libbpp-popgen →
2.4.1-1 →
armhf → 2018-08-28 16:41:10
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02
+==============================================================================+
| libbpp-popgen 2.4.1-1 (armhf) Tue, 28 Aug 2018 16:36:07 +0000 |
+==============================================================================+
Package: libbpp-popgen
Version: 2.4.1-1
Source Version: 2.4.1-1
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-1b6d4cce-cbee-45fa-bc7b-401c311ad70c' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.0 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.7 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'libbpp-popgen' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/libbpp-popgen.git
Please use:
git clone https://salsa.debian.org/med-team/libbpp-popgen.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 138 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main libbpp-popgen 2.4.1-1 (dsc) [2201 B]
Get:2 http://172.17.0.1/private buster-staging/main libbpp-popgen 2.4.1-1 (tar) [117 kB]
Get:3 http://172.17.0.1/private buster-staging/main libbpp-popgen 2.4.1-1 (diff) [18.6 kB]
Fetched 138 kB in 0s (848 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/libbpp-popgen-BCqohK/libbpp-popgen-2.4.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/libbpp-popgen-BCqohK' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-nCq0zK/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-nCq0zK/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-nCq0zK/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-nCq0zK/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-nCq0zK/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-nCq0zK/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-nCq0zK/apt_archive ./ Sources [349 B]
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W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 36 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-nCq0zK/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
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(Reading database ... 15689 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 11~), cmake, d-shlibs (>= 0.80), libbpp-core-dev (>= 2.4.1), libbpp-seq-dev (>= 2.4.1)
Filtered Build-Depends: debhelper (>= 11~), cmake, d-shlibs (>= 0.80), libbpp-core-dev (>= 2.4.1), libbpp-seq-dev (>= 2.4.1)
dpkg-deb: building package 'sbuild-build-depends-libbpp-popgen-dummy' in '/<<BUILDDIR>>/resolver-nCq0zK/apt_archive/sbuild-build-depends-libbpp-popgen-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-libbpp-popgen-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-nCq0zK/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-nCq0zK/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-nCq0zK/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-nCq0zK/apt_archive ./ Sources [528 B]
Get:5 copy:/<<BUILDDIR>>/resolver-nCq0zK/apt_archive ./ Packages [614 B]
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W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install libbpp-popgen build dependencies (apt-based resolver)
-------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libnss-systemd
libpam-systemd libsasl2-modules openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13
libbpp-core-dev libbpp-core4 libbpp-seq-dev libbpp-seq12 libbsd0 libcroco3
libcurl4 libelf1 libfile-stripnondeterminism-perl libfreetype6 libglib2.0-0
libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libicu-le-hb0 libicu60
libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblzo2-2
libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 librhash0 librtmp1
libsigsegv2 libssh2-1 libtimedate-perl libtool libuv1 libxml2 m4 man-db
po-debconf
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation cmake-doc ninja-build dh-make gettext-doc libasprintf-dev
libgettextpo-dev groff lrzip krb5-doc krb5-user libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs krb5-locales publicsuffix libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13
libbpp-core-dev libbpp-core4 libbpp-seq-dev libbpp-seq12 libbsd0 libcroco3
libcurl4 libelf1 libfile-stripnondeterminism-perl libfreetype6 libglib2.0-0
libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libicu-le-hb0 libicu60
libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblzo2-2
libmagic-mgc libmagic1 libnghttp2-14 libpipeline1 libpsl5 librhash0 librtmp1
libsigsegv2 libssh2-1 libtimedate-perl libtool libuv1 libxml2 m4 man-db
po-debconf sbuild-build-depends-libbpp-popgen-dummy
0 upgraded, 58 newly installed, 0 to remove and 36 not upgraded.
Need to get 27.9 MB/29.1 MB of archives.
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Get:1 copy:/<<BUILDDIR>>/resolver-nCq0zK/apt_archive ./ sbuild-build-depends-libbpp-popgen-dummy 0.invalid.0 [900 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
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Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.4-2 [1161 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.34-2 [239 kB]
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Get:11 http://172.17.0.1/private buster-staging/main armhf libkeyutils1 armhf 1.5.9-9.3 [12.2 kB]
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Get:16 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-1 [771 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-7 [434 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf cmake-data all 3.12.1-1 [1436 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf liblzo2-2 armhf 2.10-0.1 [48.4 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.56.1-2 [2754 kB]
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Get:23 http://172.17.0.1/private buster-staging/main armhf libicu60 armhf 60.2-6 [7789 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7 [602 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libarchive13 armhf 3.2.2-5 [266 kB]
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Get:27 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.20.2-1 [52.5 kB]
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Get:33 http://172.17.0.1/private buster-staging/main armhf cmake armhf 3.12.1-1 [2550 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf d-shlibs all 0.82+nmu1 [19.2 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2.1 [547 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.63-1 [96.7 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.042-1 [20.1 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.042-1 [12.1 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.170-0.5 [160 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-2 [67.4 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-7 [1218 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.3.5 [981 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libbpp-core4 armhf 2.4.1-1 [486 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libbpp-core-dev armhf 2.4.1-1 [892 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libbpp-seq12 armhf 2.4.1-1 [414 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libbpp-seq-dev armhf 2.4.1-1 [691 kB]
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Setting up librhash0:armhf (1.3.6-2) ...
