Raspbian Package Auto-Building

Build log for gerris (20131206+dfsg-19) on armhf

gerris20131206+dfsg-19armhf → 2020-02-16 12:19:13

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-04

+==============================================================================+
| gerris 20131206+dfsg-19 (armhf)              Sun, 16 Feb 2020 11:34:38 +0000 |
+==============================================================================+

Package: gerris
Version: 20131206+dfsg-19
Source Version: 20131206+dfsg-19
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-d6944535-bf4c-488b-8b43-da596edd2f09' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.5 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.7 MB]
Fetched 24.2 MB in 26s (917 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'gerris' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/science-team/gerris.git
Please use:
git clone https://salsa.debian.org/science-team/gerris.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 2863 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main gerris 20131206+dfsg-19 (dsc) [2350 B]
Get:2 http://172.17.0.1/private bullseye-staging/main gerris 20131206+dfsg-19 (tar) [2834 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main gerris 20131206+dfsg-19 (diff) [26.9 kB]
Fetched 2863 kB in 0s (8653 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/gerris-nx9yM6/gerris-20131206+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/gerris-nx9yM6' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-zmHG82/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-zmHG82/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-zmHG82/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (2879 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 7 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12214 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 12), dh-exec, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python3
Filtered Build-Depends: debhelper-compat (= 12), dh-exec, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python3
dpkg-deb: building package 'sbuild-build-depends-gerris-dummy' in '/<<BUILDDIR>>/resolver-zmHG82/apt_archive/sbuild-build-depends-gerris-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-gerris-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ Sources [569 B]
Get:5 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ Packages [654 B]
Fetched 2556 B in 1s (3261 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install gerris build dependencies (apt-based resolver)
------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-exec dh-strip-nondeterminism dwz file gettext gettext-base
  gfortran gfortran-9 groff-base hdf5-helpers ibverbs-providers
  intltool-debian libaec-dev libaec0 libarchive-zip-perl libblkid-dev
  libbrotli1 libbsd0 libcroco3 libcurl3-gnutls libcurl4-gnutls-dev
  libdebhelper-perl libedit2 libelf1 libevent-2.1-7 libevent-core-2.1-7
  libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7
  libevent-pthreads-2.1-7 libexpat1 libffi-dev
  libfile-stripnondeterminism-perl libgfortran-9-dev libgfortran5 libglib2.0-0
  libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libgsl-dev
  libgsl23 libgslcblas0 libgssapi-krb5-2 libgts-0.7-5 libgts-bin libgts-dev
  libhdf5-103 libhdf5-cpp-103 libhdf5-dev libhwloc-dev libhwloc-plugins
  libhwloc15 libibverbs-dev libibverbs1 libicu63 libjpeg-dev libjpeg62-turbo
  libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
  libltdl-dev libltdl7 libmagic-mgc libmagic1 libmount-dev libmpdec2
  libnetcdf-dev libnetcdf15 libnghttp2-14 libnl-3-200 libnl-3-dev
  libnl-route-3-200 libnl-route-3-dev libopenmpi-dev libopenmpi3 libpciaccess0
  libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix2
  libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpmix2 libpsl5
  libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib librtmp1
  libselinux1-dev libsepol1-dev libsigsegv2 libssh2-1 libssl1.1
  libsub-override-perl libsz2 libtinfo5 libtool libuchardet0 libx11-6
  libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 m4 man-db
  mime-support mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common
  openssh-client pkg-config po-debconf python3 python3-distutils
  python3-lib2to3 python3-minimal python3.7 python3.7-minimal sensible-utils
  uuid-dev zlib1g zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-doc
  gfortran-9-doc libcoarrays-dev groff libcurl4-doc libgnutls28-dev
  libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev
  libgirepository1.0-dev libglib2.0-doc libgdk-pixbuf2.0-bin
  | libgdk-pixbuf2.0-dev libxml2-utils gsl-ref-psdoc | gsl-doc-pdf
  | gsl-doc-info | gsl-ref-html krb5-doc krb5-user libgts-doc libhdf5-doc
  libtool-doc netcdf-bin netcdf-doc openmpi-doc pciutils gcj-jdk m4-doc
  apparmor less www-browser opencl-icd keychain libpam-ssh monkeysphere
  ssh-askpass libmail-box-perl python3-doc python3-tk python3-venv
  python3.7-venv python3.7-doc binfmt-support
Recommended packages:
  curl | wget | lynx ca-certificates libarchive-cpio-perl shared-mime-info
  xdg-user-dirs krb5-locales libcoarrays-openmpi-dev publicsuffix xauth
  libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-exec dh-strip-nondeterminism dwz file gettext gettext-base
  gfortran gfortran-9 groff-base hdf5-helpers ibverbs-providers
  intltool-debian libaec-dev libaec0 libarchive-zip-perl libblkid-dev
  libbrotli1 libbsd0 libcroco3 libcurl3-gnutls libcurl4-gnutls-dev
  libdebhelper-perl libedit2 libelf1 libevent-2.1-7 libevent-core-2.1-7
  libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7
  libevent-pthreads-2.1-7 libexpat1 libffi-dev
  libfile-stripnondeterminism-perl libgfortran-9-dev libgfortran5 libglib2.0-0
  libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libgsl-dev
  libgsl23 libgslcblas0 libgssapi-krb5-2 libgts-0.7-5 libgts-bin libgts-dev
  libhdf5-103 libhdf5-cpp-103 libhdf5-dev libhwloc-dev libhwloc-plugins
  libhwloc15 libibverbs-dev libibverbs1 libicu63 libjpeg-dev libjpeg62-turbo
  libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
  libltdl-dev libltdl7 libmagic-mgc libmagic1 libmount-dev libmpdec2
  libnetcdf-dev libnetcdf15 libnghttp2-14 libnl-3-200 libnl-3-dev
  libnl-route-3-200 libnl-route-3-dev libopenmpi-dev libopenmpi3 libpciaccess0
  libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix2
  libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libpmix2 libpsl5
  libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib librtmp1
  libselinux1-dev libsepol1-dev libsigsegv2 libssh2-1 libssl1.1
  libsub-override-perl libsz2 libtinfo5 libtool libuchardet0 libx11-6
  libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxnvctrl0 m4 man-db
  mime-support mpi-default-dev ocl-icd-libopencl1 openmpi-bin openmpi-common
  openssh-client pkg-config po-debconf python3 python3-distutils
  python3-lib2to3 python3-minimal python3.7 python3.7-minimal
  sbuild-build-depends-gerris-dummy sensible-utils uuid-dev zlib1g-dev
The following packages will be upgraded:
  zlib1g
1 upgraded, 139 newly installed, 0 to remove and 6 not upgraded.
