Raspbian Package Auto-Building

Build log for lastz (1.04.22-2) on armhf

lastz1.04.22-2armhf → 2022-11-20 06:26:56

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard

+==============================================================================+
| lastz 1.04.22-2 (armhf)                      Sun, 20 Nov 2022 06:14:35 +0000 |
+==============================================================================+

Package: lastz
Version: 1.04.22-2
Source Version: 1.04.22-2
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-12693def-24e0-4b7f-aecc-40e9045c14c7' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.4 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.3 MB]
Fetched 27.7 MB in 31s (908 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'lastz' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/lastz.git
Please use:
git clone https://salsa.debian.org/med-team/lastz.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 5379 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main lastz 1.04.22-2 (dsc) [2025 B]
Get:2 http://172.17.4.1/private bookworm-staging/main lastz 1.04.22-2 (tar) [5368 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main lastz 1.04.22-2 (diff) [9220 B]
Fetched 5379 kB in 1s (3877 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/lastz-YXPw7E/lastz-1.04.22' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/lastz-YXPw7E' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-HUjZXD/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-HUjZXD/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-HUjZXD/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2770 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libpam-cap libperl5.34 netbase perl-modules-5.34 sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 65 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (23.3 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 14774 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-python, python3
Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3
dpkg-deb: building package 'sbuild-build-depends-lastz-dummy' in '/<<BUILDDIR>>/resolver-HUjZXD/apt_archive/sbuild-build-depends-lastz-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-lastz-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ Sources [503 B]
Get:5 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ Packages [580 B]
Fetched 2416 B in 1s (3319 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install lastz build dependencies (apt-based resolver)
-----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libpam-cap libperl5.34 netbase perl-modules-5.34
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl
  libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl
  libicu72 libmagic-mgc libmagic1 libmpdec3 libpipeline1 libpython3-stdlib
  libpython3.10-minimal libpython3.10-stdlib libsub-override-perl libtool
  libuchardet0 libxml2 m4 man-db media-types po-debconf python3
  python3-distutils python3-lib2to3 python3-minimal python3.10
  python3.10-minimal
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc dh-make flit python3-build
  python3-tomli python3-installer gettext-doc libasprintf-dev libgettextpo-dev
  groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less
  www-browser libmail-box-perl python3-doc python3-tk python3-venv
  python3.10-venv python3.10-doc binfmt-support
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils debhelper
  dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
  gettext-base groff-base intltool-debian libarchive-zip-perl
  libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl
  libicu72 libmagic-mgc libmagic1 libmpdec3 libpipeline1 libpython3-stdlib
  libpython3.10-minimal libpython3.10-stdlib libsub-override-perl libtool
  libuchardet0 libxml2 m4 man-db media-types po-debconf python3
  python3-distutils python3-lib2to3 python3-minimal python3.10
  python3.10-minimal sbuild-build-depends-lastz-dummy
0 upgraded, 43 newly installed, 0 to remove and 65 not upgraded.
Need to get 22.9 MB of archives.
After this operation, 93.3 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-HUjZXD/apt_archive ./ sbuild-build-depends-lastz-dummy 0.invalid.0 [872 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.8-3 [769 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.8-3 [1478 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.10.6-1 [38.7 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf media-types all 8.0.0 [33.4 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.8-3 [1597 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf python3.10 armhf 3.10.8-3 [506 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.10.6-1 [21.7 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.10.6-1 [38.2 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-8 [793 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-1.1 [78.2 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.0-1 [1299 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-4 [295 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-4 [120 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-4 [65.8 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-9 [171 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-1 [260 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-9 [510 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.10.1 [79.9 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-4 [526 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-1 [15.8 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14+20220924-2 [93.1 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-2 [9008 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1 [570 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-9 [1220 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.10.1 [940 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf python3-lib2to3 all 3.10.8-1 [77.3 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf python3-distutils all 3.10.8-1 [139 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf dh-python all 5.20220819+rpi1 [114 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 22.9 MB in 5s (4171 kB/s)
Selecting previously unselected package libpython3.10-minimal:armhf.
(Reading database ... 14774 files and directories currently installed.)