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Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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Processing triggers for libc-bin (2.27-5+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.4.0-124-generic armhf (armv8l)
Toolchain package versions: binutils_2.31.1-2+rpi1 dpkg-dev_1.19.0.5 g++-8_8.1.0-12+rpi1 gcc-8_8.1.0-12+rpi1 libc6-dev_2.27-5+rpi1 libstdc++-8-dev_8.1.0-12+rpi1 libstdc++6_8.1.0-12+rpi1 linux-libc-dev_4.16.16-2+rpi1
Package versions: adduser_3.117 apt_1.6.3 autoconf_2.69-11 automake_1:1.16.1-1 autopoint_0.19.8.1-7 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-2+rpi1 binutils-arm-linux-gnueabihf_2.31.1-2+rpi1 binutils-common_2.31.1-2+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.32.1-0.1 build-essential_12.5 bzip2_1.0.6-8.1 ca-certificates_20170717 cmake_3.12.1-1 cmake-data_3.12.1-1 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:8.1.0-1+rpi1 cpp-8_8.1.0-12+rpi1 d-shlibs_0.82+nmu1 dash_0.5.8-2.10 dbus_1.12.10-1 dbus-user-session_1.12.10-1 debconf_1.5.69 debhelper_11.3.5 debianutils_4.8.6 dh-autoreconf_19 dh-strip-nondeterminism_0.042-1 diffutils_1:3.6-1 dirmngr_2.2.9-1+rpi1 dmsetup_2:1.02.145-4.1+b4 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 dwz_0.12-2 e2fslibs_1.44.3-1 e2fsprogs_1.44.3-1 e2fsprogs-l10n_1.44.3-1 fakeroot_1.23-1 fdisk_2.32.1-0.1 file_1:5.34-2 findutils_4.6.0+git+20171230-2 g++_4:8.1.0-1+rpi1 g++-8_8.1.0-12+rpi1 gcc_4:8.1.0-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-8_8.1.0-12+rpi1 gcc-8-base_8.1.0-12+rpi1 gettext_0.19.8.1-7 gettext-base_0.19.8.1-7 gnupg_2.2.9-1+rpi1 gnupg-agent_2.2.9-1+rpi1 gnupg-l10n_2.2.9-1+rpi1 gnupg-utils_2.2.9-1+rpi1 gpg_2.2.9-1+rpi1 gpg-agent_2.2.9-1+rpi1 gpg-wks-client_2.2.9-1+rpi1 gpg-wks-server_2.2.9-1+rpi1 gpgconf_2.2.9-1+rpi1 gpgsm_2.2.9-1+rpi1 gpgv_2.2.9-1+rpi1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.9-2 hostname_3.20 inetutils-ping_2:1.9.4-3 init-system-helpers_1.51 initramfs-tools_0.132 initramfs-tools-core_0.132 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-14+rpi1 kmod_25-1 libacl1_2.2.52-3 libapparmor1_2.13-8 libapt-pkg5.0_1.6.3 libarchive-zip-perl_1.63-1 libarchive13_3.2.2-5 libargon2-1_0~20171227-0.1 libasan5_8.1.0-12+rpi1 libassuan0_2.5.1-2 libatomic1_8.1.0-12+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.3-1 libaudit1_1:2.8.3-1 libbinutils_2.31.1-2+rpi1 libblkid1_2.32.1-0.1 libbpp-core-dev_2.4.1-1 libbpp-core4_2.4.1-1 libbpp-seq-dev_2.4.1-1 libbpp-seq12_2.4.1-1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-5+rpi1 libc-dev-bin_2.27-5+rpi1 libc6_2.27-5+rpi1 libc6-dev_2.27-5+rpi1 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.1.0-12+rpi1 libcom-err2_1.44.3-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.4-2 libcryptsetup4_2:1.7.5-1 libcurl4_7.61.0-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.10-1 libdebconfclient0_0.244 libdevmapper1.02.1_2:1.02.145-4.1+b4 libdpkg-perl_1.19.0.5 libdrm-common_2.4.92-1+rpi1 libdrm2_2.4.92-1+rpi1 libelf1_0.170-0.5 libexpat1_2.2.5-3 libext2fs2_1.44.3-1 libfakeroot_1.23-1 libfdisk1_2.32.1-0.1 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.042-1 libfreetype6_2.8.1-2 libgcc-8-dev_8.1.0-12+rpi1 libgcc1_1:8.1.0-12+rpi1 libgcrypt20_1.8.3-1 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libglib2.0-0_2.56.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.19-1 libgomp1_8.1.0-12+rpi1 libgpg-error0_1.32-1 libgraphite2-3_1.3.11-2 libgssapi-krb5-2_1.16-2 libharfbuzz0b_1.8.8-2+rpi1 libhogweed4_3.4-1 libicu-le-hb0_1.0.3+git161113-5 libicu60_60.2-6 libidn11_1.33-2.2 libidn2-0_2.0.4-2.2 libip4tc0_1.6.2-1.1 libisl19_0.20-1 libjson-c3_0.12.1-1.3 libjsoncpp1_1.7.4-3 libk5crypto3_1.16-2 libkeyutils1_1.5.9-9.3 libklibc_2.0.4-14+rpi1 libkmod2_25-1 libkrb5-3_1.16-2 libkrb5support0_1.16-2 libksba8_1.3.5-2 libldap-2.4-2_2.4.46+dfsg-5+rpi1 libldap-common_2.4.46+dfsg-5+rpi1 liblz4-1_1.8.2-1+rpi1 liblzma5_5.2.2-1.3 liblzo2-2_2.10-0.1 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmount1_2.32.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1+20180714-1 libncurses6_6.1+20180714-1 libncursesw5_6.1+20180714-1 libncursesw6_6.1+20180714-1 libnettle6_3.4-1 libnghttp2-14_1.32.0-1 libnpth0_1.6-1 libnss-systemd_239-7 libp11-kit0_0.23.12-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_239-7 libpam0g_1.1.8-3.7 libpcre3_2:8.39-10 libperl5.24_5.24.1-7 libperl5.26_5.26.2-7 libpipeline1_1.5.0-1 libplymouth4_0.9.3-3 libpng16-16_1.6.34-2+rpi1 libprocps7_2:3.3.15-2 libpsl5_0.20.2-1 libreadline7_7.0-5 librhash0_1.3.6-2 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1 libseccomp2_2.3.3-3 libselinux1_2.8-1 libsemanage-common_2.8-1 libsemanage1_2.8-1 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.32.1-0.1 libsqlite3-0_3.24.0-1 libss2_1.44.3-1 libssh2-1_1.8.0-2 libssl1.1_1.1.0h-4 libstdc++-8-dev_8.1.0-12+rpi1 libstdc++6_8.1.0-12+rpi1 libsystemd0_239-7 libtasn1-6_4.13-3 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180714-1 libtinfo6_6.1+20180714-1 libtool_2.4.6-2.1 libubsan1_8.1.0-12+rpi1 libudev1_239-7 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.32.1-0.1 libuv1_1.22.0-3 libxml2_2.9.4+dfsg1-7 libzstd1_1.3.4+dfsg-3+rpi1 linux-base_4.5 linux-libc-dev_4.16.16-2+rpi1 login_1:4.5-1.1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.2.1-1.2 makedev_2.3.1-93 man-db_2.8.4-2 mawk_1.3.3-17 mount_2.32.1-0.1 multiarch-support_2.27-5+rpi1 nano_2.9.8-1 ncurses-base_6.1+20180714-1 ncurses-bin_6.1+20180714-1 netbase_5.4 openssl_1.1.0h-4 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.26.2-7 perl-base_5.26.2-7 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.2-7 pinentry-curses_1.1.0-1 plymouth_0.9.3-3 po-debconf_1.0.20 procps_2:3.3.15-2 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libbpp-popgen-dummy_0.invalid.0 sed_4.5-1 sensible-utils_0.0.12 systemd_239-7 systemd-sysv_239-7 sysvinit-utils_2.88dsf-59.10 tar_1.30+dfsg-2 tzdata_2018e-1 udev_239-7 util-linux_2.32.1-0.1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Wed Aug 22 20:31:55 2018 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tillea@rki.de"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./libbpp-popgen_2.4.1-1.dsc
dpkg-source: info: extracting libbpp-popgen in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking libbpp-popgen_2.4.1.orig.tar.gz
dpkg-source: info: unpacking libbpp-popgen_2.4.1-1.debian.tar.xz
dpkg-source: info: applying unforce-cxxflags.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-1b6d4cce-cbee-45fa-bc7b-401c311ad70c
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package libbpp-popgen
dpkg-buildpackage: info: source version 2.4.1-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build libbpp-popgen-2.4.1
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" ..
-- The CXX compiler identification is GNU 8.1.0
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- bpp-core 4.1.0 found:
-- static lib: /usr/lib/arm-linux-gnueabihf/libbpp-core.a
-- shared lib: /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0
-- includes: /usr/include
-- bpp-seq 12.0.0 found:
-- static lib: /usr/lib/arm-linux-gnueabihf/libbpp-seq.a
-- shared lib: /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0
-- includes: /usr/include
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
-- Build files have been written to: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
dh_auto_build -a
cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -H/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/bpp-popgen-shared.dir/build.make src/CMakeFiles/bpp-popgen-shared.dir/depend
make -f src/CMakeFiles/bpp-popgen-static.dir/build.make src/CMakeFiles/bpp-popgen-static.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src/CMakeFiles/bpp-popgen-shared.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src/CMakeFiles/bpp-popgen-static.dir/DependInfo.cmake --color=
Scanning dependencies of target bpp-popgen-shared
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make -f src/CMakeFiles/bpp-popgen-shared.dir/build.make src/CMakeFiles/bpp-popgen-shared.dir/build
make -f src/CMakeFiles/bpp-popgen-static.dir/build.make src/CMakeFiles/bpp-popgen-static.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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[ 6%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/BasicAlleleInfo.cpp.o
[ 6%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/BasicAlleleInfo.cpp.o
[ 6%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/BiAlleleMonolocusGenotype.cpp.o
