htseq →
2.0.5-1 →
armhf → 2024-01-17 06:46:56
sbuild (Debian sbuild) 0.85.0 (04 January 2023) on test2023
+==============================================================================+
| htseq 2.0.5-1 (armhf) Wed, 17 Jan 2024 06:41:49 +0000 |
+==============================================================================+
Package: htseq
Version: 2.0.5-1
Source Version: 2.0.5-1
Distribution: trixie-staging
Machine Architecture: arm64
Host Architecture: armhf
Build Architecture: armhf
Build Type: any
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/trixie-staging-armhf-sbuild-0d264962-a78a-4fcc-b466-710860d6ed75' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/htseq-YtLqGO/resolver-bFlfIM' with '<<RESOLVERDIR>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private trixie-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private trixie-staging/main Sources [14.4 MB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf Packages [15.0 MB]
Fetched 29.4 MB in 5s (5592 kB/s)
Reading package lists...
W: http://172.17.4.1/private/dists/trixie-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'htseq' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/htseq.git
Please use:
git clone https://salsa.debian.org/med-team/htseq.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 36.8 MB of source archives.
Get:1 http://172.17.4.1/private trixie-staging/main htseq 2.0.5-1 (dsc) [2164 B]
Get:2 http://172.17.4.1/private trixie-staging/main htseq 2.0.5-1 (tar) [36.8 MB]
Get:3 http://172.17.4.1/private trixie-staging/main htseq 2.0.5-1 (diff) [11.2 kB]
Fetched 36.8 MB in 4s (8801 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/htseq-YtLqGO/htseq-2.0.5' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/htseq-YtLqGO' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: 2to3, debhelper-compat (= 13), dh-sequence-python3, python3-debian, python3-setuptools, python3-all-dev, python3-numpy, python3-matplotlib, python3-pysam, swig, cython3, build-essential, fakeroot
Filtered Build-Depends: 2to3, debhelper-compat (= 13), dh-sequence-python3, python3-debian, python3-setuptools, python3-all-dev, python3-numpy, python3-matplotlib, python3-pysam, swig, cython3, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [762 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [794 B]
Fetched 2165 B in 0s (0 B/s)
Reading package lists...
Reading package lists...
Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
2to3 autoconf automake autopoint autotools-dev blt bsdextrautils bsdutils
cpp-13 cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz
file fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx g++-13
gcc-13 gcc-13-base gettext gettext-base groff-base intltool-debian
libarchive-zip-perl libasan8 libatomic1 libblas3 libblkid1 libbrotli1
libbsd0 libcc1-0 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1
libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1
libfreetype6 libfribidi0 libgcc-13-dev libgcc-s1 libgfortran5 libglib2.0-0
libgomp1 libgraphite2-3 libharfbuzz0b libhts3 libhtscodecs2 libicu72
libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui
libjs-sphinxdoc libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblerc4
libmagic-mgc libmagic1 libmount1 libnghttp2-14 libopenjp2-7 libpipeline1
libpng16-16 libpsl5 libpython3-all-dev libpython3-dev libpython3-stdlib
libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib
libqhull-r8.0 libraqm0 librtmp1 libsharpyuv0 libsmartcols1 libssh2-1
libstdc++-13-dev libstdc++6 libsub-override-perl libtcl8.6 libtiff6 libtk8.6
libtool libubsan1 libuchardet0 libuuid1 libwebp7 libwebpdemux2 libwebpmux3
libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxrender1 libxslt1.1 libxss1 m4 man-db media-types mount netbase
po-debconf python-matplotlib-data python3 python3-all python3-all-dev
python3-appdirs python3-attr python3-brotli python3-chardet
python3-contourpy python3-cycler python3-dateutil python3-debian
python3-decorator python3-dev python3-distutils python3-fonttools python3-fs
python3-kiwisolver python3-lib2to3 python3-lxml python3-lz4
python3-matplotlib python3-minimal python3-mpmath python3-numpy
python3-packaging python3-pil python3-pil.imagetk python3-pkg-resources
python3-pyparsing python3-pysam python3-scipy python3-setuptools python3-six
python3-sympy python3-tk python3-tz python3-ufolib2 python3.11
python3.11-dev python3.11-minimal sensible-utils swig swig4.0 tk8.6-blt2.5
unicode-data util-linux x11-common zlib1g zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc blt-demo gcc-13-locales
cpp-13-doc cython-doc dh-make flit python3-build python3-installer
python3-wheel gcc-13-doc gettext-doc libasprintf-dev libgettextpo-dev groff
low-memory-monitor libjs-jquery-ui-docs liblcms2-utils cryptsetup-bin
libstdc++-13-doc tcl8.6 tk8.6 libtool-doc gfortran | fortran95-compiler
gcj-jdk m4-doc apparmor less www-browser nfs-common libmail-box-perl
python3-doc python3-venv python-attr-doc python-cycler-doc python-lxml-doc
cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0
inkscape ipython3 librsvg2-common python3-cairocffi python3-gi
python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado
texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2
gfortran python3-pytest python-pil-doc python-pyparsing-doc python-scipy-doc
python-setuptools-doc texlive-fonts-extra python-sympy-doc tix
python3-tk-dbg python3.11-venv python3.11-doc binfmt-support swig-doc
swig-examples swig4.0-examples swig4.0-doc dosfstools kbd util-linux-extra
util-linux-locales
Recommended packages:
curl | wget | lynx ca-certificates libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs javascript-common publicsuffix libltdl-dev
uuid-runtime libmail-sendmail-perl python3-apt zstd python3-bs4
python3-cssselect python3-html5lib python3-olefile isympy-common
The following NEW packages will be installed:
2to3 autoconf automake autopoint autotools-dev blt bsdextrautils cython3
debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file
fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libblas3
libbrotli1 libbsd0 libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1
libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1
libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgraphite2-3
libharfbuzz0b libhts3 libhtscodecs2 libicu72 libimagequant0 libjbig0
libjpeg62-turbo libjs-jquery libjs-jquery-ui libjs-sphinxdoc
libjs-underscore liblapack3 liblbfgsb0 liblcms2-2 liblerc4 libmagic-mgc
libmagic1 libnghttp2-14 libopenjp2-7 libpipeline1 libpng16-16 libpsl5
libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.11
libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libqhull-r8.0
libraqm0 librtmp1 libsharpyuv0 libssh2-1 libsub-override-perl libtcl8.6
libtiff6 libtk8.6 libtool libuchardet0 libwebp7 libwebpdemux2 libwebpmux3
libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxrender1 libxslt1.1 libxss1 m4 man-db media-types netbase po-debconf
python-matplotlib-data python3 python3-all python3-all-dev python3-appdirs
python3-attr python3-brotli python3-chardet python3-contourpy python3-cycler
python3-dateutil python3-debian python3-decorator python3-dev
python3-distutils python3-fonttools python3-fs python3-kiwisolver
python3-lib2to3 python3-lxml python3-lz4 python3-matplotlib python3-minimal
python3-mpmath python3-numpy python3-packaging python3-pil
python3-pil.imagetk python3-pkg-resources python3-pyparsing python3-pysam
python3-scipy python3-setuptools python3-six python3-sympy python3-tk
python3-tz python3-ufolib2 python3.11 python3.11-dev python3.11-minimal
sbuild-build-depends-main-dummy sensible-utils swig swig4.0 tk8.6-blt2.5
unicode-data x11-common zlib1g-dev
The following packages will be upgraded:
bsdutils cpp-13 g++-13 gcc-13 gcc-13-base libasan8 libatomic1 libblkid1
libcc1-0 libgcc-13-dev libgcc-s1 libgomp1 libmount1 libsmartcols1
libstdc++-13-dev libstdc++6 libubsan1 libuuid1 mount util-linux zlib1g
21 upgraded, 147 newly installed, 0 to remove and 23 not upgraded.
Need to get 138 MB of archives.
After this operation, 417 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [944 B]
Get:2 http://172.17.4.1/private trixie-staging/main armhf bsdutils armhf 1:2.39.3-6 [87.1 kB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf util-linux armhf 2.39.3-6 [1113 kB]
Get:4 http://172.17.4.1/private trixie-staging/main armhf mount armhf 2.39.3-6 [134 kB]
Get:5 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-minimal armhf 3.11.7-2 [801 kB]
Get:6 http://172.17.4.1/private trixie-staging/main armhf libcc1-0 armhf 13.2.0-9+rpi1 [35.4 kB]
Get:7 http://172.17.4.1/private trixie-staging/main armhf gcc-13-base armhf 13.2.0-9+rpi1 [41.7 kB]
Get:8 http://172.17.4.1/private trixie-staging/main armhf libgcc-s1 armhf 13.2.0-9+rpi1 [36.2 kB]
Get:9 http://172.17.4.1/private trixie-staging/main armhf libgomp1 armhf 13.2.0-9+rpi1 [104 kB]
Get:10 http://172.17.4.1/private trixie-staging/main armhf libatomic1 armhf 13.2.0-9+rpi1 [8448 B]
Get:11 http://172.17.4.1/private trixie-staging/main armhf libasan8 armhf 13.2.0-9+rpi1 [2391 kB]
Get:12 http://172.17.4.1/private trixie-staging/main armhf libubsan1 armhf 13.2.0-9+rpi1 [964 kB]
Get:13 http://172.17.4.1/private trixie-staging/main armhf g++-13 armhf 13.2.0-9+rpi1 [8138 kB]
Get:14 http://172.17.4.1/private trixie-staging/main armhf libstdc++-13-dev armhf 13.2.0-9+rpi1 [2209 kB]
Get:15 http://172.17.4.1/private trixie-staging/main armhf libgcc-13-dev armhf 13.2.0-9+rpi1 [763 kB]
Get:16 http://172.17.4.1/private trixie-staging/main armhf gcc-13 armhf 13.2.0-9+rpi1 [14.7 MB]
Get:17 http://172.17.4.1/private trixie-staging/main armhf cpp-13 armhf 13.2.0-9+rpi1 [7372 kB]
Get:18 http://172.17.4.1/private trixie-staging/main armhf libstdc++6 armhf 13.2.0-9+rpi1 [578 kB]
Get:19 http://172.17.4.1/private trixie-staging/main armhf zlib1g armhf 1:1.3.dfsg-3 [74.3 kB]
Get:20 http://172.17.4.1/private trixie-staging/main armhf libexpat1 armhf 2.5.0-2 [76.8 kB]
Get:21 http://172.17.4.1/private trixie-staging/main armhf python3.11-minimal armhf 3.11.7-2 [1677 kB]
Get:22 http://172.17.4.1/private trixie-staging/main armhf python3-minimal armhf 3.11.4-5 [26.2 kB]
Get:23 http://172.17.4.1/private trixie-staging/main armhf media-types all 10.1.0 [26.9 kB]
Get:24 http://172.17.4.1/private trixie-staging/main armhf netbase all 6.4 [12.8 kB]
Get:25 http://172.17.4.1/private trixie-staging/main armhf libuuid1 armhf 2.39.3-6 [28.3 kB]
Get:26 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-stdlib armhf 3.11.7-2 [1694 kB]
Get:27 http://172.17.4.1/private trixie-staging/main armhf python3.11 armhf 3.11.7-2 [590 kB]
Get:28 http://172.17.4.1/private trixie-staging/main armhf libpython3-stdlib armhf 3.11.4-5 [9200 B]
Get:29 http://172.17.4.1/private trixie-staging/main armhf python3 armhf 3.11.4-5 [26.2 kB]
Get:30 http://172.17.4.1/private trixie-staging/main armhf libblkid1 armhf 2.39.3-6 [145 kB]
Get:31 http://172.17.4.1/private trixie-staging/main armhf libmount1 armhf 2.39.3-6 [168 kB]
Get:32 http://172.17.4.1/private trixie-staging/main armhf libsmartcols1 armhf 2.39.3-6 [102 kB]
Get:33 http://172.17.4.1/private trixie-staging/main armhf libuchardet0 armhf 0.0.8-1 [65.5 kB]
Get:34 http://172.17.4.1/private trixie-staging/main armhf groff-base armhf 1.23.0-3 [1033 kB]
Get:35 http://172.17.4.1/private trixie-staging/main armhf bsdextrautils armhf 2.39.3-6 [81.4 kB]
Get:36 http://172.17.4.1/private trixie-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:37 http://172.17.4.1/private trixie-staging/main armhf man-db armhf 2.12.0-3 [1358 kB]
Get:38 http://172.17.4.1/private trixie-staging/main armhf sensible-utils all 0.0.20 [19.3 kB]
Get:39 http://172.17.4.1/private trixie-staging/main armhf libmagic-mgc armhf 1:5.45-2 [314 kB]
Get:40 http://172.17.4.1/private trixie-staging/main armhf libmagic1 armhf 1:5.45-2 [96.1 kB]
Get:41 http://172.17.4.1/private trixie-staging/main armhf file armhf 1:5.45-2 [41.6 kB]
Get:42 http://172.17.4.1/private trixie-staging/main armhf gettext-base armhf 0.21-14 [157 kB]
Get:43 http://172.17.4.1/private trixie-staging/main armhf python3-lib2to3 all 3.11.5-1 [77.5 kB]
Get:44 http://172.17.4.1/private trixie-staging/main armhf 2to3 all 3.11.4-5 [10.2 kB]