Preparing to unpack .../libpython3.10-minimal_3.10.8-3_armhf.deb ...
Unpacking libpython3.10-minimal:armhf (3.10.8-3) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../libexpat1_2.5.0-1_armhf.deb ...
Unpacking libexpat1:armhf (2.5.0-1) ...
Selecting previously unselected package python3.10-minimal.
Preparing to unpack .../python3.10-minimal_3.10.8-3_armhf.deb ...
Unpacking python3.10-minimal (3.10.8-3) ...
Setting up libpython3.10-minimal:armhf (3.10.8-3) ...
Setting up libexpat1:armhf (2.5.0-1) ...
Setting up python3.10-minimal (3.10.8-3) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 15079 files and directories currently installed.)
Preparing to unpack .../0-python3-minimal_3.10.6-1_armhf.deb ...
Unpacking python3-minimal (3.10.6-1) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_8.0.0_all.deb ...
Unpacking media-types (8.0.0) ...
Selecting previously unselected package libmpdec3:armhf.
Preparing to unpack .../2-libmpdec3_2.5.1-2+rpi1_armhf.deb ...
Unpacking libmpdec3:armhf (2.5.1-2+rpi1) ...
Selecting previously unselected package libpython3.10-stdlib:armhf.
Preparing to unpack .../3-libpython3.10-stdlib_3.10.8-3_armhf.deb ...
Unpacking libpython3.10-stdlib:armhf (3.10.8-3) ...
Selecting previously unselected package python3.10.
Preparing to unpack .../4-python3.10_3.10.8-3_armhf.deb ...
Unpacking python3.10 (3.10.8-3) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../5-libpython3-stdlib_3.10.6-1_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.10.6-1) ...
Setting up python3-minimal (3.10.6-1) ...
Selecting previously unselected package python3.
(Reading database ... 15481 files and directories currently installed.)
Preparing to unpack .../00-python3_3.10.6-1_armhf.deb ...
Unpacking python3 (3.10.6-1) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../02-groff-base_1.22.4-8_armhf.deb ...
Unpacking groff-base (1.22.4-8) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../03-bsdextrautils_2.38.1-1.1_armhf.deb ...
Unpacking bsdextrautils (2.38.1-1.1) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../04-libpipeline1_1.5.7-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.7-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../05-man-db_2.11.0-1_armhf.deb ...
Unpacking man-db (2.11.0-1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../06-libmagic-mgc_1%3a5.41-4_armhf.deb ...
Unpacking libmagic-mgc (1:5.41-4) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../07-libmagic1_1%3a5.41-4_armhf.deb ...
Unpacking libmagic1:armhf (1:5.41-4) ...
Selecting previously unselected package file.
Preparing to unpack .../08-file_1%3a5.41-4_armhf.deb ...
Unpacking file (1:5.41-4) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../09-gettext-base_0.21-9_armhf.deb ...
Unpacking gettext-base (0.21-9) ...
Selecting previously unselected package m4.
Preparing to unpack .../10-m4_1.4.19-1_armhf.deb ...
Unpacking m4 (1.4.19-1) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../11-autoconf_2.71-2_all.deb ...
Unpacking autoconf (2.71-2) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../14-autopoint_0.21-9_all.deb ...
Unpacking autopoint (0.21-9) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../15-libdebhelper-perl_13.10.1_all.deb ...
Unpacking libdebhelper-perl (13.10.1) ...
Selecting previously unselected package libtool.
Preparing to unpack .../16-libtool_2.4.7-4_all.deb ...
Unpacking libtool (2.4.7-4) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../17-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../19-libsub-override-perl_0.09-4_all.deb ...
Unpacking libsub-override-perl (0.09-4) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.0-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.13.0-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../21-dh-strip-nondeterminism_1.13.0-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.13.0-1) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../22-libelf1_0.187-2+rpi2_armhf.deb ...
Unpacking libelf1:armhf (0.187-2+rpi2) ...
Selecting previously unselected package dwz.
Preparing to unpack .../23-dwz_0.14+20220924-2_armhf.deb ...
Unpacking dwz (0.14+20220924-2) ...