[ 6%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/BiAlleleMonolocusGenotype.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/BasicAlleleInfo.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/BasicAlleleInfo.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/BasicAlleleInfo.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/BasicAlleleInfo.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/BiAlleleMonolocusGenotype.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/BiAlleleMonolocusGenotype.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/BiAlleleMonolocusGenotype.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/BiAlleleMonolocusGenotype.cpp
[ 8%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/AnalyzedLoci.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/AnalyzedLoci.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/AnalyzedLoci.cpp
[ 9%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/AnalyzedSequences.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/AnalyzedSequences.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/AnalyzedSequences.cpp
[ 11%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/AnalyzedLoci.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/AnalyzedLoci.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/AnalyzedLoci.cpp
[ 12%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/DataSet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/DataSet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/DataSet.cpp
[ 14%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/DataSetTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/DataSetTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/DataSetTools.cpp
[ 16%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/AnalyzedSequences.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/AnalyzedSequences.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/AnalyzedSequences.cpp
[ 17%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/DataSet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/DataSet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/DataSet.cpp
[ 19%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/DataSetTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/DataSetTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/DataSetTools.cpp
[ 20%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Date.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Date.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Date.cpp
[ 22%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Group.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Group.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Group.cpp
[ 24%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Individual.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Individual.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Individual.cpp
[ 25%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Date.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Date.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Date.cpp
[ 27%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/AbstractIDataSet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/AbstractIDataSet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/AbstractIDataSet.cpp
[ 29%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Group.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Group.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Group.cpp
[ 30%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/AbstractODataSet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/AbstractODataSet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/AbstractODataSet.cpp
[ 32%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Individual.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Individual.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Individual.cpp
[ 33%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinDon.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinDon.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/Darwin/DarwinDon.cpp
[ 35%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinVarSingle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinVarSingle.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/Darwin/DarwinVarSingle.cpp
[ 37%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp
[ 38%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/AbstractIDataSet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/AbstractIDataSet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/AbstractIDataSet.cpp
[ 40%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/AbstractODataSet.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/AbstractODataSet.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/AbstractODataSet.cpp
[ 41%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Genepop/Genepop.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Genepop/Genepop.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/Genepop/Genepop.cpp
[ 43%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Genetix/Genetix.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Genetix/Genetix.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/Genetix/Genetix.cpp
[ 45%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinDon.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinDon.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/Darwin/DarwinDon.cpp
In file included from /usr/include/c++/8/vector:69,
from /usr/include/Bpp/Io/FileTools.h:46,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.h:44,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp:40:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const bpp::GeneMapperCsvExport::Allele&}; _Tp = bpp::GeneMapperCsvExport::Allele; _Alloc = std::allocator<bpp::GeneMapperCsvExport::Allele>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<bpp::GeneMapperCsvExport::Allele>::iterator' {aka '__gnu_cxx::__normal_iterator<bpp::GeneMapperCsvExport::Allele*, std::vector<bpp::GeneMapperCsvExport::Allele> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /usr/include/Bpp/Io/FileTools.h:46,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.h:44,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp:40:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'bpp::GeneMapperCsvExport::Record::Record(const string&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<bpp::GeneMapperCsvExport::Allele*, std::vector<bpp::GeneMapperCsvExport::Allele> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
[ 46%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinVarSingle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinVarSingle.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/Darwin/DarwinVarSingle.cpp
[ 48%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp
[ 50%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Genepop/Genepop.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Genepop/Genepop.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/Genepop/Genepop.cpp
[ 51%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/PopgenlibIO.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/PopgenlibIO.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/PopgenlibIO.cpp
[ 53%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/MultiSeqIndividual.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/MultiSeqIndividual.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/MultiSeqIndividual.cpp
In file included from /usr/include/c++/8/vector:69,
from /usr/include/Bpp/Io/FileTools.h:46,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.h:44,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp:40:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const bpp::GeneMapperCsvExport::Allele&}; _Tp = bpp::GeneMapperCsvExport::Allele; _Alloc = std::allocator<bpp::GeneMapperCsvExport::Allele>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<bpp::GeneMapperCsvExport::Allele>::iterator' {aka '__gnu_cxx::__normal_iterator<bpp::GeneMapperCsvExport::Allele*, std::vector<bpp::GeneMapperCsvExport::Allele> >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /usr/include/Bpp/Io/FileTools.h:46,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.h:44,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp:40:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'bpp::GeneMapperCsvExport::Record::Record(const string&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<bpp::GeneMapperCsvExport::Allele*, std::vector<bpp::GeneMapperCsvExport::Allele> >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