Need to get 55.7 MB of archives.
After this operation, 205 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-zmHG82/apt_archive ./ sbuild-build-depends-gerris-dummy 0.invalid.0 [936 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.1+20191019-1 [316 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-4 [783 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf zlib1g armhf 1:1.2.11.dfsg-1.2 [84.6 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.0-2 [1261 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1d-2 [1268 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-minimal armhf 3.7.6-1+b1 [585 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf python3.7-minimal armhf 3.7.6-1+b1 [1525 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.7.5-3 [36.8 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.64 [37.8 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-stdlib armhf 3.7.6-1+b1 [1669 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf python3.7 armhf 3.7.6-1+b1 [351 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.7.5-3 [20.2 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.7.5-3 [62.1 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-4 [262 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-4 [112 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-4 [66.9 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20191231-1 [79.2 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-6+b1 [61.5 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-6+b1 [112 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-6+b1 [316 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-6+b1 [134 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf openssh-client armhf 1:8.1p1-5 [713 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-11 [547 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.9 [183 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.67-1 [104 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.6.3-2 [14.7 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.62.4-1+rpi1 [1137 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-2 [7974 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.4+dfsg1-8 [593 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.9 [994 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf dh-exec armhf 0.23.2+b2 [25.7 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 9.2.1-25+rpi1 [231 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-9-dev armhf 9.2.1-25+rpi1 [279 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf gfortran-9 armhf 9.2.1-25+rpi1 [8095 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:9.2.1-3.1+rpi1 [1440 B]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf hdf5-helpers armhf 1.10.4+repack-10 [35.2 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-200 armhf 3.4.0-1 [55.0 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-200 armhf 3.4.0-1 [132 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libibverbs1 armhf 27.0-2 [47.2 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf ibverbs-providers armhf 27.0-2 [24.1 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libaec0 armhf 1.0.4-1 [20.0 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libsz2 armhf 1.0.4-1 [6664 B]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libaec-dev armhf 1.0.4-1 [17.8 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf uuid-dev armhf 2.34-0.1 [92.5 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libblkid-dev armhf 2.34-0.1 [212 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6 [261 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.40.0-1+b2 [74.2 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libcurl3-gnutls armhf 7.67.0-2 [284 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libcurl4-gnutls-dev armhf 7.67.0-2 [357 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libevent-2.1-7 armhf 2.1.11-stable-1 [165 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libevent-core-2.1-7 armhf 2.1.11-stable-1 [124 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libevent-extra-2.1-7 armhf 2.1.11-stable-1 [98.7 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libevent-pthreads-2.1-7 armhf 2.1.11-stable-1 [54.7 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libevent-openssl-2.1-7 armhf 2.1.11-stable-1 [59.7 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libevent-dev armhf 2.1.11-stable-1 [279 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libffi-dev armhf 3.3-3 [57.9 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-data all 2.62.4-2 [1121 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-bin armhf 2.62.4-1+rpi1 [124 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.0-1 [78.3 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.0-1 [145 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-dev-bin armhf 2.62.4-1+rpi1 [163 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libmount-dev armhf 2.34-0.1 [212 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-12 [234 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-12 [227 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-12 [564 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libsepol1-dev armhf 3.0-1 [306 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.34-7 [181 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix2 armhf 10.34-7 [44.7 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.34-7 [614 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libselinux1-dev armhf 3.0-1 [158 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29-6 [59.8 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1.2 [203 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-dev armhf 2.62.4-1+rpi1 [1430 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libgslcblas0 armhf 2.5+dfsg-6 [79.0 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libgsl23 armhf 2.5+dfsg-6 [704 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libgsl-dev armhf 2.5+dfsg-6 [893 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [134 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libgts-bin armhf 0.7.6+darcs121130-4 [47.8 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libgts-dev armhf 0.7.6+darcs121130-4 [147 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-103 armhf 1.10.4+repack-10 [1259 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-cpp-103 armhf 1.10.4+repack-10 [121 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libhdf5-dev armhf 1.10.4+repack-10 [2221 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libltdl7 armhf 2.4.6-11 [387 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libhwloc15 armhf 2.1.0+dfsg-3+rpi1 [112 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libltdl-dev armhf 2.4.6-11 [159 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-dev armhf 2.1.0+dfsg-3+rpi1 [173 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libpciaccess0 armhf 0.14-1 [51.0 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.8-1 [298 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.8-1 [691 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libxnvctrl0 armhf 440.59-1 [25.0 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf ocl-icd-libopencl1 armhf 2.2.12-3 [35.9 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libhwloc-plugins armhf 2.1.0+dfsg-3+rpi1 [18.6 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libnl-3-dev armhf 3.4.0-1 [92.4 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libnl-route-3-dev armhf 3.4.0-1 [145 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libibverbs-dev armhf 27.0-2 [166 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf15 armhf 1:4.7.3-1 [341 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libnetcdf-dev armhf 1:4.7.3-1 [92.1 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libpmix2 armhf 3.1.4-1+b1 [370 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi3 armhf 4.0.2-5+rpi1 [1679 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf openmpi-common all 4.0.2-5+rpi1 [168 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf openmpi-bin armhf 4.0.2-5+rpi1 [185 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf libopenmpi-dev armhf 4.0.2-5+rpi1 [905 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf mpi-default-dev armhf 1.13 [5476 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 55.7 MB in 6s (9705 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 12214 files and directories currently installed.)
Preparing to unpack .../0-libbsd0_0.10.0-1_armhf.deb ...
Unpacking libbsd0:armhf (0.10.0-1) ...
Selecting previously unselected package libtinfo5:armhf.
Preparing to unpack .../1-libtinfo5_6.1+20191019-1_armhf.deb ...
Unpacking libtinfo5:armhf (6.1+20191019-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../2-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../3-libuchardet0_0.0.6-3_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.6-3) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../4-groff-base_1.22.4-4_armhf.deb ...
Unpacking groff-base (1.22.4-4) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../5-libpipeline1_1.5.2-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.2-2) ...
Preparing to unpack .../6-zlib1g_1%3a1.2.11.dfsg-1.2_armhf.deb ...
Unpacking zlib1g:armhf (1:1.2.11.dfsg-1.2) over (1:1.2.11.dfsg-1) ...