Selecting previously unselected package libicu72:armhf.
Preparing to unpack .../24-libicu72_72.1-2_armhf.deb ...
Unpacking libicu72:armhf (72.1-2) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.1_armhf.deb ...
Unpacking libxml2:armhf (2.9.14+dfsg-1.1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../26-gettext_0.21-9_armhf.deb ...
Unpacking gettext (0.21-9) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.6) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../29-debhelper_13.10.1_all.deb ...
Unpacking debhelper (13.10.1) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../30-python3-lib2to3_3.10.8-1_all.deb ...
Unpacking python3-lib2to3 (3.10.8-1) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../31-python3-distutils_3.10.8-1_all.deb ...
Unpacking python3-distutils (3.10.8-1) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../32-dh-python_5.20220819+rpi1_all.deb ...
Unpacking dh-python (5.20220819+rpi1) ...
Selecting previously unselected package sbuild-build-depends-lastz-dummy.
Preparing to unpack .../33-sbuild-build-depends-lastz-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-lastz-dummy (0.invalid.0) ...
Setting up media-types (8.0.0) ...
Setting up libpipeline1:armhf (1.5.7-1) ...
Setting up libicu72:armhf (72.1-2) ...
Setting up bsdextrautils (2.38.1-1.1) ...
Setting up libmagic-mgc (1:5.41-4) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.10.1) ...
Setting up libmagic1:armhf (1:5.41-4) ...
Setting up gettext-base (0.21-9) ...
Setting up m4 (1.4.19-1) ...
Setting up file (1:5.41-4) ...
Setting up autotools-dev (20220109.1) ...
Setting up autopoint (0.21-9) ...
Setting up autoconf (2.71-2) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libmpdec3:armhf (2.5.1-2+rpi1) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libelf1:armhf (0.187-2+rpi2) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.0-1) ...
Setting up gettext (0.21-9) ...
Setting up libtool (2.4.7-4) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up libpython3.10-stdlib:armhf (3.10.8-3) ...
Setting up dh-autoreconf (20) ...
Setting up dh-strip-nondeterminism (1.13.0-1) ...
Setting up dwz (0.14+20220924-2) ...
Setting up groff-base (1.22.4-8) ...
Setting up libpython3-stdlib:armhf (3.10.6-1) ...
Setting up python3.10 (3.10.8-3) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up python3 (3.10.6-1) ...
Setting up man-db (2.11.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-lib2to3 (3.10.8-1) ...
Setting up python3-distutils (3.10.8-1) ...
Setting up dh-python (5.20220819+rpi1) ...
Setting up debhelper (13.10.1) ...
Setting up sbuild-build-depends-lastz-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.35-2+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.39-6+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-3+rpi1 gcc-12_12.2.0-3+rpi1 libc6-dev_2.35-2+rpi1 libstdc++-12-dev_12.2.0-3+rpi1 libstdc++6_12.2.0-3+rpi1 linux-libc-dev_5.19.6-1+rpi1
Package versions: adduser_3.129 apt_2.5.3 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-9 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2~rc2-2 binutils_2.39-6+rpi1 binutils-arm-linux-gnueabihf_2.39-6+rpi1 binutils-common_2.39-6+rpi1 bsdextrautils_2.38.1-1.1 bsdutils_1:2.38.1-1.1 build-essential_12.9 bzip2_1.0.8-5+b2 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-3+rpi1 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.79 debhelper_13.10.1 debianutils_5.7-0.3 dh-autoreconf_20 dh-python_5.20220819+rpi1 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dirmngr_2.2.39-1 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.14+20220924-2 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 file_1:5.41-4 findutils_4.9.0-3 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-3+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-3+rpi1 gcc-12-base_12.2.0-3+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-9 gettext-base_0.21-9 gnupg_2.2.39-1 gnupg-l10n_2.2.39-1 gnupg-utils_2.2.39-1 gpg_2.2.39-1 gpg-agent_2.2.39-1 gpg-wks-client_2.2.39-1 gpg-wks-server_2.2.39-1 gpgconf_2.2.39-1 gpgsm_2.2.39-1 gpgv_2.2.39-1 grep_3.7-1 groff-base_1.22.4-8 gzip_1.12-1 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20211215-1 krb5-locales_1.20-1 libacl1_2.3.1-1 libapt-pkg6.0_2.5.3 libarchive-zip-perl_1.68-1 libasan8_12.2.0-3+rpi1 libassuan0_2.5.5-4 libatomic1_12.2.0-3+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1 libbinutils_2.39-6+rpi1 libblkid1_2.38.1-1.1 libbz2-1.0_1.0.8-5+b2 libc-bin_2.35-2+rpi1 libc-dev-bin_2.35-2+rpi1 libc6_2.35-2+rpi1 libc6-dev_2.35-2+rpi1 