[ 54%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Genetix/Genetix.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Genetix/Genetix.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/Genetix/Genetix.cpp
[ 56%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/PopgenlibIO.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/PopgenlibIO.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/Io/PopgenlibIO.cpp
[ 58%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/GeneralExceptions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/GeneralExceptions.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/GeneralExceptions.cpp
[ 59%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/MultiSeqIndividual.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/MultiSeqIndividual.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/DataSet/MultiSeqIndividual.cpp
[ 61%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/LocusInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/LocusInfo.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/LocusInfo.cpp
[ 62%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MonoAlleleMonolocusGenotype.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MonoAlleleMonolocusGenotype.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/MonoAlleleMonolocusGenotype.cpp
[ 64%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MonolocusGenotypeTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MonolocusGenotypeTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/MonolocusGenotypeTools.cpp
[ 66%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MultiAlleleMonolocusGenotype.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MultiAlleleMonolocusGenotype.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/MultiAlleleMonolocusGenotype.cpp
[ 67%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MultilocusGenotype.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MultilocusGenotype.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/MultilocusGenotype.cpp
[ 69%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/GeneralExceptions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/GeneralExceptions.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/GeneralExceptions.cpp
[ 70%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MultilocusGenotypeStatistics.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MultilocusGenotypeStatistics.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/MultilocusGenotypeStatistics.cpp
[ 72%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismMultiGContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismMultiGContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/PolymorphismMultiGContainer.cpp
[ 74%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/LocusInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/LocusInfo.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/LocusInfo.cpp
[ 75%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MonoAlleleMonolocusGenotype.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MonoAlleleMonolocusGenotype.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/MonoAlleleMonolocusGenotype.cpp
[ 77%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismMultiGContainerTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismMultiGContainerTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/PolymorphismMultiGContainerTools.cpp
[ 79%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MonolocusGenotypeTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MonolocusGenotypeTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/MonolocusGenotypeTools.cpp
[ 80%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismSequenceContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismSequenceContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/PolymorphismSequenceContainer.cpp
In file included from /usr/include/c++/8/map:60,
from /usr/include/Bpp/Utils/MapTools.h:43,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/MultilocusGenotypeStatistics.cpp:41:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const unsigned int&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, double>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, double> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
from /usr/include/Bpp/Utils/MapTools.h:43,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/MultilocusGenotypeStatistics.cpp:41:
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, double> bpp::MultilocusGenotypeStatistics::getAllelesFrqForGroups(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 82%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MultiAlleleMonolocusGenotype.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MultiAlleleMonolocusGenotype.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/MultiAlleleMonolocusGenotype.cpp
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, double> bpp::MultilocusGenotypeStatistics::getHeterozygousFrqForGroups(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, bpp::MultilocusGenotypeStatistics::VarComp> bpp::MultilocusGenotypeStatistics::getVarianceComponents(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 83%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MultilocusGenotype.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MultilocusGenotype.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/MultilocusGenotype.cpp
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, double> bpp::MultilocusGenotypeStatistics::getAllelesFit(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, double> bpp::MultilocusGenotypeStatistics::getAllelesFst(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, double> bpp::MultilocusGenotypeStatistics::getAllelesFis(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In static member function 'static double bpp::MultilocusGenotypeStatistics::getRHMultilocusFst(const bpp::PolymorphismMultiGContainer&, std::vector<unsigned int>, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 85%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MultilocusGenotypeStatistics.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MultilocusGenotypeStatistics.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/MultilocusGenotypeStatistics.cpp
[ 87%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismMultiGContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismMultiGContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/PolymorphismMultiGContainer.cpp
[ 88%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismMultiGContainerTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismMultiGContainerTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/PolymorphismMultiGContainerTools.cpp
[ 90%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismSequenceContainerTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismSequenceContainerTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/PolymorphismSequenceContainerTools.cpp
In file included from /usr/include/c++/8/map:60,
from /usr/include/Bpp/Utils/MapTools.h:43,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/MultilocusGenotypeStatistics.cpp:41:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const unsigned int&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, double>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, double> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
from /usr/include/Bpp/Utils/MapTools.h:43,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/MultilocusGenotypeStatistics.cpp:41:
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, double> bpp::MultilocusGenotypeStatistics::getAllelesFrqForGroups(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 91%] Building CXX object src/CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/SequenceStatistics.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -Dbpp_popgen_shared_EXPORTS -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/SequenceStatistics.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.cpp
[ 93%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismSequenceContainer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismSequenceContainer.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/PolymorphismSequenceContainer.cpp
