf8String.cpp' || echo './'`libmaus2/util/Utf8String.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Terminal.cpp -o libmaus2/util/la-Terminal.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8String.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8String.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8BlockIndexDecoder.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8BlockIndexDecoder.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8BlockIndex.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8BlockIndex.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8BlockIndexDecoder.cpp -o libmaus2/util/la-Utf8BlockIndexDecoder.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/util/Utf8BlockIndex.hpp:22,
from libmaus2/util/Utf8BlockIndex.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/util/Utf8BlockIndex.hpp:22,
from libmaus2/util/Utf8BlockIndex.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static libmaus2::util::Utf8BlockIndex::unique_ptr_type libmaus2::util::Utf8BlockIndex::constructFromUtf8File(const string&, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Utf8DecoderBuffer.lo `test -f 'libmaus2/util/Utf8DecoderBuffer.cpp' || echo './'`libmaus2/util/Utf8DecoderBuffer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8DecoderBuffer.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Utf8DecoderBuffer.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8BlockIndex.cpp -o libmaus2/util/la-Utf8BlockIndex.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/OctetString.cpp -o libmaus2/util/la-OctetString.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8DecoderBuffer.cpp -o libmaus2/util/la-Utf8DecoderBuffer.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/AlignmentValidity.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-AlignmentValidity.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8String.cpp -o libmaus2/util/la-Utf8String.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Utf8DecoderWrapper.cpp -o libmaus2/util/la-Utf8DecoderWrapper.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/AlignmentValidity.cpp -o libmaus2/bambam/la-AlignmentValidity.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamFlagBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamFlagBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadGroup.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ReadGroup.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamFlagBase.cpp -o libmaus2/bambam/la-BamFlagBase.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/DuplicationMetrics.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-DuplicationMetrics.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ReadGroup.cpp -o libmaus2/bambam/la-ReadGroup.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamDefaultAdapters.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamDefaultAdapters.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/DuplicationMetrics.cpp -o libmaus2/bambam/la-DuplicationMetrics.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamDefaultAdapters.cpp -o libmaus2/bambam/la-BamDefaultAdapters.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamRange.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamRange.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamIndexBinChunk.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamIndexBinChunk.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamIndexBinChunk.cpp -o libmaus2/bambam/la-BamIndexBinChunk.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamIndexLinearChunk.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamIndexLinearChunk.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/huffman/HuffmanTree.cpp -fPIC -DPIC -o libmaus2/huffman/.libs/la-HuffmanTree.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamIndexLinearChunk.cpp -o libmaus2/bambam/la-BamIndexLinearChunk.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderInfo.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignmentDecoderInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/huffman/HuffmanTree.cpp -o libmaus2/huffman/la-HuffmanTree.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignmentDecoderInfo.cpp -o libmaus2/bambam/la-BamAlignmentDecoderInfo.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/Lz4Base.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-Lz4Base.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/Lz4DecoderBuffer.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-Lz4DecoderBuffer.o
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libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/lz/lz4.c -fPIC -DPIC -o libmaus2/lz/.libs/la-lz4.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/Lz4DecoderBuffer.cpp -o libmaus2/lz/la-Lz4DecoderBuffer.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/Lz4Compress.cpp -o libmaus2/lz/la-Lz4Compress.o >/dev/null 2>&1
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -pthread -fopenmp -c libmaus2/lz/lz4.c -o libmaus2/lz/la-lz4.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamRange.cpp -o libmaus2/bambam/la-BamRange.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexInterval.cpp -fPIC -DPIC -o libmaus2/fm/.libs/la-BidirectionalIndexInterval.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexInterval.cpp -o libmaus2/fm/la-BidirectionalIndexInterval.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp -fPIC -DPIC -o libmaus2/fm/.libs/la-BidirectionalIndexIntervalSymbol.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastALineParserLineInfo.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastALineParserLineInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAMatchTable.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAMatchTable.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fm/BidirectionalIndexIntervalSymbol.cpp -o libmaus2/fm/la-BidirectionalIndexIntervalSymbol.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastALineParserLineInfo.cpp -o libmaus2/fastx/la-FastALineParserLineInfo.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAMatchTable.cpp -o libmaus2/fastx/la-FastAMatchTable.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndexEntry.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastABgzfIndexEntry.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndex.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastABgzfIndex.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAIndexEntry.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAIndexEntry.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndexEntry.cpp -o libmaus2/fastx/la-FastABgzfIndexEntry.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAIndexEntry.cpp -o libmaus2/fastx/la-FastAIndexEntry.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastABgzfIndex.cpp -o libmaus2/fastx/la-FastABgzfIndex.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/LocalBaseConstants.cpp -o libmaus2/lcs/la-LocalBaseConstants.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamHeaderParserStateBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamHeaderParserStateBase.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/LocalEditDistanceResult.cpp -o libmaus2/lcs/la-LocalEditDistanceResult.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/GeneFlatFile.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-GeneFlatFile.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-GeneFlatFileEntry.lo `test -f 'libmaus2/bambam/GeneFlatFileEntry.cpp' || echo './'`libmaus2/bambam/GeneFlatFileEntry.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAIndex.cpp -o libmaus2/fastx/la-FastAIndex.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/GeneFlatFileEntry.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-GeneFlatFileEntry.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/GeneFlatFileEntry.cpp -o libmaus2/bambam/la-GeneFlatFileEntry.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/network/la-GnuTLSInit.lo `test -f 'libmaus2/network/GnuTLSInit.cpp' || echo './'`libmaus2/network/GnuTLSInit.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/network/GnuTLSInit.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-GnuTLSInit.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/network/GnuTLSInit.cpp -o libmaus2/network/la-GnuTLSInit.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/network/la-GnuTLSSocket.lo `test -f 'libmaus2/network/GnuTLSSocket.cpp' || echo './'`libmaus2/network/GnuTLSSocket.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/network/GnuTLSSocket.cpp -fPIC -DPIC -o libmaus2/network/.libs/la-GnuTLSSocket.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamStreamingMarkDuplicatesSupport.lo `test -f 'libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp' || echo './'`libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/GeneFlatFile.cpp -o libmaus2/bambam/la-GeneFlatFile.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamStreamingMarkDuplicatesSupport.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamHeaderParserStateBase.cpp -o libmaus2/bambam/la-BamHeaderParserStateBase.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/network/GnuTLSSocket.cpp -o libmaus2/network/la-GnuTLSSocket.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-SamInfoBase.lo `test -f 'libmaus2/bambam/SamInfoBase.cpp' || echo './'`libmaus2/bambam/SamInfoBase.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/SamInfoBase.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-SamInfoBase.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-SHA1.lo `test -f 'libmaus2/digest/SHA1.cpp' || echo './'`libmaus2/digest/SHA1.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA1.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA1.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/SamInfoBase.cpp -o libmaus2/bambam/la-SamInfoBase.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/digest/la-SHA2_224.lo `test -f 'libmaus2/digest/SHA2_224.cpp' || echo './'`libmaus2/digest/SHA2_224.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA1.cpp -o libmaus2/digest/la-SHA1.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_224.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_224.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_256.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_256.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_384.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA2_384.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_224.cpp -o libmaus2/digest/la-SHA2_224.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_256.cpp -o libmaus2/digest/la-SHA2_256.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_384.cpp -o libmaus2/digest/la-SHA2_384.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamStreamingMarkDuplicatesSupport.cpp -o libmaus2/bambam/la-BamStreamingMarkDuplicatesSupport.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA2_512.cpp -o libmaus2/digest/la-SHA2_512.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32C_Core.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32C_Core.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32C_Core.cpp -o libmaus2/digest/la-CRC32C_Core.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32C.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32C.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32.cpp -o libmaus2/digest/la-CRC32.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32_Core.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-CRC32_Core.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32_Core.cpp -o libmaus2/digest/la-CRC32_Core.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/CRC32C.cpp -o libmaus2/digest/la-CRC32C.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/NameInfoBase.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-NameInfoBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/NameInfoBase.cpp -o libmaus2/fastx/la-NameInfoBase.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/parallel/RefIdInterval.cpp -fPIC -DPIC -o libmaus2/bambam/parallel/.libs/la-RefIdInterval.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/RefPathToken.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-RefPathToken.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/parallel/RefIdInterval.cpp -o libmaus2/bambam/parallel/la-RefIdInterval.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/RefPathTokenVector.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-RefPathTokenVector.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/RefPathToken.cpp -o libmaus2/fastx/la-RefPathToken.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/RefPathTokenVector.cpp -o libmaus2/fastx/la-RefPathTokenVector.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignmentStatistics.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-AlignmentStatistics.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/SingleWordDNABitBuffer.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-SingleWordDNABitBuffer.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignmentStatistics.cpp -o libmaus2/lcs/la-AlignmentStatistics.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/SingleWordDNABitBuffer.cpp -o libmaus2/fastx/la-SingleWordDNABitBuffer.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/LongestIncreasingSubsequenceExtendedResult.cpp -o libmaus2/util/la-LongestIncreasingSubsequenceExtendedResult.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-AlignerFactory.lo `test -f 'libmaus2/lcs/AlignerFactory.cpp' || echo './'`libmaus2/lcs/AlignerFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignerFactory.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-AlignerFactory.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-BandedAlignerFactory.lo `test -f 'libmaus2/lcs/BandedAlignerFactory.cpp' || echo './'`libmaus2/lcs/BandedAlignerFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/BandedAlignerFactory.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-BandedAlignerFactory.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-TraceBlock.lo `test -f 'libmaus2/dazzler/align/TraceBlock.cpp' || echo './'`libmaus2/dazzler/align/TraceBlock.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TraceBlock.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TraceBlock.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-ApproximateRun.lo `test -f 'libmaus2/dazzler/align/ApproximateRun.cpp' || echo './'`libmaus2/dazzler/align/ApproximateRun.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/ApproximateRun.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-ApproximateRun.o
In file included from libmaus2/lcs/AlignerFactory.cpp:27:
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = true; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:118:43: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
912 | if ( AlignmentTraceContainer::capacity() <= std::min(an,bn)+ed )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = false; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:120:44: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TraceBlock.cpp -o libmaus2/dazzler/align/la-TraceBlock.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/ApproximateRun.cpp -o libmaus2/dazzler/align/la-ApproximateRun.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/la-BwtMergeBlockSortRequest.lo `test -f 'libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp' || echo './'`libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapMeta.lo `test -f 'libmaus2/dazzler/align/OverlapMeta.cpp' || echo './'`libmaus2/dazzler/align/OverlapMeta.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp -fPIC -DPIC -o libmaus2/suffixsort/.libs/la-BwtMergeBlockSortRequest.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapMeta.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapMeta.o
In file included from /usr/include/c++/10/cassert:44,
from ./libmaus2/dazzler/align/Path.hpp:29,
from ./libmaus2/dazzler/align/Overlap.hpp:21,
from ./libmaus2/dazzler/align/OverlapMeta.hpp:21,
from libmaus2/dazzler/align/OverlapMeta.cpp:18:
./libmaus2/dazzler/align/Path.hpp: In member function ‘void libmaus2::dazzler::align::Path::alignToTracePoints(int64_t)’:
./libmaus2/dazzler/align/Path.hpp:319:20: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
319 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:344:22: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
344 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:358:22: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
358 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:366:20: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
366 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/BandedAlignerFactory.cpp -o libmaus2/lcs/la-BandedAlignerFactory.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignerFactory.cpp -o libmaus2/lcs/la-AlignerFactory.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapMeta.cpp -o libmaus2/dazzler/align/la-OverlapMeta.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-Tandem.lo `test -f 'libmaus2/dazzler/align/Tandem.cpp' || echo './'`libmaus2/dazzler/align/Tandem.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/Tandem.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-Tandem.o
In file included from /usr/include/c++/10/cassert:44,
from ./libmaus2/dazzler/align/Path.hpp:29,
from ./libmaus2/dazzler/align/Overlap.hpp:21,
from ./libmaus2/dazzler/align/OverlapMeta.hpp:21,
from ./libmaus2/dazzler/align/Tandem.hpp:21,
from libmaus2/dazzler/align/Tandem.cpp:19:
./libmaus2/dazzler/align/Path.hpp: In member function ‘void libmaus2::dazzler::align::Path::alignToTracePoints(int64_t)’:
./libmaus2/dazzler/align/Path.hpp:319:20: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
319 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:344:22: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
344 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:358:22: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
358 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:366:20: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
366 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-TandemVector.lo `test -f 'libmaus2/dazzler/align/TandemVector.cpp' || echo './'`libmaus2/dazzler/align/TandemVector.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TandemVector.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TandemVector.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/BwtMergeBlockSortRequest.cpp -o libmaus2/suffixsort/la-BwtMergeBlockSortRequest.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/math/la-GmpInteger.lo `test -f 'libmaus2/math/GmpInteger.cpp' || echo './'`libmaus2/math/GmpInteger.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/math/GmpInteger.cpp -fPIC -DPIC -o libmaus2/math/.libs/la-GmpInteger.o
In file included from /usr/include/c++/10/cassert:44,
from ./libmaus2/dazzler/align/Path.hpp:29,
from ./libmaus2/dazzler/align/Overlap.hpp:21,
from ./libmaus2/dazzler/align/OverlapMeta.hpp:21,
from ./libmaus2/dazzler/align/Tandem.hpp:21,
from ./libmaus2/dazzler/align/TandemVector.hpp:21,
from libmaus2/dazzler/align/TandemVector.cpp:18:
./libmaus2/dazzler/align/Path.hpp: In member function ‘void libmaus2::dazzler::align::Path::alignToTracePoints(int64_t)’:
./libmaus2/dazzler/align/Path.hpp:319:20: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
319 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:344:22: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
344 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:358:22: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
358 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:366:20: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
366 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/Tandem.cpp -o libmaus2/dazzler/align/la-Tandem.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/math/GmpInteger.cpp -o libmaus2/math/la-GmpInteger.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TandemVector.cpp -o libmaus2/dazzler/align/la-TandemVector.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/math/la-GmpFloat.lo `test -f 'libmaus2/math/GmpFloat.cpp' || echo './'`libmaus2/math/GmpFloat.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/math/GmpFloat.cpp -fPIC -DPIC -o libmaus2/math/.libs/la-GmpFloat.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TracePoint.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-TracePoint.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/math/GmpFloat.cpp -o libmaus2/math/la-GmpFloat.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/TracePoint.cpp -o libmaus2/dazzler/align/la-TracePoint.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/XzDecoder.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-XzDecoder.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ArgParser.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-ArgParser.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataSequence.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataSequence.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/XzDecoder.cpp -o libmaus2/lz/la-XzDecoder.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataSequence.cpp -o libmaus2/fastx/la-DNAIndexMetaDataSequence.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/ArgParser.cpp -o libmaus2/util/la-ArgParser.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaData.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaData.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/PileVectorElement.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-PileVectorElement.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/PileQualityVectorElement.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-PileQualityVectorElement.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/PileVectorElement.cpp -o libmaus2/bambam/la-PileVectorElement.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/PileQualityVectorElement.cpp -o libmaus2/bambam/la-PileQualityVectorElement.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaData.cpp -o libmaus2/fastx/la-DNAIndexMetaData.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA3_256.cpp -fPIC -DPIC -o libmaus2/digest/.libs/la-SHA3_256.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBand.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBand.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-DNAIndexMetaDataBigBandBiDir.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/digest/SHA3_256.cpp -o libmaus2/digest/la-SHA3_256.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/DNARankBiDirRange.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-DNARankBiDirRange.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/DNARankBiDirRange.cpp -o libmaus2/rank/la-DNARankBiDirRange.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBand.cpp -o libmaus2/fastx/la-DNAIndexMetaDataBigBand.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/DNAIndexMetaDataBigBandBiDir.cpp -o libmaus2/fastx/la-DNAIndexMetaDataBigBandBiDir.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-NNPTraceElement.lo `test -f 'libmaus2/lcs/NNPTraceElement.cpp' || echo './'`libmaus2/lcs/NNPTraceElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPTraceElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPTraceElement.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPTraceElement.cpp -o libmaus2/lcs/la-NNPTraceElement.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-NNPTraceContainer.lo `test -f 'libmaus2/lcs/NNPTraceContainer.cpp' || echo './'`libmaus2/lcs/NNPTraceContainer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPTraceContainer.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPTraceContainer.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-NNPAlignResult.lo `test -f 'libmaus2/lcs/NNPAlignResult.cpp' || echo './'`libmaus2/lcs/NNPAlignResult.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/fastx/la-FastAToCompact4BigBand.lo `test -f 'libmaus2/fastx/FastAToCompact4BigBand.cpp' || echo './'`libmaus2/fastx/FastAToCompact4BigBand.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPAlignResult.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-NNPAlignResult.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAToCompact4BigBand.cpp -fPIC -DPIC -o libmaus2/fastx/.libs/la-FastAToCompact4BigBand.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtMergeSortResult.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPAlignResult.cpp -o libmaus2/lcs/la-NNPAlignResult.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-HugePages.lo `test -f 'libmaus2/util/HugePages.cpp' || echo './'`libmaus2/util/HugePages.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/HugePages.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-HugePages.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/NNPTraceContainer.cpp -o libmaus2/lcs/la-NNPTraceContainer.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lz/la-ZlibInterface.lo `test -f 'libmaus2/lz/ZlibInterface.cpp' || echo './'`libmaus2/lz/ZlibInterface.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/ZlibInterface.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-ZlibInterface.o