libcap-ng0_0.8.3-1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_12.2.0-3+rpi1 libcom-err2_1.46.6~rc1-1 libcrypt-dev_1:4.4.28-2 libcrypt1_1:4.4.28-2 libctf-nobfd0_2.39-6+rpi1 libctf0_2.39-6+rpi1 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.264 libdebhelper-perl_13.10.1 libdpkg-perl_1.21.9+rpi1 libelf1_0.187-2+rpi2 libexpat1_2.5.0-1 libext2fs2_1.46.6~rc1-1 libfakeroot_1.29-1 libffi8_3.4.2-4 libfile-stripnondeterminism-perl_1.13.0-1 libgcc-12-dev_12.2.0-3+rpi1 libgcc-s1_12.2.0-3+rpi1 libgcrypt20_1.10.1-2+b2 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-2 libgomp1_12.2.0-3+rpi1 libgpg-error0_1.45-2 libgssapi-krb5-2_1.20-1 libhogweed6_3.8.1-2 libicu72_72.1-2 libidn2-0_2.3.3-1 libisl23_0.25-1 libk5crypto3_1.20-1 libkeyutils1_1.6.3-1 libkrb5-3_1.20-1 libkrb5support0_1.20-1 libksba8_1.6.0-3 libldap-2.5-0_2.5.13+dfsg-2+rpi1 liblz4-1_1.9.4-1+rpi1 liblzma5_5.2.5-2.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmount1_2.38.1-1.1 libmpc3_1.2.1-2 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libncursesw6_6.3+20220423-2 libnettle8_3.8.1-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.1-1 libpam-cap_1:2.44-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam0g_1.5.2-5 libpcre2-8-0_10.40-1+b2 libpcre3_2:8.39-14 libperl5.34_5.34.0-5 libperl5.36_5.36.0-4 libpipeline1_1.5.7-1 libpython3-stdlib_3.10.6-1 libpython3.10-minimal_3.10.8-3 libpython3.10-stdlib_3.10.8-3 libreadline8_8.2-1 libsasl2-2_2.1.28+dfsg-8 libsasl2-modules-db_2.1.28+dfsg-8 libseccomp2_2.5.4-1+rpi1 libselinux1_3.4-1 libsemanage-common_3.4-1 libsemanage2_3.4-1 libsepol1_3.1-1 libsepol2_3.4-2 libsmartcols1_2.38.1-1.1 libsqlite3-0_3.39.4-1 libss2_1.46.6~rc1-1 libssl1.1_1.1.1o-1 libssl3_3.0.5-4 libstdc++-12-dev_12.2.0-3+rpi1 libstdc++6_12.2.0-3+rpi1 libsub-override-perl_0.09-4 libsystemd0_251.5-1+rpi1 libtasn1-6_4.19.0-2 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-4 libubsan1_12.2.0-3+rpi1 libuchardet0_0.0.7-1 libudev1_251.5-1+rpi1 libunistring2_1.0-2 libuuid1_2.38.1-1.1 libxml2_2.9.14+dfsg-1.1 libxxhash0_0.8.1-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_5.19.6-1+rpi1 login_1:4.12.3+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-1 make_4.3-4.1 man-db_2.11.0-1 mawk_1.3.4.20200120-3.1 media-types_8.0.0 mount_2.38.1-1.1 nano_6.4-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.3 passwd_1:4.12.3+dfsg1-1 patch_2.7.6-7 perl_5.36.0-4 perl-base_5.36.0-4 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-4 pinentry-curses_1.2.0-2 po-debconf_1.0.21+nmu1 python3_3.10.6-1 python3-distutils_3.10.8-1 python3-lib2to3_3.10.8-1 python3-minimal_3.10.6-1 python3.10_3.10.8-3 python3.10-minimal_3.10.8-3 raspbian-archive-keyring_20120528.2 readline-common_8.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-lastz-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 sysvinit-utils_3.05-6 tar_1.34+dfsg-1 tzdata_2022d-1 util-linux_2.38.1-1.1 util-linux-extra_2.38.1-1.1 xz-utils_5.2.5-2.1 zlib1g_1:1.2.11.dfsg-4.1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.sqSqk5Pa/trustedkeys.kbx': General error
gpgv: Signature made Fri Nov 18 11:28:32 2022 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./lastz_1.04.22-2.dsc
dpkg-source: info: extracting lastz in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking lastz_1.04.22.orig.tar.gz
dpkg-source: info: unpacking lastz_1.04.22-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying propagate_cflags.patch
dpkg-source: info: applying fix_signed_char.patch
dpkg-source: info: applying spelling.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-12693def-24e0-4b7f-aecc-40e9045c14c7
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package lastz
dpkg-buildpackage: info: source version 1.04.22-2
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --with python3
   dh_auto_clean
	make -j4 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cd src && make clean
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
rm -f *.o
rm -f lastz
rm -f ../test_results/base_test*.*
rm -f lastz_D
rm -f lastz_32
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_clean
 debian/rules binary-arch
dh binary-arch --with python3
   dh_update_autotools_config -a
   dh_autoreconf -a
   dh_auto_configure -a
   dh_auto_build -a
	make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cd src && make lastz lastz_D