Get:45 http://172.17.4.1/private trixie-staging/main armhf m4 armhf 1.4.19-4 [256 kB]
Get:46 http://172.17.4.1/private trixie-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:47 http://172.17.4.1/private trixie-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:48 http://172.17.4.1/private trixie-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:49 http://172.17.4.1/private trixie-staging/main armhf autopoint all 0.21-14 [496 kB]
Get:50 http://172.17.4.1/private trixie-staging/main armhf libtcl8.6 armhf 8.6.13+dfsg-2 [904 kB]
Get:51 http://172.17.4.1/private trixie-staging/main armhf libbrotli1 armhf 1.1.0-2 [280 kB]
Get:52 http://172.17.4.1/private trixie-staging/main armhf libpng16-16 armhf 1.6.40-3 [259 kB]
Get:53 http://172.17.4.1/private trixie-staging/main armhf libfreetype6 armhf 2.13.2+dfsg-1 [366 kB]
Get:54 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-mono all 2.37-8 [489 kB]
Get:55 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-core all 2.37-8 [840 kB]
Get:56 http://172.17.4.1/private trixie-staging/main armhf fontconfig-config armhf 2.14.2-6 [316 kB]
Get:57 http://172.17.4.1/private trixie-staging/main armhf libfontconfig1 armhf 2.14.2-6 [367 kB]
Get:58 http://172.17.4.1/private trixie-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:59 http://172.17.4.1/private trixie-staging/main armhf libbsd0 armhf 0.11.8-1 [120 kB]
Get:60 http://172.17.4.1/private trixie-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:61 http://172.17.4.1/private trixie-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:62 http://172.17.4.1/private trixie-staging/main armhf libx11-data all 2:1.8.7-1 [328 kB]
Get:63 http://172.17.4.1/private trixie-staging/main armhf libx11-6 armhf 2:1.8.7-1 [729 kB]
Get:64 http://172.17.4.1/private trixie-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:65 http://172.17.4.1/private trixie-staging/main armhf libxft2 armhf 2.3.6-1 [53.7 kB]
Get:66 http://172.17.4.1/private trixie-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:67 http://172.17.4.1/private trixie-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:68 http://172.17.4.1/private trixie-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:69 http://172.17.4.1/private trixie-staging/main armhf libtk8.6 armhf 8.6.13-2 [680 kB]
Get:70 http://172.17.4.1/private trixie-staging/main armhf tk8.6-blt2.5 armhf 2.5.3+dfsg-7 [470 kB]
Get:71 http://172.17.4.1/private trixie-staging/main armhf blt armhf 2.5.3+dfsg-7 [6024 B]
Get:72 http://172.17.4.1/private trixie-staging/main armhf cython3 armhf 3.0.7-2 [3440 kB]
Get:73 http://172.17.4.1/private trixie-staging/main armhf libdebhelper-perl all 13.11.9 [82.3 kB]
Get:74 http://172.17.4.1/private trixie-staging/main armhf libtool all 2.4.7-7 [517 kB]
Get:75 http://172.17.4.1/private trixie-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:76 http://172.17.4.1/private trixie-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:77 http://172.17.4.1/private trixie-staging/main armhf libsub-override-perl all 0.10-1 [10.6 kB]
Get:78 http://172.17.4.1/private trixie-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:79 http://172.17.4.1/private trixie-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:80 http://172.17.4.1/private trixie-staging/main armhf libelf1 armhf 0.188-2.1+rpi1 [171 kB]
Get:81 http://172.17.4.1/private trixie-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:82 http://172.17.4.1/private trixie-staging/main armhf libicu72 armhf 72.1-4 [9009 kB]
Get:83 http://172.17.4.1/private trixie-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.3 [571 kB]
Get:84 http://172.17.4.1/private trixie-staging/main armhf gettext armhf 0.21-14 [1203 kB]
Get:85 http://172.17.4.1/private trixie-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:86 http://172.17.4.1/private trixie-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:87 http://172.17.4.1/private trixie-staging/main armhf debhelper all 13.11.9 [956 kB]
Get:88 http://172.17.4.1/private trixie-staging/main armhf python3-distutils all 3.11.5-1 [131 kB]
Get:89 http://172.17.4.1/private trixie-staging/main armhf python3-pkg-resources all 68.1.2-2 [241 kB]
Get:90 http://172.17.4.1/private trixie-staging/main armhf python3-setuptools all 68.1.2-2 [468 kB]
Get:91 http://172.17.4.1/private trixie-staging/main armhf dh-python all 6.20231223 [108 kB]
Get:92 http://172.17.4.1/private trixie-staging/main armhf fonts-lyx all 2.3.7-1 [186 kB]
Get:93 http://172.17.4.1/private trixie-staging/main armhf libblas3 armhf 3.11.0-2 [100.0 kB]
Get:94 http://172.17.4.1/private trixie-staging/main armhf libnghttp2-14 armhf 1.58.0-1 [61.7 kB]
Get:95 http://172.17.4.1/private trixie-staging/main armhf libpsl5 armhf 0.21.2-1+b1 [57.8 kB]
Get:96 http://172.17.4.1/private trixie-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:97 http://172.17.4.1/private trixie-staging/main armhf libssh2-1 armhf 1.11.0-4 [195 kB]
Get:98 http://172.17.4.1/private trixie-staging/main armhf libcurl3-gnutls armhf 8.5.0-2+rpi1 [372 kB]
Ign:98 http://172.17.4.1/private trixie-staging/main armhf libcurl3-gnutls armhf 8.5.0-2+rpi1
Get:99 http://172.17.4.1/private trixie-staging/main armhf libdeflate0 armhf 1.18-1 [38.3 kB]
Get:100 http://172.17.4.1/private trixie-staging/main armhf libexpat1-dev armhf 2.5.0-2 [130 kB]
Get:101 http://172.17.4.1/private trixie-staging/main armhf libfribidi0 armhf 1.0.13-3 [69.9 kB]
Get:102 http://172.17.4.1/private trixie-staging/main armhf libgfortran5 armhf 13.2.0-9+rpi1 [247 kB]
Get:103 http://172.17.4.1/private trixie-staging/main armhf libglib2.0-0 armhf 2.78.3-1 [1256 kB]
Get:104 http://172.17.4.1/private trixie-staging/main armhf libgraphite2-3 armhf 1.3.14-2 [62.8 kB]
Get:105 http://172.17.4.1/private trixie-staging/main armhf libharfbuzz0b armhf 8.0.1-1 [2098 kB]
Get:106 http://172.17.4.1/private trixie-staging/main armhf libhtscodecs2 armhf 1.6.0-1 [60.3 kB]
Get:107 http://172.17.4.1/private trixie-staging/main armhf libhts3 armhf 1.18+ds-1 [380 kB]
Get:108 http://172.17.4.1/private trixie-staging/main armhf libimagequant0 armhf 2.18.0-1 [30.5 kB]
Get:109 http://172.17.4.1/private trixie-staging/main armhf libjbig0 armhf 2.1-6.1 [27.0 kB]
Get:110 http://172.17.4.1/private trixie-staging/main armhf libjpeg62-turbo armhf 1:2.1.5-2 [143 kB]
Get:111 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:112 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get:113 http://172.17.4.1/private trixie-staging/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:114 http://172.17.4.1/private trixie-staging/main armhf libjs-sphinxdoc all 7.2.6-3 [149 kB]
Get:115 http://172.17.4.1/private trixie-staging/main armhf liblapack3 armhf 3.11.0-2 [1624 kB]
Get:116 http://172.17.4.1/private trixie-staging/main armhf liblbfgsb0 armhf 3.0+dfsg.4-1 [24.4 kB]
Get:117 http://172.17.4.1/private trixie-staging/main armhf liblcms2-2 armhf 2.14-2 [124 kB]
Get:118 http://172.17.4.1/private trixie-staging/main armhf liblerc4 armhf 4.0.0+ds-4 [132 kB]
Get:119 http://172.17.4.1/private trixie-staging/main armhf libopenjp2-7 armhf 2.5.0-2 [164 kB]
Get:120 http://172.17.4.1/private trixie-staging/main armhf libpython3.11 armhf 3.11.7-2 [1670 kB]
Get:121 http://172.17.4.1/private trixie-staging/main armhf zlib1g-dev armhf 1:1.3.dfsg-3 [903 kB]
Get:122 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-dev armhf 3.11.7-2 [3287 kB]
Get:123 http://172.17.4.1/private trixie-staging/main armhf libpython3-dev armhf 3.11.4-5 [9432 B]
Get:124 http://172.17.4.1/private trixie-staging/main armhf libpython3-all-dev armhf 3.11.4-5 [1068 B]
Get:125 http://172.17.4.1/private trixie-staging/main armhf libqhull-r8.0 armhf 2020.2-6 [216 kB]
Get:126 http://172.17.4.1/private trixie-staging/main armhf libraqm0 armhf 0.10.1-1 [11.7 kB]
Get:127 http://172.17.4.1/private trixie-staging/main armhf libsharpyuv0 armhf 1.3.2-0.3 [106 kB]
Get:128 http://172.17.4.1/private trixie-staging/main armhf libwebp7 armhf 1.3.2-0.3 [261 kB]
Get:129 http://172.17.4.1/private trixie-staging/main armhf libtiff6 armhf 4.5.1+git230720-3 [299 kB]
Get:130 http://172.17.4.1/private trixie-staging/main armhf libwebpdemux2 armhf 1.3.2-0.3 [106 kB]
Get:131 http://172.17.4.1/private trixie-staging/main armhf libwebpmux3 armhf 1.3.2-0.3 [116 kB]
Get:132 http://172.17.4.1/private trixie-staging/main armhf libxslt1.1 armhf 1.1.35-1 [221 kB]
Get:133 http://172.17.4.1/private trixie-staging/main armhf python-matplotlib-data all 3.6.3-1 [2744 kB]
Get:134 http://172.17.4.1/private trixie-staging/main armhf python3-all armhf 3.11.4-5 [1060 B]
Get:135 http://172.17.4.1/private trixie-staging/main armhf python3.11-dev armhf 3.11.7-2 [508 kB]
Get:136 http://172.17.4.1/private trixie-staging/main armhf python3-dev armhf 3.11.4-5 [26.2 kB]
Get:137 http://172.17.4.1/private trixie-staging/main armhf python3-all-dev armhf 3.11.4-5 [1068 B]
Get:138 http://172.17.4.1/private trixie-staging/main armhf python3-appdirs all 1.4.4-4 [12.5 kB]
Get:139 http://172.17.4.1/private trixie-staging/main armhf python3-attr all 23.2.0-1 [65.5 kB]
Get:140 http://172.17.4.1/private trixie-staging/main armhf python3-brotli armhf 1.1.0-2 [290 kB]
Get:141 http://172.17.4.1/private trixie-staging/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB]
Get:142 http://172.17.4.1/private trixie-staging/main armhf python3-numpy armhf 1:1.24.2-2 [3164 kB]
Get:143 http://172.17.4.1/private trixie-staging/main armhf python3-contourpy armhf 1.0.7-1 [141 kB]
Get:144 http://172.17.4.1/private trixie-staging/main armhf python3-cycler all 0.11.0-1 [8020 B]
Get:145 http://172.17.4.1/private trixie-staging/main armhf python3-six all 1.16.0-4 [17.5 kB]
Get:146 http://172.17.4.1/private trixie-staging/main armhf python3-dateutil all 2.8.2-3 [78.4 kB]
Get:147 http://172.17.4.1/private trixie-staging/main armhf python3-debian all 0.1.49 [115 kB]
Get:148 http://172.17.4.1/private trixie-staging/main armhf python3-decorator all 5.1.1-5 [15.1 kB]
Get:149 http://172.17.4.1/private trixie-staging/main armhf python3-scipy armhf 1.10.1-5+rpi1 [13.6 MB]
Get:150 http://172.17.4.1/private trixie-staging/main armhf python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB]
Get:151 http://172.17.4.1/private trixie-staging/main armhf python3-mpmath all 1.2.1-2 [418 kB]
Get:152 http://172.17.4.1/private trixie-staging/main armhf python3-sympy all 1.12-6 [3868 kB]
Get:153 http://172.17.4.1/private trixie-staging/main armhf python3-tz all 2023.3.post1-2 [30.9 kB]
Get:154 http://172.17.4.1/private trixie-staging/main armhf python3-fs all 2.4.16-3 [95.3 kB]
Get:155 http://172.17.4.1/private trixie-staging/main armhf python3-lxml armhf 4.9.4-1 [1042 kB]
Get:156 http://172.17.4.1/private trixie-staging/main armhf python3-lz4 armhf 4.0.2+dfsg-1+b1 [23.9 kB]
Get:157 http://172.17.4.1/private trixie-staging/main armhf unicode-data all 15.1.0-1 [8547 kB]
Get:158 http://172.17.4.1/private trixie-staging/main armhf python3-fonttools armhf 4.46.0-1 [1271 kB]
Get:159 http://172.17.4.1/private trixie-staging/main armhf python3-kiwisolver armhf 1.4.4-1 [52.3 kB]
Get:160 http://172.17.4.1/private trixie-staging/main armhf python3-pil armhf 10.1.0-1 [451 kB]
Get:161 http://172.17.4.1/private trixie-staging/main armhf python3-tk armhf 3.11.5-1 [95.9 kB]
Get:162 http://172.17.4.1/private trixie-staging/main armhf python3-pil.imagetk armhf 10.1.0-1 [76.1 kB]
Get:163 http://172.17.4.1/private trixie-staging/main armhf python3-pyparsing all 3.1.1-1 [145 kB]
Get:164 http://172.17.4.1/private trixie-staging/main armhf python3-packaging all 23.2-1 [44.8 kB]
Get:165 http://172.17.4.1/private trixie-staging/main armhf python3-matplotlib armhf 3.6.3-1 [7453 kB]
Get:166 http://172.17.4.1/private trixie-staging/main armhf python3-pysam armhf 0.22.0+ds-1+rpi1 [2903 kB]
Get:167 http://172.17.4.1/private trixie-staging/main armhf swig4.0 armhf 4.1.0-0.3 [1220 kB]
Get:168 http://172.17.4.1/private trixie-staging/main armhf swig all 4.1.0-0.3 [321 kB]
Get:98 http://172.17.4.1/private trixie-staging/main armhf libcurl3-gnutls armhf 8.5.0-2+rpi1 [372 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 138 MB in 18s (7825 kB/s)
(Reading database ... 12735 files and directories currently installed.)