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/fastx/FastAToCompact4BigBand.hpp:21,
from libmaus2/fastx/FastAToCompact4BigBand.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static int libmaus2::fastx::FastAToCompact4BigBand::fastaToCompact4BigBand(const std::vector<std::__cxx11::basic_string<char> >&, bool, bool, std::ostream*, std::string)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libmaus2/fastx/FastAToCompact4BigBand.cpp:403:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
403 | }
| ^
libmaus2/fastx/FastAToCompact4BigBand.cpp:403:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/HugePages.cpp -o libmaus2/util/la-HugePages.o >/dev/null 2>&1
In file included from /usr/include/c++/10/cassert:44,
from ./libmaus2/suffixsort/divsufsort.hpp:32,
from ./libmaus2/util/Utf8String.hpp:27,
from ./libmaus2/wavelet/Utf8ToImpCompactHuffmanWaveletTree.hpp:26,
from ./libmaus2/wavelet/RlToHwtBase.hpp:30,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:19:
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned char; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1401:105: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:136:53: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:811:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
811 | assert ( symtonodesp-symtonodes.begin() == symtonodevecoffsets[sym] );
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = short unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1410:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:136:53: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:811:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1419:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:136:53: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:811:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = long long unsigned int; bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1428:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = true; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:136:53: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:811:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned char; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1401:105: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:143:54: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:811:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = short unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1410:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:143:54: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:811:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1419:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:143:54: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:811:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
./libmaus2/wavelet/RlToHwtBase.hpp: In instantiation of ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwtSmallAlphabet(const string&, const libmaus2::huffman::HuffmanTree&, uint64_t) [with entity_type = long long unsigned int; bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’:
./libmaus2/wavelet/RlToHwtBase.hpp:1428:106: required from ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder; libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type = std::unique_ptr<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>, std::default_delete<libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank> > >; std::string = std::__cxx11::basic_string<char>; uint64_t = long long unsigned int]’
libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:143:54: required from here
./libmaus2/wavelet/RlToHwtBase.hpp:811:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/fastx/FastAToCompact4BigBand.cpp -o libmaus2/fastx/la-FastAToCompact4BigBand.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/ZlibInterface.cpp -o libmaus2/lz/la-ZlibInterface.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.lo `test -f 'libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-BwtSelectSSA.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/aio/la-FileRemoval.lo `test -f 'libmaus2/aio/FileRemoval.cpp' || echo './'`libmaus2/aio/FileRemoval.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/FileRemoval.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-FileRemoval.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/FileRemoval.cpp -o libmaus2/aio/la-FileRemoval.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/rank/la-DNARankMEM.lo `test -f 'libmaus2/rank/DNARankMEM.cpp' || echo './'`libmaus2/rank/DNARankMEM.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/DNARankMEM.cpp -fPIC -DPIC -o libmaus2/rank/.libs/la-DNARankMEM.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-ChainAddQueueElement.lo `test -f 'libmaus2/lcs/ChainAddQueueElement.cpp' || echo './'`libmaus2/lcs/ChainAddQueueElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainAddQueueElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainAddQueueElement.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/rank/DNARankMEM.cpp -o libmaus2/rank/la-DNARankMEM.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainAddQueueElement.cpp -o libmaus2/lcs/la-ChainAddQueueElement.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-Chain.lo `test -f 'libmaus2/lcs/Chain.cpp' || echo './'`libmaus2/lcs/Chain.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/Chain.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-Chain.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-ChainNode.lo `test -f 'libmaus2/lcs/ChainNode.cpp' || echo './'`libmaus2/lcs/ChainNode.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainNode.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainNode.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainNode.cpp -o libmaus2/lcs/la-ChainNode.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-ChainNodeInfo.lo `test -f 'libmaus2/lcs/ChainNodeInfo.cpp' || echo './'`libmaus2/lcs/ChainNodeInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/Chain.cpp -o libmaus2/lcs/la-Chain.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainNodeInfo.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainNodeInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainNodeInfo.cpp -o libmaus2/lcs/la-ChainNodeInfo.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-ChainRemoveQueueElement.lo `test -f 'libmaus2/lcs/ChainRemoveQueueElement.cpp' || echo './'`libmaus2/lcs/ChainRemoveQueueElement.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainRemoveQueueElement.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainRemoveQueueElement.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/la-ChainSplayTreeNode.lo `test -f 'libmaus2/lcs/ChainSplayTreeNode.cpp' || echo './'`libmaus2/lcs/ChainSplayTreeNode.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainSplayTreeNode.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/la-ChainSplayTreeNode.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainRemoveQueueElement.cpp -o libmaus2/lcs/la-ChainRemoveQueueElement.o >/dev/null 2>&1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long int, long long unsigned int>}; _Tp = std::pair<long long int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolDepthVector(std::vector<std::pair<long long int, long long unsigned int> >&, uint64_t) const’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long int, long long unsigned int>*, std::vector<std::pair<long long int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/ChainSplayTreeNode.cpp -o libmaus2/lcs/la-ChainSplayTreeNode.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/aio/la-PosixFdOutputStreamFactory.lo `test -f 'libmaus2/aio/PosixFdOutputStreamFactory.cpp' || echo './'`libmaus2/aio/PosixFdOutputStreamFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/PosixFdOutputStreamFactory.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-PosixFdOutputStreamFactory.o
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >; _Distance = int; _Tp = QueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<std::less<QueueElement> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapHeader.lo `test -f 'libmaus2/dazzler/align/OverlapHeader.cpp' || echo './'`libmaus2/dazzler/align/OverlapHeader.cpp
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, IsaTriple>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::MergingReadBack<IsaTriple, std::less<IsaTriple> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapHeader.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapHeader.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapHeader.cpp -o libmaus2/dazzler/align/la-OverlapHeader.o >/dev/null 2>&1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::huffman::HuffmanTreeInnerNode* const&>, std::tuple<>}; _Key = const libmaus2::huffman::HuffmanTreeInnerNode*; _Val = std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >; _Compare = std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>; _Alloc = std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeInnerNode::toDot(std::ostream&) const’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/bambam/la-BamAlignment.lo `test -f 'libmaus2/bambam/BamAlignment.cpp' || echo './'`libmaus2/bambam/BamAlignment.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignment.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-BamAlignment.o
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::util::MemTempFileContainer::closeOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::MemTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::FileTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::huffman::IndexEntry&}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int>}; _Tp = std::pair<std::__cxx11::basic_string<char>, long long unsigned int>; _Alloc = std::allocator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {QueueElement}; _Tp = QueueElement; _Alloc = std::allocator<QueueElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<QueueElement, std::allocator<QueueElement> >::iterator’ changed in GCC 7.1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/PosixFdOutputStreamFactory.cpp -o libmaus2/aio/la-PosixFdOutputStreamFactory.o >/dev/null 2>&1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, IsaTriple>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::MergingReadBack<IsaTriple, std::less<IsaTriple> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, IsaTriple>}; _Tp = std::pair<long long unsigned int, IsaTriple>; _Alloc = std::allocator<std::pair<long long unsigned int, IsaTriple> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>&}; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Alloc = std::allocator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::MergingReadBack<_data_type, _order_type>::MergingReadBack(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = IsaTriple; _order_type = std::less<IsaTriple>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.lo `test -f 'libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp' || echo './'`libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp -fPIC -DPIC -o libmaus2/suffixsort/bwtb3m/.libs/la-MergeStrategyMergeInput.o
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::wavelet::ImpHuffmanWaveletTree::init()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::huffman::RLEncoderTemplate<_huffmanencoderfile_type>::concatenate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool) [with _huffmanencoderfile_type = libmaus2::huffman::HuffmanEncoderFileTemplate<libmaus2::aio::SynchronousGenericOutput<unsigned char>, libmaus2::bitio::FastWriteBitWriterTemplate<unsigned char, libmaus2::aio::PutOutputIterator<unsigned char, libmaus2::aio::SynchronousGenericOutput<unsigned char> >, 128, 255, false> >]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
./libmaus2/autoarray/AutoArray.hpp: In static member function ‘static std::vector<long long unsigned int> libmaus2::sorting::MergingReadBack<_data_type, _order_type>::mergeStep(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = IsaTriple; _order_type = std::less<IsaTriple>]’:
./libmaus2/autoarray/AutoArray.hpp:1909:5: warning: ‘<anonymous>’ may be used uninitialized in this function [-Wmaybe-uninitialized]
1909 | array[i] = N();
| ^~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus210suffixsort6bwtb3m12BwtSelectSSA10computeSSAESt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS9_EERKS9_SD_SD_RKSB_S9_byyyyPSo._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, IsaTriple>*, std::vector<std::pair<long long unsigned int, IsaTriple>, std::allocator<std::pair<long long unsigned int, IsaTriple> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus27wavelet49ImpExternalWaveletGeneratorCompactHuffmanParallel17createFinalStreamISoEEyRT_y._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/BamAlignment.cpp -o libmaus2/bambam/la-BamAlignment.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::wavelet::Utf8ToImpCompactHuffmanWaveletTree::constructWaveletTreeFromRl(const string&, const string&, const string&, const libmaus2::huffman::HuffmanTree&, uint64_t, uint64_t) [with rl_decoder = libmaus2::huffman::RLDecoder; bool radixsort = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::util::ImpCompactNumberArray::unique_ptr_type libmaus2::util::ImpCompactNumberArrayGenerator::createFinal()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = false; bool keepsecond = false]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtSelectSSA.hpp:21,
from libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::sorting::PairFileSorting::sortPairFileTemplate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool, bool, bool, out_type&, uint64_t, uint64_t, bool, uint64_t, std::ostream*) [with out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::suffixsort::bwtb3m::BwtSelectSSA::computeSSA(std::vector<std::__cxx11::basic_string<char> >, const string&, const string&, const string&, const std::vector<std::__cxx11::basic_string<char> >&, std::string, bool, uint64_t, uint64_t, uint64_t, uint64_t, std::ostream*)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<QueueElement*, std::vector<QueueElement, std::allocator<QueueElement> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/util/NumberSerialisation.hpp:28,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyMergeGapRequestQueryObject.hpp:24,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyBlock.hpp:22,
from ./libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.hpp:21,
from libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::suffixsort::BwtMergeZBlock}; _Tp = libmaus2::suffixsort::BwtMergeZBlock; _Alloc = std::allocator<libmaus2::suffixsort::BwtMergeZBlock>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::suffixsort::BwtMergeZBlock>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<libmaus2::rank::ImpCacheLineRank>::unique_ptr_type libmaus2::wavelet::RlToHwtBase<_utf8_input_type, _rl_decoder>::rlToHwt(const string&, const string&, std::string, uint64_t) [with bool _utf8_input_type = false; _rl_decoder = libmaus2::huffman::RLDecoder]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::suffixsort::bwtb3m::MergeStrategyMergeBlock::fillGapRequestObjects(uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::suffixsort::BwtMergeZBlock*, std::vector<libmaus2::suffixsort::BwtMergeZBlock> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from ./libmaus2/rank/ImpCacheLineRank.hpp:24,
from ./libmaus2/wavelet/ImpCompactHuffmanWaveletTree.hpp:23,
from ./libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.hpp:24,
from libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp:18:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::wavelet::ImpExternalWaveletGeneratorHuffman::ImpExternalWaveletGeneratorHuffman(const libmaus2::huffman::HuffmanTreeNode*, libmaus2::util::TempFileContainer&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-Command.lo `test -f 'libmaus2/util/Command.cpp' || echo './'`libmaus2/util/Command.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Command.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-Command.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/MergeStrategyMergeInput.cpp -o libmaus2/suffixsort/bwtb3m/la-MergeStrategyMergeInput.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtSelectSSA.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtSelectSSA.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/Command.cpp -o libmaus2/util/la-Command.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-CommandContainer.lo `test -f 'libmaus2/util/CommandContainer.cpp' || echo './'`libmaus2/util/CommandContainer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/CommandContainer.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-CommandContainer.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/suffixsort/bwtb3m/BwtMergeSortResult.cpp -o libmaus2/suffixsort/bwtb3m/la-BwtMergeSortResult.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/CommandContainer.cpp -o libmaus2/util/la-CommandContainer.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/aio/la-InputOutputStreamInstance.lo `test -f 'libmaus2/aio/InputOutputStreamInstance.cpp' || echo './'`libmaus2/aio/InputOutputStreamInstance.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/InputOutputStreamInstance.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-InputOutputStreamInstance.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/InputOutputStreamInstance.cpp -o libmaus2/aio/la-InputOutputStreamInstance.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapInfo.lo `test -f 'libmaus2/dazzler/align/OverlapInfo.cpp' || echo './'`libmaus2/dazzler/align/OverlapInfo.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapInfo.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapInfo.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapInfo.cpp -o libmaus2/dazzler/align/la-OverlapInfo.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/dazzler/align/la-OverlapDataInterface.lo `test -f 'libmaus2/dazzler/align/OverlapDataInterface.cpp' || echo './'`libmaus2/dazzler/align/OverlapDataInterface.cpp
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/util/la-PathTools.lo `test -f 'libmaus2/util/PathTools.cpp' || echo './'`libmaus2/util/PathTools.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapDataInterface.cpp -fPIC -DPIC -o libmaus2/dazzler/align/.libs/la-OverlapDataInterface.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PathTools.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-PathTools.o
In file included from /usr/include/c++/10/cassert:44,
from ./libmaus2/dazzler/align/Path.hpp:29,
from ./libmaus2/dazzler/align/Overlap.hpp:21,
from ./libmaus2/dazzler/align/OverlapData.hpp:23,
from ./libmaus2/dazzler/align/OverlapDataInterface.hpp:21,
from libmaus2/dazzler/align/OverlapDataInterface.cpp:18:
./libmaus2/dazzler/align/Path.hpp: In member function ‘void libmaus2::dazzler::align::Path::alignToTracePoints(int64_t)’:
./libmaus2/dazzler/align/Path.hpp:319:20: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
319 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:344:22: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
344 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:358:22: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
358 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
./libmaus2/dazzler/align/Path.hpp:366:20: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
366 | assert ( tlen = path.size() * 2 );
| ~~~~~^~~~~~~~~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/PathTools.cpp -o libmaus2/util/la-PathTools.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/dazzler/align/OverlapDataInterface.cpp -o libmaus2/dazzler/align/la-OverlapDataInterface.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/aio/la-OFStreamOutputStreamFactory.lo `test -f 'libmaus2/aio/OFStreamOutputStreamFactory.cpp' || echo './'`libmaus2/aio/OFStreamOutputStreamFactory.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/OFStreamOutputStreamFactory.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-OFStreamOutputStreamFactory.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/OFStreamOutputStreamFactory.cpp -o libmaus2/aio/la-OFStreamOutputStreamFactory.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/aio/la-PosixFdInput.lo `test -f 'libmaus2/aio/PosixFdInput.cpp' || echo './'`libmaus2/aio/PosixFdInput.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/PosixFdInput.cpp -fPIC -DPIC -o libmaus2/aio/.libs/la-PosixFdInput.o
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/parallel/la-StdSemaphore.lo `test -f 'libmaus2/parallel/StdSemaphore.cpp' || echo './'`libmaus2/parallel/StdSemaphore.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/parallel/StdSemaphore.cpp -fPIC -DPIC -o libmaus2/parallel/.libs/la-StdSemaphore.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/aio/PosixFdInput.cpp -o libmaus2/aio/la-PosixFdInput.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/parallel/StdSemaphore.cpp -o libmaus2/parallel/la-StdSemaphore.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/BgzfDeflateHeaderFunctions.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-BgzfDeflateHeaderFunctions.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/BgzfDeflateZStreamBase.cpp -fPIC -DPIC -o libmaus2/lz/.libs/la-BgzfDeflateZStreamBase.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/BgzfDeflateHeaderFunctions.cpp -o libmaus2/lz/la-BgzfDeflateHeaderFunctions.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lz/BgzfDeflateZStreamBase.cpp -o libmaus2/lz/la-BgzfDeflateZStreamBase.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ChecksumsFactory.cpp -fPIC -DPIC -o libmaus2/bambam/.libs/la-ChecksumsFactory.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/parallel/StdMutex.cpp -fPIC -DPIC -o libmaus2/parallel/.libs/la-StdMutex.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/parallel/StdMutex.cpp -o libmaus2/parallel/la-StdMutex.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/parallel/StdSpinLock.cpp -fPIC -DPIC -o libmaus2/parallel/.libs/la-StdSpinLock.o
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/StackTraceBufferContainer.cpp -fPIC -DPIC -o libmaus2/util/.libs/la-StackTraceBufferContainer.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/parallel/StdSpinLock.cpp -o libmaus2/parallel/la-StdSpinLock.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants128.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants128.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentConstants128.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_8.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_8.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentX128_16.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86BandedGlobalAlignmentX128_16.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_8.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_8.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentX128_16.cpp -o libmaus2/lcs/simd_align_128_la-SimdX86GlobalAlignmentX128_16.o >/dev/null 2>&1
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libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants256.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentConstants256.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentConstants256.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.lo `test -f 'libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp' || echo './'`libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_8.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_8.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.lo `test -f 'libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp' || echo './'`libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/util/StackTraceBufferContainer.cpp -o libmaus2/util/la-StackTraceBufferContainer.o >/dev/null 2>&1
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentY256_16.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentY256_16.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.lo `test -f 'libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp' || echo './'`libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86BandedGlobalAlignmentScoreY256_16.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86BandedGlobalAlignmentScoreY256_16.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_8.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_8.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.lo `test -f 'libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp' || echo './'`libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/SimdX86GlobalAlignmentY256_16.cpp -o libmaus2/lcs/simd_align_256_la-SimdX86GlobalAlignmentY256_16.o >/dev/null 2>&1
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o libmaus2/lcs/simd_align_256_la-AlignmentOneAgainstManyAVX2.lo `test -f 'libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp' || echo './'`libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp -fPIC -DPIC -o libmaus2/lcs/.libs/simd_align_256_la-AlignmentOneAgainstManyAVX2.o