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, double> bpp::MultilocusGenotypeStatistics::getHeterozygousFrqForGroups(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, bpp::MultilocusGenotypeStatistics::VarComp> bpp::MultilocusGenotypeStatistics::getVarianceComponents(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, double> bpp::MultilocusGenotypeStatistics::getAllelesFit(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, double> bpp::MultilocusGenotypeStatistics::getAllelesFst(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In static member function 'static std::map<unsigned int, double> bpp::MultilocusGenotypeStatistics::getAllelesFis(const bpp::PolymorphismMultiGContainer&, size_t, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In static member function 'static double bpp::MultilocusGenotypeStatistics::getRHMultilocusFst(const bpp::PolymorphismMultiGContainer&, std::vector<unsigned int>, const std::set<unsigned int>&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, double>, std::_Select1st<std::pair<const unsigned int, double> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, double> >'} changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 95%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismSequenceContainerTools.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismSequenceContainerTools.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/PolymorphismSequenceContainerTools.cpp
[ 96%] Building CXX object src/CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/SequenceStatistics.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -I/<<PKGBUILDDIR>>/src -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/SequenceStatistics.cpp.o -c /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.cpp
In file included from /usr/include/c++/8/vector:69,
from /usr/include/Bpp/Seq/Alphabet/Alphabet.h:45,
from /usr/include/Bpp/Seq/SymbolList.h:43,
from /usr/include/Bpp/Seq/SymbolListTools.h:43,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.h:48,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.cpp:43:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double, std::allocator<double> >::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:60,
from /usr/include/Bpp/Seq/SymbolListTools.h:48,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.h:48,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.cpp:43:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
from /usr/include/Bpp/Seq/Alphabet/Alphabet.h:45,
from /usr/include/Bpp/Seq/SymbolList.h:43,
from /usr/include/Bpp/Seq/SymbolListTools.h:43,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.h:48,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.cpp:43:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static bpp::Vdouble bpp::SequenceStatistics::pairwiseDprime(const bpp::PolymorphismSequenceContainer&, bool, double)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static bpp::Vdouble bpp::SequenceStatistics::pairwiseR2(const bpp::PolymorphismSequenceContainer&, bool, double)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
from /usr/include/Bpp/Seq/Alphabet/Alphabet.h:45,
from /usr/include/Bpp/Seq/SymbolList.h:43,
from /usr/include/Bpp/Seq/SymbolListTools.h:43,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.h:48,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.cpp:43:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double, std::allocator<double> >::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >'} changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
[ 98%] Linking CXX shared library libbpp-popgen.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpp-popgen-shared.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libbpp-popgen.so.8 -o libbpp-popgen.so.8.0.0 CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/BasicAlleleInfo.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/BiAlleleMonolocusGenotype.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/AnalyzedLoci.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/AnalyzedSequences.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/DataSet.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/DataSetTools.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Date.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Group.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Individual.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/AbstractIDataSet.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/AbstractODataSet.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinDon.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinVarSingle.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Genepop/Genepop.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/Genetix/Genetix.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/Io/PopgenlibIO.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/DataSet/MultiSeqIndividual.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/GeneralExceptions.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/LocusInfo.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MonoAlleleMonolocusGenotype.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MonolocusGenotypeTools.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MultiAlleleMonolocusGenotype.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MultilocusGenotype.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/MultilocusGenotypeStatistics.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismMultiGContainer.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismMultiGContainerTools.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismSequenceContainer.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/PolymorphismSequenceContainerTools.cpp.o CMakeFiles/bpp-popgen-shared.dir/Bpp/PopGen/SequenceStatistics.cpp.o /usr/lib/arm-linux-gnueabihf/libbpp-seq.so.12.0.0 /usr/lib/arm-linux-gnueabihf/libbpp-core.so.4.1.0
In file included from /usr/include/c++/8/map:60,
from /usr/include/Bpp/Seq/SymbolListTools.h:48,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.h:48,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.cpp:43:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_symlink_library libbpp-popgen.so.8.0.0 libbpp-popgen.so.8 libbpp-popgen.so
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target bpp-popgen-shared
In file included from /usr/include/c++/8/vector:64,
from /usr/include/Bpp/Seq/Alphabet/Alphabet.h:45,
from /usr/include/Bpp/Seq/SymbolList.h:43,
from /usr/include/Bpp/Seq/SymbolListTools.h:43,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.h:48,
from /<<PKGBUILDDIR>>/src/Bpp/PopGen/SequenceStatistics.cpp:43:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static bpp::Vdouble bpp::SequenceStatistics::pairwiseDprime(const bpp::PolymorphismSequenceContainer&, bool, double)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static bpp::Vdouble bpp::SequenceStatistics::pairwiseR2(const bpp::PolymorphismSequenceContainer&, bool, double)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double, std::allocator<double> > >' changed in GCC 7.1
_M_realloc_insert(end(), __x);
^~~~~~~~~~~~~~~~~
[100%] Linking CXX static library libbpp-popgen.a
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -P CMakeFiles/bpp-popgen-static.dir/cmake_clean_target.cmake
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/bpp-popgen-static.dir/link.txt --verbose=1
/usr/bin/ar qc libbpp-popgen.a CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/BasicAlleleInfo.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/BiAlleleMonolocusGenotype.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/AnalyzedLoci.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/AnalyzedSequences.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/DataSet.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/DataSetTools.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Date.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Group.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Individual.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/AbstractIDataSet.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/AbstractODataSet.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinDon.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Darwin/DarwinVarSingle.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Genepop/Genepop.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/Genetix/Genetix.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/Io/PopgenlibIO.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/DataSet/MultiSeqIndividual.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/GeneralExceptions.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/LocusInfo.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MonoAlleleMonolocusGenotype.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MonolocusGenotypeTools.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MultiAlleleMonolocusGenotype.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MultilocusGenotype.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/MultilocusGenotypeStatistics.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismMultiGContainer.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismMultiGContainerTools.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismSequenceContainer.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/PolymorphismSequenceContainerTools.cpp.o CMakeFiles/bpp-popgen-static.dir/Bpp/PopGen/SequenceStatistics.cpp.o