Preparing to unpack .../bsdutils_1%3a2.39.3-6_armhf.deb ...
Unpacking bsdutils (1:2.39.3-6) over (1:2.39.3-2) ...
Setting up bsdutils (1:2.39.3-6) ...
(Reading database ... 12735 files and directories currently installed.)
Preparing to unpack .../util-linux_2.39.3-6_armhf.deb ...
Unpacking util-linux (2.39.3-6) over (2.39.3-2) ...
Setting up util-linux (2.39.3-6) ...
(Reading database ... 12735 files and directories currently installed.)
Preparing to unpack .../mount_2.39.3-6_armhf.deb ...
Unpacking mount (2.39.3-6) over (2.39.3-2) ...
Selecting previously unselected package libpython3.11-minimal:armhf.
Preparing to unpack .../libpython3.11-minimal_3.11.7-2_armhf.deb ...
Unpacking libpython3.11-minimal:armhf (3.11.7-2) ...
Preparing to unpack .../libcc1-0_13.2.0-9+rpi1_armhf.deb ...
Unpacking libcc1-0:armhf (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Preparing to unpack .../gcc-13-base_13.2.0-9+rpi1_armhf.deb ...
Unpacking gcc-13-base:armhf (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Setting up gcc-13-base:armhf (13.2.0-9+rpi1) ...
(Reading database ... 13031 files and directories currently installed.)
Preparing to unpack .../libgcc-s1_13.2.0-9+rpi1_armhf.deb ...
Unpacking libgcc-s1:armhf (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Setting up libgcc-s1:armhf (13.2.0-9+rpi1) ...
(Reading database ... 13031 files and directories currently installed.)
Preparing to unpack .../libgomp1_13.2.0-9+rpi1_armhf.deb ...
Unpacking libgomp1:armhf (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Preparing to unpack .../libatomic1_13.2.0-9+rpi1_armhf.deb ...
Unpacking libatomic1:armhf (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Setting up libatomic1:armhf (13.2.0-9+rpi1) ...
(Reading database ... 13031 files and directories currently installed.)
Preparing to unpack .../0-libasan8_13.2.0-9+rpi1_armhf.deb ...
Unpacking libasan8:armhf (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Preparing to unpack .../1-libubsan1_13.2.0-9+rpi1_armhf.deb ...
Unpacking libubsan1:armhf (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Preparing to unpack .../2-g++-13_13.2.0-9+rpi1_armhf.deb ...
Unpacking g++-13 (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Preparing to unpack .../3-libstdc++-13-dev_13.2.0-9+rpi1_armhf.deb ...
Unpacking libstdc++-13-dev:armhf (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Preparing to unpack .../4-libgcc-13-dev_13.2.0-9+rpi1_armhf.deb ...
Unpacking libgcc-13-dev:armhf (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Preparing to unpack .../5-gcc-13_13.2.0-9+rpi1_armhf.deb ...
Unpacking gcc-13 (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Preparing to unpack .../6-cpp-13_13.2.0-9+rpi1_armhf.deb ...
Unpacking cpp-13 (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Preparing to unpack .../7-libstdc++6_13.2.0-9+rpi1_armhf.deb ...
Unpacking libstdc++6:armhf (13.2.0-9+rpi1) over (13.2.0-7+rpi1) ...
Setting up libstdc++6:armhf (13.2.0-9+rpi1) ...
(Reading database ... 13031 files and directories currently installed.)
Preparing to unpack .../zlib1g_1%3a1.3.dfsg-3_armhf.deb ...
Unpacking zlib1g:armhf (1:1.3.dfsg-3) over (1:1.2.13.dfsg-3) ...
Setting up zlib1g:armhf (1:1.3.dfsg-3) ...
Selecting previously unselected package libexpat1:armhf.
(Reading database ... 13031 files and directories currently installed.)
Preparing to unpack .../libexpat1_2.5.0-2_armhf.deb ...
Unpacking libexpat1:armhf (2.5.0-2) ...
Selecting previously unselected package python3.11-minimal.
Preparing to unpack .../python3.11-minimal_3.11.7-2_armhf.deb ...
Unpacking python3.11-minimal (3.11.7-2) ...
Setting up libpython3.11-minimal:armhf (3.11.7-2) ...
Setting up libexpat1:armhf (2.5.0-2) ...
Setting up python3.11-minimal (3.11.7-2) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 13051 files and directories currently installed.)
Preparing to unpack .../python3-minimal_3.11.4-5_armhf.deb ...
Unpacking python3-minimal (3.11.4-5) ...
Selecting previously unselected package media-types.
Preparing to unpack .../media-types_10.1.0_all.deb ...
Unpacking media-types (10.1.0) ...
Selecting previously unselected package netbase.
Preparing to unpack .../archives/netbase_6.4_all.deb ...
Unpacking netbase (6.4) ...
Preparing to unpack .../libuuid1_2.39.3-6_armhf.deb ...
Unpacking libuuid1:armhf (2.39.3-6) over (2.39.3-2) ...
Setting up libuuid1:armhf (2.39.3-6) ...
Selecting previously unselected package libpython3.11-stdlib:armhf.
(Reading database ... 13085 files and directories currently installed.)
Preparing to unpack .../libpython3.11-stdlib_3.11.7-2_armhf.deb ...
Unpacking libpython3.11-stdlib:armhf (3.11.7-2) ...
Selecting previously unselected package python3.11.
Preparing to unpack .../python3.11_3.11.7-2_armhf.deb ...
Unpacking python3.11 (3.11.7-2) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../libpython3-stdlib_3.11.4-5_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.11.4-5) ...
Setting up python3-minimal (3.11.4-5) ...
Selecting previously unselected package python3.
(Reading database ... 13485 files and directories currently installed.)
Preparing to unpack .../python3_3.11.4-5_armhf.deb ...
Unpacking python3 (3.11.4-5) ...
Preparing to unpack .../libblkid1_2.39.3-6_armhf.deb ...
Unpacking libblkid1:armhf (2.39.3-6) over (2.39.3-2) ...
Setting up libblkid1:armhf (2.39.3-6) ...
(Reading database ... 13506 files and directories currently installed.)
Preparing to unpack .../libmount1_2.39.3-6_armhf.deb ...
Unpacking libmount1:armhf (2.39.3-6) over (2.39.3-2) ...
Setting up libmount1:armhf (2.39.3-6) ...
(Reading database ... 13506 files and directories currently installed.)
Preparing to unpack .../libsmartcols1_2.39.3-6_armhf.deb ...
Unpacking libsmartcols1:armhf (2.39.3-6) over (2.39.3-2) ...
Setting up libsmartcols1:armhf (2.39.3-6) ...
Selecting previously unselected package libuchardet0:armhf.
(Reading database ... 13506 files and directories currently installed.)
Preparing to unpack .../000-libuchardet0_0.0.8-1_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.8-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../001-groff-base_1.23.0-3_armhf.deb ...
Unpacking groff-base (1.23.0-3) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../002-bsdextrautils_2.39.3-6_armhf.deb ...
Unpacking bsdextrautils (2.39.3-6) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../003-libpipeline1_1.5.7-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.7-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../004-man-db_2.12.0-3_armhf.deb ...
Unpacking man-db (2.12.0-3) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../005-sensible-utils_0.0.20_all.deb ...
Unpacking sensible-utils (0.0.20) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../006-libmagic-mgc_1%3a5.45-2_armhf.deb ...
Unpacking libmagic-mgc (1:5.45-2) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../007-libmagic1_1%3a5.45-2_armhf.deb ...
Unpacking libmagic1:armhf (1:5.45-2) ...
Selecting previously unselected package file.
Preparing to unpack .../008-file_1%3a5.45-2_armhf.deb ...
Unpacking file (1:5.45-2) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../009-gettext-base_0.21-14_armhf.deb ...
Unpacking gettext-base (0.21-14) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../010-python3-lib2to3_3.11.5-1_all.deb ...
Unpacking python3-lib2to3 (3.11.5-1) ...
Selecting previously unselected package 2to3.
Preparing to unpack .../011-2to3_3.11.4-5_all.deb ...
Unpacking 2to3 (3.11.4-5) ...
Selecting previously unselected package m4.
Preparing to unpack .../012-m4_1.4.19-4_armhf.deb ...
Unpacking m4 (1.4.19-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../013-autoconf_2.71-3_all.deb ...
Unpacking autoconf (2.71-3) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../014-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../015-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../016-autopoint_0.21-14_all.deb ...
Unpacking autopoint (0.21-14) ...
Selecting previously unselected package libtcl8.6:armhf.
Preparing to unpack .../017-libtcl8.6_8.6.13+dfsg-2_armhf.deb ...
Unpacking libtcl8.6:armhf (8.6.13+dfsg-2) ...
Selecting previously unselected package libbrotli1:armhf.
Preparing to unpack .../018-libbrotli1_1.1.0-2_armhf.deb ...
Unpacking libbrotli1:armhf (1.1.0-2) ...
Selecting previously unselected package libpng16-16:armhf.
Preparing to unpack .../019-libpng16-16_1.6.40-3_armhf.deb ...
Unpacking libpng16-16:armhf (1.6.40-3) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../020-libfreetype6_2.13.2+dfsg-1_armhf.deb ...
Unpacking libfreetype6:armhf (2.13.2+dfsg-1) ...
Selecting previously unselected package fonts-dejavu-mono.
Preparing to unpack .../021-fonts-dejavu-mono_2.37-8_all.deb ...
Unpacking fonts-dejavu-mono (2.37-8) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../022-fonts-dejavu-core_2.37-8_all.deb ...
Unpacking fonts-dejavu-core (2.37-8) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../023-fontconfig-config_2.14.2-6_armhf.deb ...
Unpacking fontconfig-config (2.14.2-6) ...
Selecting previously unselected package libfontconfig1:armhf.
Preparing to unpack .../024-libfontconfig1_2.14.2-6_armhf.deb ...
Unpacking libfontconfig1:armhf (2.14.2-6) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../025-libxau6_1%3a1.0.9-1_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.9-1) ...
Selecting previously unselected package libbsd0:armhf.
Preparing to unpack .../026-libbsd0_0.11.8-1_armhf.deb ...
Unpacking libbsd0:armhf (0.11.8-1) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../027-libxdmcp6_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../028-libxcb1_1.15-1_armhf.deb ...
Unpacking libxcb1:armhf (1.15-1) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../029-libx11-data_2%3a1.8.7-1_all.deb ...
Unpacking libx11-data (2:1.8.7-1) ...
Selecting previously unselected package libx11-6:armhf.
Preparing to unpack .../030-libx11-6_2%3a1.8.7-1_armhf.deb ...
Unpacking libx11-6:armhf (2:1.8.7-1) ...
Selecting previously unselected package libxrender1:armhf.
Preparing to unpack .../031-libxrender1_1%3a0.9.10-1.1_armhf.deb ...
Unpacking libxrender1:armhf (1:0.9.10-1.1) ...
Selecting previously unselected package libxft2:armhf.
Preparing to unpack .../032-libxft2_2.3.6-1_armhf.deb ...
Unpacking libxft2:armhf (2.3.6-1) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../033-libxext6_2%3a1.3.4-1_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.4-1) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../034-x11-common_1%3a7.7+23_all.deb ...
Unpacking x11-common (1:7.7+23) ...
Selecting previously unselected package libxss1:armhf.
Preparing to unpack .../035-libxss1_1%3a1.2.3-1_armhf.deb ...
Unpacking libxss1:armhf (1:1.2.3-1) ...
Selecting previously unselected package libtk8.6:armhf.
Preparing to unpack .../036-libtk8.6_8.6.13-2_armhf.deb ...
Unpacking libtk8.6:armhf (8.6.13-2) ...
Selecting previously unselected package tk8.6-blt2.5.
Preparing to unpack .../037-tk8.6-blt2.5_2.5.3+dfsg-7_armhf.deb ...
Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ...
Selecting previously unselected package blt.
Preparing to unpack .../038-blt_2.5.3+dfsg-7_armhf.deb ...
Unpacking blt (2.5.3+dfsg-7) ...
Selecting previously unselected package cython3.
Preparing to unpack .../039-cython3_3.0.7-2_armhf.deb ...
Unpacking cython3 (3.0.7-2) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../040-libdebhelper-perl_13.11.9_all.deb ...
Unpacking libdebhelper-perl (13.11.9) ...
Selecting previously unselected package libtool.
Preparing to unpack .../041-libtool_2.4.7-7_all.deb ...
Unpacking libtool (2.4.7-7) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../042-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../043-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../044-libsub-override-perl_0.10-1_all.deb ...
Unpacking libsub-override-perl (0.10-1) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../045-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../046-dh-strip-nondeterminism_1.13.1-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.13.1-1) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../047-libelf1_0.188-2.1+rpi1_armhf.deb ...
Unpacking libelf1:armhf (0.188-2.1+rpi1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../048-dwz_0.15-1_armhf.deb ...
Unpacking dwz (0.15-1) ...
Selecting previously unselected package libicu72:armhf.
Preparing to unpack .../049-libicu72_72.1-4_armhf.deb ...
Unpacking libicu72:armhf (72.1-4) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../050-libxml2_2.9.14+dfsg-1.3_armhf.deb ...
Unpacking libxml2:armhf (2.9.14+dfsg-1.3) ...
Selecting previously unselected package gettext.
Preparing to unpack .../051-gettext_0.21-14_armhf.deb ...
Unpacking gettext (0.21-14) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../052-intltool-debian_0.35.0+20060710.6_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.6) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../053-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../054-debhelper_13.11.9_all.deb ...
Unpacking debhelper (13.11.9) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../055-python3-distutils_3.11.5-1_all.deb ...
Unpacking python3-distutils (3.11.5-1) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../056-python3-pkg-resources_68.1.2-2_all.deb ...
Unpacking python3-pkg-resources (68.1.2-2) ...
Selecting previously unselected package python3-setuptools.