In file included from ./libmaus2/digest/md5.hpp:25,
from ./libmaus2/fastx/FastAStreamSet.hpp:25,
from ./libmaus2/bambam/BamHeader.hpp:38,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/ChecksumsInterface.hpp:22,
from ./libmaus2/bambam/ChecksumsFactory.hpp:22,
from libmaus2/bambam/ChecksumsFactory.cpp:20:
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘libmaus2::math::UnsignedInteger<k>::UnsignedInteger(const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0]’:
./libmaus2/digest/DigestBase.hpp:130:47: required from ‘libmaus2::math::UnsignedInteger<0> libmaus2::digest::DigestBase<0, _blockshift, _needpad, _numlen, _prefersinglecall>::digestui() [with unsigned int _blockshift = 0; bool _needpad = false; unsigned int _numlen = 0; bool _prefersinglecall = false]’
libmaus2/bambam/ChecksumsFactory.cpp:1302:71: required from ‘void OrderIndependentSeqDataChecksums<_crc_container_type>::push(const uint8_t*, uint32_t, typename OrderIndependentSeqDataChecksums<_crc_container_type>::crc_container_type::context_type&, bool) [with _crc_container_type = NullChecksums; uint8_t = unsigned char; uint32_t = unsigned int; typename OrderIndependentSeqDataChecksums<_crc_container_type>::crc_container_type::context_type = libmaus2::bambam::SeqChksumUpdateContext<libmaus2::digest::Null>]’
libmaus2/bambam/ChecksumsFactory.cpp:1385:15: required from ‘void Checksums<_container_type, _header_type>::update(const uint8_t*, uint32_t, bool) [with _container_type = NullChecksums; _header_type = libmaus2::bambam::BamHeaderReadGroupInterface; uint8_t = unsigned char; uint32_t = unsigned int]’
libmaus2/bambam/ChecksumsFactory.cpp:1383:7: required from here
./libmaus2/math/UnsignedInteger.hpp:162:27: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
162 | for ( size_t i = 0; i < k; ++i )
| ~~^~~
libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp: In member function ‘virtual void libmaus2::lcs::AlignmentOneAgainstManyAVX2::process(const uint8_t*, const uint8_t*, const std::pair<const unsigned char*, long long unsigned int>*, uint64_t, libmaus2::autoarray::AutoArray<long long unsigned int>&)’:
libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp:344:18: warning: unused parameter ‘qa’ [-Wunused-parameter]
344 | uint8_t const * qa,
| ~~~~~~~~~~~~~~~~^~
libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp:345:18: warning: unused parameter ‘qe’ [-Wunused-parameter]
345 | uint8_t const * qe,
| ~~~~~~~~~~~~~~~~^~
libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp:346:46: warning: unused parameter ‘MA’ [-Wunused-parameter]
346 | std::pair<uint8_t const *,uint64_t> const * MA,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
In file included from ./libmaus2/lcs/AlignmentOneAgainstManyAVX2.hpp:24,
from libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp:19:
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = true; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:118:43: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
912 | if ( AlignmentTraceContainer::capacity() <= std::min(an,bn)+ed )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
./libmaus2/lcs/NP.hpp: In instantiation of ‘int64_t libmaus2::lcs::NP::npTemplate(iter_a, iter_a, iter_b, iter_b) [with iter_a = const unsigned char*; iter_b = const unsigned char*; bool self_check = false; int64_t = long long int]’:
./libmaus2/lcs/NP.hpp:120:44: required from ‘int64_t libmaus2::lcs::NP::np(iter_a, iter_a, iter_b, iter_b, bool) [with iter_a = const unsigned char*; iter_b = const unsigned char*; int64_t = long long int]’
./libmaus2/lcs/NP.hpp:106:23: required from here
./libmaus2/lcs/NP.hpp:912:46: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘long long int’ [-Wsign-compare]
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbitbtree-testbitbtree.o `test -f 'test/testbitbtree.cpp' || echo './'`test/testbitbtree.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/lcs/AlignmentOneAgainstManyAVX2.cpp -o libmaus2/lcs/simd_align_256_la-AlignmentOneAgainstManyAVX2.o >/dev/null 2>&1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from test/testbitbtree.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int main()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<1, 1>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testBitIO-testBitIO.o `test -f 'test/testBitIO.cpp' || echo './'`test/testBitIO.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbtree-testbtree.o `test -f 'test/testbtree.cpp' || echo './'`test/testbtree.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/GetFileSize.hpp:26,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorInput.hpp:22,
from test/testBitIO.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/GetFileSize.hpp:26,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorInput.hpp:22,
from test/testBitIO.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testBWTDyn-testBWTDyn.o `test -f 'test/testBWTDyn.cpp' || echo './'`test/testBWTDyn.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorInput.hpp:22,
from test/testBitIO.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorInput.hpp:22,
from test/testBitIO.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void bubbleSortCheck()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/GetFileSize.hpp:26,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/bitio/BitVectorInput.hpp:22,
from test/testBitIO.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
test/testBitIO.cpp:280:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
280 | }
| ^
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testBWTHufDyn-testBWTHufDyn.o `test -f 'test/testBWTHufDyn.cpp' || echo './'`test/testBWTHufDyn.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from ./libmaus2/wavelet/DynamicWaveletTree.hpp:25,
from test/testBWTDyn.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from ./libmaus2/wavelet/DynamicWaveletTree.hpp:25,
from test/testBWTDyn.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testDivSufSort-testDivSufSort.o `test -f 'test/testDivSufSort.cpp' || echo './'`test/testDivSufSort.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from ./libmaus2/wavelet/DynamicHuffmanWaveletTree.hpp:23,
from test/testBWTHufDyn.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long int&&>, std::tuple<>}; _Key = long long int; _Val = std::pair<const long long int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, long long unsigned int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from ./libmaus2/wavelet/DynamicHuffmanWaveletTree.hpp:23,
from test/testBWTHufDyn.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from ./libmaus2/wavelet/DynamicHuffmanWaveletTree.hpp:23,
from test/testBWTHufDyn.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::util::MemTempFileContainer::closeOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::MemTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitbtree/bitbtree.hpp:29,
from ./libmaus2/wavelet/DynamicHuffmanWaveletTree.hpp:23,
from test/testBWTHufDyn.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In function ‘void computeBWT(const string&, std::ostream&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from test/testDivSufSort.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::FileTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘void testTempFileContainer()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testDNABitWords-testDNABitWords.o `test -f 'test/testDNABitWords.cpp' || echo './'`test/testDNABitWords.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testFastRead-testFastRead.o `test -f 'test/testFastRead.cpp' || echo './'`test/testFastRead.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testHuffman-testHuffman.o `test -f 'test/testHuffman.cpp' || echo './'`test/testHuffman.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/ToUpperTable.hpp:23,
from ./libmaus2/fastx/Pattern.hpp:27,
from test/testFastRead.cpp:22:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::fastx::FastInterval}; _Tp = libmaus2::fastx::FastInterval; _Alloc = std::allocator<libmaus2::fastx::FastInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/ToUpperTable.hpp:23,
from ./libmaus2/fastx/Pattern.hpp:27,
from test/testFastRead.cpp:22:
/usr/include/c++/10/bits/stl_vector.h: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/ToUpperTable.hpp:23,
from ./libmaus2/fastx/Pattern.hpp:27,
from test/testFastRead.cpp:22:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testFastRead.cpp:127:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
127 | }
| ^
test/testFastRead.cpp:127:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_map.h: In function ‘static void libmaus2::lcp::SuccinctLCP<_lf_type, _sampled_sa_type, _sampled_isa_type>::writeSuccinctLCP(lf_type&, isa_type&, lcp_type&, std::ostream&, libmaus2::util::TempFileContainer&, uint64_t, std::ostream*) [with lf_type = libmaus2::lf::LF; isa_type = libmaus2::fm::SampledISA<libmaus2::lf::LF>; lcp_type = libmaus2::autoarray::AutoArray<long long int>; _lf_type = libmaus2::lf::LF; _sampled_sa_type = libmaus2::fm::SimpleSampledSA<libmaus2::lf::LF>; _sampled_isa_type = libmaus2::fm::SampledISA<libmaus2::lf::LF>]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testIsa-testIsa.o `test -f 'test/testIsa.cpp' || echo './'`test/testIsa.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testkmp-testkmp.o `test -f 'test/testkmp.cpp' || echo './'`test/testkmp.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const int, long long unsigned int> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<int, std::pair<const int, long long unsigned int>, std::_Select1st<std::pair<const int, long long unsigned int> >, std::less<int>, std::allocator<std::pair<const int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testlz-testlz.o `test -f 'test/testlz.cpp' || echo './'`test/testlz.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::wavelet::HuffmanWaveletTree::HuffmanWaveletTreeNavigationNode::offsetVector(std::vector<long long unsigned int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static bool libmaus2::util::SuccinctBorderArray::check(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_map.h: In static member function ‘static bool libmaus2::util::SuccinctBorderArray::checkFibonacci(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘void findSplitCommon(const string&, uint64_t, uint64_t, int64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
126 | }
| ^
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:126:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testLazyFailureFunctionRandom(const string&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testSimpleDynamic()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
94 | }
| ^
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
test/testkmp.cpp:94:1: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/util/BorderArray.hpp:22,
from test/testkmp.cpp:21:
/usr/include/c++/10/bits/stl_map.h: In static member function ‘static bool libmaus2::util::BorderArray<value_type>::checkFibonacci(uint64_t) [with value_type = unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::pair<std::vector<long long unsigned int>, std::vector<long long unsigned int> > libmaus2::huffman::EncodeTable<words>::symsOrderedByCode() const [with unsigned int words = 1]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/huffman/huffman.hpp:183,
from test/testHuffman.cpp:23:
./libmaus2/huffman/EncodeTable.hpp:148:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
148 | }
| ^
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testRank-testRank.o `test -f 'test/testRank.cpp' || echo './'`test/testRank.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘uint64_t libmaus2::wavelet::HuffmanWaveletTree::serialize(std::ostream&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testRangeQuantile()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from test/testHuffman.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In static member function ‘static void libmaus2::wavelet::HuffmanWaveletTree::testTree(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<int, std::pair<const int, long long unsigned int>, std::_Select1st<std::pair<const int, long long unsigned int> >, std::less<int>, std::allocator<std::pair<const int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<int, std::pair<const int, long long unsigned int>, std::_Select1st<std::pair<const int, long long unsigned int> >, std::less<int>, std::allocator<std::pair<const int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bitio::FastWriteBitWriterTemplate<_data_type, _data_iterator, basemask, fullmask, _write_safe>::writeInternal(N, unsigned int) [with N = long long unsigned int; _data_type = long long unsigned int; _data_iterator = std::back_insert_iterator<std::vector<long long unsigned int> >; _data_type basemask = 9223372036854775808; _data_type fullmask = 18446744073709551615; bool _write_safe = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from test/testlz.cpp:96:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from test/testlz.cpp:96:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, long long unsigned int>}; _Tp = std::pair<unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<unsigned int, long long unsigned int>, std::allocator<std::pair<unsigned int, long long unsigned int> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<unsigned int, long long unsigned int>, std::allocator<std::pair<unsigned int, long long unsigned int> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222B, unsigned int>::RangeCountStackElement&}; _Tp = libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222B, unsigned int>::RangeCountStackElement; _Alloc = std::allocator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222B, unsigned int>::RangeCountStackElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222B, unsigned int>::RangeCountStackElement, std::allocator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222B, unsigned int>::RangeCountStackElement> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘std::vector<std::pair<_symbol_type, long long unsigned int> > libmaus2::wavelet::WaveletTree<_rank_type, _symbol_type>::rangeCountMax(uint64_t, uint64_t, uint64_t) const [with _rank_type = libmaus2::rank::ERank222B; _symbol_type = unsigned int]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<unsigned int, long long unsigned int>*, std::vector<std::pair<unsigned int, long long unsigned int>, std::allocator<std::pair<unsigned int, long long unsigned int> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222B, unsigned int>::RangeCountStackElement*, std::vector<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222B, unsigned int>::RangeCountStackElement, std::allocator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222B, unsigned int>::RangeCountStackElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222B, unsigned int>::RangeCountStackElement*, std::vector<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222B, unsigned int>::RangeCountStackElement, std::allocator<libmaus2::wavelet::WaveletTree<libmaus2::rank::ERank222B, unsigned int>::RangeCountStackElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/GzipOutputStreamBuffer.hpp:24,
from ./libmaus2/lz/GzipOutputStream.hpp:22,
from test/testlz.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::util::ContainerGetObject<std::vector<unsigned char> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = char; _Val = std::pair<const char, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const char, long long unsigned int> >; _Compare = std::less<char>; _Alloc = std::allocator<std::pair<const char, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<char, std::pair<const char, long long unsigned int>, std::_Select1st<std::pair<const char, long long unsigned int> >, std::less<char>, std::allocator<std::pair<const char, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = unsigned int; _Val = std::pair<const unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, long long unsigned int> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<unsigned int, std::pair<const unsigned int, long long unsigned int>, std::_Select1st<std::pair<const unsigned int, long long unsigned int> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In function ‘void checkStreams64(unsigned int)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘bool checkE2Append(unsigned int)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/rank/ChooseCache.hpp:23,
from ./libmaus2/rank/CodeBase.hpp:23,
from ./libmaus2/rank/EncodeCache.hpp:23,
from ./libmaus2/rank/ERankBase.hpp:24,
from test/testRank.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testToWaveletTreeBits-testToWaveletTreeBits.o `test -f 'test/testToWaveletTreeBits.cpp' || echo './'`test/testToWaveletTreeBits.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testWaveletExternal-testWaveletExternal.o `test -f 'test/testWaveletExternal.cpp' || echo './'`test/testWaveletExternal.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++0x -pthread -fopenmp -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c libmaus2/bambam/ChecksumsFactory.cpp -o libmaus2/bambam/la-ChecksumsFactory.o >/dev/null 2>&1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testTrie-testTrie.o `test -f 'test/testTrie.cpp' || echo './'`test/testTrie.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:24,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:24,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:24,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::trie::TrieState<char>* const&>, std::tuple<>}; _Key = const libmaus2::trie::TrieState<char>*; _Val = std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> >; _Compare = std::less<const libmaus2::trie::TrieState<char>*>; _Alloc = std::allocator<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::trie::TrieState<char>*, std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> >, std::less<const libmaus2::trie::TrieState<char>*>, std::allocator<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/bitio/BitIOOutput.hpp:24,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:24,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:24,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::vector<libmaus2::trie::LinearTrieState<_char_type> > libmaus2::trie::Trie<_char_type>::toLinearStateVector() const [with _char_type = char]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::trie::TrieState<char>*, std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> >, std::less<const libmaus2::trie::TrieState<char>*>, std::allocator<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/bitio/BitIOOutput.hpp:24,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:24,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from test/testTrie.cpp:20:
./libmaus2/trie/TrieState.hpp:704:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
704 | }
| ^
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:24,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::trie::TrieState<char>*, std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> >, std::less<const libmaus2::trie::TrieState<char>*>, std::allocator<std::pair<const libmaus2::trie::TrieState<char>* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/bitio/BitIOOutput.hpp:24,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:24,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bitio/BitIOOutput.hpp:27,
from ./libmaus2/uint/uint.hpp:32,
from ./libmaus2/util/SimpleHashMapKeyPrint.hpp:24,
from ./libmaus2/util/SimpleHashMap.hpp:24,
from ./libmaus2/trie/TrieState.hpp:24,
from test/testTrie.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from test/testTrie.cpp:20:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbandedlcs-testbandedlcs.o `test -f 'test/testbandedlcs.cpp' || echo './'`test/testbandedlcs.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbamwriter-testbamwriter.o `test -f 'test/testbamwriter.cpp' || echo './'`test/testbamwriter.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testarraydecode-testarraydecode.o `test -f 'test/testarraydecode.cpp' || echo './'`test/testarraydecode.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/serialize/Serialize.hpp:28,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/serialize/Serialize.hpp:28,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/serialize/Serialize.hpp:28,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, long long unsigned int>}; _Tp = std::pair<std::__cxx11::basic_string<char>, long long unsigned int>; _Alloc = std::allocator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::huffman::HuffmanTreeInnerNode* const&>, std::tuple<>}; _Key = const libmaus2::huffman::HuffmanTreeInnerNode*; _Val = std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >; _Compare = std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>; _Alloc = std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeInnerNode::toDot(std::ostream&) const’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsnappy-testsnappy.o `test -f 'test/testsnappy.cpp' || echo './'`test/testsnappy.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long int; _Val = std::pair<const long long int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, long long unsigned int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long int&&>, std::tuple<>}; _Key = long long int; _Val = std::pair<const long long int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, long long unsigned int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<long long int, long long unsigned int> libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<_rank_type>::enumerateSymbolsInRange(uint64_t, uint64_t) const [with _rank_type = libmaus2::rank::ImpCacheLineRank]’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::MemTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/serialize/Serialize.hpp:28,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘uint64_t libmaus2::wavelet::ImpExternalWaveletGeneratorHuffmanParallel::createFinalStreamTemplate(ostream_type&, uint64_t) [with ostream_type = std::basic_ostream<char>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::wavelet::ImpExternalWaveletGeneratorHuffmanParallel::ImpExternalWaveletGeneratorHuffmanParallel(const libmaus2::huffman::HuffmanTreeNode*, libmaus2::util::TempFileNameGenerator&, uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from test/testsnappy.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from test/testsnappy.cpp:25:
./libmaus2/lz/SnappyInputStreamArray.hpp: In constructor ‘libmaus2::lz::SnappyInputStreamArray::SnappyInputStreamArray(std::istream&, iterator, iterator) [with iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >]’:
./libmaus2/lz/SnappyInputStreamArray.hpp:33:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
33 | SnappyInputStreamArray(std::istream & in, iterator offa, iterator offe)
| ^~~~~~~~~~~~~~~~~~~~~~
./libmaus2/lz/SnappyInputStreamArray.hpp:33:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
./libmaus2/lz/SnappyInputStreamArray.hpp:33:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/serialize/Serialize.hpp:28,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus27wavelet42ImpExternalWaveletGeneratorHuffmanParallel25createFinalStreamTemplateISoEEyRT_y._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘_ZN8libmaus27wavelet49ImpExternalWaveletGeneratorCompactHuffmanParallel17createFinalStreamINS_3aio20OutputStreamInstanceEEEyRT_y._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, long long unsigned int>*, std::vector<std::pair<std::__cxx11::basic_string<char>, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::wavelet::ImpHuffmanWaveletTree::init()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘void testHuffmanWaveletSer()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘void testHuffmanWavelet()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from test/testsnappy.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testSnappyStreamDual()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testsnappy.cpp:109:80: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
109 | ::libmaus2::lz::SnappyInputStreamArray SISA(istr,offsets.begin(),offsets.end());
| ^
In file included from ./libmaus2/wavelet/ImpExternalWaveletGeneratorCompactHuffman.hpp:33,
from test/testWaveletExternal.cpp:28:
./libmaus2/huffman/HuffmanTree.hpp: In constructor ‘libmaus2::huffman::HuffmanTree::HuffmanTree(iterator, uint64_t, bool, bool, bool) [with iterator = std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >]’:
./libmaus2/huffman/HuffmanTree.hpp:643:4: note: parameter passing for argument of type ‘std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >’ changed in GCC 7.1
643 | HuffmanTree(iterator F, uint64_t const s, bool const sortbydepth = false, bool const rsetcode = false, bool const rdfsorder = false)