Setting up zlib1g:armhf (1:1.2.11.dfsg-1.2) ...
Selecting previously unselected package man-db.
(Reading database ... 12545 files and directories currently installed.)
Preparing to unpack .../man-db_2.9.0-2_armhf.deb ...
Unpacking man-db (2.9.0-2) ...
Selecting previously unselected package libssl1.1:armhf.
Preparing to unpack .../libssl1.1_1.1.1d-2_armhf.deb ...
Unpacking libssl1.1:armhf (1.1.1d-2) ...
Selecting previously unselected package libpython3.7-minimal:armhf.
Preparing to unpack .../libpython3.7-minimal_3.7.6-1+b1_armhf.deb ...
Unpacking libpython3.7-minimal:armhf (3.7.6-1+b1) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../libexpat1_2.2.9-1_armhf.deb ...
Unpacking libexpat1:armhf (2.2.9-1) ...
Selecting previously unselected package python3.7-minimal.
Preparing to unpack .../python3.7-minimal_3.7.6-1+b1_armhf.deb ...
Unpacking python3.7-minimal (3.7.6-1+b1) ...
Setting up libssl1.1:armhf (1.1.1d-2) ...
Setting up libpython3.7-minimal:armhf (3.7.6-1+b1) ...
Setting up libexpat1:armhf (2.2.9-1) ...
Setting up python3.7-minimal (3.7.6-1+b1) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 13136 files and directories currently installed.)
Preparing to unpack .../0-python3-minimal_3.7.5-3_armhf.deb ...
Unpacking python3-minimal (3.7.5-3) ...
Selecting previously unselected package mime-support.
Preparing to unpack .../1-mime-support_3.64_all.deb ...
Unpacking mime-support (3.64) ...
Selecting previously unselected package libmpdec2:armhf.
Preparing to unpack .../2-libmpdec2_2.4.2-2_armhf.deb ...
Unpacking libmpdec2:armhf (2.4.2-2) ...
Selecting previously unselected package libpython3.7-stdlib:armhf.
Preparing to unpack .../3-libpython3.7-stdlib_3.7.6-1+b1_armhf.deb ...
Unpacking libpython3.7-stdlib:armhf (3.7.6-1+b1) ...
Selecting previously unselected package python3.7.
Preparing to unpack .../4-python3.7_3.7.6-1+b1_armhf.deb ...
Unpacking python3.7 (3.7.6-1+b1) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../5-libpython3-stdlib_3.7.5-3_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.7.5-3) ...
Setting up python3-minimal (3.7.5-3) ...
Selecting previously unselected package python3.
(Reading database ... 13575 files and directories currently installed.)
Preparing to unpack .../000-python3_3.7.5-3_armhf.deb ...
Unpacking python3 (3.7.5-3) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../001-sensible-utils_0.0.12+nmu1_all.deb ...
Unpacking sensible-utils (0.0.12+nmu1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../002-libmagic-mgc_1%3a5.38-4_armhf.deb ...
Unpacking libmagic-mgc (1:5.38-4) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../003-libmagic1_1%3a5.38-4_armhf.deb ...
Unpacking libmagic1:armhf (1:5.38-4) ...
Selecting previously unselected package file.
Preparing to unpack .../004-file_1%3a5.38-4_armhf.deb ...
Unpacking file (1:5.38-4) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../005-gettext-base_0.19.8.1-10_armhf.deb ...
Unpacking gettext-base (0.19.8.1-10) ...
Selecting previously unselected package libedit2:armhf.
Preparing to unpack .../006-libedit2_3.1-20191231-1_armhf.deb ...
Unpacking libedit2:armhf (3.1-20191231-1) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../007-libkeyutils1_1.6.1-2_armhf.deb ...
Unpacking libkeyutils1:armhf (1.6.1-2) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../008-libkrb5support0_1.17-6+b1_armhf.deb ...
Unpacking libkrb5support0:armhf (1.17-6+b1) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../009-libk5crypto3_1.17-6+b1_armhf.deb ...
Unpacking libk5crypto3:armhf (1.17-6+b1) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../010-libkrb5-3_1.17-6+b1_armhf.deb ...
Unpacking libkrb5-3:armhf (1.17-6+b1) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../011-libgssapi-krb5-2_1.17-6+b1_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.17-6+b1) ...
Selecting previously unselected package openssh-client.
Preparing to unpack .../012-openssh-client_1%3a8.1p1-5_armhf.deb ...
Unpacking openssh-client (1:8.1p1-5) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../013-libsigsegv2_2.12-2_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../014-m4_1.4.18-4_armhf.deb ...
Unpacking m4 (1.4.18-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../015-autoconf_2.69-11.1_all.deb ...
Unpacking autoconf (2.69-11.1) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../016-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../017-automake_1%3a1.16.1-4_all.deb ...
Unpacking automake (1:1.16.1-4) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../018-autopoint_0.19.8.1-10_all.deb ...
Unpacking autopoint (0.19.8.1-10) ...
Selecting previously unselected package libtool.
Preparing to unpack .../019-libtool_2.4.6-11_all.deb ...
Unpacking libtool (2.4.6-11) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../020-dh-autoreconf_19_all.deb ...
Unpacking dh-autoreconf (19) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../021-libdebhelper-perl_12.9_all.deb ...
Unpacking libdebhelper-perl (12.9) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../022-libarchive-zip-perl_1.67-1_all.deb ...
Unpacking libarchive-zip-perl (1.67-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../023-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../024-libfile-stripnondeterminism-perl_1.6.3-2_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.6.3-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../025-dh-strip-nondeterminism_1.6.3-2_all.deb ...
Unpacking dh-strip-nondeterminism (1.6.3-2) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../026-libelf1_0.176-1.1_armhf.deb ...
Unpacking libelf1:armhf (0.176-1.1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../027-dwz_0.13-5_armhf.deb ...
Unpacking dwz (0.13-5) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../028-libglib2.0-0_2.62.4-1+rpi1_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.62.4-1+rpi1) ...
Selecting previously unselected package libicu63:armhf.
Preparing to unpack .../029-libicu63_63.2-2_armhf.deb ...
Unpacking libicu63:armhf (63.2-2) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../030-libxml2_2.9.4+dfsg1-8_armhf.deb ...
Unpacking libxml2:armhf (2.9.4+dfsg1-8) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../031-libcroco3_0.6.13-1_armhf.deb ...
Unpacking libcroco3:armhf (0.6.13-1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../032-gettext_0.19.8.1-10_armhf.deb ...