Preparing to unpack .../057-python3-setuptools_68.1.2-2_all.deb ...
Unpacking python3-setuptools (68.1.2-2) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../058-dh-python_6.20231223_all.deb ...
Unpacking dh-python (6.20231223) ...
Selecting previously unselected package fonts-lyx.
Preparing to unpack .../059-fonts-lyx_2.3.7-1_all.deb ...
Unpacking fonts-lyx (2.3.7-1) ...
Selecting previously unselected package libblas3:armhf.
Preparing to unpack .../060-libblas3_3.11.0-2_armhf.deb ...
Unpacking libblas3:armhf (3.11.0-2) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../061-libnghttp2-14_1.58.0-1_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.58.0-1) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../062-libpsl5_0.21.2-1+b1_armhf.deb ...
Unpacking libpsl5:armhf (0.21.2-1+b1) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../063-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../064-libssh2-1_1.11.0-4_armhf.deb ...
Unpacking libssh2-1:armhf (1.11.0-4) ...
Selecting previously unselected package libcurl3-gnutls:armhf.
Preparing to unpack .../065-libcurl3-gnutls_8.5.0-2+rpi1_armhf.deb ...
Unpacking libcurl3-gnutls:armhf (8.5.0-2+rpi1) ...
Selecting previously unselected package libdeflate0:armhf.
Preparing to unpack .../066-libdeflate0_1.18-1_armhf.deb ...
Unpacking libdeflate0:armhf (1.18-1) ...
Selecting previously unselected package libexpat1-dev:armhf.
Preparing to unpack .../067-libexpat1-dev_2.5.0-2_armhf.deb ...
Unpacking libexpat1-dev:armhf (2.5.0-2) ...
Selecting previously unselected package libfribidi0:armhf.
Preparing to unpack .../068-libfribidi0_1.0.13-3_armhf.deb ...
Unpacking libfribidi0:armhf (1.0.13-3) ...
Selecting previously unselected package libgfortran5:armhf.
Preparing to unpack .../069-libgfortran5_13.2.0-9+rpi1_armhf.deb ...
Unpacking libgfortran5:armhf (13.2.0-9+rpi1) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../070-libglib2.0-0_2.78.3-1_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.78.3-1) ...
Selecting previously unselected package libgraphite2-3:armhf.
Preparing to unpack .../071-libgraphite2-3_1.3.14-2_armhf.deb ...
Unpacking libgraphite2-3:armhf (1.3.14-2) ...
Selecting previously unselected package libharfbuzz0b:armhf.
Preparing to unpack .../072-libharfbuzz0b_8.0.1-1_armhf.deb ...
Unpacking libharfbuzz0b:armhf (8.0.1-1) ...
Selecting previously unselected package libhtscodecs2:armhf.
Preparing to unpack .../073-libhtscodecs2_1.6.0-1_armhf.deb ...
Unpacking libhtscodecs2:armhf (1.6.0-1) ...
Selecting previously unselected package libhts3:armhf.
Preparing to unpack .../074-libhts3_1.18+ds-1_armhf.deb ...
Unpacking libhts3:armhf (1.18+ds-1) ...
Selecting previously unselected package libimagequant0:armhf.
Preparing to unpack .../075-libimagequant0_2.18.0-1_armhf.deb ...
Unpacking libimagequant0:armhf (2.18.0-1) ...
Selecting previously unselected package libjbig0:armhf.
Preparing to unpack .../076-libjbig0_2.1-6.1_armhf.deb ...
Unpacking libjbig0:armhf (2.1-6.1) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../077-libjpeg62-turbo_1%3a2.1.5-2_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:2.1.5-2) ...
Selecting previously unselected package libjs-jquery.
Preparing to unpack .../078-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ...
Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Selecting previously unselected package libjs-jquery-ui.
Preparing to unpack .../079-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ...
Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ...
Selecting previously unselected package libjs-underscore.
Preparing to unpack .../080-libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb ...
Unpacking libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Selecting previously unselected package libjs-sphinxdoc.
Preparing to unpack .../081-libjs-sphinxdoc_7.2.6-3_all.deb ...
Unpacking libjs-sphinxdoc (7.2.6-3) ...
Selecting previously unselected package liblapack3:armhf.
Preparing to unpack .../082-liblapack3_3.11.0-2_armhf.deb ...
Unpacking liblapack3:armhf (3.11.0-2) ...
Selecting previously unselected package liblbfgsb0:armhf.
Preparing to unpack .../083-liblbfgsb0_3.0+dfsg.4-1_armhf.deb ...
Unpacking liblbfgsb0:armhf (3.0+dfsg.4-1) ...
Selecting previously unselected package liblcms2-2:armhf.
Preparing to unpack .../084-liblcms2-2_2.14-2_armhf.deb ...
Unpacking liblcms2-2:armhf (2.14-2) ...
Selecting previously unselected package liblerc4:armhf.
Preparing to unpack .../085-liblerc4_4.0.0+ds-4_armhf.deb ...
Unpacking liblerc4:armhf (4.0.0+ds-4) ...
Selecting previously unselected package libopenjp2-7:armhf.
Preparing to unpack .../086-libopenjp2-7_2.5.0-2_armhf.deb ...
Unpacking libopenjp2-7:armhf (2.5.0-2) ...
Selecting previously unselected package libpython3.11:armhf.
Preparing to unpack .../087-libpython3.11_3.11.7-2_armhf.deb ...
Unpacking libpython3.11:armhf (3.11.7-2) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../088-zlib1g-dev_1%3a1.3.dfsg-3_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.3.dfsg-3) ...
Selecting previously unselected package libpython3.11-dev:armhf.
Preparing to unpack .../089-libpython3.11-dev_3.11.7-2_armhf.deb ...
Unpacking libpython3.11-dev:armhf (3.11.7-2) ...
Selecting previously unselected package libpython3-dev:armhf.
Preparing to unpack .../090-libpython3-dev_3.11.4-5_armhf.deb ...
Unpacking libpython3-dev:armhf (3.11.4-5) ...
Selecting previously unselected package libpython3-all-dev:armhf.
Preparing to unpack .../091-libpython3-all-dev_3.11.4-5_armhf.deb ...
Unpacking libpython3-all-dev:armhf (3.11.4-5) ...
Selecting previously unselected package libqhull-r8.0:armhf.
Preparing to unpack .../092-libqhull-r8.0_2020.2-6_armhf.deb ...
Unpacking libqhull-r8.0:armhf (2020.2-6) ...
Selecting previously unselected package libraqm0:armhf.
Preparing to unpack .../093-libraqm0_0.10.1-1_armhf.deb ...
Unpacking libraqm0:armhf (0.10.1-1) ...
Selecting previously unselected package libsharpyuv0:armhf.
Preparing to unpack .../094-libsharpyuv0_1.3.2-0.3_armhf.deb ...
Unpacking libsharpyuv0:armhf (1.3.2-0.3) ...
Selecting previously unselected package libwebp7:armhf.
Preparing to unpack .../095-libwebp7_1.3.2-0.3_armhf.deb ...
Unpacking libwebp7:armhf (1.3.2-0.3) ...
Selecting previously unselected package libtiff6:armhf.
Preparing to unpack .../096-libtiff6_4.5.1+git230720-3_armhf.deb ...
Unpacking libtiff6:armhf (4.5.1+git230720-3) ...
Selecting previously unselected package libwebpdemux2:armhf.
Preparing to unpack .../097-libwebpdemux2_1.3.2-0.3_armhf.deb ...
Unpacking libwebpdemux2:armhf (1.3.2-0.3) ...
Selecting previously unselected package libwebpmux3:armhf.
Preparing to unpack .../098-libwebpmux3_1.3.2-0.3_armhf.deb ...
Unpacking libwebpmux3:armhf (1.3.2-0.3) ...
Selecting previously unselected package libxslt1.1:armhf.
Preparing to unpack .../099-libxslt1.1_1.1.35-1_armhf.deb ...
Unpacking libxslt1.1:armhf (1.1.35-1) ...
Selecting previously unselected package python-matplotlib-data.
Preparing to unpack .../100-python-matplotlib-data_3.6.3-1_all.deb ...
Unpacking python-matplotlib-data (3.6.3-1) ...
Selecting previously unselected package python3-all.
Preparing to unpack .../101-python3-all_3.11.4-5_armhf.deb ...
Unpacking python3-all (3.11.4-5) ...
Selecting previously unselected package python3.11-dev.
Preparing to unpack .../102-python3.11-dev_3.11.7-2_armhf.deb ...
Unpacking python3.11-dev (3.11.7-2) ...
Selecting previously unselected package python3-dev.
Preparing to unpack .../103-python3-dev_3.11.4-5_armhf.deb ...
Unpacking python3-dev (3.11.4-5) ...
Selecting previously unselected package python3-all-dev.
Preparing to unpack .../104-python3-all-dev_3.11.4-5_armhf.deb ...
Unpacking python3-all-dev (3.11.4-5) ...
Selecting previously unselected package python3-appdirs.
Preparing to unpack .../105-python3-appdirs_1.4.4-4_all.deb ...
Unpacking python3-appdirs (1.4.4-4) ...
Selecting previously unselected package python3-attr.
Preparing to unpack .../106-python3-attr_23.2.0-1_all.deb ...
Unpacking python3-attr (23.2.0-1) ...
Selecting previously unselected package python3-brotli.
Preparing to unpack .../107-python3-brotli_1.1.0-2_armhf.deb ...
Unpacking python3-brotli (1.1.0-2) ...
Selecting previously unselected package python3-chardet.
Preparing to unpack .../108-python3-chardet_5.2.0+dfsg-1_all.deb ...
Unpacking python3-chardet (5.2.0+dfsg-1) ...
Selecting previously unselected package python3-numpy.
Preparing to unpack .../109-python3-numpy_1%3a1.24.2-2_armhf.deb ...
Unpacking python3-numpy (1:1.24.2-2) ...
Selecting previously unselected package python3-contourpy.
Preparing to unpack .../110-python3-contourpy_1.0.7-1_armhf.deb ...
Unpacking python3-contourpy (1.0.7-1) ...
Selecting previously unselected package python3-cycler.
Preparing to unpack .../111-python3-cycler_0.11.0-1_all.deb ...
Unpacking python3-cycler (0.11.0-1) ...
Selecting previously unselected package python3-six.
Preparing to unpack .../112-python3-six_1.16.0-4_all.deb ...
Unpacking python3-six (1.16.0-4) ...
Selecting previously unselected package python3-dateutil.
Preparing to unpack .../113-python3-dateutil_2.8.2-3_all.deb ...
Unpacking python3-dateutil (2.8.2-3) ...
Selecting previously unselected package python3-debian.
Preparing to unpack .../114-python3-debian_0.1.49_all.deb ...
Unpacking python3-debian (0.1.49) ...
Selecting previously unselected package python3-decorator.
Preparing to unpack .../115-python3-decorator_5.1.1-5_all.deb ...
Unpacking python3-decorator (5.1.1-5) ...
Selecting previously unselected package python3-scipy.
Preparing to unpack .../116-python3-scipy_1.10.1-5+rpi1_armhf.deb ...
Unpacking python3-scipy (1.10.1-5+rpi1) ...
Selecting previously unselected package python3-ufolib2.
Preparing to unpack .../117-python3-ufolib2_0.16.0+dfsg1-1_all.deb ...
Unpacking python3-ufolib2 (0.16.0+dfsg1-1) ...
Selecting previously unselected package python3-mpmath.
Preparing to unpack .../118-python3-mpmath_1.2.1-2_all.deb ...
Unpacking python3-mpmath (1.2.1-2) ...
Selecting previously unselected package python3-sympy.
Preparing to unpack .../119-python3-sympy_1.12-6_all.deb ...
Unpacking python3-sympy (1.12-6) ...
Selecting previously unselected package python3-tz.
Preparing to unpack .../120-python3-tz_2023.3.post1-2_all.deb ...
Unpacking python3-tz (2023.3.post1-2) ...
Selecting previously unselected package python3-fs.
Preparing to unpack .../121-python3-fs_2.4.16-3_all.deb ...
Unpacking python3-fs (2.4.16-3) ...
Selecting previously unselected package python3-lxml:armhf.
Preparing to unpack .../122-python3-lxml_4.9.4-1_armhf.deb ...
Unpacking python3-lxml:armhf (4.9.4-1) ...
Selecting previously unselected package python3-lz4.
Preparing to unpack .../123-python3-lz4_4.0.2+dfsg-1+b1_armhf.deb ...
Unpacking python3-lz4 (4.0.2+dfsg-1+b1) ...
Selecting previously unselected package unicode-data.
Preparing to unpack .../124-unicode-data_15.1.0-1_all.deb ...
Unpacking unicode-data (15.1.0-1) ...
Selecting previously unselected package python3-fonttools.
Preparing to unpack .../125-python3-fonttools_4.46.0-1_armhf.deb ...
Unpacking python3-fonttools (4.46.0-1) ...
Selecting previously unselected package python3-kiwisolver.
Preparing to unpack .../126-python3-kiwisolver_1.4.4-1_armhf.deb ...
Unpacking python3-kiwisolver (1.4.4-1) ...
Selecting previously unselected package python3-pil:armhf.
Preparing to unpack .../127-python3-pil_10.1.0-1_armhf.deb ...
Unpacking python3-pil:armhf (10.1.0-1) ...
Selecting previously unselected package python3-tk:armhf.
Preparing to unpack .../128-python3-tk_3.11.5-1_armhf.deb ...
Unpacking python3-tk:armhf (3.11.5-1) ...
Selecting previously unselected package python3-pil.imagetk:armhf.
Preparing to unpack .../129-python3-pil.imagetk_10.1.0-1_armhf.deb ...
Unpacking python3-pil.imagetk:armhf (10.1.0-1) ...
Selecting previously unselected package python3-pyparsing.
Preparing to unpack .../130-python3-pyparsing_3.1.1-1_all.deb ...
Unpacking python3-pyparsing (3.1.1-1) ...