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' lastz.c -o lastz.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' infer_scores.c -o infer_scores.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' seeds.c -o seeds.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' pos_table.c -o pos_table.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' quantum.c -o quantum.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' seed_search.c -o seed_search.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' diag_hash.c -o diag_hash.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' chain.c -o chain.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' gapped_extend.c -o gapped_extend.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' tweener.c -o tweener.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' masking.c -o masking.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' segment.c -o segment.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' edit_script.c -o edit_script.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' identity_dist.c -o identity_dist.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' coverage_dist.c -o coverage_dist.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' continuity_dist.c -o continuity_dist.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' output.c -o output.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' gfa.c -o gfa.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' lav.c -o lav.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' axt.c -o axt.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' maf.c -o maf.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' cigar.c -o cigar.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' sam.c -o sam.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' genpaf.c -o genpaf.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' text_align.c -o text_align.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' align_diffs.c -o align_diffs.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' utilities.c -o utilities.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' dna_utilities.c -o dna_utilities.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' sequences.c -o sequences.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' capsule.c -o capsule.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' lastz.c -o lastz_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' infer_scores.c -o infer_scores_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' seeds.c -o seeds_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' pos_table.c -o pos_table_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' quantum.c -o quantum_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' seed_search.c -o seed_search_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' diag_hash.c -o diag_hash_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' chain.c -o chain_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' gapped_extend.c -o gapped_extend_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' tweener.c -o tweener_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' masking.c -o masking_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' segment.c -o segment_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' edit_script.c -o edit_script_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' identity_dist.c -o identity_dist_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' coverage_dist.c -o coverage_dist_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' continuity_dist.c -o continuity_dist_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' output.c -o output_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' gfa.c -o gfa_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' lav.c -o lav_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' axt.c -o axt_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' maf.c -o maf_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' cigar.c -o cigar_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' sam.c -o sam_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' genpaf.c -o genpaf_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' text_align.c -o text_align_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' align_diffs.c -o align_diffs_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' utilities.c -o utilities_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' dna_utilities.c -o dna_utilities_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' sequences.c -o sequences_D.o
gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' capsule.c -o capsule_D.o
gcc lastz.o infer_scores.o seeds.o pos_table.o quantum.o seed_search.o diag_hash.o chain.o gapped_extend.o tweener.o masking.o segment.o edit_script.o identity_dist.o coverage_dist.o continuity_dist.o output.o gfa.o lav.o axt.o maf.o cigar.o sam.o genpaf.o text_align.o align_diffs.o utilities.o dna_utilities.o sequences.o capsule.o -lm -o lastz -Wl,-z,relro -Wl,-z,now