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::wavelet::ImpExternalWaveletGeneratorCompactHuffman::ImpExternalWaveletGeneratorCompactHuffman(const libmaus2::huffman::HuffmanTree&, libmaus2::util::TempFileContainer&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsnappyconcat-testsnappyconcat.o `test -f 'test/testsnappyconcat.cpp' || echo './'`test/testsnappyconcat.cpp
/usr/include/c++/10/bits/stl_map.h: In function ‘void testCompactHuffman()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
test/testWaveletExternal.cpp:307:64: note: parameter passing for argument of type ‘std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >’ changed in GCC 7.1
307 | libmaus2::huffman::HuffmanTree H(F.begin(),F.size(),false,true);
| ^
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/serialize/Serialize.hpp:28,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘void testCompactHuffmanPar()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
test/testWaveletExternal.cpp:372:64: note: parameter passing for argument of type ‘std::_Rb_tree_iterator<std::pair<const long long int, long long unsigned int> >’ changed in GCC 7.1
372 | libmaus2::huffman::HuffmanTree H(F.begin(),F.size(),false,true);
| ^
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/serialize/Serialize.hpp:28,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/CompressorObject.hpp:23,
from ./libmaus2/lz/SnappyCompressorObject.hpp:22,
from ./libmaus2/lz/SnappyCompressorObjectFactory.hpp:22,
from test/testsnappyconcat.cpp:22:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char, std::char_traits<char> > >&}; _Tp = libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >; _Alloc = std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/CompressorObject.hpp:23,
from ./libmaus2/lz/SnappyCompressorObject.hpp:22,
from ./libmaus2/lz/SnappyCompressorObjectFactory.hpp:22,
from test/testsnappyconcat.cpp:22:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testConcat(const string&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/serialize/Serialize.hpp:28,
from ./libmaus2/bitio/BitVectorConcat.hpp:23,
from ./libmaus2/wavelet/ExternalWaveletGenerator.hpp:23,
from test/testWaveletExternal.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testImpExternalWaveletGenerator()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexLinearChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexBinChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testgunzip-testgunzip.o `test -f 'test/testgunzip.cpp' || echo './'`test/testgunzip.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::math::IntegerInterval<long long int>&}; _Tp = libmaus2::math::IntegerInterval<long long int>; _Alloc = std::allocator<libmaus2::math::IntegerInterval<long long int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::math::IntegerInterval<long long int>, std::allocator<libmaus2::math::IntegerInterval<long long int> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘uint64_t libmaus2::bambam::BamHeader::addChromosome(const string&, uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testhashcollisions-testhashcollisions.o `test -f 'test/testhashcollisions.cpp' || echo './'`test/testhashcollisions.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsimplebloomcollisions-testsimplebloomcollisions.o `test -f 'test/testsimplebloomcollisions.cpp' || echo './'`test/testsimplebloomcollisions.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>}; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Alloc = std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexBinChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::string libmaus2::aio::SingleFileFragmentMerge<_element_type>::merge(const string&, const std::vector<std::pair<long long unsigned int, long long unsigned int> >&) [with _element_type = libmaus2::bambam::BamIndexBinChunk]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>}; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Alloc = std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexLinearChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::string libmaus2::aio::SingleFileFragmentMerge<_element_type>::merge(const string&, const std::vector<std::pair<long long unsigned int, long long unsigned int> >&) [with _element_type = libmaus2::bambam::BamIndexLinearChunk]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from test/testhashcollisions.cpp:23:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from test/testhashcollisions.cpp:23:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void testHashCollisions()’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsimplehash-testsimplehash.o `test -f 'test/testsimplehash.cpp' || echo './'`test/testsimplehash.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsimplecountinghash-testsimplecountinghash.o `test -f 'test/testsimplecountinghash.cpp' || echo './'`test/testsimplecountinghash.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testcachealignedalloc-testcachealignedalloc.o `test -f 'test/testcachealignedalloc.cpp' || echo './'`test/testcachealignedalloc.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsyncfastreaderbase-testsyncfastreaderbase.o `test -f 'test/testsyncfastreaderbase.cpp' || echo './'`test/testsyncfastreaderbase.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testdl-testdl.o `test -f 'test/testdl.cpp' || echo './'`test/testdl.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from test/testbamwriter.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamIndexGenerator::addBlock(const uint8_t*, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::math::IntegerInterval<long long int>*, std::vector<libmaus2::math::IntegerInterval<long long int>, std::allocator<libmaus2::math::IntegerInterval<long long int> > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testdifenc-testdifenc.o `test -f 'test/testdifenc.cpp' || echo './'`test/testdifenc.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbwtmergeinternal-testbwtmergeinternal.o `test -f 'test/testbwtmergeinternal.cpp' || echo './'`test/testbwtmergeinternal.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testfastarewrite-testfastarewrite.o `test -f 'test/testfastarewrite.cpp' || echo './'`test/testfastarewrite.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testfastarecode-testfastarecode.o `test -f 'test/testfastarecode.cpp' || echo './'`test/testfastarecode.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testfastarewrite.cpp:3:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo&}; _Tp = libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo; _Alloc = std::allocator<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo, std::allocator<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo, std::allocator<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testfastarewrite.cpp:3:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::fastx::FastAReaderTemplate<_reader_base_type>::RewriteInfo> libmaus2::fastx::FastAReaderTemplate<_reader_base_type>::rewriteFilesToBuffer(const std::vector<std::__cxx11::basic_string<char> >&, buffer_type&) [with buffer_type = libmaus2::aio::SynchronousGenericOutput<char>; _reader_base_type = libmaus2::aio::SynchronousFastReaderBase]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo*, std::vector<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo, std::allocator<libmaus2::fastx::FastAReaderTemplate<libmaus2::aio::SynchronousFastReaderBase>::RewriteInfo> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbamtofastq-testbamtofastq.o `test -f 'test/testbamtofastq.cpp' || echo './'`test/testbamtofastq.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbamrange-testbamrange.o `test -f 'test/testbamrange.cpp' || echo './'`test/testbamrange.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbamdamage-testbamdamage.o `test -f 'test/testbamdamage.cpp' || echo './'`test/testbamdamage.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdamage.cpp:3:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdamage.cpp:3:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/lz/GzipHeader.hpp:22,
from ./libmaus2/lz/GzipSingleStream.hpp:22,
from ./libmaus2/lz/GzipStream.hpp:22,
from ./libmaus2/lz/GzipStreamWrapper.hpp:22,
from ./libmaus2/lz/BufferedGzipStream.hpp:22,
from test/testbamdamage.cpp:1:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamRangeDecoder.hpp:22,
from test/testbamrange.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testgamma-testgamma.o `test -f 'test/testgamma.cpp' || echo './'`test/testgamma.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testcompact-testcompact.o `test -f 'test/testcompact.cpp' || echo './'`test/testcompact.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<string_type, string_type> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbytetocompact-testbytetocompact.o `test -f 'test/testbytetocompact.cpp' || echo './'`test/testbytetocompact.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:26,
from test/testbamtofastq.cpp:19:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testscramtosam-testscramtosam.o `test -f 'test/testscramtosam.cpp' || echo './'`test/testscramtosam.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testpacdecode-testpacdecode.o `test -f 'test/testpacdecode.cpp' || echo './'`test/testpacdecode.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testutf8split-testutf8split.o `test -f 'test/testutf8split.cpp' || echo './'`test/testutf8split.cpp
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bitbtree::BitBTree<k, w>::mergeConstructionTuples(std::vector<libmaus2::bitbtree::BitBTree<k, w>::VectorConstructionTuple>&) [with unsigned int k = 8; unsigned int w = 8]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testcirchash-testcirchash.o `test -f 'test/testcirchash.cpp' || echo './'`test/testcirchash.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
test/testutf8split.cpp: In function ‘void testUtf8Seek(const string&)’:
test/testutf8split.cpp:146:26: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits]
146 | while ( (w=decwr.get()) >= 0 )
| ~~~~~~~~~~~~~~~~^~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Distance = int; _Tp = libmaus2::gamma::SparseGammaGapMultiFile; _Compare = __gnu_cxx::__ops::_Iter_comp_val<std::less<libmaus2::gamma::SparseGammaGapMultiFile> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testLow()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testRandom(unsigned int)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘bool libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::readAlignmentInternal(bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::init() [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::huffman::IndexEntry&}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamAlignmentSortingCircularHashEntryOverflow::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::huffman::IndexEntry}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::huffman::IndexEntry>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {libmaus2::huffman::IndexEntry}; _Tp = libmaus2::huffman::IndexEntry; _Alloc = std::allocator<libmaus2::huffman::IndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::SnappyAlignmentMergeInput::SnappyAlignmentMergeInput(const std::vector<std::pair<long long unsigned int, long long unsigned int> >&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::gamma::Interval}; _Tp = libmaus2::gamma::Interval; _Alloc = std::allocator<libmaus2::gamma::Interval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::Interval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::Interval>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::gamma::FlaggedInterval}; _Tp = libmaus2::gamma::FlaggedInterval; _Alloc = std::allocator<libmaus2::gamma::FlaggedInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::FlaggedInterval>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<long long unsigned int> libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder::getSplitKeys(libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder::this_type&, libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder::this_type&, uint64_t, uint64_t&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::gamma::SparseGammaGapFile&}; _Tp = libmaus2::gamma::SparseGammaGapFile; _Alloc = std::allocator<libmaus2::gamma::SparseGammaGapFile>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(const value_type&) [with _Tp = libmaus2::gamma::SparseGammaGapFile; _Sequence = std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> >; _Compare = std::less<libmaus2::gamma::SparseGammaGapFile>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::gamma::SparseGammaGapMultiFile&}; _Tp = libmaus2::gamma::SparseGammaGapMultiFile; _Alloc = std::allocator<libmaus2::gamma::SparseGammaGapMultiFile>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(const value_type&) [with _Tp = libmaus2::gamma::SparseGammaGapMultiFile; _Sequence = std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> >; _Compare = std::less<libmaus2::gamma::SparseGammaGapMultiFile>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_erase_aux(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2510:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
2510 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In member function ‘void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_erase_aux(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2510:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::CircularHashCollatingBamDecoder::CircularHashCollatingBamDecoder(libmaus2::bambam::BamAlignmentDecoder&, const string&, uint32_t, unsigned int, uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘typename libmaus2::gamma::SparseGammaGapMergeTemplate<_data_type>::SparseGammaGapMergeInfo* libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::queueMergeInfo(const libmaus2::gamma::SparseGammaGapMultiFile&, const libmaus2::gamma::SparseGammaGapMultiFile&) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘typename libmaus2::gamma::SparseGammaGapMergeTemplate<_data_type>::SparseGammaGapMergeInfo* libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::queueMergeInfo(const libmaus2::gamma::SparseGammaGapMultiFile&, const libmaus2::gamma::SparseGammaGapMultiFile&) [with _data_type = libmaus2::math::UnsignedInteger<4>]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::gamma::SparseGammaGapFileLevelSetTemplate<_data_type>::addFile(const string&) [with _data_type = libmaus2::math::UnsignedInteger<4>]’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammalevelmerge2()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammamerge2()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::gamma::GammaFlaggedIntervalDecoder::GammaFlaggedIntervalDecoder(const std::vector<std::__cxx11::basic_string<char> >&, uint64_t, libmaus2::gamma::GammaFlaggedIntervalDecoder::init_mode)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbamtofastq.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::huffman::HuffmanTreeInnerNode* const&>, std::tuple<>}; _Key = const libmaus2::huffman::HuffmanTreeInnerNode*; _Val = std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >; _Compare = std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>; _Alloc = std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeInnerNode::toDot(std::ostream&) const’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testflaggedintervalsingle()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::FlaggedInterval*, std::vector<libmaus2::gamma::FlaggedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/gamma/SparseGammaGapFileSet.hpp:25,
from test/testgamma.cpp:41:
./libmaus2/gamma/GammaGapEncoder.hpp: In member function ‘void libmaus2::gamma::GammaGapEncoder::encode(iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >]’:
./libmaus2/gamma/GammaGapEncoder.hpp:154:9: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
154 | void encode(iterator ita, uint64_t const n)
| ^~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::gamma::SparseGammaGapFileLevelSetTemplate<_data_type>::addFile(const string&) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long int; _Val = std::pair<const long long int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, long long unsigned int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammalevelmerge()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::FileTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::__cxx11::basic_string<char> >, std::_Select1st<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::__cxx11::basic_string<char> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::OutputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammamerge()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapFile*, std::vector<libmaus2::gamma::SparseGammaGapFile, std::allocator<libmaus2::gamma::SparseGammaGapFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::FileTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputStreamInstance> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from ./libmaus2/gamma/SparseGammaGapFileSet.hpp:25,
from test/testgamma.cpp:41:
./libmaus2/gamma/GammaGapEncoder.hpp: In function ‘void testgammagap()’:
./libmaus2/gamma/GammaGapEncoder.hpp:168:11: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
168 | encode(ita,n);
| ~~~~~~^~~~~~~
./libmaus2/gamma/GammaGapEncoder.hpp:168:11: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
168 | encode(ita,n);
| ~~~~~~^~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testintervalsingle()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
./libmaus2/autoarray/AutoArray.hpp: In function ‘void testpartitionsingle()’:
./libmaus2/autoarray/AutoArray.hpp:1909:5: warning: ‘<anonymous>’ may be used uninitialized in this function [-Wmaybe-uninitialized]
1909 | array[i] = N();
| ^~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::Interval*, std::vector<libmaus2::gamma::Interval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testflaggedpartitionsingle()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::FlaggedInterval*, std::vector<libmaus2::gamma::FlaggedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::wavelet::ImpHuffmanWaveletTree::init()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::checkMerge() [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static libmaus2::wavelet::ImpHuffmanWaveletTree::unique_ptr_type libmaus2::wavelet::ImpHuffmanWaveletTree::load(const string&, uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::__cxx11::basic_string<char> > libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::merge(const string&, uint64_t) [with _data_type = long long unsigned int]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In function ‘void testsparsegammamultifilesetmerge()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘void testsparsegammamultifilesetmergedense()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateIyE5mergeERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEy._omp_fn.0’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<long long unsigned int>::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::checkMerge() [with _data_type = libmaus2::math::UnsignedInteger<4>]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h:1216:14: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
1216 | _M_erase_aux(__position);
| ~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::__cxx11::basic_string<char> > libmaus2::gamma::SparseGammaGapMultiFileLevelSetTemplate<_data_type>::merge(const string&, uint64_t) [with _data_type = libmaus2::math::UnsignedInteger<4>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/huffman/IndexLoaderBase.hpp:25,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In function ‘void testsparsegammamultifilesetmerge2()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘void testsparsegammamultifilesetmergedense2()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> >, std::_Select1st<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::deque<libmaus2::gamma::SparseGammaGapMultiFile> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateINS_4math15UnsignedIntegerILj4EEEE5mergeERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEy._omp_fn.0’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::gamma::SparseGammaGapMergeTemplate<libmaus2::math::UnsignedInteger<4> >::SparseGammaGapMergeInfo> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘static std::vector<long long unsigned int> libmaus2::gamma::SparseGammaGapFileIndexMultiDecoder::getSplitKeys(const std::vector<std::__cxx11::basic_string<char> >&, const std::vector<std::__cxx11::basic_string<char> >&, uint64_t, uint64_t&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::wavelet::Utf8ToImpHuffmanWaveletTree::constructWaveletTree(const string&, const string&, libmaus2::huffman::HuffmanTreeNode::shared_ptr_type, uint64_t) [with bool radixsort = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammamultimerge2()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::wavelet::Utf8ToImpCompactHuffmanWaveletTree::constructWaveletTree(const string&, const string&, const libmaus2::huffman::HuffmanTree*, uint64_t) [with bool radixsort = true]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<_rank_type>::unique_ptr_type libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<_rank_type>::load(const string&, uint64_t) [with _rank_type = libmaus2::rank::ImpCacheLineRank]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testsparsegammamultimerge()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::gamma::SparseGammaGapMultiFile*, std::vector<libmaus2::gamma::SparseGammaGapMultiFile, std::allocator<libmaus2::gamma::SparseGammaGapMultiFile> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateIyE12mergeToDenseERNS_4util21TempFileNameGeneratorEyy._omp_fn.0’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::wavelet::ImpExternalWaveletGeneratorHuffman::ImpExternalWaveletGeneratorHuffman(const libmaus2::huffman::HuffmanTreeNode*, libmaus2::util::TempFileContainer&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testutf8split.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testUtf8Bwt(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
test/testutf8split.cpp:128:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
128 | }
| ^
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function ‘_ZN8libmaus25gamma39SparseGammaGapMultiFileLevelSetTemplateINS_4math15UnsignedIntegerILj4EEEE12mergeToDenseERNS_4util21TempFileNameGeneratorEyy._omp_fn.0’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testrmmtree-testrmmtree.o `test -f 'test/testrmmtree.cpp' || echo './'`test/testrmmtree.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static void libmaus2::gamma::GammaRLEncoder::concatenate(const std::vector<std::__cxx11::basic_string<char> >&, const string&, bool)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::huffman::IndexEntry*, std::vector<libmaus2::huffman::IndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/huffman/IndexLoaderBase.hpp:24,
from ./libmaus2/huffman/IndexDecoderDataArray.hpp:23,
from ./libmaus2/gamma/GammaPartitionDecoder.hpp:21,