Selecting previously unselected package python3-packaging.
Preparing to unpack .../131-python3-packaging_23.2-1_all.deb ...
Unpacking python3-packaging (23.2-1) ...
Selecting previously unselected package python3-matplotlib.
Preparing to unpack .../132-python3-matplotlib_3.6.3-1_armhf.deb ...
Unpacking python3-matplotlib (3.6.3-1) ...
Selecting previously unselected package python3-pysam.
Preparing to unpack .../133-python3-pysam_0.22.0+ds-1+rpi1_armhf.deb ...
Unpacking python3-pysam (0.22.0+ds-1+rpi1) ...
Selecting previously unselected package swig4.0.
Preparing to unpack .../134-swig4.0_4.1.0-0.3_armhf.deb ...
Unpacking swig4.0 (4.1.0-0.3) ...
Selecting previously unselected package swig.
Preparing to unpack .../135-swig_4.1.0-0.3_all.deb ...
Unpacking swig (4.1.0-0.3) ...
Selecting previously unselected package sbuild-build-depends-main-dummy.
Preparing to unpack .../136-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ...
Setting up libhtscodecs2:armhf (1.6.0-1) ...
Setting up media-types (10.1.0) ...
Setting up libpipeline1:armhf (1.5.7-1) ...
Setting up libgraphite2-3:armhf (1.3.14-2) ...
Setting up liblcms2-2:armhf (2.14-2) ...
Setting up libsharpyuv0:armhf (1.3.2-0.3) ...
Setting up libxau6:armhf (1:1.0.9-1) ...
Setting up libpsl5:armhf (0.21.2-1+b1) ...
Setting up libicu72:armhf (72.1-4) ...
Setting up liblerc4:armhf (4.0.0+ds-4) ...
Setting up bsdextrautils (2.39.3-6) ...
Setting up cpp-13 (13.2.0-9+rpi1) ...
Setting up libmagic-mgc (1:5.45-2) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.78.3-1) ...
No schema files found: doing nothing.
Setting up fonts-lyx (2.3.7-1) ...
Setting up libdebhelper-perl (13.11.9) ...
Setting up libbrotli1:armhf (1.1.0-2) ...
Setting up x11-common (1:7.7+23) ...
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of restart.
Setting up libnghttp2-14:armhf (1.58.0-1) ...
Setting up libmagic1:armhf (1:5.45-2) ...
Setting up libdeflate0:armhf (1.18-1) ...
Setting up gettext-base (0.21-14) ...
Setting up m4 (1.4.19-4) ...
Setting up libqhull-r8.0:armhf (2020.2-6) ...
Setting up file (1:5.45-2) ...
Setting up libgomp1:armhf (13.2.0-9+rpi1) ...
Setting up libjbig0:armhf (2.1-6.1) ...
Setting up unicode-data (15.1.0-1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libblas3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libexpat1-dev:armhf (2.5.0-2) ...
Setting up libjpeg62-turbo:armhf (1:2.1.5-2) ...
Setting up libx11-data (2:1.8.7-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libfribidi0:armhf (1.0.13-3) ...
Setting up libimagequant0:armhf (2.18.0-1) ...
Setting up fonts-dejavu-mono (2.37-8) ...
Setting up libpng16-16:armhf (1.6.40-3) ...
Setting up libtcl8.6:armhf (8.6.13+dfsg-2) ...
Setting up autopoint (0.21-14) ...
Setting up fonts-dejavu-core (2.37-8) ...
Setting up libgfortran5:armhf (13.2.0-9+rpi1) ...
Setting up autoconf (2.71-3) ...
Setting up libwebp7:armhf (1.3.2-0.3) ...
Setting up libubsan1:armhf (13.2.0-9+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.3.dfsg-3) ...
Setting up mount (2.39.3-6) ...
Setting up sensible-utils (0.0.20) ...
Setting up libtiff6:armhf (4.5.1+git230720-3) ...
Setting up libasan8:armhf (13.2.0-9+rpi1) ...
Setting up libuchardet0:armhf (0.0.8-1) ...
Setting up libopenjp2-7:armhf (2.5.0-2) ...
Setting up libsub-override-perl (0.10-1) ...
Setting up libssh2-1:armhf (1.11.0-4) ...
Setting up netbase (6.4) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up swig4.0 (4.1.0-0.3) ...
Setting up python-matplotlib-data (3.6.3-1) ...
Setting up libwebpmux3:armhf (1.3.2-0.3) ...
Setting up libbsd0:armhf (0.11.8-1) ...
Setting up libelf1:armhf (0.188-2.1+rpi1) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.3) ...
Setting up libcc1-0:armhf (13.2.0-9+rpi1) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libxcb1:armhf (1.15-1) ...
Setting up gettext (0.21-14) ...
Setting up swig (4.1.0-0.3) ...
Setting up libtool (2.4.7-7) ...
Setting up fontconfig-config (2.14.2-6) ...
Setting up libwebpdemux2:armhf (1.3.2-0.3) ...
Setting up libpython3.11-stdlib:armhf (3.11.7-2) ...
Setting up libcurl3-gnutls:armhf (8.5.0-2+rpi1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
Setting up libfreetype6:armhf (2.13.2+dfsg-1) ...
Setting up libjs-sphinxdoc (7.2.6-3) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up dwz (0.15-1) ...
Setting up libgcc-13-dev:armhf (13.2.0-9+rpi1) ...
Setting up groff-base (1.23.0-3) ...
Setting up libxslt1.1:armhf (1.1.35-1) ...
Setting up libx11-6:armhf (2:1.8.7-1) ...
Setting up libharfbuzz0b:armhf (8.0.1-1) ...
Setting up libfontconfig1:armhf (2.14.2-6) ...
Setting up libstdc++-13-dev:armhf (13.2.0-9+rpi1) ...
Setting up libpython3-stdlib:armhf (3.11.4-5) ...
Setting up liblbfgsb0:armhf (3.0+dfsg.4-1) ...
Setting up python3.11 (3.11.7-2) ...
Setting up libhts3:armhf (1.18+ds-1) ...
Setting up libpython3.11:armhf (3.11.7-2) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up python3 (3.11.4-5) ...
Setting up man-db (2.12.0-3) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-tz (2023.3.post1-2) ...
Setting up python3-six (1.16.0-4) ...
Setting up python3-decorator (5.1.1-5) ...
Setting up python3-packaging (23.2-1) ...
Setting up python3-pyparsing (3.1.1-1) ...
Setting up libpython3.11-dev:armhf (3.11.7-2) ...
Setting up python3-brotli (1.1.0-2) ...
Setting up libraqm0:armhf (0.10.1-1) ...
Setting up python3-cycler (0.11.0-1) ...
Setting up python3-kiwisolver (1.4.4-1) ...
Setting up gcc-13 (13.2.0-9+rpi1) ...
Setting up cython3 (3.0.7-2) ...
Setting up python3-lxml:armhf (4.9.4-1) ...
Setting up python3-dateutil (2.8.2-3) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up python3-mpmath (1.2.1-2) ...
Setting up python3-lib2to3 (3.11.5-1) ...
Setting up python3-appdirs (1.4.4-4) ...
Setting up python3-pkg-resources (68.1.2-2) ...
Setting up python3-distutils (3.11.5-1) ...
Setting up python3-sympy (1.12-6) ...
Setting up python3-attr (23.2.0-1) ...
Setting up g++-13 (13.2.0-9+rpi1) ...
Setting up libxft2:armhf (2.3.6-1) ...
Setting up python3-pysam (0.22.0+ds-1+rpi1) ...
Setting up libpython3-dev:armhf (3.11.4-5) ...
Setting up python3-setuptools (68.1.2-2) ...
Setting up python3-lz4 (4.0.2+dfsg-1+b1) ...
Setting up python3.11-dev (3.11.7-2) ...
Setting up libtk8.6:armhf (8.6.13-2) ...
Setting up python3-all (3.11.4-5) ...
Setting up debhelper (13.11.9) ...
Setting up 2to3 (3.11.4-5) ...
Setting up python3-fs (2.4.16-3) ...
Setting up python3-pil:armhf (10.1.0-1) ...
Setting up python3-chardet (5.2.0+dfsg-1) ...
Setting up libpython3-all-dev:armhf (3.11.4-5) ...
Setting up python3-debian (0.1.49) ...
Setting up python3-dev (3.11.4-5) ...
Setting up python3-numpy (1:1.24.2-2) ...
Setting up python3-contourpy (1.0.7-1) ...
Setting up dh-python (6.20231223) ...
Setting up python3-all-dev (3.11.4-5) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ...
Setting up python3-scipy (1.10.1-5+rpi1) ...
Setting up blt (2.5.3+dfsg-7) ...
Setting up python3-tk:armhf (3.11.5-1) ...
Setting up python3-pil.imagetk:armhf (10.1.0-1) ...
Setting up python3-fonttools (4.46.0-1) ...
Setting up python3-ufolib2 (0.16.0+dfsg1-1) ...
Setting up python3-matplotlib (3.6.3-1) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.37-12+rpi2) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.47-v8+ #1 SMP PREEMPT Fri Sep 1 07:05:33 BST 2023 arm64 (aarch64)
Toolchain package versions: binutils_2.41-6+rpi1 dpkg-dev_1.22.1+rpi1 g++-12_12.3.0-13+rpi1 g++-13_13.2.0-9+rpi1 gcc-12_12.3.0-13+rpi1 gcc-13_13.2.0-9+rpi1 libc6-dev_2.37-12+rpi2 libstdc++-12-dev_12.3.0-13+rpi1 libstdc++-13-dev_13.2.0-9+rpi1 libstdc++6_13.2.0-9+rpi1 linux-libc-dev_6.5.6-1+rpi1
Package versions: 2to3_3.11.4-5 adduser_3.137 apt_2.7.6 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13+rpi1 base-passwd_3.6.3 bash_5.2.21-2 binutils_2.41-6+rpi1 binutils-arm-linux-gnueabihf_2.41-6+rpi1 binutils-common_2.41-6+rpi1 blt_2.5.3+dfsg-7 bsdextrautils_2.39.3-6 bsdutils_1:2.39.3-6 build-essential_12.10 bzip2_1.0.8-5+b2 coreutils_9.1-1 cpp_4:13.2.0-1+rpi1 cpp-12_12.3.0-13+rpi1 cpp-13_13.2.0-9+rpi1 cython3_3.0.7-2 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.9 debianutils_5.14 dh-autoreconf_20 dh-python_6.20231223 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dirmngr_2.2.40-1.1 dpkg_1.22.1+rpi1 dpkg-dev_1.22.1+rpi1 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.32.2-1 file_1:5.45-2 findutils_4.9.0-5 fontconfig-config_2.14.2-6 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lyx_2.3.7-1 g++_4:13.2.0-1+rpi1 g++-12_12.3.0-13+rpi1 g++-13_13.2.0-9+rpi1 gcc_4:13.2.0-1+rpi1 gcc-10-base_10.4.0-7+rpi1 gcc-12_12.3.0-13+rpi1 gcc-12-base_12.3.0-13+rpi1 gcc-13_13.2.0-9+rpi1 gcc-13-base_13.2.0-9+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-14 gettext-base_0.21-14 gnupg_2.2.40-1.1 gnupg-l10n_2.2.40-1.1 gnupg-utils_2.2.40-1.1 gpg_2.2.40-1.1 gpg-agent_2.2.40-1.1 gpg-wks-client_2.2.40-1.1 gpg-wks-server_2.2.40-1.1 gpgconf_2.2.40-1.1 gpgsm_2.2.40-1.1 gpgv_2.2.40-1.1 grep_3.11-3 groff-base_1.23.0-3 gzip_1.12-1 hostname_3.23+nmu1 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.7.6 libarchive-zip-perl_1.68-1 libasan8_13.2.0-9+rpi1 libassuan0_2.5.6-1 libatomic1_13.2.0-9+rpi1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.2-1 libaudit1_1:3.1.2-1 libbinutils_2.41-6+rpi1 libblas3_3.11.0-2 libblkid1_2.39.3-6 libbrotli1_1.1.0-2 libbsd0_0.11.8-1 libbz2-1.0_1.0.8-5+b2 libc-bin_2.37-12+rpi2 libc-dev-bin_2.37-12+rpi2 libc6_2.37-12+rpi2 libc6-dev_2.37-12+rpi2 libcap-ng0_0.8.3-3 libcap2_1:2.66-4 libcc1-0_13.2.0-9+rpi1 libcom-err2_1.47.0-2 libcrypt-dev_1:4.4.36-2 libcrypt1_1:4.4.36-2 libctf-nobfd0_2.41-6+rpi1 libctf0_2.41-6+rpi1 libcurl3-gnutls_8.5.0-2+rpi1 libdb5.3_5.3.28+dfsg2-4 libdebconfclient0_0.271 libdebhelper-perl_13.11.9 libdeflate0_1.18-1 libdpkg-perl_1.22.1+rpi1 libelf1_0.188-2.1+rpi1 libexpat1_2.5.0-2 libexpat1-dev_2.5.0-2 libext2fs2_1.47.0-2 libfakeroot_1.32.2-1 libffi8_3.4.4-2 libfile-find-rule-perl_0.34-3 libfile-stripnondeterminism-perl_1.13.1-1 libfontconfig1_2.14.2-6 libfreetype6_2.13.2+dfsg-1 libfribidi0_1.0.13-3 libgcc-12-dev_12.3.0-13+rpi1 libgcc-13-dev_13.2.0-9+rpi1 libgcc-s1_13.2.0-9+rpi1 libgcrypt20_1.10.3-2 libgdbm-compat4_1.23-5 libgdbm6_1.23-5 libgfortran5_13.2.0-9+rpi1 libglib2.0-0_2.78.3-1 libgmp10_2:6.3.0+dfsg-2 libgnutls30_3.8.2-1 libgomp1_13.2.0-9+rpi1 libgpg-error0_1.47-3 libgraphite2-3_1.3.14-2 libgssapi-krb5-2_1.20.1-5 libharfbuzz0b_8.0.1-1 libhogweed6_3.9.1-2 libhts3_1.18+ds-1 libhtscodecs2_1.6.0-1 libicu72_72.1-4 libidn2-0_2.3.4-1 libimagequant0_2.18.0-1 libisl23_0.26-3 libjansson4_2.14-2 libjbig0_2.1-6.1 libjpeg62-turbo_1:2.1.5-2 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libjs-jquery-ui_1.13.2+dfsg-1 libjs-sphinxdoc_7.2.6-3 libjs-underscore_1.13.4~dfsg+~1.11.4-3 libk5crypto3_1.20.1-5 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-5 libkrb5support0_1.20.1-5 libksba8_1.6.5-2 liblapack3_3.11.0-2 liblbfgsb0_3.0+dfsg.4-1 liblcms2-2_2.14-2 libldap-2.5-0_2.5.13+dfsg-5+rpi1 liblerc4_4.0.0+ds-4 liblocale-gettext-perl_1.07-6 liblz4-1_1.9.4-1+rpi1+b1 liblzma5_5.4.5-0.1 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.1.0-1 libmount1_2.39.3-6 libmpc3_1.3.1-1 libmpfr6_4.2.1-1 libncursesw6_6.4+20231209-1 libnettle8_3.9.1-2 libnghttp2-14_1.58.