Unpacking gettext (0.19.8.1-10) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../033-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../034-po-debconf_1.0.21_all.deb ...
Unpacking po-debconf (1.0.21) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../035-debhelper_12.9_all.deb ...
Unpacking debhelper (12.9) ...
Selecting previously unselected package dh-exec.
Preparing to unpack .../036-dh-exec_0.23.2+b2_armhf.deb ...
Unpacking dh-exec (0.23.2+b2) ...
Selecting previously unselected package libgfortran5:armhf.
Preparing to unpack .../037-libgfortran5_9.2.1-25+rpi1_armhf.deb ...
Unpacking libgfortran5:armhf (9.2.1-25+rpi1) ...
Selecting previously unselected package libgfortran-9-dev:armhf.
Preparing to unpack .../038-libgfortran-9-dev_9.2.1-25+rpi1_armhf.deb ...
Unpacking libgfortran-9-dev:armhf (9.2.1-25+rpi1) ...
Selecting previously unselected package gfortran-9.
Preparing to unpack .../039-gfortran-9_9.2.1-25+rpi1_armhf.deb ...
Unpacking gfortran-9 (9.2.1-25+rpi1) ...
Selecting previously unselected package gfortran.
Preparing to unpack .../040-gfortran_4%3a9.2.1-3.1+rpi1_armhf.deb ...
Unpacking gfortran (4:9.2.1-3.1+rpi1) ...
Selecting previously unselected package hdf5-helpers.
Preparing to unpack .../041-hdf5-helpers_1.10.4+repack-10_armhf.deb ...
Unpacking hdf5-helpers (1.10.4+repack-10) ...
Selecting previously unselected package libnl-3-200:armhf.
Preparing to unpack .../042-libnl-3-200_3.4.0-1_armhf.deb ...
Unpacking libnl-3-200:armhf (3.4.0-1) ...
Selecting previously unselected package libnl-route-3-200:armhf.
Preparing to unpack .../043-libnl-route-3-200_3.4.0-1_armhf.deb ...
Unpacking libnl-route-3-200:armhf (3.4.0-1) ...
Selecting previously unselected package libibverbs1:armhf.
Preparing to unpack .../044-libibverbs1_27.0-2_armhf.deb ...
Unpacking libibverbs1:armhf (27.0-2) ...
Selecting previously unselected package ibverbs-providers:armhf.
Preparing to unpack .../045-ibverbs-providers_27.0-2_armhf.deb ...
Unpacking ibverbs-providers:armhf (27.0-2) ...
Selecting previously unselected package libaec0:armhf.
Preparing to unpack .../046-libaec0_1.0.4-1_armhf.deb ...
Unpacking libaec0:armhf (1.0.4-1) ...
Selecting previously unselected package libsz2:armhf.
Preparing to unpack .../047-libsz2_1.0.4-1_armhf.deb ...
Unpacking libsz2:armhf (1.0.4-1) ...
Selecting previously unselected package libaec-dev:armhf.
Preparing to unpack .../048-libaec-dev_1.0.4-1_armhf.deb ...
Unpacking libaec-dev:armhf (1.0.4-1) ...
Selecting previously unselected package uuid-dev:armhf.
Preparing to unpack .../049-uuid-dev_2.34-0.1_armhf.deb ...
Unpacking uuid-dev:armhf (2.34-0.1) ...
Selecting previously unselected package libblkid-dev:armhf.
Preparing to unpack .../050-libblkid-dev_2.34-0.1_armhf.deb ...
Unpacking libblkid-dev:armhf (2.34-0.1) ...
Selecting previously unselected package libbrotli1:armhf.
Preparing to unpack .../051-libbrotli1_1.0.7-6_armhf.deb ...
Unpacking libbrotli1:armhf (1.0.7-6) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../052-libnghttp2-14_1.40.0-1+b2_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.40.0-1+b2) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../053-libpsl5_0.20.2-2_armhf.deb ...
Unpacking libpsl5:armhf (0.20.2-2) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../054-librtmp1_2.4+20151223.gitfa8646d.1-2+b1_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../055-libssh2-1_1.8.0-2.1_armhf.deb ...
Unpacking libssh2-1:armhf (1.8.0-2.1) ...
Selecting previously unselected package libcurl3-gnutls:armhf.
Preparing to unpack .../056-libcurl3-gnutls_7.67.0-2_armhf.deb ...
Unpacking libcurl3-gnutls:armhf (7.67.0-2) ...
Selecting previously unselected package libcurl4-gnutls-dev:armhf.
Preparing to unpack .../057-libcurl4-gnutls-dev_7.67.0-2_armhf.deb ...
Unpacking libcurl4-gnutls-dev:armhf (7.67.0-2) ...
Selecting previously unselected package libevent-2.1-7:armhf.
Preparing to unpack .../058-libevent-2.1-7_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-2.1-7:armhf (2.1.11-stable-1) ...
Selecting previously unselected package libevent-core-2.1-7:armhf.
Preparing to unpack .../059-libevent-core-2.1-7_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-core-2.1-7:armhf (2.1.11-stable-1) ...
Selecting previously unselected package libevent-extra-2.1-7:armhf.
Preparing to unpack .../060-libevent-extra-2.1-7_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-extra-2.1-7:armhf (2.1.11-stable-1) ...
Selecting previously unselected package libevent-pthreads-2.1-7:armhf.
Preparing to unpack .../061-libevent-pthreads-2.1-7_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-pthreads-2.1-7:armhf (2.1.11-stable-1) ...
Selecting previously unselected package libevent-openssl-2.1-7:armhf.
Preparing to unpack .../062-libevent-openssl-2.1-7_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-openssl-2.1-7:armhf (2.1.11-stable-1) ...
Selecting previously unselected package libevent-dev.
Preparing to unpack .../063-libevent-dev_2.1.11-stable-1_armhf.deb ...
Unpacking libevent-dev (2.1.11-stable-1) ...
Selecting previously unselected package libffi-dev:armhf.
Preparing to unpack .../064-libffi-dev_3.3-3_armhf.deb ...
Unpacking libffi-dev:armhf (3.3-3) ...
Selecting previously unselected package libglib2.0-data.
Preparing to unpack .../065-libglib2.0-data_2.62.4-2_all.deb ...
Unpacking libglib2.0-data (2.62.4-2) ...
Selecting previously unselected package libglib2.0-bin.
Preparing to unpack .../066-libglib2.0-bin_2.62.4-1+rpi1_armhf.deb ...