from test/testgamma.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testgammarl()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testcst-testcst.o `test -f 'test/testcst.cpp' || echo './'`test/testcst.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bitbtree::BitBTree<k, w>::mergeConstructionTuples(std::vector<libmaus2::bitbtree::BitBTree<k, w>::VectorConstructionTuple>&) [with unsigned int k = 8; unsigned int w = 8]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamAlignmentSortingCircularHashEntryOverflow::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::SnappyAlignmentMergeInput::SnappyAlignmentMergeInput(const std::vector<std::pair<long long unsigned int, long long unsigned int> >&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::CircularHashCollatingBamDecoder::CircularHashCollatingBamDecoder(libmaus2::bambam::BamAlignmentDecoder&, const string&, uint32_t, unsigned int, uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::bambam::CircularHashCollatingBamDecoder::OutputBufferEntry* libmaus2::bambam::CircularHashCollatingBamDecoder::process()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbamcmp-testbamcmp.o `test -f 'test/testbamcmp.cpp' || echo './'`test/testbamcmp.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testcirchash.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::huffman::HuffmanTreeInnerNode* const&>, std::tuple<>}; _Key = const libmaus2::huffman::HuffmanTreeInnerNode*; _Val = std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >; _Compare = std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>; _Alloc = std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeInnerNode::toDot(std::ostream&) const’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::getOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::ostream& libmaus2::util::MemTempFileContainer::openOutputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual std::istream& libmaus2::util::MemTempFileContainer::openInputTempFile(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_istringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long long int; _Val = std::pair<const long long int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, long long unsigned int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<long long int, std::pair<const long long int, long long unsigned int>, std::_Select1st<std::pair<const long long int, long long unsigned int> >, std::less<long long int>, std::allocator<std::pair<const long long int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::wavelet::ImpHuffmanWaveletTree::init()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::wavelet::ImpHuffmanWaveletTree::ImpHuffmanWaveletTree(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::util::ImpCompactNumberArray::unique_ptr_type libmaus2::util::ImpCompactNumberArrayGenerator::createFinal()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::suffixtree::CompressedSuffixTree::Node&}; _Tp = libmaus2::suffixtree::CompressedSuffixTree::Node; _Alloc = std::allocator<libmaus2::suffixtree::CompressedSuffixTree::Node>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::suffixtree::CompressedSuffixTree::Node>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::suffixtree::CompressedSuffixTree::Node libmaus2::suffixtree::CompressedSuffixTree::child(const libmaus2::suffixtree::CompressedSuffixTree::Node&, int64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::suffixtree::CompressedSuffixTree::Node*, std::vector<libmaus2::suffixtree::CompressedSuffixTree::Node> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::wavelet::ImpExternalWaveletGeneratorHuffman::ImpExternalWaveletGeneratorHuffman(const libmaus2::huffman::HuffmanTreeNode*, libmaus2::util::TempFileContainer&)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<std::__cxx11::basic_ostringstream<char> > > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long int, long long unsigned int>}; _Tp = std::pair<long long int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolDepthVector(std::vector<std::pair<long long int, long long unsigned int> >&, uint64_t) const’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long int, long long unsigned int>*, std::vector<std::pair<long long int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bitio/CompactArray.hpp:23,
from ./libmaus2/util/ImpCompactNumberArray.hpp:24,
from ./libmaus2/rmq/RMMTree.hpp:22,
from test/testrmmtree.cpp:25:
/usr/include/c++/10/bits/vector.tcc: In function ‘int testImpCompactArray()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const libmaus2::huffman::HuffmanTreeInnerNode* const&>, std::tuple<>}; _Key = const libmaus2::huffman::HuffmanTreeInnerNode*; _Val = std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >; _Compare = std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>; _Alloc = std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeInnerNode::toDot(std::ostream&) const’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int testRMMTree()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
test/testrmmtree.cpp:86:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
86 | }
| ^
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::wavelet::ImpHuffmanWaveletTree::init()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<const libmaus2::huffman::HuffmanTreeInnerNode*, std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int>, std::_Select1st<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> >, std::less<const libmaus2::huffman::HuffmanTreeInnerNode*>, std::allocator<std::pair<const libmaus2::huffman::HuffmanTreeInnerNode* const, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcst.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::wavelet::ImpHuffmanWaveletTree::ImpHuffmanWaveletTree(stream_type&) [with stream_type = libmaus2::aio::InputStreamInstance]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<_rank_type>::unique_ptr_type libmaus2::wavelet::ImpCompactHuffmanWaveletTreeTemplate<_rank_type>::load(const string&, uint64_t) [with _rank_type = libmaus2::rank::ImpCacheLineRank]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbamdif-testbamdif.o `test -f 'test/testbamdif.cpp' || echo './'`test/testbamdif.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testqreorder-testqreorder.o `test -f 'test/testqreorder.cpp' || echo './'`test/testqreorder.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testfqbgzf-testfqbgzf.o `test -f 'test/testfqbgzf.cpp' || echo './'`test/testfqbgzf.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In function ‘std::vector<long long unsigned int> filter(const std::vector<long long unsigned int>&, uint64_t, unsigned int, unsigned int, unsigned int)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In function ‘std::vector<long long unsigned int> filter(const std::vector<long long unsigned int>&, uint64_t, unsigned int, unsigned int, unsigned int)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from test/testqreorder.cpp:22:
./libmaus2/fastx/QReorder.hpp: In constructor ‘libmaus2::fastx::QReorder4Set<_k, _value_type>::QReorder4Set(unsigned int, iterator, iterator, unsigned int) [with iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; unsigned int _k = 2; _value_type = long long unsigned int]’:
./libmaus2/fastx/QReorder.hpp:870:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
870 | QReorder4Set(unsigned int l, iterator ita, iterator ite, unsigned int const rlookupbits)
| ^~~~~~~~~~~~
./libmaus2/fastx/QReorder.hpp:870:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testqreorder.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In function ‘void testQReorder4Set()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testqreorder.cpp:102:68: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
102 | libmaus2::fastx::QReorder4Set<k,uint64_t> QR(l,V.begin(),V.end(),2);
| ^
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testcompactfastrandom-testcompactfastrandom.o `test -f 'test/testcompactfastrandom.cpp' || echo './'`test/testcompactfastrandom.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfThreadQueueElementHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from test/testfqbgzf.cpp:38:
./libmaus2/clustering/KMeans.hpp: In function ‘static std::vector<double> libmaus2::clustering::KMeans::kmeansCore(iterator, uint64_t, uint64_t, bool, uint64_t, double, const dissimilarity_type&) [with iterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; dissimilarity_type = libmaus2::clustering::KMeans::SquareDissimilary]’:
./libmaus2/clustering/KMeans.hpp:371:31: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
371 | static std::vector<double> kmeansCore(
| ^~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamcmp.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/fastx/FastQReader.hpp:27,
from ./libmaus2/fastx/StreamFastQReader.hpp:23,
from test/testfqbgzf.cpp:23:
./libmaus2/fastx/FastInterval.hpp: In static member function ‘static libmaus2::fastx::FastInterval libmaus2::fastx::FastInterval::merge(iterator, iterator) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >]’:
./libmaus2/fastx/FastInterval.hpp:85:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
85 | static FastInterval merge(iterator a, iterator e)
| ^~~~~
./libmaus2/fastx/FastInterval.hpp:85:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::fastx::FastInterval&}; _Tp = libmaus2::fastx::FastInterval; _Alloc = std::allocator<libmaus2::fastx::FastInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::lz::BgzfThreadQueueElement&}; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Alloc = std::allocator<libmaus2::lz::BgzfThreadQueueElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::parallel::StdSynchronousConsecutiveHeap<value_type, info_type, compare>::drainPreQueue(glob_queue_type*) [with glob_queue_type = libmaus2::parallel::StdTerminatableSynchronousHeap<libmaus2::lz::BgzfThreadQueueElement, libmaus2::lz::BgzfThreadQueueElementHeapComparator>; value_type = libmaus2::lz::BgzfThreadQueueElement; info_type = libmaus2::lz::BgzfDeflateBlockIdInfo; compare = libmaus2::lz::BgzfDeflateBlockIdComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfDeflateParallel::drain()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfDeflateParallel::flushInternal()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::lz::BgzfDeflateParallelThreadCallable::run()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StringSerialisation.hpp:27,
from ./libmaus2/aio/FileFragment.hpp:26,
from ./libmaus2/aio/ReorderConcatGenericInput.hpp:24,
from ./libmaus2/fastx/CompactFastDecoder.hpp:23,
from test/testcompactfastrandom.cpp:1:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::fastx::FastInterval&}; _Tp = libmaus2::fastx::FastInterval; _Alloc = std::allocator<libmaus2::fastx::FastInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::aio::FileFragment}; _Tp = libmaus2::aio::FileFragment; _Alloc = std::allocator<libmaus2::aio::FileFragment>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::aio::FileFragment>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<libmaus2::aio::FileFragment> libmaus2::fastx::CompactFastDecoder::getDataFragments(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::aio::FileFragment*, std::vector<libmaus2::aio::FileFragment> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::fastx::FastInterval}; _Tp = libmaus2::fastx::FastInterval; _Alloc = std::allocator<libmaus2::fastx::FastInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from test/testfqbgzf.cpp:38:
./libmaus2/clustering/KMeans.hpp: In function ‘int main(int, char**)’:
./libmaus2/clustering/KMeans.hpp:527:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
527 | std::vector<double> R = kmeansCore(V,n,k,pp,maxloops,ethres,dissimilarity);
| ^
./libmaus2/clustering/KMeans.hpp:532:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
532 | std::vector<double> RC = kmeansCore(V,n,k,pp,maxloops,ethres,dissimilarity);
| ^~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testfqbgzf.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testfqbgzf.cpp:288:75: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
288 | indexCOS << libmaus2::fastx::FastInterval::merge(FIV.begin(),FIV.end()).serialise();
| ^
test/testfqbgzf.cpp:298:74: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
298 | indexCOS << libmaus2::fastx::FastInterval::merge(FIV.begin(),FIV.end()).serialise();
| ^
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::fastx::CompactFastConcatRandomAccessAdapter::CompactFastConcatRandomAccessAdapter(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StringSerialisation.hpp:27,
from ./libmaus2/aio/FileFragment.hpp:26,
from ./libmaus2/aio/ReorderConcatGenericInput.hpp:24,
from ./libmaus2/fastx/CompactFastDecoder.hpp:23,
from test/testcompactfastrandom.cpp:1:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbamindex-testbamindex.o `test -f 'test/testbamindex.cpp' || echo './'`test/testbamindex.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbamrewrite-testbamrewrite.o `test -f 'test/testbamrewrite.cpp' || echo './'`test/testbamrewrite.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testfastqstream-testfastqstream.o `test -f 'test/testfastqstream.cpp' || echo './'`test/testfastqstream.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbamdif.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/fastx/CharBuffer.hpp:22,
from ./libmaus2/aio/SynchronousFastReaderBase.hpp:24,
from ./libmaus2/fastx/FastQReader.hpp:23,
from ./libmaus2/fastx/StreamFastQReader.hpp:23,
from test/testfastqstream.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::fastx::FastInterval}; _Tp = libmaus2::fastx::FastInterval; _Alloc = std::allocator<libmaus2::fastx::FastInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘void countReadsGzipFastqBlocks(const string&, const string&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘void decodeGzipFastqBlocks(const string&, const string&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastInterval*, std::vector<libmaus2::fastx::FastInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsort-testsort.o `test -f 'test/testsort.cpp' || echo './'`test/testsort.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testexternalsort-testexternalsort.o `test -f 'test/testexternalsort.cpp' || echo './'`test/testexternalsort.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfThreadQueueElementHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexLinearChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexBinChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testexternalsort.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::MergingReadBack<long long unsigned int, std::less<long long unsigned int> >::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/aio/BufferedOutput.hpp:23,
from ./libmaus2/sorting/MergingReadBack.hpp:23,
from ./libmaus2/sorting/SortingBufferedOutputFile.hpp:22,
from test/testexternalsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::aio::SortingBufferedOutput<_data_type, _order_type>::writeBuffer() [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::MergingReadBack<_data_type, _order_type>::MergingReadBack(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::vector<long long unsigned int> libmaus2::sorting::MergingReadBack<_data_type, _order_type>::mergeStep(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int main()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
test/testexternalsort.cpp:47:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
47 | }
| ^
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::math::IntegerInterval<long long int>&}; _Tp = libmaus2::math::IntegerInterval<long long int>; _Alloc = std::allocator<libmaus2::math::IntegerInterval<long long int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::math::IntegerInterval<long long int>, std::allocator<libmaus2::math::IntegerInterval<long long int> > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::lz::BgzfThreadQueueElement&}; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Alloc = std::allocator<libmaus2::lz::BgzfThreadQueueElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::parallel::StdTerminatableSynchronousHeap<_value_type, _compare>::enque(libmaus2::parallel::StdTerminatableSynchronousHeap<_value_type, _compare>::value_type) [with _value_type = libmaus2::lz::BgzfThreadQueueElement; _compare = libmaus2::lz::BgzfThreadQueueElementHeapComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfInflateDeflateParallel::drain()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfInflateDeflateParallel::write(const char*, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testcollatespeed-testcollatespeed.o `test -f 'test/testcollatespeed.cpp' || echo './'`test/testcollatespeed.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfInflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::lz::BgzfInflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::lz::BgzfDispatchDecompressBlock::decompressBlock(libmaus2::lz::BgzfInflateParallelContext&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::lz::BgzfDispatchCompressBlock::compressBlock(libmaus2::lz::BgzfDeflateParallelContext&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::lz::BgzfDispatchWriteBlock::writeBlock(libmaus2::lz::BgzfDeflateParallelContext&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamParallelRewrite.hpp:23,
from test/testbamrewrite.cpp:21:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>}; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Alloc = std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexBinChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexBinChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfInflateParallelContext::init()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::string libmaus2::aio::SingleFileFragmentMerge<_element_type>::merge(const string&, const std::vector<std::pair<long long unsigned int, long long unsigned int> >&) [with _element_type = libmaus2::bambam::BamIndexBinChunk]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexBinChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>}; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Alloc = std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >; _Distance = int; _Tp = std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::aio::SingleFileFragmentMerge<libmaus2::bambam::BamIndexLinearChunk>::SingleFileFragmentMergeHeapComparator<libmaus2::bambam::BamIndexLinearChunk> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In static member function ‘static std::string libmaus2::aio::SingleFileFragmentMerge<_element_type>::merge(const string&, const std::vector<std::pair<long long unsigned int, long long unsigned int> >&) [with _element_type = libmaus2::bambam::BamIndexLinearChunk]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>*, std::vector<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk>, std::allocator<std::pair<long long unsigned int, libmaus2::bambam::BamIndexLinearChunk> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamParallelRewrite.hpp:23,
from test/testbamrewrite.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamIndexGenerator.hpp:31,
from test/testbamindex.cpp:21:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateDeflateParallelInputStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/GetFileSize.hpp:26,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<PSC>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/GetFileSize.hpp:26,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<PSC>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamIndexGenerator.hpp:31,
from test/testbamindex.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long int&}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::huffman::HuffmanTreeLeaf::symbolVector(std::vector<long long int>&) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testbamindex.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamIndexGenerator::addBlock.constprop(const uint8_t*, uint64_t, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::math::IntegerInterval<long long int>*, std::vector<libmaus2::math::IntegerInterval<long long int>, std::allocator<libmaus2::math::IntegerInterval<long long int> > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::gamma::GammaPDIndexDecoder::GammaPDIndexDecoder(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::sorting::MergeStepBinSearchResult::mergeSplitVector(iterator, iterator, iterator, iterator, order_type, uint64_t) [with iterator = long long unsigned int*; order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::huffman::LFRankPosIndexDecoder::LFRankPosIndexDecoder(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/GetFileSize.hpp:26,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<PSC>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, std::less<long long unsigned int> >}; _Tp = libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, std::less<long long unsigned int> >; _Alloc = std::allocator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, std::less<long long unsigned int> > >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, std::less<long long unsigned int> >, std::allocator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, std::less<long long unsigned int> > > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, std::less<long long unsigned int> >, std::allocator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, std::less<long long unsigned int> > > >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::ParallelStableSort::ParallelSortControl<_iterator, _order_type>::ParallelSortControl(libmaus2::sorting::ParallelStableSort::ParallelSortControl<_iterator, _order_type>::iterator, libmaus2::sorting::ParallelStableSort::ParallelSortControl<_iterator, _order_type>::iterator, libmaus2::sorting::ParallelStableSort::ParallelSortControl<_iterator, _order_type>::iterator, libmaus2::sorting::ParallelStableSort::ParallelSortControl<_iterator, _order_type>::iterator, const order_type&, uint64_t, bool) [with _iterator = long long unsigned int*; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, std::less<long long unsigned int> >*, std::vector<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, std::less<long long unsigned int> >, std::allocator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, std::less<long long unsigned int> > > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/GetFileSize.hpp:26,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbamheaderparser-testbamheaderparser.o `test -f 'test/testbamheaderparser.cpp' || echo './'`test/testbamheaderparser.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = unsigned int*; order_type = std::less<unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<unsigned int*, std::less<unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::SecondComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>}; _Tp = libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>; _Alloc = std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘static void libmaus2::sorting::InPlaceParallelSort::mergestepRecLevel(iterator, uint64_t, uint64_t, order_type, base_sort&, int, int, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<iterator, order_type, base_sort> >&, uint64_t) [with iterator = std::pair<long long unsigned int, long long unsigned int>*; order_type = libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>; base_sort = libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>*, std::vector<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort>, std::allocator<libmaus2::sorting::InPlaceParallelSort::MergeStepRecSerialRequest<std::pair<long long unsigned int, long long unsigned int>*, libmaus2::sorting::PairFileSorting::FirstComp<long long unsigned int, long long unsigned int>, libmaus2::sorting::InPlaceParallelSort::FixedSizeBaseSort> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>&}; _Tp = libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>; _Alloc = std::allocator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘void testMultiSort()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbammergecoordinate-testbammergecoordinate.o `test -f 'test/testbammergecoordinate.cpp' || echo './'`test/testbammergecoordinate.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/GetFileSize.hpp:25,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleFirstComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static uint64_t libmaus2::sorting::PairFileSorting::reduce(const string&, uint64_t, uint64_t, out_type&, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static void libmaus2::sorting::PairFileSorting::mergeTriplesTemplate(uint64_t, const string&, uint64_t, out_type&, uint64_t, std::ostream*) [with comparator_type = libmaus2::sorting::PairFileSorting::TripleSecondComparator<long long unsigned int, long long unsigned int, long long unsigned int>; out_type = libmaus2::aio::SynchronousGenericOutput<long long unsigned int>; bool keepfirst = true; bool keepsecond = true]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int>*, std::vector<libmaus2::sorting::PairFileSorting::Triple<long long unsigned int, long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/GetFileSize.hpp:26,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/huffman/LFSupportBitDecoder.hpp:21,
from ./libmaus2/huffman/LFSupportDecoder.hpp:21,
from test/testsort.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void testpairfilesorting(uint64_t)’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void testpairfilesortingSecond(uint64_t)’:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbammergecollate-testbammergecollate.o `test -f 'test/testbammergecollate.cpp' || echo './'`test/testbammergecollate.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bitbtree::BitBTree<k, w>::mergeConstructionTuples(std::vector<libmaus2::bitbtree::BitBTree<k, w>::VectorConstructionTuple>&) [with unsigned int k = 8; unsigned int w = 8]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamAlignmentSortingCircularHashEntryOverflow::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::SnappyAlignmentMergeInput::SnappyAlignmentMergeInput(const std::vector<std::pair<long long unsigned int, long long unsigned int> >&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘libmaus2::bambam::CircularHashCollatingBamDecoder::OutputBufferEntry* libmaus2::bambam::CircularHashCollatingBamDecoder::process()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbammergequeryname-testbammergequeryname.o `test -f 'test/testbammergequeryname.cpp' || echo './'`test/testbammergequeryname.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testcollatespeed.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testcollatespeed.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbamcat-testbamcat.o `test -f 'test/testbamcat.cpp' || echo './'`test/testbamcat.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<_FIter, _FIter> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::set<long long unsigned int>; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from test/testbammergecoordinate.cpp:20:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from test/testbammergecoordinate.cpp:20:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<string_type, string_type> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<_FIter, _FIter> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::init() [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In member function ‘bool libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::readAlignmentInternal(bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::set<long long unsigned int>; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:26,