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-3 libnsl2_1.3.0-3 libnumber-compare-perl_0.03-3 libopenjp2-7_2.5.0-2 libp11-kit0_0.25.3-2 libpam-modules_1.5.2-9.1 libpam-modules-bin_1.5.2-9.1 libpam-runtime_1.5.2-9.1 libpam0g_1.5.2-9.1 libpcre2-8-0_10.42-4 libperl5.36_5.36.0-10 libpipeline1_1.5.7-1 libpng16-16_1.6.40-3 libpsl5_0.21.2-1+b1 libpython3-all-dev_3.11.4-5 libpython3-dev_3.11.4-5 libpython3-stdlib_3.11.4-5 libpython3.11_3.11.7-2 libpython3.11-dev_3.11.7-2 libpython3.11-minimal_3.11.7-2 libpython3.11-stdlib_3.11.7-2 libqhull-r8.0_2020.2-6 libraqm0_0.10.1-1 libreadline8_8.2-3 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg1-4 libsasl2-modules-db_2.1.28+dfsg1-4 libseccomp2_2.5.4-2+rpi1 libselinux1_3.5-1 libsemanage-common_3.5-1 libsemanage2_3.5-1 libsepol2_3.5-2 libsframe1_2.41-6+rpi1 libsharpyuv0_1.3.2-0.3 libsmartcols1_2.39.3-6 libsqlite3-0_3.44.2-1 libss2_1.47.0-2 libssh2-1_1.11.0-4 libssl3_3.1.4-2 libstdc++-12-dev_12.3.0-13+rpi1 libstdc++-13-dev_13.2.0-9+rpi1 libstdc++6_13.2.0-9+rpi1 libsub-override-perl_0.10-1 libsystemd0_254.5-1+rpi1 libtasn1-6_4.19.0-3 libtcl8.6_8.6.13+dfsg-2 libtext-charwidth-perl_0.04-11 libtext-glob-perl_0.11-3 libtext-iconv-perl_1.7-8 libtiff6_4.5.1+git230720-3 libtinfo6_6.4+20231209-1 libtirpc-common_1.3.4+ds-1 libtirpc-dev_1.3.4+ds-1 libtirpc3_1.3.4+ds-1 libtk8.6_8.6.13-2 libtool_2.4.7-7 libubsan1_13.2.0-9+rpi1 libuchardet0_0.0.8-1 libudev1_254.5-1+rpi1 libunistring5_1.1-2 libuuid1_2.39.3-6 libwebp7_1.3.2-0.3 libwebpdemux2_1.3.2-0.3 libwebpmux3_1.3.2-0.3 libx11-6_2:1.8.7-1 libx11-data_2:1.8.7-1 libxau6_1:1.0.9-1 libxcb1_1.15-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxft2_2.3.6-1 libxml2_2.9.14+dfsg-1.3 libxrender1_1:0.9.10-1.1 libxslt1.1_1.1.35-1 libxss1_1:1.2.3-1 libxxhash0_0.8.2-2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.5.6-1+rpi1 login_1:4.13+dfsg1-3 logsave_1.47.0-2 lsb-base_11.6+rpi1 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.0-3 mawk_1.3.4.20231126-1 media-types_10.1.0 mount_2.39.3-6 nano_7.2-1 ncurses-base_6.4+20231209-1 ncurses-bin_6.4+20231209-1 netbase_6.4 passwd_1:4.13+dfsg1-3 patch_2.7.6-7 perl_5.36.0-10 perl-base_5.36.0-10 perl-modules-5.36_5.36.0-10 pinentry-curses_1.2.1-3 po-debconf_1.0.21+nmu1 python-matplotlib-data_3.6.3-1 python3_3.11.4-5 python3-all_3.11.4-5 python3-all-dev_3.11.4-5 python3-appdirs_1.4.4-4 python3-attr_23.2.0-1 python3-brotli_1.1.0-2 python3-chardet_5.2.0+dfsg-1 python3-contourpy_1.0.7-1 python3-cycler_0.11.0-1 python3-dateutil_2.8.2-3 python3-debian_0.1.49 python3-decorator_5.1.1-5 python3-dev_3.11.4-5 python3-distutils_3.11.5-1 python3-fonttools_4.46.0-1 python3-fs_2.4.16-3 python3-kiwisolver_1.4.4-1 python3-lib2to3_3.11.5-1 python3-lxml_4.9.4-1 python3-lz4_4.0.2+dfsg-1+b1 python3-matplotlib_3.6.3-1 python3-minimal_3.11.4-5 python3-mpmath_1.2.1-2 python3-numpy_1:1.24.2-2 python3-packaging_23.2-1 python3-pil_10.1.0-1 python3-pil.imagetk_10.1.0-1 python3-pkg-resources_68.1.2-2 python3-pyparsing_3.1.1-1 python3-pysam_0.22.0+ds-1+rpi1 python3-scipy_1.10.1-5+rpi1 python3-setuptools_68.1.2-2 python3-six_1.16.0-4 python3-sympy_1.12-6 python3-tk_3.11.5-1 python3-tz_2023.3.post1-2 python3-ufolib2_0.16.0+dfsg1-1 python3.11_3.11.7-2 python3.11-dev_3.11.7-2 python3.11-minimal_3.11.7-2 raspbian-archive-keyring_20120528.2 readline-common_8.2-3 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 swig_4.1.0-0.3 swig4.0_4.1.0-0.3 sysvinit-utils_3.08-5 tar_1.34+dfsg-1.3 tk8.6-blt2.5_2.5.3+dfsg-7 tzdata_2023c-11 unicode-data_15.1.0-1 usr-is-merged_38 usrmerge_38 util-linux_2.39.3-6 x11-common_1:7.7+23 xz-utils_5.4.5-0.1 zlib1g_1:1.3.dfsg-3 zlib1g-dev_1:1.3.dfsg-3
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 3.0 (quilt)
Source: htseq
Binary: python3-htseq
Architecture: any
Version: 2.0.5-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Diane Trout <diane@ghic.org>, Andreas Tille <tille@debian.org>
Homepage: https://www-huber.embl.de/users/anders/HTSeq/doc/overview.html
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/htseq
Vcs-Git: https://salsa.debian.org/med-team/htseq.git
Testsuite: autopkgtest-pkg-python
Build-Depends: 2to3, debhelper-compat (= 13), dh-sequence-python3, python3-debian, python3-setuptools, python3-all-dev, python3-numpy, python3-matplotlib, python3-pysam, swig, cython3
Package-List:
python3-htseq deb python optional arch=any
Checksums-Sha1:
d2772fd4ec94c758100796793cf7ae7361a935e8 36799405 htseq_2.0.5.orig.tar.gz
ec9cb6141696c7602c4d20915188f9e706d0e87f 11204 htseq_2.0.5-1.debian.tar.xz
Checksums-Sha256:
2519675246dd1639115a76c9aacf19ab5bc5bed2f3598bf89cd97be5c0d066b3 36799405 htseq_2.0.5.orig.tar.gz
83464f266276b1ce8578ae22e2978db5b20198058f164ce2a592bb1b114b8cc9 11204 htseq_2.0.5-1.debian.tar.xz
Files:
ce61940ea41f8d6aa90ae37e1b7a78ae 36799405 htseq_2.0.5.orig.tar.gz
4f17c6e1867cf33dd9e88d2f6d50024a 11204 htseq_2.0.5-1.debian.tar.xz
-----BEGIN PGP SIGNATURE-----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=zvvM
-----END PGP SIGNATURE-----
gpgv: Signature made Fri Jan 12 05:59:53 2024 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./htseq_2.0.5-1.dsc: no acceptable signature found
dpkg-source: info: extracting htseq in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking htseq_2.0.5.orig.tar.gz
dpkg-source: info: unpacking htseq_2.0.5-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=trixie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=trixie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=124
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=trixie-staging-armhf-sbuild-0d264962-a78a-4fcc-b466-710860d6ed75
SCHROOT_UID=114
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage --sanitize-env -us -uc -mRaspbian pi5 test autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package htseq
dpkg-buildpackage: info: source version 2.0.5-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
I: pybuild base:305: python3.11 setup.py clean
/bin/sh: 1: git: not found
/usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
WARNING: The wheel package is not available.
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build' (and everything under it)
'build/bdist.linux-armv7l' does not exist -- can't clean it
'build/scripts-3.11' does not exist -- can't clean it
# setup.py creates some symlinks in clean target
# remove these links to keep source tree clean
for link in 'src' 'HTSeq' 'doc' 'scripts' 'test' ; do \
if [ -L ${link} ] ; then rm ${link} ; fi \
done
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary-arch
dh binary-arch --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:305: python3.11 setup.py config
/bin/sh: 1: git: not found
/usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
WARNING: The wheel package is not available.
running config
dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:305: /usr/bin/python3 setup.py build
/bin/sh: 1: git: not found
/usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
WARNING: The wheel package is not available.
running build
running build_py
running preprocess
Cython version 3.0.7
Deprecated command line option: -py3. Ignored, this option is no longer supported.
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq
copying HTSeq/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq
copying HTSeq/_HTSeq_internal.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq
copying HTSeq/StepVector.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq
copying HTSeq/StretchVector.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq
copying HTSeq/_version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts
copying HTSeq/scripts/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts
copying HTSeq/scripts/qa.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts
copying HTSeq/scripts/count.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts
copying HTSeq/scripts/count_with_barcodes.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts
copying HTSeq/scripts/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts
copying HTSeq/utils.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq
copying HTSeq/features.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count_features
copying HTSeq/scripts/count_features/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count_features
copying HTSeq/scripts/count_features/count_features_per_file.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count_features
copying HTSeq/scripts/count_features/reads_io_processor.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count_features
copying HTSeq/scripts/count_features/reads_stats.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count_features
running build_ext
building 'HTSeq._HTSeq' extension
creating build
creating build/temp.linux-armv7l-cpython-311
creating build/temp.linux-armv7l-cpython-311/src
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/_HTSeq.c -o build/temp.linux-armv7l-cpython-311/src/_HTSeq.o -w
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-311/src/_HTSeq.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/_HTSeq.cpython-311-arm-linux-gnueabihf.so
building 'HTSeq._StepVector' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.11 -c src/StepVector_wrap.cxx -o build/temp.linux-armv7l-cpython-311/src/StepVector_wrap.o -w
arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-311/src/StepVector_wrap.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/_StepVector.cpython-311-arm-linux-gnueabihf.so
running build_scripts
creating build/scripts-3.11
copying and adjusting scripts/htseq-qa -> build/scripts-3.11
copying and adjusting scripts/htseq-count -> build/scripts-3.11
copying and adjusting scripts/htseq-count-barcodes -> build/scripts-3.11
changing mode of build/scripts-3.11/htseq-qa from 644 to 755
changing mode of build/scripts-3.11/htseq-count from 644 to 755
changing mode of build/scripts-3.11/htseq-count-barcodes from 644 to 755
dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:305: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build; python3.11 -m unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
OK
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install --destdir=debian/python3-htseq/ -a -O--buildsystem=pybuild
I: pybuild base:305: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-htseq
/bin/sh: 1: git: not found
/usr/lib/python3/dist-packages/setuptools/__init__.py:84: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
WARNING: The wheel package is not available.