gcc lastz_D.o infer_scores_D.o seeds_D.o pos_table_D.o quantum_D.o seed_search_D.o diag_hash_D.o chain_D.o gapped_extend_D.o tweener_D.o masking_D.o segment_D.o edit_script_D.o identity_dist_D.o coverage_dist_D.o continuity_dist_D.o output_D.o gfa_D.o lav_D.o axt_D.o maf_D.o cigar_D.o sam_D.o genpaf_D.o text_align_D.o align_diffs_D.o utilities_D.o dna_utilities_D.o sequences_D.o capsule_D.o -lm -o lastz_D -Wl,-z,relro -Wl,-z,now
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
/usr/bin/make base_tests
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cd src && /usr/bin/make base_tests
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
SUCCESS: ../test_data/base_test.hits.lav and ../test_results/base_test.hits.lav are equivalent
SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.hsp.lav are equivalent
SUCCESS: ../test_data/base_test.adaptive_k.gfa and ../test_results/base_test.adaptive_k.gfa are equivalent
SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.default.lav are equivalent
SUCCESS: ../test_data/base_test.default.axt and ../test_results/base_test.default.axt are equivalent
SUCCESS: ../test_data/base_test.chained.lav and ../test_results/base_test.chained.lav are equivalent
SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.extended.lav are equivalent
SUCCESS: ../test_data/base_test.interpolated.lav and ../test_results/base_test.interpolated.lav are equivalent
SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.segments.lav are equivalent
SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.stdin2.lav are equivalent
SUCCESS: ../test_data/base_test.pig_cat.lav and ../test_results/base_test.2bit1.lav are equivalent
SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.2bit2.lav are equivalent
SUCCESS: ../test_data/base_test.float.lav and ../test_results/base_test.float.lav are equivalent
SUCCESS: ../test_data/base_test.seeded.lav and ../test_results/base_test.seeded.lav are equivalent
SUCCESS: ../test_data/base_test.hwseeded.lav and ../test_results/base_test.hwseeded.lav are equivalent
SUCCESS: ../test_data/base_test.owseeded.gfa and ../test_results/base_test.owseeded.gfa are equivalent
SUCCESS: ../test_data/base_test.masking.lav and ../test_results/base_test.masking.lav are equivalent
SUCCESS: ../test_data/base_test.subrange.lav and ../test_results/base_test.subrange.lav are equivalent
SUCCESS: ../test_data/base_test.mask.lav and ../test_results/base_test.mask.lav are equivalent
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
/usr/bin/make test
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cd src && /usr/bin/make test
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
/usr/bin/make clean_test
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cd src && /usr/bin/make clean_tests
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
rm -f ../test_results/base_test*.*
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   create-stamp debian/debhelper-build-stamp
   dh_prep -a
   dh_auto_install -a
	make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cd src && make install
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
install --strip-program=true -d      /<<PKGBUILDDIR>>/debian/.debhelper/generated/_source/home/lastz-distrib/bin
install: WARNING: ignoring --strip-program option as -s option was not specified
install --strip-program=true lastz   /<<PKGBUILDDIR>>/debian/.debhelper/generated/_source/home/lastz-distrib/bin
install: WARNING: ignoring --strip-program option as -s option was not specified
install --strip-program=true lastz_D /<<PKGBUILDDIR>>/debian/.debhelper/generated/_source/home/lastz-distrib/bin
install: WARNING: ignoring --strip-program option as -s option was not specified
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_install -a
   dh_installdocs -a
   dh_installchangelogs -a
   dh_installman -a
   dh_python3 -a
E: dh_python3 dh_python3:189: no package to act on (python3-foo or one with ${python3:Depends} in Depends)
   dh_perl -a
   dh_link -a
   dh_strip_nondeterminism -a
   dh_compress -a
   dh_fixperms -a
   dh_missing -a
   dh_dwz -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/lastz/usr/bin/lastz debian/lastz/usr/bin/lastz_D were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
   dh_installdeb -a
   dh_gencontrol -a
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package 'lastz' in '../lastz_1.04.22-2_armhf.deb'.