from test/testbammergecollate.cpp:19:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamMergeQueryName.hpp:22,
from test/testbammergequeryname.cpp:20:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamAlignmentHeapComparator<libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from test/testbammergecoordinate.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamMergeQueyNameHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamMergeQueyNameHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple}; _Tp = libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple; _Alloc = std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamMergeQueryName.hpp:22,
from test/testbammergequeryname.cpp:20:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::BamMergeTemplate(const std::vector<std::__cxx11::basic_string<char> >&, bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<_FIter, _FIter> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergecoordinate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testbammergecoordinate.cpp:68:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
68 | }
| ^
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bitbtree::BitBTree<k, w>::mergeConstructionTuples(std::vector<libmaus2::bitbtree::BitBTree<k, w>::VectorConstructionTuple>&) [with unsigned int k = 8; unsigned int w = 8]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::set<long long unsigned int>; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamCat.hpp:22,
from test/testbamcat.cpp:20:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In member function ‘bool libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::readAlignmentInternal(bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeQueyNameHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsQueryNameSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘bool libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::readAlignmentInternal(bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::init() [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamMergeQueryName.hpp:22,
from test/testbammergequeryname.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamAlignmentSortingCircularHashEntryOverflow::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamCat.hpp:22,
from test/testbamcat.cpp:20:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::SnappyAlignmentMergeInput::SnappyAlignmentMergeInput(const std::vector<std::pair<long long unsigned int, long long unsigned int> >&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::CircularHashCollatingBamDecoder::CircularHashCollatingBamDecoder(libmaus2::bambam::BamAlignmentDecoder&, const string&, uint32_t, unsigned int, uint64_t)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple*, std::vector<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple, std::allocator<libmaus2::bitbtree::BitBTree<8, 8>::VectorConstructionTuple> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testautoarray2d-testautoarray2d.o `test -f 'test/testautoarray2d.cpp' || echo './'`test/testautoarray2d.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::BamMergeTemplate(const std::vector<std::__cxx11::basic_string<char> >&, bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeQueyNameHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsQueryNameSorted]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamMergeQueryName.hpp:23,
from test/testbammergequeryname.cpp:20:
./libmaus2/bambam/BamMergeTemplate.hpp:163:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
163 | }
| ^
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbammergequeryname.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
test/testbammergequeryname.cpp:68:1: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
68 | }
| ^
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentFilter.hpp:22,
from ./libmaus2/bambam/CircularHashCollatingBamDecoder.hpp:22,
from test/testbammergecollate.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::BamMergeTemplate(const std::vector<std::__cxx11::basic_string<char> >&, bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testhist-testhist.o `test -f 'test/testhist.cpp' || echo './'`test/testhist.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamCatHeader.hpp:22,
from ./libmaus2/bambam/BamCat.hpp:22,
from test/testbamcat.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testfastaparse-testfastaparse.o `test -f 'test/testfastaparse.cpp' || echo './'`test/testfastaparse.cpp
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::BamCatHeader::BamCatHeader(const std::vector<std::__cxx11::basic_string<char> >&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testbamcat.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testvalidatebamindex-testvalidatebamindex.o `test -f 'test/testvalidatebamindex.cpp' || echo './'`test/testvalidatebamindex.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testeditdistance-testeditdistance.o `test -f 'test/testeditdistance.cpp' || echo './'`test/testeditdistance.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsimplethreadpool-testsimplethreadpool.o `test -f 'test/testsimplethreadpool.cpp' || echo './'`test/testsimplethreadpool.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsimplethreadpoolbamdecode-testsimplethreadpoolbamdecode.o `test -f 'test/testsimplethreadpoolbamdecode.cpp' || echo './'`test/testsimplethreadpoolbamdecode.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testgaparraybyte-testgaparraybyte.o `test -f 'test/testgaparraybyte.cpp' || echo './'`test/testgaparraybyte.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testzlibconcat-testzlibconcat.o `test -f 'test/testzlibconcat.cpp' || echo './'`test/testzlibconcat.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/CompressorObject.hpp:23,
from ./libmaus2/lz/ZlibCompressorObject.hpp:22,
from ./libmaus2/lz/ZlibCompressorObjectFactory.hpp:22,
from test/testzlibconcat.cpp:22:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char, std::char_traits<char> > >&}; _Tp = libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >; _Alloc = std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/CompressorObject.hpp:23,
from ./libmaus2/lz/ZlibCompressorObject.hpp:22,
from ./libmaus2/lz/ZlibCompressorObjectFactory.hpp:22,
from test/testzlibconcat.cpp:22:
/usr/include/c++/10/bits/stl_vector.h: In function ‘void testConcat(const string&, const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >*, std::vector<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> >, std::allocator<libmaus2::lz::SimpleCompressedConcatInputStreamFragment<std::basic_istream<char> > > > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsimplecompressblock-testsimplecompressblock.o `test -f 'test/testsimplecompressblock.cpp' || echo './'`test/testsimplecompressblock.cpp
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamIndexGenerator.hpp:31,
from test/testvalidatebamindex.cpp:21:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
test/testsimplethreadpoolbamdecode.cpp: In instantiation of ‘void BamThreadPoolDecodeBamParsePackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
test/testsimplethreadpoolbamdecode.cpp:920:15: required from here
test/testsimplethreadpoolbamdecode.cpp:977:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
977 | while ( (pc-pa >= 4) && ((pc-pa) >= (4+(lblocksize=decodeLittleEndianInteger<4>(pa)) )) )
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testsimplethreadpoolbamdecode.cpp: In instantiation of ‘void BamThreadPoolDecodeBamParsePackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
test/testsimplethreadpoolbamdecode.cpp:920:15: required from here
test/testsimplethreadpoolbamdecode.cpp:977:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
test/testsimplethreadpoolbamdecode.cpp: In instantiation of ‘void BamThreadPoolMergeProcessPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
test/testsimplethreadpoolbamdecode.cpp:2727:15: required from here
test/testsimplethreadpoolbamdecode.cpp:2786:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2786 | (pe-pc) >= (4+(parserState.blocklen=decodeLEInteger4(pc)))
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testsimplethreadpoolbamdecode.cpp:2794:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2794 | (pe-pc) >= (4+(parserState.blocklen=decodeLEInteger4(pc)))
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testsimplethreadpoolbamdecode.cpp: In instantiation of ‘void BamThreadPoolMergeProcessPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
test/testsimplethreadpoolbamdecode.cpp:2727:15: required from here
test/testsimplethreadpoolbamdecode.cpp:2786:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2786 | (pe-pc) >= (4+(parserState.blocklen=decodeLEInteger4(pc)))
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
test/testsimplethreadpoolbamdecode.cpp:2794:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2794 | (pe-pc) >= (4+(parserState.blocklen=decodeLEInteger4(pc)))
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamIndexGenerator.hpp:31,
from test/testvalidatebamindex.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamIndexBin.hpp:22,
from ./libmaus2/bambam/BamIndexRef.hpp:22,
from ./libmaus2/bambam/BamIndex.hpp:22,
from test/testvalidatebamindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from test/testgaparraybyte.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘_Z16testGapArrayBytev._omp_fn.0’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/GetFileSize.hpp:26,
from ./libmaus2/aio/SynchronousGenericInput.hpp:23,
from ./libmaus2/suffixsort/GapArrayByteDecoder.hpp:24,
from ./libmaus2/suffixsort/GapArrayByteDecoderBuffer.hpp:22,
from ./libmaus2/suffixsort/GapArrayByte.hpp:22,
from test/testgaparraybyte.cpp:24:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::sorting::MergingReadBack<long long unsigned int>::HeapOrderAdapter>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from test/testgaparraybyte.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘bool libmaus2::sorting::MergingReadBack<_data_type, _order_type>::getNext(libmaus2::sorting::MergingReadBack<_data_type, _order_type>::data_type&) [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::sorting::MergingReadBack<_data_type, _order_type>::MergingReadBack(const string&, const std::vector<long long unsigned int>&, uint64_t, uint64_t) [with _data_type = long long unsigned int; _order_type = std::less<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::suffixsort::GapArrayByte::flush()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from test/testgaparraybyte.cpp:24:
./libmaus2/suffixsort/GapArrayByte.hpp:170:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
170 | }
| ^
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/SimpleCompressedInputBlockConcat.hpp:22,
from test/testsimplecompressblock.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::lz::SimpleCompressedStreamNamedInterval}; _Tp = libmaus2::lz::SimpleCompressedStreamNamedInterval; _Alloc = std::allocator<libmaus2::lz::SimpleCompressedStreamNamedInterval>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘void testConcatInputBlock()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedStreamNamedInterval*, std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedStreamNamedInterval*, std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedStreamNamedInterval*, std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::SimpleCompressedStreamNamedInterval*, std::vector<libmaus2::lz::SimpleCompressedStreamNamedInterval> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testfaindex-testfaindex.o `test -f 'test/testfaindex.cpp' || echo './'`test/testfaindex.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testfastablockrecode-testfastablockrecode.o `test -f 'test/testfastablockrecode.cpp' || echo './'`test/testfastablockrecode.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testhttp-testhttp.o `test -f 'test/testhttp.cpp' || echo './'`test/testhttp.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/fastx/FastAIndex.hpp:22,
from test/testfaindex.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::fastx::FastAIndexEntry}; _Tp = libmaus2::fastx::FastAIndexEntry; _Alloc = std::allocator<libmaus2::fastx::FastAIndexEntry>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::fastx::FastAIndexEntry>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::fastx::FastAIndex::FastAIndex(std::istream&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::fastx::FastAIndexEntry*, std::vector<libmaus2::fastx::FastAIndexEntry> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<BamThreadPoolMergeWritePendingInfo*, std::vector<BamThreadPoolMergeWritePendingInfo> >; _Distance = int; _Tp = BamThreadPoolMergeWritePendingInfo; _Compare = __gnu_cxx::__ops::_Iter_comp_val<BamThreadPoolMergeWritePendingInfoHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolMergeWritePendingInfo*, std::vector<BamThreadPoolMergeWritePendingInfo> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testftp-testftp.o `test -f 'test/testftp.cpp' || echo './'`test/testftp.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamSeqEncodeTable.hpp:22,
from ./libmaus2/fastx/FastABPGenerator.hpp:22,
from test/testfastablockrecode.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testrlhist-testrlhist.o `test -f 'test/testrlhist.cpp' || echo './'`test/testrlhist.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamSeqEncodeTable.hpp:22,
from ./libmaus2/fastx/FastABPGenerator.hpp:22,
from test/testfastablockrecode.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In function ‘static uint64_t libmaus2::fastx::FastABPGenerator::fastAToFastaBP(std::istream&, std::ostream&, std::ostream*, uint64_t)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/bambam/BamSeqEncodeTable.hpp:22,
from ./libmaus2/fastx/FastABPGenerator.hpp:22,
from test/testfastablockrecode.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testnumcpus-testnumcpus.o `test -f 'test/testnumcpus.cpp' || echo './'`test/testnumcpus.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testdiag-testdiag.o `test -f 'test/testdiag.cpp' || echo './'`test/testdiag.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testlowmembamheaderparser-testlowmembamheaderparser.o `test -f 'test/testlowmembamheaderparser.cpp' || echo './'`test/testlowmembamheaderparser.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testgeneflatfile-testgeneflatfile.o `test -f 'test/testgeneflatfile.cpp' || echo './'`test/testgeneflatfile.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const BamThreadPoolDecodeBamParseQueueInfo&}; _Tp = BamThreadPoolDecodeBamParseQueueInfo; _Alloc = std::allocator<BamThreadPoolDecodeBamParseQueueInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<BamThreadPoolDecodeBamParseQueueInfo, std::allocator<BamThreadPoolDecodeBamParseQueueInfo> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const BamThreadPoolMergeProcessBufferInfo&}; _Tp = BamThreadPoolMergeProcessBufferInfo; _Alloc = std::allocator<BamThreadPoolMergeProcessBufferInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<BamThreadPoolMergeProcessBufferInfo>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, const unsigned char*>}; _Tp = std::pair<long long unsigned int, const unsigned char*>; _Alloc = std::allocator<std::pair<long long unsigned int, const unsigned char*> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, const unsigned char*> >::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair<long long unsigned int, const unsigned char*>; _Sequence = std::vector<std::pair<long long unsigned int, const unsigned char*> >; _Compare = BamThreadPoolMergeHeapComparator<libmaus2::bambam::BamAlignmentNameComparator>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const unsigned char*>*, std::vector<std::pair<long long unsigned int, const unsigned char*> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(std::priority_queue<_Tp, _Sequence, _Compare>::value_type&&) [with _Tp = std::pair<long long unsigned int, const unsigned char*>; _Sequence = std::vector<std::pair<long long unsigned int, const unsigned char*> >; _Compare = BamThreadPoolMergeHeapComparator<libmaus2::bambam::BamAlignmentPosComparator>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const unsigned char*>*, std::vector<std::pair<long long unsigned int, const unsigned char*> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::sorting::ParallelStableSort::MergeLevel<iterator, order_type>::dispatch() [with iterator = long long unsigned int*; order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentNameComparator>}; _Tp = libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentNameComparator>; _Alloc = std::allocator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentNameComparator> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentNameComparator>, std::allocator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentNameComparator> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::sorting::ParallelStableSort::MergeLevel<iterator, order_type>::dispatch() [with iterator = long long unsigned int*; order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentPosComparator>}; _Tp = libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentPosComparator>; _Alloc = std::allocator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentPosComparator> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentPosComparator>, std::allocator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentPosComparator> > >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void BamThreadPoolDecodeBamProcessPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentNameComparator>*, std::vector<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentNameComparator>, std::allocator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentNameComparator> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolDecodeDecompressPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolDecodeBamParseQueueInfo*, std::vector<BamThreadPoolDecodeBamParseQueueInfo, std::allocator<BamThreadPoolDecodeBamParseQueueInfo> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void BamThreadPoolDecodeBamProcessPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentPosComparator>*, std::vector<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentPosComparator>, std::allocator<libmaus2::sorting::ParallelStableSort::MergeLevel<long long unsigned int*, libmaus2::bambam::BamAlignmentPosComparator> > > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolDecodeDecompressPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolDecodeBamParseQueueInfo*, std::vector<BamThreadPoolDecodeBamParseQueueInfo, std::allocator<BamThreadPoolDecodeBamParseQueueInfo> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testurlinputstream-testurlinputstream.o `test -f 'test/testurlinputstream.cpp' || echo './'`test/testurlinputstream.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsimpletrie-testsimpletrie.o `test -f 'test/testsimpletrie.cpp' || echo './'`test/testsimpletrie.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testgnutls-testgnutls.o `test -f 'test/testgnutls.cpp' || echo './'`test/testgnutls.cpp
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testlru-testlru.o `test -f 'test/testlru.cpp' || echo './'`test/testlru.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolMergeProcessPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolMergeProcessBufferInfo*, std::vector<BamThreadPoolMergeProcessBufferInfo> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const unsigned char*>*, std::vector<std::pair<long long unsigned int, const unsigned char*> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolMergeProcessPackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolMergeProcessBufferInfo*, std::vector<BamThreadPoolMergeProcessBufferInfo> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from test/testlowmembamheaderparser.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamHeaderLowMem::setupFromText()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testlowmembamheaderparser.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from test/testlowmembamheaderparser.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp:71:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
71 | unique_ptr_type u(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamAlignmentDecoder.hpp:24,
from test/testlowmembamheaderparser.cpp:20:
./libmaus2/bambam/BamHeaderLowMem.hpp:804:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
804 | }
| ^
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > > >::const_iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbytecnt-testbytecnt.o `test -f 'test/testbytecnt.cpp' || echo './'`test/testbytecnt.cpp
In file included from /usr/include/c++/10/unordered_map:46,
from ./libmaus2/util/unordered_map.hpp:25,
from ./libmaus2/lru/SparseLRU.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:24,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/hashtable.h: In member function ‘std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::iterator std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::erase(std::_Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal, _H1, _H2, _Hash, _RehashPolicy, _Traits>::const_iterator) [with _Key = long long unsigned int; _Value = std::pair<const long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, long long unsigned int> >; _ExtractKey = std::__detail::_Select1st; _Equal = std::equal_to<long long unsigned int>; _H1 = std::hash<long long unsigned int>; _H2 = std::__detail::_Mod_range_hashing; _Hash = std::__detail::_Default_ranged_hash; _RehashPolicy = std::__detail::_Prime_rehash_policy; _Traits = std::__detail::_Hashtable_traits<false, false, true>]’:
/usr/include/c++/10/bits/hashtable.h:1851:5: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
1851 | _Hashtable<_Key, _Value, _Alloc, _ExtractKey, _Equal,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1852 | _H1, _H2, _Hash, _RehashPolicy, _Traits>::
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/hashtable.h: In member function ‘void libmaus2::lru::SparseLRUFileBunch::remove(uint64_t)’:
/usr/include/c++/10/bits/hashtable.h:807:21: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
807 | { return erase(const_iterator(__it)); }
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘int64_t libmaus2::lru::SparseLRU::get(uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/unordered_map:46,
from ./libmaus2/util/unordered_map.hpp:25,
from ./libmaus2/lru/SparseLRU.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:24,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/hashtable.h:807:21: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
807 | { return erase(const_iterator(__it)); }
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/unordered_map:46,
from ./libmaus2/util/unordered_map.hpp:25,
from ./libmaus2/lru/SparseLRU.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:24,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/hashtable.h:807:21: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
807 | { return erase(const_iterator(__it)); }
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘libmaus2::aio::InputOutputStream& libmaus2::lru::SparseLRUFileBunch::operator[](uint64_t)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::aio::InputOutputStream> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In function ‘int main()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/unordered_map:46,
from ./libmaus2/util/unordered_map.hpp:25,
from ./libmaus2/lru/SparseLRU.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:24,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/hashtable.h:807:21: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
807 | { return erase(const_iterator(__it)); }
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/aio/PosixFdInputOutputStreamBuffer.hpp:26,
from ./libmaus2/aio/PosixFdInputOutputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputOutputStreamFactory.hpp:23,