/usr/bin/ranlib libbpp-popgen.a
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target bpp-popgen-static
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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dh_auto_test -a
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dh_testroot -a
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cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/bpp-popgen-shared.dir/build.make src/CMakeFiles/bpp-popgen-shared.dir/depend
make -f src/CMakeFiles/bpp-popgen-static.dir/build.make src/CMakeFiles/bpp-popgen-static.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src/CMakeFiles/bpp-popgen-shared.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src/CMakeFiles/bpp-popgen-static.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make -f src/CMakeFiles/bpp-popgen-shared.dir/build.make src/CMakeFiles/bpp-popgen-shared.dir/build
make -f src/CMakeFiles/bpp-popgen-static.dir/build.make src/CMakeFiles/bpp-popgen-static.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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[100%] Built target bpp-popgen-shared
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make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/bpp-popgen/bpp-popgen-config.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/bpp-popgen/bpp-popgen-config-version.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-popgen.a
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-popgen.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/LocusInfo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/AlleleInfo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/PolymorphismMultiGContainerTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/MultilocusGenotypeStatistics.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/PolymorphismMultiGContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/MultilocusGenotype.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/GeneralExceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/SequenceStatistics.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/AnalyzedLoci.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/DataSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Locality.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/DataSetTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/Genepop
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/Genepop/Genepop.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/PopgenlibIO.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/AbstractIDataSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/Genetix
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/Genetix/Genetix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/Darwin
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/Darwin/DarwinDon.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/Darwin/DarwinVarSingle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/AbstractODataSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/IODataSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/IDataSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/GeneMapper
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Io/ODataSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Individual.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Date.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/MultiSeqIndividual.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/AnalyzedSequences.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/DataSet/Group.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/BasicAlleleInfo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/MonoAlleleMonolocusGenotype.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/BiAlleleMonolocusGenotype.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/PolymorphismSequenceContainerTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/MonolocusGenotype.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/MonolocusGenotypeTools.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/PolymorphismSequenceContainer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/Bpp/PopGen/MultiAlleleMonolocusGenotype.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/bpp-popgen/bpp-popgen-targets.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/bpp-popgen/bpp-popgen-targets-none.cmake
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
d-shlibmove --commit \
--multiarch \
--devunversioned \
--exclude-la \
--movedev debian/tmp/usr/include/* usr/include \
--movedev debian/tmp/usr/lib/*/cmake usr/lib/arm-linux-gnueabihf \
debian/tmp/usr/lib/*/*.so
Library package automatic movement utility
--> libbpp-core-dev package exists.
--> libbpp-seq-dev package exists.
set -e
install -d -m 755 debian/libbpp-popgen-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libbpp-popgen8/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-popgen.a debian/libbpp-popgen-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-popgen.so debian/libbpp-popgen-dev/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8 debian/libbpp-popgen8/usr/lib/arm-linux-gnueabihf
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 debian/libbpp-popgen8/usr/lib/arm-linux-gnueabihf
PKGDEV=libbpp-popgen-dev
PKGSHL=libbpp-popgen8
install -d -m 755 debian/libbpp-popgen-dev/usr/include
mv debian/tmp/usr/include/Bpp debian/libbpp-popgen-dev/usr/include
install -d -m 755 debian/libbpp-popgen-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/cmake debian/libbpp-popgen-dev/usr/lib/arm-linux-gnueabihf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_strip -a
debian/rules override_dh_makeshlibs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
echo "Symbols file for architecture armhf is not provided"
Symbols file for architecture armhf is not provided
mkdir -p debian/hidesymbols
mv debian/*.symbols debian/hidesymbols
dh_makeshlibs
# restore original debian/ dir to enable building twice in a row
mv debian/hidesymbols/*.symbols debian
rmdir debian/hidesymbols
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_shlibdeps -a
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libbpp-popgen8/usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0 found in none of the libraries
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: package libbpp-popgen-dev: unused substitution variable ${devlibs:Depends}
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'libbpp-popgen-dev' in '../libbpp-popgen-dev_2.4.1-1_armhf.deb'.
dpkg-deb: building package 'libbpp-popgen8' in '../libbpp-popgen8_2.4.1-1_armhf.deb'.
dpkg-deb: building package 'libbpp-popgen8-dbgsym' in '../libbpp-popgen8-dbgsym_2.4.1-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../libbpp-popgen_2.4.1-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build libbpp-popgen-2.4.1
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-08-28T16:41:06Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
libbpp-popgen_2.4.1-1_armhf.changes:
------------------------------------
Format: 1.8
Date: Wed, 22 Aug 2018 22:22:42 +0200
Source: libbpp-popgen
Binary: libbpp-popgen-dev libbpp-popgen8
Architecture: armhf
Version: 2.4.1-1
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
libbpp-popgen-dev - Bio++ Population Genetics library development files
libbpp-popgen8 - Bio++ Population Genetics library
Closes: 897782
Changes:
libbpp-popgen (2.4.1-1) unstable; urgency=medium
.
[ Julien Dutheil ]
* New upstream version
Closes: #897782
.