Unpacking libglib2.0-bin (2.62.4-1+rpi1) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../067-python3-lib2to3_3.8.0-1_all.deb ...
Unpacking python3-lib2to3 (3.8.0-1) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../068-python3-distutils_3.8.0-1_all.deb ...
Unpacking python3-distutils (3.8.0-1) ...
Selecting previously unselected package libglib2.0-dev-bin.
Preparing to unpack .../069-libglib2.0-dev-bin_2.62.4-1+rpi1_armhf.deb ...
Unpacking libglib2.0-dev-bin (2.62.4-1+rpi1) ...
Selecting previously unselected package libmount-dev:armhf.
Preparing to unpack .../070-libmount-dev_2.34-0.1_armhf.deb ...
Unpacking libmount-dev:armhf (2.34-0.1) ...
Selecting previously unselected package libpcre16-3:armhf.
Preparing to unpack .../071-libpcre16-3_2%3a8.39-12_armhf.deb ...
Unpacking libpcre16-3:armhf (2:8.39-12) ...
Selecting previously unselected package libpcre32-3:armhf.
Preparing to unpack .../072-libpcre32-3_2%3a8.39-12_armhf.deb ...
Unpacking libpcre32-3:armhf (2:8.39-12) ...
Selecting previously unselected package libpcrecpp0v5:armhf.
Preparing to unpack .../073-libpcrecpp0v5_2%3a8.39-12_armhf.deb ...
Unpacking libpcrecpp0v5:armhf (2:8.39-12) ...
Selecting previously unselected package libpcre3-dev:armhf.
Preparing to unpack .../074-libpcre3-dev_2%3a8.39-12_armhf.deb ...
Unpacking libpcre3-dev:armhf (2:8.39-12) ...
Selecting previously unselected package libsepol1-dev:armhf.
Preparing to unpack .../075-libsepol1-dev_3.0-1_armhf.deb ...
Unpacking libsepol1-dev:armhf (3.0-1) ...
Selecting previously unselected package libpcre2-16-0:armhf.
Preparing to unpack .../076-libpcre2-16-0_10.34-7_armhf.deb ...
Unpacking libpcre2-16-0:armhf (10.34-7) ...
Selecting previously unselected package libpcre2-32-0:armhf.
Preparing to unpack .../077-libpcre2-32-0_10.34-7_armhf.deb ...
Unpacking libpcre2-32-0:armhf (10.34-7) ...
Selecting previously unselected package libpcre2-posix2:armhf.
Preparing to unpack .../078-libpcre2-posix2_10.34-7_armhf.deb ...
Unpacking libpcre2-posix2:armhf (10.34-7) ...
Selecting previously unselected package libpcre2-dev:armhf.
Preparing to unpack .../079-libpcre2-dev_10.34-7_armhf.deb ...
Unpacking libpcre2-dev:armhf (10.34-7) ...
Selecting previously unselected package libselinux1-dev:armhf.
Preparing to unpack .../080-libselinux1-dev_3.0-1_armhf.deb ...
Unpacking libselinux1-dev:armhf (3.0-1) ...
Selecting previously unselected package pkg-config.
Preparing to unpack .../081-pkg-config_0.29-6_armhf.deb ...
Unpacking pkg-config (0.29-6) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../082-zlib1g-dev_1%3a1.2.11.dfsg-1.2_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-1.2) ...
Selecting previously unselected package libglib2.0-dev:armhf.
Preparing to unpack .../083-libglib2.0-dev_2.62.4-1+rpi1_armhf.deb ...
Unpacking libglib2.0-dev:armhf (2.62.4-1+rpi1) ...
Selecting previously unselected package libgslcblas0:armhf.
Preparing to unpack .../084-libgslcblas0_2.5+dfsg-6_armhf.deb ...
Unpacking libgslcblas0:armhf (2.5+dfsg-6) ...
Selecting previously unselected package libgsl23:armhf.
Preparing to unpack .../085-libgsl23_2.5+dfsg-6_armhf.deb ...
Unpacking libgsl23:armhf (2.5+dfsg-6) ...
Selecting previously unselected package libgsl-dev.
Preparing to unpack .../086-libgsl-dev_2.5+dfsg-6_armhf.deb ...
Unpacking libgsl-dev (2.5+dfsg-6) ...
Selecting previously unselected package libgts-0.7-5:armhf.
Preparing to unpack .../087-libgts-0.7-5_0.7.6+darcs121130-4_armhf.deb ...
Unpacking libgts-0.7-5:armhf (0.7.6+darcs121130-4) ...
Selecting previously unselected package libgts-bin.
Preparing to unpack .../088-libgts-bin_0.7.6+darcs121130-4_armhf.deb ...
Unpacking libgts-bin (0.7.6+darcs121130-4) ...
Selecting previously unselected package libgts-dev:armhf.
Preparing to unpack .../089-libgts-dev_0.7.6+darcs121130-4_armhf.deb ...
Unpacking libgts-dev:armhf (0.7.6+darcs121130-4) ...
Selecting previously unselected package libhdf5-103:armhf.
Preparing to unpack .../090-libhdf5-103_1.10.4+repack-10_armhf.deb ...
Unpacking libhdf5-103:armhf (1.10.4+repack-10) ...
Selecting previously unselected package libhdf5-cpp-103:armhf.
Preparing to unpack .../091-libhdf5-cpp-103_1.10.4+repack-10_armhf.deb ...
Unpacking libhdf5-cpp-103:armhf (1.10.4+repack-10) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../092-libjpeg62-turbo_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package libjpeg62-turbo-dev:armhf.
Preparing to unpack .../093-libjpeg62-turbo-dev_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package libjpeg-dev.
Preparing to unpack .../094-libjpeg-dev_1%3a1.5.2-2_all.deb ...
Unpacking libjpeg-dev (1:1.5.2-2) ...
Selecting previously unselected package libhdf5-dev.
Preparing to unpack .../095-libhdf5-dev_1.10.4+repack-10_armhf.deb ...
Unpacking libhdf5-dev (1.10.4+repack-10) ...
Selecting previously unselected package libltdl7:armhf.
Preparing to unpack .../096-libltdl7_2.4.6-11_armhf.deb ...
Unpacking libltdl7:armhf (2.4.6-11) ...
Selecting previously unselected package libhwloc15:armhf.
Preparing to unpack .../097-libhwloc15_2.1.0+dfsg-3+rpi1_armhf.deb ...
Unpacking libhwloc15:armhf (2.1.0+dfsg-3+rpi1) ...
Selecting previously unselected package libltdl-dev:armhf.