dpkg-deb: building package 'lastz-dbgsym' in '../lastz-dbgsym_1.04.22-2_armhf.deb'.
 dpkg-genbuildinfo --build=any -O../lastz_1.04.22-2_armhf.buildinfo
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> -O../lastz_1.04.22-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2022-11-20T06:26:50Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


lastz_1.04.22-2_armhf.changes:
------------------------------

Format: 1.8
Date: Fri, 18 Nov 2022 12:25:49 +0100
Source: lastz
Binary: lastz lastz-dbgsym
Architecture: armhf
Version: 1.04.22-2
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 lastz      - pairwise aligning DNA sequences
Changes:
 lastz (1.04.22-2) unstable; urgency=medium
 .
   * Fix watch file
Checksums-Sha1:
 e15ee93088bf16c1efcfefcf5b780473a0f57c2e 1059396 lastz-dbgsym_1.04.22-2_armhf.deb
 ea53bd8b7680e95a55cc91212bc0b4bbaddd8df8 5407 lastz_1.04.22-2_armhf.buildinfo
 8f798de820118c7795050ec7da62ae03d1bbd55a 450144 lastz_1.04.22-2_armhf.deb
Checksums-Sha256:
 3d4a114472e3f799ddabcbe62665e6904e9fc4d41f85b7411c57c508777aecfe 1059396 lastz-dbgsym_1.04.22-2_armhf.deb
 5234ee5ebba3d2de779bc90b12f469bcdef10202eee9198b9e128f926a64bb1d 5407 lastz_1.04.22-2_armhf.buildinfo
 340643fd42a129234945757725a1465f60fe8ae1bb8cc5c066d03054856b0c4e 450144 lastz_1.04.22-2_armhf.deb
Files:
 510f114463a256fecfee494b2fa3172f 1059396 debug optional lastz-dbgsym_1.04.22-2_armhf.deb
 fe983a35441739dbd29b8be390d735c9 5407 science optional lastz_1.04.22-2_armhf.buildinfo
 8004f8f8f6b787fa8e9dc213270355c1 450144 science optional lastz_1.04.22-2_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


lastz-dbgsym_1.04.22-2_armhf.deb
--------------------------------

 new Debian package, version 2.0.
 size 1059396 bytes: control archive=644 bytes.
     408 bytes,    12 lines      control              
     297 bytes,     3 lines      md5sums              
 Package: lastz-dbgsym
 Source: lastz
 Version: 1.04.22-2
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1130
 Depends: lastz (= 1.04.22-2)
 Section: debug
 Priority: optional
 Description: debug symbols for lastz
 Build-Ids: 21ae82e76e50573d4c6edddaa940692c1fb1f2fc 42f0059af2a9f1540a54b0cbd9d1372aedc734ad

drwxr-xr-x root/root         0 2022-11-18 11:25 ./
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/lib/
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/lib/debug/
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/lib/debug/.build-id/21/
-rw-r--r-- root/root    555088 2022-11-18 11:25 ./usr/lib/debug/.build-id/21/ae82e76e50573d4c6edddaa940692c1fb1f2fc.debug
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/lib/debug/.build-id/42/
-rw-r--r-- root/root    553412 2022-11-18 11:25 ./usr/lib/debug/.build-id/42/f0059af2a9f1540a54b0cbd9d1372aedc734ad.debug
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root     33728 2022-11-18 11:25 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/lastz.debug
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/share/
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/share/doc/
lrwxrwxrwx root/root         0 2022-11-18 11:25 ./usr/share/doc/lastz-dbgsym -> lastz


lastz_1.04.22-2_armhf.deb
-------------------------

 new Debian package, version 2.0.
 size 450144 bytes: control archive=1568 bytes.