[ Andreas Tille ]
* Standards-Version: 4.2.0
Checksums-Sha1:
6b0b664110df1ddb3840c3b05af24e8bd7c73c28 255736 libbpp-popgen-dev_2.4.1-1_armhf.deb
2b87c6e174b960f0697dde968872be306cd422f3 3850368 libbpp-popgen8-dbgsym_2.4.1-1_armhf.deb
43b1837110124cbeedc5447b74c9d7445f149ec0 178344 libbpp-popgen8_2.4.1-1_armhf.deb
74f9b81d57b19100282643683e45d1bb5df56f83 6796 libbpp-popgen_2.4.1-1_armhf.buildinfo
Checksums-Sha256:
34e96441749c19e55cce9ddb648a2406d6b09580166fb5b62e1cf4936d38c9bd 255736 libbpp-popgen-dev_2.4.1-1_armhf.deb
639eb6dd795fa28afe0372cf92741c39e0c735e7690db0733432a6144c203f37 3850368 libbpp-popgen8-dbgsym_2.4.1-1_armhf.deb
0ab94715b80741d82f985f41b3baff60f1ebde10cd36b496f91f8f4bb8df6b76 178344 libbpp-popgen8_2.4.1-1_armhf.deb
3797814ba989d6aeccb5ebbf6670cbf12d617a21c92e1cf2f1737d940d06969c 6796 libbpp-popgen_2.4.1-1_armhf.buildinfo
Files:
81d11eaddd1495a1c0f37b97cb3cd9a5 255736 libdevel optional libbpp-popgen-dev_2.4.1-1_armhf.deb
de6e4a0f7e44cbe950ed12a7bbe8d830 3850368 debug optional libbpp-popgen8-dbgsym_2.4.1-1_armhf.deb
d8c759738c31cfb57ae93675d59ea37e 178344 libs optional libbpp-popgen8_2.4.1-1_armhf.deb
e260f03aa2c43f3b245d3cd605c7a15e 6796 science optional libbpp-popgen_2.4.1-1_armhf.buildinfo
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libbpp-popgen-dev_2.4.1-1_armhf.deb
-----------------------------------
new Debian package, version 2.0.
size 255736 bytes: control archive=2068 bytes.
907 bytes, 19 lines control
3714 bytes, 44 lines md5sums
Package: libbpp-popgen-dev
Source: libbpp-popgen
Version: 2.4.1-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1760
Depends: libbpp-popgen8 (= 2.4.1-1), libbpp-core-dev (>= 2.4.1), libbpp-seq-dev (>= 2.4.1)
Section: libdevel
Priority: optional
Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
Description: Bio++ Population Genetics library development files
Bio++ is a set of C++ libraries for Bioinformatics, including sequence
analysis, phylogenetics, molecular evolution and population genetics.
Bio++ is Object Oriented and is designed to be both easy to use and
computer efficient. Bio++ intends to help programmers to write computer
expensive programs, by providing them a set of re-usable tools.
.
This package contains the static library and the header files of the
Bio++ Population Genetics classes.
drwxr-xr-x root/root 0 2018-08-22 20:22 ./
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/include/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/include/Bpp/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/include/Bpp/PopGen/
-rw-r--r-- root/root 2638 2018-08-13 12:27 ./usr/include/Bpp/PopGen/AlleleInfo.h
-rw-r--r-- root/root 3212 2018-08-13 12:27 ./usr/include/Bpp/PopGen/BasicAlleleInfo.h
-rw-r--r-- root/root 3639 2018-08-13 12:27 ./usr/include/Bpp/PopGen/BiAlleleMonolocusGenotype.h
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/include/Bpp/PopGen/DataSet/
-rw-r--r-- root/root 4846 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/AnalyzedLoci.h
-rw-r--r-- root/root 3788 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/AnalyzedSequences.h
-rw-r--r-- root/root 25725 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/DataSet.h
-rw-r--r-- root/root 2623 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/DataSetTools.h
-rw-r--r-- root/root 4765 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Date.h
-rw-r--r-- root/root 17193 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Group.h
-rw-r--r-- root/root 13765 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Individual.h
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/include/Bpp/PopGen/DataSet/Io/
-rw-r--r-- root/root 2460 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Io/AbstractIDataSet.h
-rw-r--r-- root/root 2358 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Io/AbstractODataSet.h
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/include/Bpp/PopGen/DataSet/Io/Darwin/
-rw-r--r-- root/root 2781 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Io/Darwin/DarwinDon.h
-rw-r--r-- root/root 2946 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Io/Darwin/DarwinVarSingle.h
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/include/Bpp/PopGen/DataSet/Io/GeneMapper/
-rw-r--r-- root/root 5684 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Io/GeneMapper/GeneMapperCsvExport.h
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/include/Bpp/PopGen/DataSet/Io/Genepop/
-rw-r--r-- root/root 2862 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Io/Genepop/Genepop.h
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/include/Bpp/PopGen/DataSet/Io/Genetix/
-rw-r--r-- root/root 2875 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Io/Genetix/Genetix.h
-rw-r--r-- root/root 2561 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Io/IDataSet.h
-rw-r--r-- root/root 2438 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Io/IODataSet.h
-rw-r--r-- root/root 2378 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Io/ODataSet.h
-rw-r--r-- root/root 5773 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Io/PopgenlibIO.h
-rw-r--r-- root/root 3707 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/Locality.h
-rw-r--r-- root/root 10470 2018-08-13 12:27 ./usr/include/Bpp/PopGen/DataSet/MultiSeqIndividual.h
-rw-r--r-- root/root 8100 2018-08-13 12:27 ./usr/include/Bpp/PopGen/GeneralExceptions.h
-rw-r--r-- root/root 4154 2018-08-13 12:27 ./usr/include/Bpp/PopGen/LocusInfo.h
-rw-r--r-- root/root 3282 2018-08-13 12:27 ./usr/include/Bpp/PopGen/MonoAlleleMonolocusGenotype.h