Preparing to unpack .../098-libltdl-dev_2.4.6-11_armhf.deb ...
Unpacking libltdl-dev:armhf (2.4.6-11) ...
Selecting previously unselected package libhwloc-dev:armhf.
Preparing to unpack .../099-libhwloc-dev_2.1.0+dfsg-3+rpi1_armhf.deb ...
Unpacking libhwloc-dev:armhf (2.1.0+dfsg-3+rpi1) ...
Selecting previously unselected package libpciaccess0:armhf.
Preparing to unpack .../100-libpciaccess0_0.14-1_armhf.deb ...
Unpacking libpciaccess0:armhf (0.14-1) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../101-libxau6_1%3a1.0.8-1+b2_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.8-1+b2) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../102-libxdmcp6_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../103-libxcb1_1.13.1-2_armhf.deb ...
Unpacking libxcb1:armhf (1.13.1-2) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../104-libx11-data_2%3a1.6.8-1_all.deb ...
Unpacking libx11-data (2:1.6.8-1) ...
Selecting previously unselected package libx11-6:armhf.
Preparing to unpack .../105-libx11-6_2%3a1.6.8-1_armhf.deb ...
Unpacking libx11-6:armhf (2:1.6.8-1) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../106-libxext6_2%3a1.3.3-1+b2_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.3-1+b2) ...
Selecting previously unselected package libxnvctrl0:armhf.
Preparing to unpack .../107-libxnvctrl0_440.59-1_armhf.deb ...
Unpacking libxnvctrl0:armhf (440.59-1) ...
Selecting previously unselected package ocl-icd-libopencl1:armhf.
Preparing to unpack .../108-ocl-icd-libopencl1_2.2.12-3_armhf.deb ...
Unpacking ocl-icd-libopencl1:armhf (2.2.12-3) ...
Selecting previously unselected package libhwloc-plugins:armhf.
Preparing to unpack .../109-libhwloc-plugins_2.1.0+dfsg-3+rpi1_armhf.deb ...
Unpacking libhwloc-plugins:armhf (2.1.0+dfsg-3+rpi1) ...
Selecting previously unselected package libnl-3-dev:armhf.
Preparing to unpack .../110-libnl-3-dev_3.4.0-1_armhf.deb ...
Unpacking libnl-3-dev:armhf (3.4.0-1) ...
Selecting previously unselected package libnl-route-3-dev:armhf.
Preparing to unpack .../111-libnl-route-3-dev_3.4.0-1_armhf.deb ...
Unpacking libnl-route-3-dev:armhf (3.4.0-1) ...
Selecting previously unselected package libibverbs-dev:armhf.
Preparing to unpack .../112-libibverbs-dev_27.0-2_armhf.deb ...
Unpacking libibverbs-dev:armhf (27.0-2) ...
Selecting previously unselected package libnetcdf15:armhf.
Preparing to unpack .../113-libnetcdf15_1%3a4.7.3-1_armhf.deb ...
Unpacking libnetcdf15:armhf (1:4.7.3-1) ...
Selecting previously unselected package libnetcdf-dev.
Preparing to unpack .../114-libnetcdf-dev_1%3a4.7.3-1_armhf.deb ...
Unpacking libnetcdf-dev (1:4.7.3-1) ...
Selecting previously unselected package libpmix2:armhf.
Preparing to unpack .../115-libpmix2_3.1.4-1+b1_armhf.deb ...
Unpacking libpmix2:armhf (3.1.4-1+b1) ...
Selecting previously unselected package libopenmpi3:armhf.
Preparing to unpack .../116-libopenmpi3_4.0.2-5+rpi1_armhf.deb ...
Unpacking libopenmpi3:armhf (4.0.2-5+rpi1) ...
Selecting previously unselected package openmpi-common.
Preparing to unpack .../117-openmpi-common_4.0.2-5+rpi1_all.deb ...
Unpacking openmpi-common (4.0.2-5+rpi1) ...
Selecting previously unselected package openmpi-bin.
Preparing to unpack .../118-openmpi-bin_4.0.2-5+rpi1_armhf.deb ...
Unpacking openmpi-bin (4.0.2-5+rpi1) ...
Selecting previously unselected package libopenmpi-dev:armhf.
Preparing to unpack .../119-libopenmpi-dev_4.0.2-5+rpi1_armhf.deb ...
Unpacking libopenmpi-dev:armhf (4.0.2-5+rpi1) ...
Selecting previously unselected package mpi-default-dev.
Preparing to unpack .../120-mpi-default-dev_1.13_armhf.deb ...
Unpacking mpi-default-dev (1.13) ...
Selecting previously unselected package sbuild-build-depends-gerris-dummy.
Preparing to unpack .../121-sbuild-build-depends-gerris-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-gerris-dummy (0.invalid.0) ...
Setting up libpcrecpp0v5:armhf (2:8.39-12) ...
Setting up libpipeline1:armhf (1.5.2-2) ...
Setting up libpciaccess0:armhf (0.14-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up libkeyutils1:armhf (1.6.1-2) ...
Setting up libpsl5:armhf (0.20.2-2) ...
Setting up mime-support (3.64) ...
Setting up libpcre16-3:armhf (2:8.39-12) ...
Setting up hdf5-helpers (1.10.4+repack-10) ...
Setting up libgslcblas0:armhf (2.5+dfsg-6) ...
Setting up libmagic-mgc (1:5.38-4) ...
Setting up libarchive-zip-perl (1.67-1) ...
Setting up libglib2.0-0:armhf (2.62.4-1+rpi1) ...
No schema files found: doing nothing.
Setting up libdebhelper-perl (12.9) ...
Setting up libbrotli1:armhf (1.0.7-6) ...
Setting up libnghttp2-14:armhf (1.40.0-1+b2) ...
Setting up libmagic1:armhf (1:5.38-4) ...
Setting up libsepol1-dev:armhf (3.0-1) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up file (1:5.38-4) ...
Setting up libffi-dev:armhf (3.3-3) ...
Setting up libpcre2-16-0:armhf (10.34-7) ...
Setting up libaec0:armhf (1.0.4-1) ...
Setting up libicu63:armhf (63.2-2) ...
Setting up libkrb5support0:armhf (1.17-6+b1) ...
Setting up libgts-0.7-5:armhf (0.7.6+darcs121130-4) ...
Setting up autotools-dev (20180224.1) ...
Setting up libpcre2-32-0:armhf (10.34-7) ...