     549 bytes,    14 lines      control              
    2477 bytes,    31 lines      md5sums              
 Package: lastz
 Version: 1.04.22-2
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 1456
 Depends: libc6 (>= 2.34)
 Section: science
 Priority: optional
 Homepage: https://github.com/lastz/lastz
 Description: pairwise aligning DNA sequences
  LASTZ is a drop-in replacement for BLASTZ, and is backward compatible with
  BLASTZ’s command-line syntax. That is, it supports all of BLASTZ’s options
  but also has additional ones, and may produce slightly different alignment
  results.

drwxr-xr-x root/root         0 2022-11-18 11:25 ./
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/bin/
-rwxr-xr-x root/root    462000 2022-11-18 11:25 ./usr/bin/lastz
-rwxr-xr-x root/root    462140 2022-11-18 11:25 ./usr/bin/lastz_D
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/share/
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/share/doc/
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/share/doc/lastz/
-rw-r--r-- root/root       318 2022-11-18 11:25 ./usr/share/doc/lastz/README.test
-rw-r--r-- root/root       708 2022-11-18 11:25 ./usr/share/doc/lastz/changelog.Debian.gz
-rw-r--r-- root/root      1340 2022-11-18 11:25 ./usr/share/doc/lastz/copyright
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/share/doc/lastz/docs/
-rw-r--r-- root/root        26 2022-08-07 20:18 ./usr/share/doc/lastz/docs/_config.yml
-rw-r--r-- root/root     35936 2022-08-07 20:18 ./usr/share/doc/lastz/docs/hsx_format.html
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/share/doc/lastz/docs/images/
-rw-r--r-- root/root      5675 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/after_chaining.png
-rw-r--r-- root/root      6403 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/after_interpolation.png
-rw-r--r-- root/root      5769 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/aglobin_chained.png
-rw-r--r-- root/root     10222 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/aglobin_closeup_gapped.png
-rw-r--r-- root/root      8640 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/aglobin_closeup_hsps.png
-rw-r--r-- root/root      9383 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/aglobin_closeup_seeds.png
-rw-r--r-- root/root      6075 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/aglobin_hsps.png
-rw-r--r-- root/root      7311 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/aglobin_unchained.png
-rw-r--r-- root/root     11778 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/anchors_and_alignment.png
-rw-r--r-- root/root      9054 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/before_chaining.png
-rw-r--r-- root/root      5240 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/before_interpolation.png
-rw-r--r-- root/root      7679 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/human_vs_chicken.png
-rw-r--r-- root/root      9001 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/human_vs_chicken_full.png
-rw-r--r-- root/root     12005 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/seeds_and_hsps.png
-rw-r--r-- root/root     10707 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/seq_vs_same.png
-rw-r--r-- root/root      8896 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/seq_vs_same_notrivial.png
-rw-r--r-- root/root      8897 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/seq_vs_self.png
-rw-r--r-- root/root      6753 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/seq_vs_self_no_mirror.png
-rw-r--r-- root/root     12277 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/word_count_table.png
-rw-r--r-- root/root      8275 2022-08-07 20:18 ./usr/share/doc/lastz/docs/images/ydrop.png
-rw-r--r-- root/root    313644 2022-08-07 20:18 ./usr/share/doc/lastz/docs/index.html
-rw-r--r-- root/root     12527 2022-08-07 20:18 ./usr/share/doc/lastz/docs/lav_format.html
-rw-r--r-- root/root       388 2022-11-18 11:25 ./usr/share/doc/lastz/run-unit-test
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/share/man/
drwxr-xr-x root/root         0 2022-11-18 11:25 ./usr/share/man/man1/
-rw-r--r-- root/root      2212 2022-11-18 11:25 ./usr/share/man/man1/lastz.1.gz
lrwxrwxrwx root/root         0 2022-11-18 11:25 ./usr/share/man/man1/lastz_D.1.gz -> lastz.1.gz


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 30040
Build-Time: 225
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 451
Job: lastz_1.04.22-2
Machine Architecture: armhf
Package: lastz
Package-Time: 735
Source-Version: 1.04.22-2
Space: 30040
Status: successful
Version: 1.04.22-2
--------------------------------------------------------------------------------
Finished at 2022-11-20T06:26:50Z
Build needed 00:12:15, 30040k disc space