-rw-r--r-- root/root 2835 2018-08-13 12:27 ./usr/include/Bpp/PopGen/MonolocusGenotype.h
-rw-r--r-- root/root 2961 2018-08-13 12:27 ./usr/include/Bpp/PopGen/MonolocusGenotypeTools.h
-rw-r--r-- root/root 3554 2018-08-13 12:27 ./usr/include/Bpp/PopGen/MultiAlleleMonolocusGenotype.h
-rw-r--r-- root/root 4754 2018-08-13 12:27 ./usr/include/Bpp/PopGen/MultilocusGenotype.h
-rw-r--r-- root/root 13220 2018-08-13 12:27 ./usr/include/Bpp/PopGen/MultilocusGenotypeStatistics.h
-rw-r--r-- root/root 5743 2018-08-13 12:27 ./usr/include/Bpp/PopGen/PolymorphismMultiGContainer.h
-rw-r--r-- root/root 4735 2018-08-13 12:27 ./usr/include/Bpp/PopGen/PolymorphismMultiGContainerTools.h
-rw-r--r-- root/root 13432 2018-08-13 12:27 ./usr/include/Bpp/PopGen/PolymorphismSequenceContainer.h
-rw-r--r-- root/root 10189 2018-08-13 12:27 ./usr/include/Bpp/PopGen/PolymorphismSequenceContainerTools.h
-rw-r--r-- root/root 45403 2018-08-13 12:27 ./usr/include/Bpp/PopGen/SequenceStatistics.h
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/lib/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/cmake/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/cmake/bpp-popgen/
-rw-r--r-- root/root 1607 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/cmake/bpp-popgen/bpp-popgen-config-version.cmake
-rw-r--r-- root/root 2288 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/cmake/bpp-popgen/bpp-popgen-config.cmake
-rw-r--r-- root/root 1542 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/cmake/bpp-popgen/bpp-popgen-targets-none.cmake
-rw-r--r-- root/root 3961 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/cmake/bpp-popgen/bpp-popgen-targets.cmake
-rw-r--r-- root/root 1472216 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/libbpp-popgen.a
lrwxrwxrwx root/root 0 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/libbpp-popgen.so -> libbpp-popgen.so.8
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/share/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/share/doc/libbpp-popgen-dev/
-rw-r--r-- root/root 1294 2018-08-22 20:22 ./usr/share/doc/libbpp-popgen-dev/changelog.Debian.gz
-rw-r--r-- root/root 1523 2018-08-13 12:27 ./usr/share/doc/libbpp-popgen-dev/changelog.gz
-rw-r--r-- root/root 23170 2018-08-22 20:22 ./usr/share/doc/libbpp-popgen-dev/copyright
libbpp-popgen8-dbgsym_2.4.1-1_armhf.deb
---------------------------------------
new Debian package, version 2.0.
size 3850368 bytes: control archive=556 bytes.
415 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: libbpp-popgen8-dbgsym
Source: libbpp-popgen
Version: 2.4.1-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 3944
Depends: libbpp-popgen8 (= 2.4.1-1)
Section: debug
Priority: optional
Multi-Arch: same
Description: debug symbols for libbpp-popgen8
Build-Ids: c9a03be649b73ce0418198816ca800a63a519b38
drwxr-xr-x root/root 0 2018-08-22 20:22 ./
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/lib/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/lib/debug/.build-id/c9/
-rw-r--r-- root/root 4027808 2018-08-22 20:22 ./usr/lib/debug/.build-id/c9/a03be649b73ce0418198816ca800a63a519b38.debug
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/share/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-08-22 20:22 ./usr/share/doc/libbpp-popgen8-dbgsym -> libbpp-popgen8
libbpp-popgen8_2.4.1-1_armhf.deb
--------------------------------
new Debian package, version 2.0.
size 178344 bytes: control archive=1036 bytes.
880 bytes, 20 lines control
317 bytes, 4 lines md5sums
31 bytes, 1 lines shlibs
67 bytes, 2 lines triggers
Package: libbpp-popgen8
Source: libbpp-popgen
Version: 2.4.1-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 648
Depends: libbpp-core4, libbpp-seq12, libc6 (>= 2.4), libgcc1 (>= 1:3.5), libstdc++6 (>= 5.2)
Section: libs
Priority: optional
Multi-Arch: same
Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
Description: Bio++ Population Genetics library
Bio++ is a set of C++ libraries for Bioinformatics, including sequence
analysis, phylogenetics, molecular evolution and population genetics.
Bio++ is Object Oriented and is designed to be both easy to use and
computer efficient. Bio++ intends to help programmers to write computer
expensive programs, by providing them a set of re-usable tools.
.
This package contains the dynamic library of the Bio++ Population
Genetics classes.
drwxr-xr-x root/root 0 2018-08-22 20:22 ./
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/lib/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8 -> libbpp-popgen.so.8.0.0
-rw-r--r-- root/root 624044 2018-08-22 20:22 ./usr/lib/arm-linux-gnueabihf/libbpp-popgen.so.8.0.0
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/share/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-08-22 20:22 ./usr/share/doc/libbpp-popgen8/
-rw-r--r-- root/root 1294 2018-08-22 20:22 ./usr/share/doc/libbpp-popgen8/changelog.Debian.gz
-rw-r--r-- root/root 1523 2018-08-13 12:27 ./usr/share/doc/libbpp-popgen8/changelog.gz
-rw-r--r-- root/root 23170 2018-08-22 20:22 ./usr/share/doc/libbpp-popgen8/copyright
+------------------------------------------------------------------------------+
| Post Build |
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+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 94844
Build-Time: 112
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 169
Job: libbpp-popgen_2.4.1-1
Machine Architecture: armhf
Package: libbpp-popgen
Package-Time: 299
Source-Version: 2.4.1-1
Space: 94844
Status: successful
Version: 2.4.1-1
--------------------------------------------------------------------------------
Finished at 2018-08-28T16:41:06Z
Build needed 00:04:59, 94844k disk space