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
running preprocess
Cython version 3.0.7
Deprecated command line option: -py3. Ignored, this option is no longer supported.
copying HTSeq/StepVector.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq
copying HTSeq/_version.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq
running build_ext
building 'HTSeq._HTSeq' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/_HTSeq.c -o build/temp.linux-armv7l-cpython-311/src/_HTSeq.o -w
arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-311/src/_HTSeq.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/_HTSeq.cpython-311-arm-linux-gnueabihf.so
building 'HTSeq._StepVector' extension
arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.11 -c src/StepVector_wrap.cxx -o build/temp.linux-armv7l-cpython-311/src/StepVector_wrap.o -w
arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-311/src/StepVector_wrap.o -L/usr/lib/arm-linux-gnueabihf -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/_StepVector.cpython-311-arm-linux-gnueabihf.so
running build_scripts
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-htseq/usr
creating /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib
creating /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11
creating /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages
creating /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/_HTSeq_internal.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/StretchVector.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq
creating /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/qa.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count_with_barcodes.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/utils.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts
creating /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_features
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count_features/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_features
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count_features/count_features_per_file.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_features
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count_features/reads_io_processor.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_features
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count_features/reads_stats.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_features
creating /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_features/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/count_features/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_features/__pycache__
creating /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/scripts/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/utils.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/features.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq
creating /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/__pycache__/__init__.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/__pycache__/StepVector.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/__pycache__/StretchVector.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/__pycache__/_HTSeq_internal.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/__pycache__/utils.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/__pycache__/_version.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/__pycache__/features.cpython-311.pyc -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/StepVector.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/_version.py -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/_HTSeq.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_htseq/build/HTSeq/_StepVector.cpython-311-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/_HTSeq_internal.py to _HTSeq_internal.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/StretchVector.py to StretchVector.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/qa.py to qa.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count.py to count.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_with_barcodes.py to count_with_barcodes.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/utils.py to utils.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_features/__init__.py to __init__.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_features/count_features_per_file.py to count_features_per_file.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_features/reads_io_processor.py to reads_io_processor.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/scripts/count_features/reads_stats.py to reads_stats.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/utils.py to utils.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/features.py to features.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/StepVector.py to StepVector.cpython-311.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq/_version.py to _version.cpython-311.pyc
running install_egg_info
running egg_info
creating HTSeq.egg-info
writing HTSeq.egg-info/PKG-INFO
writing dependency_links to HTSeq.egg-info/dependency_links.txt
writing requirements to HTSeq.egg-info/requires.txt
writing top-level names to HTSeq.egg-info/top_level.txt
writing manifest file 'HTSeq.egg-info/SOURCES.txt'
reading manifest file 'HTSeq.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files found matching 'todo.txt'
adding license file 'LICENSE'
writing manifest file 'HTSeq.egg-info/SOURCES.txt'
Copying HTSeq.egg-info to /<<PKGBUILDDIR>>/debian/python3-htseq/usr/lib/python3.11/dist-packages/HTSeq-2.0.5.egg-info
Skipping SOURCES.txt
running install_scripts
creating /<<PKGBUILDDIR>>/debian/python3-htseq/usr/bin
copying build/scripts-3.11/htseq-qa -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/bin
copying build/scripts-3.11/htseq-count -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/bin
copying build/scripts-3.11/htseq-count-barcodes -> /<<PKGBUILDDIR>>/debian/python3-htseq/usr/bin
changing mode of /<<PKGBUILDDIR>>/debian/python3-htseq/usr/bin/htseq-qa to 755
changing mode of /<<PKGBUILDDIR>>/debian/python3-htseq/usr/bin/htseq-count to 755
changing mode of /<<PKGBUILDDIR>>/debian/python3-htseq/usr/bin/htseq-count-barcodes to 755
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_installman -a -O--buildsystem=pybuild
debian/rules override_dh_python3
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_python3
dh_numpy3
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installsystemduser -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
dwz: debian/python3-htseq/usr/lib/python3/dist-packages/HTSeq/_StepVector.cpython-311-arm-linux-gnueabihf.so: DWARF compression not beneficial - old size 486372 new size 488727
dwz: debian/python3-htseq/usr/lib/python3/dist-packages/HTSeq/_HTSeq.cpython-311-arm-linux-gnueabihf.so: DWARF compression not beneficial - old size 891184 new size 893165
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'python3-htseq-dbgsym' in '../python3-htseq-dbgsym_2.0.5-1_armhf.deb'.
dpkg-deb: building package 'python3-htseq' in '../python3-htseq_2.0.5-1_armhf.deb'.
dpkg-genbuildinfo --build=any -O../htseq_2.0.5-1_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian pi5 test autobuilder <root@raspbian.org> -O../htseq_2.0.5-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2024-01-17T06:46:52Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
htseq_2.0.5-1_armhf.changes:
----------------------------
Format: 1.8
Date: Fri, 12 Jan 2024 06:54:06 +0100
Source: htseq
Binary: python3-htseq python3-htseq-dbgsym
Architecture: armhf
Version: 2.0.5-1
Distribution: trixie-staging
Urgency: medium
Maintainer: Raspbian pi5 test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
python3-htseq - Python3 high-throughput genome sequencing read analysis utilities
Closes: 1046620
Changes:
htseq (2.0.5-1) unstable; urgency=medium
.
* New upstream version
* Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
* Ensure proper numpy ABI
* Fix clean target
Closes: #1046620
Checksums-Sha1:
28d8d0c4daf3635813ae11f4f451ca58301f0d94 9094 htseq_2.0.5-1_armhf.buildinfo
bffba160d8cd39efdf46d62f2518b0803d6e6ba5 1379080 python3-htseq-dbgsym_2.0.5-1_armhf.deb
dc2078928a2bc475c2d64d2392af08365c37f54b 264076 python3-htseq_2.0.5-1_armhf.deb
Checksums-Sha256:
197194db1c79b955e313027fccd43bbbbd4a5433c5c70c5ef131e5a9689eead9 9094 htseq_2.0.5-1_armhf.buildinfo
36e43a59fccd0ce1daed73ed9493878c74d2a7333aafdd1553652dfca5c0c608 1379080 python3-htseq-dbgsym_2.0.5-1_armhf.deb
7b67ab7847beca6bbff7324bf832bf63f972b219c4ee7f3f88fe783cc61b7f17 264076 python3-htseq_2.0.5-1_armhf.deb
Files:
e87c1897a449266499c99ed12acd6bc8 9094 python optional htseq_2.0.5-1_armhf.buildinfo
4c7892bc266f1ef86605b6d26398a6a3 1379080 debug optional python3-htseq-dbgsym_2.0.5-1_armhf.deb
3516c121453489fd7b28be31b49b06bc 264076 python optional python3-htseq_2.0.5-1_armhf.deb
+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: htseq
Binary: python3-htseq python3-htseq-dbgsym
Architecture: armhf
Version: 2.0.5-1
Checksums-Md5:
4c7892bc266f1ef86605b6d26398a6a3 1379080 python3-htseq-dbgsym_2.0.5-1_armhf.deb
3516c121453489fd7b28be31b49b06bc 264076 python3-htseq_2.0.5-1_armhf.deb
Checksums-Sha1:
bffba160d8cd39efdf46d62f2518b0803d6e6ba5 1379080 python3-htseq-dbgsym_2.0.5-1_armhf.deb
dc2078928a2bc475c2d64d2392af08365c37f54b 264076 python3-htseq_2.0.5-1_armhf.deb
Checksums-Sha256:
36e43a59fccd0ce1daed73ed9493878c74d2a7333aafdd1553652dfca5c0c608 1379080 python3-htseq-dbgsym_2.0.5-1_armhf.deb
7b67ab7847beca6bbff7324bf832bf63f972b219c4ee7f3f88fe783cc61b7f17 264076 python3-htseq_2.0.5-1_armhf.deb
Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Wed, 17 Jan 2024 06:46:52 +0000
Build-Path: /<<PKGBUILDDIR>>
Build-Tainted-By:
merged-usr-via-aliased-dirs
Installed-Build-Depends:
2to3 (= 3.11.4-5),
autoconf (= 2.71-3),
automake (= 1:1.16.5-1.3),
autopoint (= 0.21-14),
autotools-dev (= 20220109.1),
base-files (= 13+rpi1),
base-passwd (= 3.6.3),
bash (= 5.2.21-2),
binutils (= 2.41-6+rpi1),
binutils-arm-linux-gnueabihf (= 2.41-6+rpi1),
binutils-common (= 2.41-6+rpi1),
blt (= 2.5.3+dfsg-7),
bsdextrautils (= 2.39.3-6),
bsdutils (= 1:2.39.3-6),
build-essential (= 12.10),
bzip2 (= 1.0.8-5+b2),
coreutils (= 9.1-1),
cpp (= 4:13.2.0-1+rpi1),
cpp-12 (= 12.3.0-13+rpi1),
cpp-13 (= 13.2.0-9+rpi1),
cython3 (= 3.0.7-2),
dash (= 0.5.12-6),
debconf (= 1.5.82),
debhelper (= 13.11.9),
debianutils (= 5.14),
dh-autoreconf (= 20),
dh-python (= 6.20231223),
dh-strip-nondeterminism (= 1.13.1-1),
diffutils (= 1:3.10-1),
dpkg (= 1.22.1+rpi1),
dpkg-dev (= 1.22.1+rpi1),
dwz (= 0.15-1),
file (= 1:5.45-2),
findutils (= 4.9.0-5),
fontconfig-config (= 2.14.2-6),
fonts-dejavu-core (= 2.37-8),
fonts-dejavu-mono (= 2.37-8),
fonts-lyx (= 2.3.7-1),
g++ (= 4:13.2.0-1+rpi1),
g++-13 (= 13.2.0-9+rpi1),
gcc (= 4:13.2.0-1+rpi1),
gcc-12 (= 12.3.0-13+rpi1),
gcc-12-base (= 12.3.0-13+rpi1),
gcc-13 (= 13.2.0-9+rpi1),
gcc-13-base (= 13.2.0-9+rpi1),
gettext (= 0.21-14),
gettext-base (= 0.21-14),
grep (= 3.11-3),
groff-base (= 1.23.0-3),
gzip (= 1.12-1),
hostname (= 3.23+nmu1),
init-system-helpers (= 1.66),
intltool-debian (= 0.35.0+20060710.6),
libacl1 (= 2.3.1-3),
libarchive-zip-perl (= 1.68-1),
libasan8 (= 13.2.0-9+rpi1),
libatomic1 (= 13.2.0-9+rpi1),
libattr1 (= 1:2.5.1-4),
libaudit-common (= 1:3.1.2-1),
libaudit1 (= 1:3.1.2-1),
libbinutils (= 2.41-6+rpi1),
libblas3 (= 3.11.0-2),
libblkid1 (= 2.39.3-6),
libbrotli1 (= 1.1.0-2),
libbsd0 (= 0.11.8-1),
libbz2-1.0 (= 1.0.8-5+b2),
libc-bin (= 2.37-12+rpi2),
libc-dev-bin (= 2.37-12+rpi2),
libc6 (= 2.37-12+rpi2),
libc6-dev (= 2.37-12+rpi2),
libcap-ng0 (= 0.8.3-3),
libcap2 (= 1:2.66-4),
libcc1-0 (= 13.2.0-9+rpi1),
libcom-err2 (= 1.47.0-2),
libcrypt-dev (= 1:4.4.36-2),
libcrypt1 (= 1:4.4.36-2),
libctf-nobfd0 (= 2.41-6+rpi1),
libctf0 (= 2.41-6+rpi1),
libcurl3-gnutls (= 8.5.0-2+rpi1),
libdb5.3 (= 5.3.28+dfsg2-4),
libdebconfclient0 (= 0.271),
libdebhelper-perl (= 13.11.9),
libdeflate0 (= 1.18-1),
libdpkg-perl (= 1.22.1+rpi1),
libelf1 (= 0.188-2.1+rpi1),
libexpat1 (= 2.5.0-2),
libexpat1-dev (= 2.5.0-2),
libffi8 (= 3.4.4-2),
libfile-find-rule-perl (= 0.34-3),
libfile-stripnondeterminism-perl (= 1.13.1-1),
libfontconfig1 (= 2.14.2-6),
libfreetype6 (= 2.13.2+dfsg-1),
libfribidi0 (= 1.0.13-3),
libgcc-12-dev (= 12.3.0-13+rpi1),