from ./libmaus2/aio/InputOutputStreamFactoryContainer.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:22,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::_Select1st<std::pair<const long long unsigned int, long long unsigned int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/unordered_map:46,
from ./libmaus2/util/unordered_map.hpp:25,
from ./libmaus2/lru/SparseLRU.hpp:23,
from ./libmaus2/lru/SparseLRUFileBunch.hpp:24,
from test/testlru.cpp:19:
/usr/include/c++/10/bits/hashtable.h:807:21: note: parameter passing for argument of type ‘std::_Hashtable<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::allocator<std::pair<const long long unsigned int, long long unsigned int> >, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’ {aka ‘std::__detail::_Hashtable_base<long long unsigned int, std::pair<const long long unsigned int, long long unsigned int>, std::__detail::_Select1st, std::equal_to<long long unsigned int>, std::hash<long long unsigned int>, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Hashtable_traits<false, false, true> >::const_iterator’} changed in GCC 7.1
807 | { return erase(const_iterator(__it)); }
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/teststronglyconnectedcomponents-teststronglyconnectedcomponents.o `test -f 'test/teststronglyconnectedcomponents.cpp' || echo './'`test/teststronglyconnectedcomponents.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testtopologicalsorting-testtopologicalsorting.o `test -f 'test/testtopologicalsorting.cpp' || echo './'`test/testtopologicalsorting.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void BamThreadPoolMergeMergePackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const unsigned char*>*, std::vector<std::pair<long long unsigned int, const unsigned char*> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const unsigned char*>*, std::vector<std::pair<long long unsigned int, const unsigned char*> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:26,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:26,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testlinebuffer-testlinebuffer.o `test -f 'test/testlinebuffer.cpp' || echo './'`test/testlinebuffer.cpp
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:23,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/set:60,
from ./libmaus2/graph/ReachableVertices.hpp:22,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:22,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/graph/ReachableVertices.hpp:24,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/graph/ReachableVertices.hpp:23,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In function ‘static std::pair<bool, std::map<long long unsigned int, long long unsigned int> > libmaus2::graph::TopologicalSorting::topologicalSorting(const std::map<long long unsigned int, std::vector<edge_type> >&, uint64_t, projector_type) [with edge_type = long long unsigned int; projector_type = libmaus2::graph::IdentityTargetProjector]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/graph/ReachableVertices.hpp:24,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/graph/ReachableVertices.hpp:23,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:23,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In function ‘void testStronglyConnectedComponents()’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:26,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:23,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:22,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:23,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::vector<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:22,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:26,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/graph/StronglyConnectedComponents.hpp:22,
from test/teststronglyconnectedcomponents.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/graph/ReachableVertices.hpp:24,
from ./libmaus2/graph/TopologicalSorting.hpp:22,
from test/testtopologicalsorting.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function ‘void testTopologicalSortingAcyclic()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function ‘void testTopologicalSortingCyclic()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsamdecoder-testsamdecoder.o `test -f 'test/testsamdecoder.cpp' || echo './'`test/testsamdecoder.cpp
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from test/testsimplethreadpoolbamdecode.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolDecodeBamParsePackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentPosComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolDecodeBamParseQueueInfo*, std::vector<BamThreadPoolDecodeBamParseQueueInfo, std::allocator<BamThreadPoolDecodeBamParseQueueInfo> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testdecimalnumberparser-testdecimalnumberparser.o `test -f 'test/testdecimalnumberparser.cpp' || echo './'`test/testdecimalnumberparser.cpp
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void BamThreadPoolDecodeBamParsePackageDispatcher<_order_type>::dispatch(libmaus2::parallel::SimpleThreadWorkPackage*, libmaus2::parallel::SimpleThreadPoolInterfaceEnqueTermInterface&) [with _order_type = libmaus2::bambam::BamAlignmentNameComparator]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<BamThreadPoolDecodeBamParseQueueInfo*, std::vector<BamThreadPoolDecodeBamParseQueueInfo, std::allocator<BamThreadPoolDecodeBamParseQueueInfo> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testunsignedinteger-testunsignedinteger.o `test -f 'test/testunsignedinteger.cpp' || echo './'`test/testunsignedinteger.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/math/DecimalNumberParser.hpp:22,
from test/testdecimalnumberparser.cpp:21:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::math::DecimalNumberParser::DecimalNumberParser()’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/math/DecimalNumberParser.hpp:22,
from test/testdecimalnumberparser.cpp:21:
/usr/include/c++/10/bits/stl_vector.h: In function ‘int main()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testmd5-testmd5.o `test -f 'test/testmd5.cpp' || echo './'`test/testmd5.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsha-testsha.o `test -f 'test/testsha.cpp' || echo './'`test/testsha.cpp
In file included from ./libmaus2/digest/md5.hpp:25,
from ./libmaus2/digest/Digests.hpp:22,
from ./libmaus2/digest/DigestFactoryInterface.hpp:22,
from ./libmaus2/digest/DigestFactory.hpp:22,
from test/testsha.cpp:19:
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘std::ostream& libmaus2::math::operator<<(std::ostream&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0; std::ostream = std::basic_ostream<char>]’:
test/testsha.cpp:43:71: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:688:33: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
688 | for ( unsigned int i = 0; i < k; ++i )
| ~~^~~
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘libmaus2::math::UnsignedInteger<k>::UnsignedInteger(const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0]’:
./libmaus2/digest/DigestBase.hpp:130:47: required from ‘libmaus2::math::UnsignedInteger<0> libmaus2::digest::DigestBase<0, _blockshift, _needpad, _numlen, _prefersinglecall>::digestui() [with unsigned int _blockshift = 0; bool _needpad = false; unsigned int _numlen = 0; bool _prefersinglecall = false]’
test/testsha.cpp:43:86: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:162:27: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
162 | for ( size_t i = 0; i < k; ++i )
| ~~^~~
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘libmaus2::math::UnsignedInteger<k>::UnsignedInteger(uint64_t) [with unsigned int k = 0; uint64_t = long long unsigned int]’:
./libmaus2/math/UnsignedInteger.hpp:698:24: required from ‘std::ostream& libmaus2::math::operator<<(std::ostream&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:43:71: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:172:28: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
172 | for ( size_t i = 2; i < k; ++i )
| ~~^~~
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘bool libmaus2::math::UnsignedInteger<k>::operator==(const libmaus2::math::UnsignedInteger<k>&) const [with unsigned int k = 0]’:
./libmaus2/math/UnsignedInteger.hpp:203:14: required from ‘bool libmaus2::math::UnsignedInteger<k>::operator!=(const libmaus2::math::UnsignedInteger<k>&) const [with unsigned int k = 0]’
./libmaus2/math/UnsignedInteger.hpp:701:15: required from ‘std::ostream& libmaus2::math::operator<<(std::ostream&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:43:71: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:196:27: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
196 | for ( size_t i = 0; i < k; ++i )
| ~~^~~
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘bool libmaus2::math::UnsignedInteger<k>::operator>(const libmaus2::math::UnsignedInteger<k>&) const [with unsigned int k = 0]’:
./libmaus2/math/UnsignedInteger.hpp:589:12: required from ‘std::pair<libmaus2::math::UnsignedInteger<k>, libmaus2::math::UnsignedInteger<k> > libmaus2::math::divmod(const libmaus2::math::UnsignedInteger<k>&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0]’
./libmaus2/math/UnsignedInteger.hpp:703:67: required from ‘std::ostream& libmaus2::math::operator<<(std::ostream&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:43:71: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:222:27: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
222 | for ( size_t i = 0; i < k; ++i )
| ~~^~~
./libmaus2/math/UnsignedInteger.hpp: In instantiation of ‘libmaus2::math::UnsignedInteger<k>::UnsignedInteger(const libmaus2::math::UnsignedInteger<l>&) [with unsigned int l = 1; unsigned int k = 0]’:
./libmaus2/math/UnsignedInteger.hpp:625:5: required from ‘std::pair<libmaus2::math::UnsignedInteger<k>, libmaus2::math::UnsignedInteger<k> > libmaus2::math::divmod(const libmaus2::math::UnsignedInteger<k>&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0]’
./libmaus2/math/UnsignedInteger.hpp:703:67: required from ‘std::ostream& libmaus2::math::operator<<(std::ostream&, const libmaus2::math::UnsignedInteger<k>&) [with unsigned int k = 0; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:43:71: required from ‘void printCRC(const uint8_t*, uint64_t, std::ostream&) [with crc = libmaus2::digest::Null; uint8_t = unsigned char; uint64_t = long long unsigned int; std::ostream = std::basic_ostream<char>]’
test/testsha.cpp:310:59: required from here
./libmaus2/math/UnsignedInteger.hpp:156:27: warning: comparison of unsigned expression in ‘< 0’ is always false [-Wtype-limits]
156 | for ( size_t i = l; i < k; ++i )
| ~~^~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testparallelbamvalidation-testparallelbamvalidation.o `test -f 'test/testparallelbamvalidation.cpp' || echo './'`test/testparallelbamvalidation.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testparallelbamrewrite-testparallelbamrewrite.o `test -f 'test/testparallelbamrewrite.cpp' || echo './'`test/testparallelbamrewrite.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfThreadQueueElementHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testbammateerase-testbammateerase.o `test -f 'test/testbammateerase.cpp' || echo './'`test/testbammateerase.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::lz::BgzfThreadQueueElement&}; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Alloc = std::allocator<libmaus2::lz::BgzfThreadQueueElement>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfDeflateParallel::drain()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::lz::BgzfDeflateParallel::flushInternal()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamWriterTemplate<_base_type>::writeBamBlock(const uint8_t*, uint64_t) [with _base_type = libmaus2::bambam::BamWriterParallelStreamBase]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >; _Distance = int; _Tp = libmaus2::lz::BgzfThreadQueueElement; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::lz::BgzfDeflateBlockIdComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::lz::BgzfDeflateParallelThreadCallable::run()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >; _Distance = int; _Tp = libmaus2::bambam::parallel::DecompressedPendingObject; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::parallel::DecompressedPendingObjectHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignmentEncoderBase.hpp:22,
from ./libmaus2/bambam/BamWriter.hpp:22,
from ./libmaus2/bambam/BamBlockWriterBaseFactory.hpp:22,
from test/testsamdecoder.cpp:21:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, bool>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, bool> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, bool> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::parallel::DecompressedPendingObject&}; _Tp = libmaus2::bambam::parallel::DecompressedPendingObject; _Alloc = std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> >::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::bambam::parallel::ValidationControl::putParsedBlockAddPending(libmaus2::bambam::parallel::AlignmentBuffer::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::bambam::parallel::ValidationControl::validateBlockFragmentFinished(libmaus2::bambam::parallel::ValidationFragment&, bool)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testsamdecoder.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::BamWriterTemplate<_base_type>::BamWriterTemplate(libmaus2::bambam::BamWriterTemplate<_base_type>::base_type&, const libmaus2::bambam::BamHeader&, const std::vector<libmaus2::lz::BgzfDeflateOutputCallback*>*) [with _base_type = libmaus2::bambam::BamWriterParallelStreamBase]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::lz::BgzfThreadQueueElement*, std::vector<libmaus2::lz::BgzfThreadQueueElement, std::allocator<libmaus2::lz::BgzfThreadQueueElement> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::ValidationControl::putDecompressedBlockAddPending(libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >; _Distance = int; _Tp = libmaus2::bambam::parallel::DecompressedPendingObject; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::parallel::DecompressedPendingObjectHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >; _Distance = int; _Tp = libmaus2::bambam::parallel::WritePendingObject; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::parallel::WritePendingObjectHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeaderLowMem.hpp:26,
from ./libmaus2/bambam/parallel/ParseInfo.hpp:22,
from test/testparallelbamvalidation.cpp:41:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/autoarray/GenericAlignedAllocation.hpp:23,
from ./libmaus2/autoarray/AutoArray.hpp:26,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamHeaderLowMem::setupFromText()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/BgzfInflateHeaderBase.hpp:25,
from ./libmaus2/bambam/parallel/InputBlock.hpp:22,
from ./libmaus2/bambam/parallel/ControlInputInfo.hpp:22,
from test/testparallelbamvalidation.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeaderLowMem.hpp:26,
from ./libmaus2/bambam/parallel/ParseInfo.hpp:22,
from test/testparallelbamvalidation.cpp:41:
./libmaus2/hashing/ConstantStringHash.hpp:71:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
71 | unique_ptr_type u(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject}; _Tp = libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject; _Alloc = std::allocator<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, bool>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, bool> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, bool> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::parallel::DecompressedPendingObject&}; _Tp = libmaus2::bambam::parallel::DecompressedPendingObject; _Alloc = std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> >::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/parallel/ParseInfo.hpp:22,
from test/testparallelbamvalidation.cpp:41:
./libmaus2/bambam/BamHeaderLowMem.hpp:804:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
804 | }
| ^
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::parallel::WritePendingObject}; _Tp = libmaus2::bambam::parallel::WritePendingObject; _Alloc = std::allocator<libmaus2::bambam::parallel::WritePendingObject>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::WritePendingObject>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from test/testbammateerase.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testparallelbamblocksort-testparallelbamblocksort.o `test -f 'test/testparallelbamblocksort.cpp' || echo './'`test/testparallelbamblocksort.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::addWritePendingBgzfBlock(int64_t, int64_t, libmaus2::lz::BgzfDeflateOutputBufferBase::shared_ptr_type, const libmaus2::lz::BgzfDeflateZStreamBaseFlushInfo&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::_ZThn72_N8libmaus26bambam8parallel14RewriteControl24addWritePendingBgzfBlockExxSt10shared_ptrINS_2lz27BgzfDeflateOutputBufferBaseEERKNS4_31BgzfDeflateZStreamBaseFlushInfoE(int64_t, int64_t, libmaus2::lz::BgzfDeflateOutputBufferBase::shared_ptr_type, const libmaus2::lz::BgzfDeflateZStreamBaseFlushInfo&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::WritePendingObject*, std::vector<libmaus2::bambam::parallel::WritePendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::RewriteControl::checkLargeBlockCompressionPending()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject*, std::vector<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::putParsedBlockAddPending(libmaus2::bambam::parallel::AlignmentBuffer::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::putDecompressedBlockAddPending(libmaus2::bambam::parallel::DecompressedBlock::shared_ptr_type)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::DecompressedPendingObject*, std::vector<libmaus2::bambam::parallel::DecompressedPendingObject, std::allocator<libmaus2::bambam::parallel::DecompressedPendingObject> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/serialize/Serialize.hpp:25,
from ./libmaus2/autoarray/AutoArray.hpp:27,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_map.h: In member function ‘void libmaus2::bambam::parallel::RewriteControl::checkValidatedRewritePending()’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> >, std::_Select1st<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::validateBlockFragmentFinished(libmaus2::bambam::parallel::ValidationFragment&, bool)’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, bool>, std::_Select1st<std::pair<const long long unsigned int, bool> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, bool> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testmapperm-testmapperm.o `test -f 'test/testmapperm.cpp' || echo './'`test/testmapperm.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testexternalmemoryindex-testexternalmemoryindex.o `test -f 'test/testexternalmemoryindex.cpp' || echo './'`test/testexternalmemoryindex.cpp
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘virtual void libmaus2::bambam::parallel::RewriteControl::bamHeaderComplete(const libmaus2::bambam::BamHeaderParserState&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject*, std::vector<libmaus2::bambam::parallel::SmallLinearBlockCompressionPendingObject> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/bambam/DecoderBase.hpp:23,
from ./libmaus2/bambam/CigarRunLengthDecoder.hpp:21,
from ./libmaus2/bambam/CigarDecoder.hpp:21,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:22,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamHeaderLowMem::setupFromText()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/bambam/BamAuxSortingBuffer.hpp:23,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:23,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/parallel/PushBackSpace.hpp:22,
from ./libmaus2/bambam/parallel/AlignmentBuffer.hpp:22,
from ./libmaus2/bambam/parallel/FragmentAlignmentBufferRewriteUpdateInterval.hpp:22,
from test/testparallelbamrewrite.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp:71:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy*, std::vector<libmaus2::bambam::BamHeaderLowMem::ReadGroupHashProxy> >’ changed in GCC 7.1
71 | unique_ptr_type u(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/parallel/ParseInfo.hpp:22,
from test/testparallelbamrewrite.cpp:55:
./libmaus2/bambam/BamHeaderLowMem.hpp:804:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
804 | }
| ^
In file included from test/testparallelbamblocksort.cpp:19:
./libmaus2/bambam/parallel/BlockMergeControl.hpp: In instantiation of ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::enqueHeader() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName]’:
./libmaus2/bambam/parallel/BlockMergeControl.hpp:582:6: required from ‘libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::BlockMergeControl(libmaus2::parallel::SimpleThreadPool&, std::ostream&, libmaus2::autoarray::AutoArray<char>&, const std::vector<libmaus2::bambam::parallel::GenericInputControlStreamInfo>&, libmaus2::bitio::BitVector*, int, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const string&, const string&, libmaus2::digest::DigestInterface*, libmaus2::bambam::parallel::BlockMergeControlTypeBase::block_merge_output_format_t, bool, bool, bool, uint64_t, const string&) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName; std::ostream = std::basic_ostream<char>; libmaus2::bitio::BitVector = libmaus2::bitio::BitVectorTemplate<long long unsigned int>; uint64_t = long long unsigned int; std::string = std::__cxx11::basic_string<char>]’
test/testparallelbamblocksort.cpp:217:68: required from ‘int parallelbamblocksort(const libmaus2::util::ArgInfo&, bool, bool, const string&, bool) [with order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferQueryNameComparator; heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName; bool create_dup_mark_info = false; std::string = std::__cxx11::basic_string<char>]’
test/testparallelbamblocksort.cpp:260:4: required from here
./libmaus2/bambam/parallel/BlockMergeControl.hpp:348:92: error: cannot convert ‘<unresolved overloaded function type>’ to ‘cram_data_write_function_t’ {aka ‘void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type)’}
348 | samsupport.context = sam_allocate_encoder(this,ptext.first,ptext.second-ptext.first,sam_data_write_function);
| ^~~~~~~~~~~~~~~~~~~~~~~
| |
| <unresolved overloaded function type>
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1275:33: note: initializing argument 4 of ‘static void* libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::sam_allocate_encoder(void*, const char*, size_t, cram_data_write_function_t) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName; size_t = unsigned int; cram_data_write_function_t = void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type); ssize_t = int; cram_data_write_block_type = _cram_data_write_block_type]’
1275 | cram_data_write_function_t write_func
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
./libmaus2/bambam/parallel/BlockMergeControl.hpp:366:94: error: cannot convert ‘<unresolved overloaded function type>’ to ‘cram_data_write_function_t’ {aka ‘void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type)’}
366 | cramsupport.context = cram_allocate_encoder(this,ptext.first,ptext.second-ptext.first,sam_data_write_function);
| ^~~~~~~~~~~~~~~~~~~~~~~
| |
| <unresolved overloaded function type>
./libmaus2/bambam/parallel/BlockMergeControl.hpp:432:124: note: initializing argument 4 of ‘void* libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::cram_allocate_encoder(void*, const char*, size_t, cram_data_write_function_t) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName; size_t = unsigned int; cram_data_write_function_t = void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type); ssize_t = int; cram_data_write_block_type = _cram_data_write_block_type]’
432 | void * cram_allocate_encoder(void *userdata, char const *header, size_t const headerlength, cram_data_write_function_t writefunc)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
./libmaus2/bambam/parallel/BlockMergeControl.hpp: In instantiation of ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::enqueHeader() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate]’:
./libmaus2/bambam/parallel/BlockMergeControl.hpp:582:6: required from ‘libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::BlockMergeControl(libmaus2::parallel::SimpleThreadPool&, std::ostream&, libmaus2::autoarray::AutoArray<char>&, const std::vector<libmaus2::bambam::parallel::GenericInputControlStreamInfo>&, libmaus2::bitio::BitVector*, int, uint64_t, uint64_t, uint64_t, uint64_t, uint64_t, const string&, const string&, libmaus2::digest::DigestInterface*, libmaus2::bambam::parallel::BlockMergeControlTypeBase::block_merge_output_format_t, bool, bool, bool, uint64_t, const string&) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate; std::ostream = std::basic_ostream<char>; libmaus2::bitio::BitVector = libmaus2::bitio::BitVectorTemplate<long long unsigned int>; uint64_t = long long unsigned int; std::string = std::__cxx11::basic_string<char>]’