Setting up libglib2.0-data (2.62.4-2) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libx11-data (2:1.6.8-1) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Setting up libgsl23:armhf (2.5+dfsg-6) ...
Setting up uuid-dev:armhf (2.34-0.1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libpcre32-3:armhf (2:8.39-12) ...
Setting up libevent-core-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libevent-2.1-7:armhf (2.1.11-stable-1) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up pkg-config (0.29-6) ...
Setting up libpcre2-posix2:armhf (10.34-7) ...
Setting up libk5crypto3:armhf (1.17-6+b1) ...
Setting up libltdl7:armhf (2.4.6-11) ...
Setting up libgfortran5:armhf (9.2.1-25+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1.2) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up ocl-icd-libopencl1:armhf (2.2.12-3) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libnl-3-200:armhf (3.4.0-1) ...
Setting up openmpi-common (4.0.2-5+rpi1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up libkrb5-3:armhf (1.17-6+b1) ...
Setting up libmpdec2:armhf (2.4.2-2) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.1+20191019-1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-8) ...
Setting up libsz2:armhf (1.0.4-1) ...
Setting up libevent-pthreads-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libfile-stripnondeterminism-perl (1.6.3-2) ...
Setting up libblkid-dev:armhf (2.34-0.1) ...
Setting up libgts-bin (0.7.6+darcs121130-4) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libpython3.7-stdlib:armhf (3.7.6-1+b1) ...
Setting up libevent-extra-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libxcb1:armhf (1.13.1-2) ...
Setting up libgsl-dev (2.5+dfsg-6) ...
Setting up libpcre2-dev:armhf (10.34-7) ...
Setting up libtool (2.4.6-11) ...
Setting up libselinux1-dev:armhf (3.0-1) ...
Setting up libpcre3-dev:armhf (2:8.39-12) ...
Setting up libedit2:armhf (3.1-20191231-1) ...
Setting up libaec-dev:armhf (1.0.4-1) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up libgfortran-9-dev:armhf (9.2.1-25+rpi1) ...
Setting up libevent-openssl-2.1-7:armhf (2.1.11-stable-1) ...
Setting up libglib2.0-bin (2.62.4-1+rpi1) ...
Setting up m4 (1.4.18-4) ...
Setting up libnl-route-3-200:armhf (3.4.0-1) ...
Setting up libhdf5-103:armhf (1.10.4+repack-10) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libevent-dev (2.1.11-stable-1) ...
Setting up libhwloc15:armhf (2.1.0+dfsg-3+rpi1) ...
Setting up libgssapi-krb5-2:armhf (1.17-6+b1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.6.3-2) ...
Setting up dwz (0.13-5) ...
Setting up libnl-3-dev:armhf (3.4.0-1) ...
Setting up groff-base (1.22.4-4) ...
Setting up libx11-6:armhf (2:1.6.8-1) ...
Setting up libmount-dev:armhf (2.34-0.1) ...
Setting up libpython3-stdlib:armhf (3.7.5-3) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up python3.7 (3.7.6-1+b1) ...
Setting up libibverbs1:armhf (27.0-2) ...
Setting up gettext (0.19.8.1-10) ...
Setting up gfortran-9 (9.2.1-25+rpi1) ...
Setting up ibverbs-providers:armhf (27.0-2) ...
Setting up openssh-client (1:8.1p1-5) ...
Setting up libhdf5-cpp-103:armhf (1.10.4+repack-10) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libcurl3-gnutls:armhf (7.67.0-2) ...
Setting up python3 (3.7.5-3) ...
Setting up libcurl4-gnutls-dev:armhf (7.67.0-2) ...
Setting up man-db (2.9.0-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up gfortran (4:9.2.1-3.1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libxnvctrl0:armhf (440.59-1) ...
Setting up libnetcdf15:armhf (1:4.7.3-1) ...
Setting up libnl-route-3-dev:armhf (3.4.0-1) ...
Setting up libltdl-dev:armhf (2.4.6-11) ...
Setting up libhdf5-dev (1.10.4+repack-10) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up libnetcdf-dev (1:4.7.3-1) ...
Setting up libhwloc-dev:armhf (2.1.0+dfsg-3+rpi1) ...
Setting up python3-lib2to3 (3.8.0-1) ...
Setting up python3-distutils (3.8.0-1) ...
Setting up libglib2.0-dev-bin (2.62.4-1+rpi1) ...
Setting up po-debconf (1.0.21) ...
Setting up libibverbs-dev:armhf (27.0-2) ...
Setting up libhwloc-plugins:armhf (2.1.0+dfsg-3+rpi1) ...
Setting up libglib2.0-dev:armhf (2.62.4-1+rpi1) ...
Setting up libgts-dev:armhf (0.7.6+darcs121130-4) ...
Setting up libpmix2:armhf (3.1.4-1+b1) ...
Setting up libopenmpi3:armhf (4.0.2-5+rpi1) ...
Setting up openmpi-bin (4.0.2-5+rpi1) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up libopenmpi-dev:armhf (4.0.2-5+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode
Setting up mpi-default-dev (1.13) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (12.9) ...
Setting up dh-exec (0.23.2+b2) ...