libgcc-13-dev (= 13.2.0-9+rpi1),
libgcc-s1 (= 13.2.0-9+rpi1),
libgcrypt20 (= 1.10.3-2),
libgdbm-compat4 (= 1.23-5),
libgdbm6 (= 1.23-5),
libgfortran5 (= 13.2.0-9+rpi1),
libglib2.0-0 (= 2.78.3-1),
libgmp10 (= 2:6.3.0+dfsg-2),
libgnutls30 (= 3.8.2-1),
libgomp1 (= 13.2.0-9+rpi1),
libgpg-error0 (= 1.47-3),
libgraphite2-3 (= 1.3.14-2),
libgssapi-krb5-2 (= 1.20.1-5),
libharfbuzz0b (= 8.0.1-1),
libhogweed6 (= 3.9.1-2),
libhts3 (= 1.18+ds-1),
libhtscodecs2 (= 1.6.0-1),
libicu72 (= 72.1-4),
libidn2-0 (= 2.3.4-1),
libimagequant0 (= 2.18.0-1),
libisl23 (= 0.26-3),
libjansson4 (= 2.14-2),
libjbig0 (= 2.1-6.1),
libjpeg62-turbo (= 1:2.1.5-2),
libjs-jquery (= 3.6.1+dfsg+~3.5.14-1),
libjs-jquery-ui (= 1.13.2+dfsg-1),
libjs-sphinxdoc (= 7.2.6-3),
libjs-underscore (= 1.13.4~dfsg+~1.11.4-3),
libk5crypto3 (= 1.20.1-5),
libkeyutils1 (= 1.6.3-2),
libkrb5-3 (= 1.20.1-5),
libkrb5support0 (= 1.20.1-5),
liblapack3 (= 3.11.0-2),
liblbfgsb0 (= 3.0+dfsg.4-1),
liblcms2-2 (= 2.14-2),
libldap-2.5-0 (= 2.5.13+dfsg-5+rpi1),
liblerc4 (= 4.0.0+ds-4),
liblz4-1 (= 1.9.4-1+rpi1+b1),
liblzma5 (= 5.4.5-0.1),
libmagic-mgc (= 1:5.45-2),
libmagic1 (= 1:5.45-2),
libmd0 (= 1.1.0-1),
libmount1 (= 2.39.3-6),
libmpc3 (= 1.3.1-1),
libmpfr6 (= 4.2.1-1),
libncursesw6 (= 6.4+20231209-1),
libnettle8 (= 3.9.1-2),
libnghttp2-14 (= 1.58.0-1),
libnsl-dev (= 1.3.0-3),
libnsl2 (= 1.3.0-3),
libnumber-compare-perl (= 0.03-3),
libopenjp2-7 (= 2.5.0-2),
libp11-kit0 (= 0.25.3-2),
libpam-modules (= 1.5.2-9.1),
libpam-modules-bin (= 1.5.2-9.1),
libpam-runtime (= 1.5.2-9.1),
libpam0g (= 1.5.2-9.1),
libpcre2-8-0 (= 10.42-4),
libperl5.36 (= 5.36.0-10),
libpipeline1 (= 1.5.7-1),
libpng16-16 (= 1.6.40-3),
libpsl5 (= 0.21.2-1+b1),
libpython3-all-dev (= 3.11.4-5),
libpython3-dev (= 3.11.4-5),
libpython3-stdlib (= 3.11.4-5),
libpython3.11 (= 3.11.7-2),
libpython3.11-dev (= 3.11.7-2),
libpython3.11-minimal (= 3.11.7-2),
libpython3.11-stdlib (= 3.11.7-2),
libqhull-r8.0 (= 2020.2-6),
libraqm0 (= 0.10.1-1),
libreadline8 (= 8.2-3),
librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2),
libsasl2-2 (= 2.1.28+dfsg1-4),
libsasl2-modules-db (= 2.1.28+dfsg1-4),
libseccomp2 (= 2.5.4-2+rpi1),
libselinux1 (= 3.5-1),
libsframe1 (= 2.41-6+rpi1),
libsharpyuv0 (= 1.3.2-0.3),
libsmartcols1 (= 2.39.3-6),
libsqlite3-0 (= 3.44.2-1),
libssh2-1 (= 1.11.0-4),
libssl3 (= 3.1.4-2),
libstdc++-13-dev (= 13.2.0-9+rpi1),
libstdc++6 (= 13.2.0-9+rpi1),
libsub-override-perl (= 0.10-1),
libsystemd0 (= 254.5-1+rpi1),
libtasn1-6 (= 4.19.0-3),
libtcl8.6 (= 8.6.13+dfsg-2),
libtext-glob-perl (= 0.11-3),
libtiff6 (= 4.5.1+git230720-3),
libtinfo6 (= 6.4+20231209-1),
libtirpc-common (= 1.3.4+ds-1),
libtirpc-dev (= 1.3.4+ds-1),
libtirpc3 (= 1.3.4+ds-1),
libtk8.6 (= 8.6.13-2),
libtool (= 2.4.7-7),
libubsan1 (= 13.2.0-9+rpi1),
libuchardet0 (= 0.0.8-1),
libudev1 (= 254.5-1+rpi1),
libunistring5 (= 1.1-2),
libuuid1 (= 2.39.3-6),
libwebp7 (= 1.3.2-0.3),
libwebpdemux2 (= 1.3.2-0.3),
libwebpmux3 (= 1.3.2-0.3),
libx11-6 (= 2:1.8.7-1),
libx11-data (= 2:1.8.7-1),
libxau6 (= 1:1.0.9-1),
libxcb1 (= 1.15-1),
libxdmcp6 (= 1:1.1.2-3),
libxext6 (= 2:1.3.4-1),
libxft2 (= 2.3.6-1),
libxml2 (= 2.9.14+dfsg-1.3),
libxrender1 (= 1:0.9.10-1.1),
libxslt1.1 (= 1.1.35-1),
libxss1 (= 1:1.2.3-1),
libzstd1 (= 1.5.5+dfsg2-2),
linux-libc-dev (= 6.5.6-1+rpi1),
login (= 1:4.13+dfsg1-3),
lsb-base (= 11.6+rpi1),
m4 (= 1.4.19-4),
make (= 4.3-4.1),
man-db (= 2.12.0-3),
mawk (= 1.3.4.20231126-1),
media-types (= 10.1.0),
ncurses-base (= 6.4+20231209-1),
ncurses-bin (= 6.4+20231209-1),
netbase (= 6.4),
patch (= 2.7.6-7),
perl (= 5.36.0-10),
perl-base (= 5.36.0-10),
perl-modules-5.36 (= 5.36.0-10),
po-debconf (= 1.0.21+nmu1),
python-matplotlib-data (= 3.6.3-1),
python3 (= 3.11.4-5),
python3-all (= 3.11.4-5),
python3-all-dev (= 3.11.4-5),
python3-appdirs (= 1.4.4-4),
python3-attr (= 23.2.0-1),
python3-brotli (= 1.1.0-2),
python3-chardet (= 5.2.0+dfsg-1),
python3-contourpy (= 1.0.7-1),
python3-cycler (= 0.11.0-1),
python3-dateutil (= 2.8.2-3),
python3-debian (= 0.1.49),
python3-decorator (= 5.1.1-5),
python3-dev (= 3.11.4-5),
python3-distutils (= 3.11.5-1),
python3-fonttools (= 4.46.0-1),
python3-fs (= 2.4.16-3),
python3-kiwisolver (= 1.4.4-1),
python3-lib2to3 (= 3.11.5-1),
python3-lxml (= 4.9.4-1),
python3-lz4 (= 4.0.2+dfsg-1+b1),
python3-matplotlib (= 3.6.3-1),
python3-minimal (= 3.11.4-5),
python3-mpmath (= 1.2.1-2),
python3-numpy (= 1:1.24.2-2),
python3-packaging (= 23.2-1),
python3-pil (= 10.1.0-1),
python3-pil.imagetk (= 10.1.0-1),
python3-pkg-resources (= 68.1.2-2),
python3-pyparsing (= 3.1.1-1),
python3-pysam (= 0.22.0+ds-1+rpi1),
python3-scipy (= 1.10.1-5+rpi1),
python3-setuptools (= 68.1.2-2),
python3-six (= 1.16.0-4),
python3-sympy (= 1.12-6),
python3-tk (= 3.11.5-1),
python3-tz (= 2023.3.post1-2),
python3-ufolib2 (= 0.16.0+dfsg1-1),
python3.11 (= 3.11.7-2),
python3.11-dev (= 3.11.7-2),
python3.11-minimal (= 3.11.7-2),
readline-common (= 8.2-3),
rpcsvc-proto (= 1.4.3-1),
sed (= 4.9-1),
sensible-utils (= 0.0.20),
swig (= 4.1.0-0.3),
swig4.0 (= 4.1.0-0.3),
sysvinit-utils (= 3.08-5),
tar (= 1.34+dfsg-1.3),
tk8.6-blt2.5 (= 2.5.3+dfsg-7),
tzdata (= 2023c-11),
unicode-data (= 15.1.0-1),
usr-is-merged (= 38),
usrmerge (= 38),
util-linux (= 2.39.3-6),
x11-common (= 1:7.7+23),
xz-utils (= 5.4.5-0.1),
zlib1g (= 1:1.3.dfsg-3),
zlib1g-dev (= 1:1.3.dfsg-3)
Environment:
DEB_BUILD_OPTIONS="parallel=4"
LANG="en_GB.UTF-8"
LC_ALL="C.UTF-8"
LC_COLLATE="C.UTF-8"
SOURCE_DATE_EPOCH="1705038846"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
python3-htseq-dbgsym_2.0.5-1_armhf.deb
--------------------------------------
new Debian package, version 2.0.
size 1379080 bytes: control archive=652 bytes.
428 bytes, 12 lines control
305 bytes, 3 lines md5sums
Package: python3-htseq-dbgsym
Source: htseq
Version: 2.0.5-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1457
Depends: python3-htseq (= 2.0.5-1)
Section: debug
Priority: optional
Description: debug symbols for python3-htseq
Build-Ids: 715bc978e3553d2ec3651c3656d10e263ec04a85 c95ff76237f1ffcaff3811ada60bfffaac5b740c
drwxr-xr-x root/root 0 2024-01-12 05:54 ./
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/debug/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/debug/.build-id/71/
-rw-r--r-- root/root 1183812 2024-01-12 05:54 ./usr/lib/debug/.build-id/71/5bc978e3553d2ec3651c3656d10e263ec04a85.debug
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/debug/.build-id/c9/
-rw-r--r-- root/root 290716 2024-01-12 05:54 ./usr/lib/debug/.build-id/c9/5ff76237f1ffcaff3811ada60bfffaac5b740c.debug
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root 2964 2024-01-12 05:54 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/python3-htseq.debug
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/share/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/share/doc/
lrwxrwxrwx root/root 0 2024-01-12 05:54 ./usr/share/doc/python3-htseq-dbgsym -> python3-htseq
python3-htseq_2.0.5-1_armhf.deb
-------------------------------
new Debian package, version 2.0.
size 264076 bytes: control archive=2080 bytes.
1077 bytes, 24 lines control
2642 bytes, 30 lines md5sums
273 bytes, 12 lines * postinst #!/bin/sh
386 bytes, 12 lines * prerm #!/bin/sh
Package: python3-htseq
Source: htseq
Version: 2.0.5-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 929
Depends: python3 (<< 3.12), python3 (>= 3.11~), python3-numpy (>= 1:1.22.0), python3-numpy-abi9, python3-pysam, python3:any, libc6 (>= 2.4), libgcc-s1 (>= 3.5), libstdc++6 (>= 13.1)
Provides: python-htseq
Section: python
Priority: optional
Homepage: https://www-huber.embl.de/users/anders/HTSeq/doc/overview.html
Description: Python3 high-throughput genome sequencing read analysis utilities
HTSeq can be used to performing a number of common analysis tasks
when working with high-throughput genome sequencing reads:
.
* Getting statistical summaries about the base-call quality scores to
study the data quality.
* Calculating a coverage vector and exporting it for visualization in
a genome browser.
* Reading in annotation data from a GFF file.
* Assigning aligned reads from an RNA-Seq experiments to exons and
genes.
.
This package contains the Python 3 module.
drwxr-xr-x root/root 0 2024-01-12 05:54 ./
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/bin/
-rwxr-xr-x root/root 75 2024-01-12 05:54 ./usr/bin/htseq-count
-rwxr-xr-x root/root 103 2024-01-12 05:54 ./usr/bin/htseq-count-barcodes
-rwxr-xr-x root/root 69 2024-01-12 05:54 ./usr/bin/htseq-qa
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/python3/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq-2.0.5.egg-info/
-rw-r--r-- root/root 3542 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq-2.0.5.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq-2.0.5.egg-info/dependency_links.txt
-rw-r--r-- root/root 93 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq-2.0.5.egg-info/requires.txt
-rw-r--r-- root/root 6 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq-2.0.5.egg-info/top_level.txt
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq/
-rw-r--r-- root/root 25180 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq/StepVector.py
-rw-r--r-- root/root 17874 2023-06-28 13:11 ./usr/lib/python3/dist-packages/HTSeq/StretchVector.py
-rw-r--r-- root/root 578308 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq/_HTSeq.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 3486 2023-06-28 13:11 ./usr/lib/python3/dist-packages/HTSeq/_HTSeq_internal.py
-rw-r--r-- root/root 119924 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq/_StepVector.cpython-311-arm-linux-gnueabihf.so
-rw-r--r-- root/root 40518 2023-06-28 13:11 ./usr/lib/python3/dist-packages/HTSeq/__init__.py
-rw-r--r-- root/root 21 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq/_version.py
-rw-r--r-- root/root 16742 2023-12-12 22:03 ./usr/lib/python3/dist-packages/HTSeq/features.py
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq/scripts/
-rw-r--r-- root/root 0 2023-06-28 13:11 ./usr/lib/python3/dist-packages/HTSeq/scripts/__init__.py
-rw-r--r-- root/root 16683 2023-12-12 22:03 ./usr/lib/python3/dist-packages/HTSeq/scripts/count.py
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/lib/python3/dist-packages/HTSeq/scripts/count_features/
-rw-r--r-- root/root 0 2023-06-28 13:11 ./usr/lib/python3/dist-packages/HTSeq/scripts/count_features/__init__.py
-rw-r--r-- root/root 15773 2023-08-01 04:54 ./usr/lib/python3/dist-packages/HTSeq/scripts/count_features/count_features_per_file.py
-rw-r--r-- root/root 6364 2023-08-01 04:54 ./usr/lib/python3/dist-packages/HTSeq/scripts/count_features/reads_io_processor.py
-rw-r--r-- root/root 2799 2023-06-28 13:11 ./usr/lib/python3/dist-packages/HTSeq/scripts/count_features/reads_stats.py
-rw-r--r-- root/root 27575 2023-12-12 22:03 ./usr/lib/python3/dist-packages/HTSeq/scripts/count_with_barcodes.py
-rw-r--r-- root/root 10427 2023-06-28 13:11 ./usr/lib/python3/dist-packages/HTSeq/scripts/qa.py
-rw-r--r-- root/root 10418 2023-06-28 13:11 ./usr/lib/python3/dist-packages/HTSeq/scripts/utils.py
-rw-r--r-- root/root 2888 2023-06-28 13:11 ./usr/lib/python3/dist-packages/HTSeq/utils.py
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/share/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/share/doc/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/share/doc/python3-htseq/
-rw-r--r-- root/root 901 2024-01-12 05:54 ./usr/share/doc/python3-htseq/changelog.Debian.gz
-rw-r--r-- root/root 7361 2023-12-12 22:06 ./usr/share/doc/python3-htseq/changelog.gz
-rw-r--r-- root/root 959 2024-01-12 05:54 ./usr/share/doc/python3-htseq/copyright
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/share/man/
drwxr-xr-x root/root 0 2024-01-12 05:54 ./usr/share/man/man1/
-rw-r--r-- root/root 5662 2024-01-12 05:54 ./usr/share/man/man1/htseq-count.1.gz
-rw-r--r-- root/root 1994 2024-01-12 05:54 ./usr/share/man/man1/htseq-qa.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build Type: any
Build-Space: 109172
Build-Time: 120
Distribution: trixie-staging
Host Architecture: armhf
Install-Time: 169
Job: htseq_2.0.5-1
Machine Architecture: arm64
Package: htseq
Package-Time: 303
Source-Version: 2.0.5-1
Space: 109172
Status: successful
Version: 2.0.5-1
--------------------------------------------------------------------------------
Finished at 2024-01-17T06:46:52Z
Build needed 00:05:03, 109172k disk space