test/testparallelbamblocksort.cpp:217:68: required from ‘int parallelbamblocksort(const libmaus2::util::ArgInfo&, bool, bool, const string&, bool) [with order_type = libmaus2::bambam::parallel::FragmentAlignmentBufferPosComparator; heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate; bool create_dup_mark_info = true; std::string = std::__cxx11::basic_string<char>]’
test/testparallelbamblocksort.cpp:270:4: required from here
./libmaus2/bambam/parallel/BlockMergeControl.hpp:348:92: error: cannot convert ‘<unresolved overloaded function type>’ to ‘cram_data_write_function_t’ {aka ‘void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type)’}
348 | samsupport.context = sam_allocate_encoder(this,ptext.first,ptext.second-ptext.first,sam_data_write_function);
| ^~~~~~~~~~~~~~~~~~~~~~~
| |
| <unresolved overloaded function type>
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1275:33: note: initializing argument 4 of ‘static void* libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::sam_allocate_encoder(void*, const char*, size_t, cram_data_write_function_t) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate; size_t = unsigned int; cram_data_write_function_t = void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type); ssize_t = int; cram_data_write_block_type = _cram_data_write_block_type]’
1275 | cram_data_write_function_t write_func
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
./libmaus2/bambam/parallel/BlockMergeControl.hpp:366:94: error: cannot convert ‘<unresolved overloaded function type>’ to ‘cram_data_write_function_t’ {aka ‘void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type)’}
366 | cramsupport.context = cram_allocate_encoder(this,ptext.first,ptext.second-ptext.first,sam_data_write_function);
| ^~~~~~~~~~~~~~~~~~~~~~~
| |
| <unresolved overloaded function type>
./libmaus2/bambam/parallel/BlockMergeControl.hpp:432:124: note: initializing argument 4 of ‘void* libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::cram_allocate_encoder(void*, const char*, size_t, cram_data_write_function_t) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate; size_t = unsigned int; cram_data_write_function_t = void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type); ssize_t = int; cram_data_write_block_type = _cram_data_write_block_type]’
432 | void * cram_allocate_encoder(void *userdata, char const *header, size_t const headerlength, cram_data_write_function_t writefunc)
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/index/ExternalMemoryIndexDecoder.hpp:23,
from test/testexternalmemoryindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testmapperm.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/index/ExternalMemoryIndexDecoder.hpp:23,
from test/testexternalmemoryindex.cpp:20:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘uint64_t libmaus2::index::ExternalMemoryIndexGenerator<_data_type, _base_level_log, _inner_level_log>::flush() [with _data_type = SerialisableUint64; unsigned int _base_level_log = 10; unsigned int _inner_level_log = 2]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
./libmaus2/bambam/parallel/BlockMergeControl.hpp: In instantiation of ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::checkRewriteReorderQueue() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate]’:
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1608:7: required from ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::genericInputControlReorderWorkPackageFinished(libmaus2::bambam::parallel::AlignmentBuffer::shared_ptr_type, libmaus2::bambam::parallel::FragmentAlignmentBuffer::shared_ptr_type) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate; libmaus2::bambam::parallel::AlignmentBuffer::shared_ptr_type = std::shared_ptr<libmaus2::bambam::parallel::AlignmentBuffer>; libmaus2::bambam::parallel::FragmentAlignmentBuffer::shared_ptr_type = std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer>]’
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1584:10: required from here
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1404:10: error: cannot convert ‘<unresolved overloaded function type>’ to ‘cram_data_write_function_t’ {aka ‘void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type)’}
1404 | sam_data_write_function,
| ^~~~~~~~~~~~~~~~~~~~~~~
| |
| <unresolved overloaded function type>
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1337:33: note: initializing argument 10 of ‘static int libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::sam_enque_compression_block(void*, void*, size_t, const char**, const size_t*, const size_t*, size_t, int, cram_enque_compression_work_package_function_t, cram_data_write_function_t, cram_compression_work_package_finished_t) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate; size_t = unsigned int; cram_enque_compression_work_package_function_t = void (*)(void*, void*); cram_data_write_function_t = void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type); ssize_t = int; cram_data_write_block_type = _cram_data_write_block_type; cram_compression_work_package_finished_t = void (*)(void*, unsigned int, int)]’
1337 | cram_data_write_function_t writefunction,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1458:10: error: cannot convert ‘<unresolved overloaded function type>’ to ‘cram_data_write_function_t’ {aka ‘void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type)’}
1458 | sam_data_write_function,
| ^~~~~~~~~~~~~~~~~~~~~~~
| |
| <unresolved overloaded function type>
./libmaus2/bambam/parallel/BlockMergeControl.hpp:457:33: note: initializing argument 10 of ‘int libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::cram_enque_compression_block(void*, void*, size_t, const char**, const size_t*, const size_t*, size_t, int, cram_enque_compression_work_package_function_t, cram_data_write_function_t, cram_compression_work_package_finished_t) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryCoordinate; size_t = unsigned int; cram_enque_compression_work_package_function_t = void (*)(void*, void*); cram_data_write_function_t = void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type); ssize_t = int; cram_data_write_block_type = _cram_data_write_block_type; cram_compression_work_package_finished_t = void (*)(void*, unsigned int, int)]’
457 | cram_data_write_function_t writefunction,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
./libmaus2/bambam/parallel/BlockMergeControl.hpp: In instantiation of ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::checkRewriteReorderQueue() [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName]’:
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1608:7: required from ‘void libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::genericInputControlReorderWorkPackageFinished(libmaus2::bambam::parallel::AlignmentBuffer::shared_ptr_type, libmaus2::bambam::parallel::FragmentAlignmentBuffer::shared_ptr_type) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName; libmaus2::bambam::parallel::AlignmentBuffer::shared_ptr_type = std::shared_ptr<libmaus2::bambam::parallel::AlignmentBuffer>; libmaus2::bambam::parallel::FragmentAlignmentBuffer::shared_ptr_type = std::shared_ptr<libmaus2::bambam::parallel::FragmentAlignmentBuffer>]’
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1584:10: required from here
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1404:10: error: cannot convert ‘<unresolved overloaded function type>’ to ‘cram_data_write_function_t’ {aka ‘void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type)’}
1404 | sam_data_write_function,
| ^~~~~~~~~~~~~~~~~~~~~~~
| |
| <unresolved overloaded function type>
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1337:33: note: initializing argument 10 of ‘static int libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::sam_enque_compression_block(void*, void*, size_t, const char**, const size_t*, const size_t*, size_t, int, cram_enque_compression_work_package_function_t, cram_data_write_function_t, cram_compression_work_package_finished_t) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName; size_t = unsigned int; cram_enque_compression_work_package_function_t = void (*)(void*, void*); cram_data_write_function_t = void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type); ssize_t = int; cram_data_write_block_type = _cram_data_write_block_type; cram_compression_work_package_finished_t = void (*)(void*, unsigned int, int)]’
1337 | cram_data_write_function_t writefunction,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
./libmaus2/bambam/parallel/BlockMergeControl.hpp:1458:10: error: cannot convert ‘<unresolved overloaded function type>’ to ‘cram_data_write_function_t’ {aka ‘void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type)’}
1458 | sam_data_write_function,
| ^~~~~~~~~~~~~~~~~~~~~~~
| |
| <unresolved overloaded function type>
./libmaus2/bambam/parallel/BlockMergeControl.hpp:457:33: note: initializing argument 10 of ‘int libmaus2::bambam::parallel::BlockMergeControl<_heap_element_type>::cram_enque_compression_block(void*, void*, size_t, const char**, const size_t*, const size_t*, size_t, int, cram_enque_compression_work_package_function_t, cram_data_write_function_t, cram_compression_work_package_finished_t) [with _heap_element_type = libmaus2::bambam::parallel::GenericInputControlMergeHeapEntryQueryName; size_t = unsigned int; cram_enque_compression_work_package_function_t = void (*)(void*, void*); cram_data_write_function_t = void (*)(void*, int, unsigned int, const char*, unsigned int, _cram_data_write_block_type); ssize_t = int; cram_data_write_block_type = _cram_data_write_block_type; cram_compression_work_package_finished_t = void (*)(void*, unsigned int, int)]’
457 | cram_data_write_function_t writefunction,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from ./libmaus2/aio/PosixFdInputStreamFactory.hpp:23,
from ./libmaus2/aio/InputStreamFactoryContainer.hpp:23,
from ./libmaus2/index/ExternalMemoryIndexDecoder.hpp:23,
from test/testexternalmemoryindex.cpp:20:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::index::ExternalMemoryIndexDecoder<_data_type, _base_level_log, _inner_level_log, _comparator>::setup(uint64_t) [with _data_type = SerialisableUint64; unsigned int _base_level_log = 10; unsigned int _inner_level_log = 2; _comparator = std::less<SerialisableUint64>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testfastqtobam-testfastqtobam.o `test -f 'test/testfastqtobam.cpp' || echo './'`test/testfastqtobam.cpp
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testmapperm.cpp:20:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -W -Wall -Wnon-virtual-dtor -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/libmaus2-2.0.722+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -std=gnu++0x -pthread -fopenmp -c -o test/testsamrecoding-testsamrecoding.o `test -f 'test/testsamrecoding.cpp' || echo './'`test/testsamrecoding.cpp
make[3]: *** [Makefile:10494: test/testparallelbamblocksort-testparallelbamblocksort.o] Error 1
make[3]: *** Waiting for unfinished jobs....
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testfastqtobam.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending*, std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending> >; _Distance = int; _Tp = libmaus2::bambam::parallel::FastqToBamControlSubReadPending; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::parallel::FastqToBamControlSubReadPendingHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending*, std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testfastqtobam.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::parallel::GenericInputControlCompressionPending&}; _Tp = libmaus2::bambam::parallel::GenericInputControlCompressionPending; _Alloc = std::allocator<libmaus2::bambam::parallel::GenericInputControlCompressionPending>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::parallel::FastqToBamControlSubReadPending&}; _Tp = libmaus2::bambam::parallel::FastqToBamControlSubReadPending; _Alloc = std::allocator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/lz/StreamWrapperBuffer.hpp:23,
from ./libmaus2/lz/StreamWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInput.hpp:26,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testfastqtobam.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending*, std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending> >; _Distance = int; _Tp = libmaus2::bambam::parallel::FastqToBamControlSubReadPending; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::parallel::FastqToBamControlSubReadPendingHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending*, std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/StackTrace.hpp:32,
from ./libmaus2/exception/LibMausException.hpp:25,
from ./libmaus2/parallel/StdSpinLock.hpp:23,
from ./libmaus2/aio/StreamLock.hpp:21,
from ./libmaus2/aio/PosixFdInput.hpp:23,
from ./libmaus2/aio/PosixFdInputWrapper.hpp:22,
from ./libmaus2/aio/PosixFdInputStream.hpp:22,
from test/testfastqtobam.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::FastqToBamControl::checkSubReadPendingQueue()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::FastqToBamControlSubReadPending*, std::vector<libmaus2::bambam::parallel::FastqToBamControlSubReadPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::FastqToBamControl::checkCompressionPendingQueue()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::parallel::FastqToBamControl::checkWritePendingQueue()’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘virtual void libmaus2::bambam::parallel::FastqToBamControl::genericInputControlBlockCompressionFinished(libmaus2::bambam::parallel::GenericInputControlCompressionPending)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::parallel::GenericInputControlCompressionPending*, std::vector<libmaus2::bambam::parallel::GenericInputControlCompressionPending> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::ReadGroup&}; _Tp = libmaus2::bambam::ReadGroup; _Alloc = std::allocator<libmaus2::bambam::ReadGroup>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::ReadGroup>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<long long unsigned int, long long unsigned int>&}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const libmaus2::bambam::Chromosome&}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<long long unsigned int, long long unsigned int>}; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Alloc = std::allocator<std::pair<long long unsigned int, long long unsigned int> >]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<std::pair<long long unsigned int, long long unsigned int> >::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘std::pair<_FIter, _FIter> std::__equal_range(_ForwardIterator, _ForwardIterator, const _Tp&, _CompareItTp, _CompareTpIt) [with _ForwardIterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >; _Tp = libmaus2::bambam::Chromosome; _CompareItTp = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>; _CompareTpIt = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ChromosomeVectorMerge::ChromosomeIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2136 | __equal_range(_ForwardIterator __first, _ForwardIterator __last,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:2136:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::Chromosome}; _Tp = libmaus2::bambam::Chromosome; _Alloc = std::allocator<libmaus2::bambam::Chromosome>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::Chromosome>::iterator’ changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {libmaus2::bambam::BamAlignmentDecoderInfo}; _Tp = libmaus2::bambam::BamAlignmentDecoderInfo; _Alloc = std::allocator<libmaus2::bambam::BamAlignmentDecoderInfo>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<libmaus2::bambam::BamAlignmentDecoderInfo>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<long long int>::iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_tree.h: In member function ‘std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2193 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::set<long long unsigned int> >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = std::set<long long unsigned int>; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > >]’:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In constructor ‘libmaus2::bambam::ChromosomeVectorMerge::ChromosomeVectorMerge(const std::vector<const std::vector<libmaus2::bambam::Chromosome>*>&, bool)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::set<long long unsigned int> >, std::_Select1st<std::pair<const long long unsigned int, std::set<long long unsigned int> > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::set<long long unsigned int> > > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:2242:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
2242 | return std::__equal_range(__first, __last, __val,
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
2243 | __gnu_cxx::__ops::__iter_comp_val(__comp),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2244 | __gnu_cxx::__ops::__val_comp_iter(__comp));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamCatHeader.hpp:26,
from ./libmaus2/bambam/BamMergeCoordinate.hpp:22,
from ./libmaus2/bambam/BamMultiAlignmentDecoderFactory.hpp:23,
from test/testsamrecoding.cpp:20:
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
279 | }
| ^
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
./libmaus2/bambam/ChromosomeVectorMerge.hpp:279:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In static member function ‘static std::vector<libmaus2::bambam::ReadGroup> libmaus2::bambam::BamHeader::getReadGroups(const string&)’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__move_median_to_first(_Iterator, _Iterator, _Iterator, _Iterator, _Compare) [with _Iterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
79 | __move_median_to_first(_Iterator __result,_Iterator __a, _Iterator __b,
| ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:79:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1819 | __unguarded_linear_insert(_RandomAccessIterator __last,
| ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLineSet::ProgramHeaderLineSet(const string&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1662 | __heap_select(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1937 | std::__heap_select(__first, __middle, __last, __comp);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_val<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:134:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
134 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::BamMergeCoordinateHeapComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Distance = int; _Tp = std::pair<long long unsigned int, long long unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<libmaus2::bambam::ReadGroupVectorMerge::ReadGroupIndexComparator>]’:
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1924 | std::__move_median_to_first(__first, __first + 1, __mid, __last - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1925 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1924:34: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In constructor ‘libmaus2::bambam::ReadGroupVectorMerge::ReadGroupVectorMerge(const std::vector<const std::vector<libmaus2::bambam::ReadGroup>*>&)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘typename libmaus2::trie::LinearHashTrie<_char_type, id_type>::unique_ptr_type libmaus2::trie::Trie<_char_type>::toLinearHashTrie() const [with id_type = unsigned int; _char_type = char]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:31,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamAlignmentDecoderFactory.hpp:23,
from ./libmaus2/bambam/BamMultiAlignmentDecoderFactory.hpp:22,
from test/testsamrecoding.cpp:20:
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
767 | }
| ^
./libmaus2/trie/TrieState.hpp:767:4: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
from ./libmaus2/util/ArgInfo.hpp:23,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_map.h: In constructor ‘libmaus2::bambam::ProgramHeaderLinesMerge::ProgramHeaderLinesMerge(const std::vector<const std::__cxx11::basic_string<char>*>&)’:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
520 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
521 | std::forward_as_tuple(std::move(__k)),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
522 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, long long unsigned int>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, long long unsigned int> > >::const_iterator’ changed in GCC 7.1
501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
502 | std::tuple<const key_type&>(__k),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
503 | std::tuple<>());
| ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘void libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::init() [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function ‘bool libmaus2::bambam::BamMergeTemplate<_heap_comparator_type, _sort_check_type>::readAlignmentInternal(bool) [with _heap_comparator_type = libmaus2::bambam::BamMergeCoordinateHeapComparator; _sort_check_type = libmaus2::bambam::BamCatHeader::IsCoordinateSorted]’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from ./libmaus2/bambam/BamHeader.hpp:36,
from ./libmaus2/bambam/BamAlignmentDecoderBase.hpp:30,
from ./libmaus2/bambam/BamAlignment.hpp:24,
from ./libmaus2/bambam/BamAlignmentDecoder.hpp:22,
from ./libmaus2/bambam/BamDecoder.hpp:22,
from ./libmaus2/bambam/BamAlignmentDecoderFactory.hpp:23,
from ./libmaus2/bambam/BamMultiAlignmentDecoderFactory.hpp:22,
from test/testsamrecoding.cpp:20:
./libmaus2/hashing/ConstantStringHash.hpp: In constructor ‘libmaus2::hashing::ConstantStringHash::ConstantStringHash(iterator, iterator, uint64_t) [with iterator = __gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >]’:
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
96 | ConstantStringHash(iterator ita, iterator ite, uint64_t const maxn = 64*1024)
| ^~~~~~~~~~~~~~~~~~
./libmaus2/hashing/ConstantStringHash.hpp:96:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
./libmaus2/hashing/ConstantStringHash.hpp: In member function ‘void libmaus2::bambam::BamHeader::initSetup()’:
./libmaus2/hashing/ConstantStringHash.hpp:86:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::ReadGroup*, std::vector<libmaus2::bambam::ReadGroup> >’ changed in GCC 7.1
86 | shared_ptr_type s(new this_type(ita,ite,maxn));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateStream]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = std::__cxx11::basic_istringstream<char>]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function ‘void libmaus2::bambam::BamHeader::init(stream_type&) [with stream_type = libmaus2::lz::BgzfInflateThreadPoolReader]’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::Chromosome*, std::vector<libmaus2::bambam::Chromosome> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_vector.h: In member function ‘std::vector<std::pair<long long unsigned int, long long unsigned int> > libmaus2::bambam::BamIndex::reg2chunks(uint64_t, uint64_t, uint64_t) const’:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from ./libmaus2/autoarray/AutoArray.hpp:24,
from ./libmaus2/util/StringSerialisation.hpp:30,
from ./libmaus2/util/ArgInfo.hpp:32,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, long long unsigned int>*, std::vector<std::pair<long long unsigned int, long long unsigned int> > >’ changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from ./libmaus2/util/ArgInfo.hpp:24,
from test/testsamrecoding.cpp:19:
/usr/include/c++/10/bits/vector.tcc: In function ‘int main(int, char**)’:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<libmaus2::bambam::BamAlignmentDecoderInfo*, std::vector<libmaus2::bambam::BamAlignmentDecoderInfo> >’ changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[3]: Leaving directory '/<<BUILDDIR>>/libmaus2-2.0.722+dfsg/src'
make[2]: *** [Makefile:692: all-recursive] Error 1
make[2]: Leaving directory '/<<BUILDDIR>>/libmaus2-2.0.722+dfsg'
make[1]: *** [Makefile:574: all] Error 2
make[1]: Leaving directory '/<<BUILDDIR>>/libmaus2-2.0.722+dfsg'
dh_auto_build: error: make -j4 returned exit code 2
make: *** [debian/rules:12: binary-arch] Error 25
dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2020-08-15T09:11:11Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 679256
Build-Time: 1748
Distribution: bullseye-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 116
Job: libmaus2_2.0.722+dfsg-1
Machine Architecture: armhf
Package: libmaus2
Package-Time: 1883
Source-Version: 2.0.722+dfsg-1
Space: 679256
Status: attempted
Version: 2.0.722+dfsg-1
--------------------------------------------------------------------------------
Finished at 2020-08-15T09:11:11Z
Build needed 00:31:23, 679256k disk space