Setting up sbuild-build-depends-gerris-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.29-9+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.4-armmp armhf (armv7l)
Toolchain package versions: binutils_2.33.90.20200122-2+rpi1 dpkg-dev_1.19.7 g++-9_9.2.1-25+rpi1 gcc-9_9.2.1-25+rpi1 libc6-dev_2.29-9+rpi1 libstdc++-9-dev_9.2.1-25+rpi1 libstdc++6_9.2.1-25+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-5 binutils_2.33.90.20200122-2+rpi1 binutils-arm-linux-gnueabihf_2.33.90.20200122-2+rpi1 binutils-common_2.33.90.20200122-2+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.2.1-25+rpi1 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.9 debianutils_4.9.1 dh-autoreconf_19 dh-exec_0.23.2+b2 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dirmngr_2.2.19-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.5-2 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.2.1-25+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-9_9.2.1-25+rpi1 gcc-9-base_9.2.1-25+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:9.2.1-3.1+rpi1 gfortran-9_9.2.1-25+rpi1 gnupg_2.2.19-1 gnupg-l10n_2.2.19-1 gnupg-utils_2.2.19-1 gpg_2.2.19-1 gpg-agent_2.2.19-1 gpg-wks-client_2.2.19-1 gpg-wks-server_2.2.19-1 gpgconf_2.2.19-1 gpgsm_2.2.19-1 gpgv_2.2.19-1 grep_3.4-1 groff-base_1.22.4-4 gzip_1.9-3 hdf5-helpers_1.10.4+repack-10 hostname_3.23 ibverbs-providers_27.0-2 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 libacl1_2.2.53-5 libaec-dev_1.0.4-1 libaec0_1.0.4-1 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-1 libasan5_9.2.1-25+rpi1 libassuan0_2.5.3-7 libatomic1_9.2.1-25+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libbinutils_2.33.90.20200122-2+rpi1 libblkid-dev_2.34-0.1 libblkid1_2.34-0.1 libbrotli1_1.0.7-6 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-9+rpi1 libc-dev-bin_2.29-9+rpi1 libc6_2.29-9+rpi1 libc6-dev_2.29-9+rpi1 libcap-ng0_0.7.9-2.1 libcap2_1:2.27-1 libcap2-bin_1:2.27-1 libcc1-0_9.2.1-25+rpi1 libcom-err2_1.45.5-2 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.10-10+b5 libcrypt1_1:4.4.10-10+b5 libctf-nobfd0_2.33.90.20200122-2+rpi1 libctf0_2.33.90.20200122-2+rpi1 libcurl3-gnutls_7.67.0-2 libcurl4-gnutls-dev_7.67.0-2 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.250 libdebhelper-perl_12.9 libdpkg-perl_1.19.7 libedit2_3.1-20191231-1 libelf1_0.176-1.1 libevent-2.1-7_2.1.11-stable-1 libevent-core-2.1-7_2.1.11-stable-1 libevent-dev_2.1.11-stable-1 libevent-extra-2.1-7_2.1.11-stable-1 libevent-openssl-2.1-7_2.1.11-stable-1 libevent-pthreads-2.1-7_2.1.11-stable-1 libexpat1_2.2.9-1 libext2fs2_1.45.5-2 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi-dev_3.3-3 libffi7_3.3-3 libfile-stripnondeterminism-perl_1.6.3-2 libgcc-9-dev_9.2.1-25+rpi1 libgcc1_1:9.2.1-25+rpi1 libgcrypt20_1.8.5-3 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-9-dev_9.2.1-25+rpi1 libgfortran5_9.2.1-25+rpi1 libglib2.0-0_2.62.4-1+rpi1 libglib2.0-bin_2.62.4-1+rpi1 libglib2.0-data_2.62.4-2 libglib2.0-dev_2.62.4-1+rpi1 libglib2.0-dev-bin_2.62.4-1+rpi1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.11.1-2 libgomp1_9.2.1-25+rpi1 libgpg-error0_1.36-7 libgsl-dev_2.5+dfsg-6 libgsl23_2.5+dfsg-6 libgslcblas0_2.5+dfsg-6 libgssapi-krb5-2_1.17-6+b1 libgts-0.7-5_0.7.6+darcs121130-4 libgts-bin_0.7.6+darcs121130-4 libgts-dev_0.7.6+darcs121130-4 libhdf5-103_1.10.4+repack-10 libhdf5-cpp-103_1.10.4+repack-10 libhdf5-dev_1.10.4+repack-10 libhogweed5_3.5.1+really3.5.1-2 libhwloc-dev_2.1.0+dfsg-3+rpi1 libhwloc-plugins_2.1.0+dfsg-3+rpi1 libhwloc15_2.1.0+dfsg-3+rpi1 libibverbs-dev_27.0-2 libibverbs1_27.0-2 libicu63_63.2-2 libidn2-0_2.2.0-2 libisl22_0.22-2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libk5crypto3_1.17-6+b1 libkeyutils1_1.6.1-2 libkrb5-3_1.17-6+b1 libkrb5support0_1.17-6+b1 libksba8_1.3.5-2 libldap-2.4-2_2.4.48+dfsg-1+b2 libldap-common_2.4.48+dfsg-1 libltdl-dev_2.4.6-11 libltdl7_2.4.6-11 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount-dev_2.34-0.1 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.2-1 libncursesw6_6.1+20191019-1 libnetcdf-dev_1:4.7.3-1 libnetcdf15_1:4.7.3-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1+b2 libnl-3-200_3.4.0-1 libnl-3-dev_3.4.0-1 libnl-route-3-200_3.4.0-1 libnl-route-3-dev_3.4.0-1 libnpth0_1.6-1 libopenmpi-dev_4.0.2-5+rpi1 libopenmpi3_4.0.2-5+rpi1 libp11-kit0_0.23.18.1-2+b1 libpam-cap_1:2.27-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpciaccess0_0.14-1 libpcre16-3_2:8.39-12 libpcre2-16-0_10.34-7 libpcre2-32-0_10.34-7 libpcre2-8-0_10.34-7 libpcre2-dev_10.34-7 libpcre2-posix2_10.34-7 libpcre3_2:8.39-12 libpcre3-dev_2:8.39-12 libpcre32-3_2:8.39-12 libpcrecpp0v5_2:8.39-12 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libpmix2_3.1.4-1+b1 libpsl5_0.20.2-2 libpython3-stdlib_3.7.5-3 libpython3.7-minimal_3.7.6-1+b1 libpython3.7-stdlib_3.7.6-1+b1 libreadline7_7.0-5 libreadline8_8.0-3 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.2-2+rpi1 libselinux1_3.0-1 libselinux1-dev_3.0-1 libsemanage-common_3.0-1 libsemanage1_3.0-1 libsepol1_3.0-1 libsepol1-dev_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libsqlite3-0_3.31.0+really3.30.1+fossil191229-1 libss2_1.45.5-2 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1d-2 libstdc++-9-dev_9.2.1-25+rpi1 libstdc++6_9.2.1-25+rpi1 libsub-override-perl_0.09-2 libsystemd0_244.1-1+rpi1 libsz2_1.0.4-1 libtasn1-6_4.15.0-2 libtinfo5_6.1+20191019-1 libtinfo6_6.1+20191019-1 libtool_2.4.6-11 libubsan1_9.2.1-25+rpi1 libuchardet0_0.0.6-3 libudev1_244.1-1+rpi1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libx11-6_2:1.6.8-1 libx11-data_2:1.6.8-1 libxau6_1:1.0.8-1+b2 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxml2_2.9.4+dfsg1-8 libxnvctrl0_440.59-1 libzstd1_1.4.4+dfsg-1+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8-1 logsave_1.45.5-2 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.0-2 mawk_1.3.4.20200120-1 mime-support_3.64 mount_2.34-0.1 mpi-default-dev_1.13 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 netbase_6.0 ocl-icd-libopencl1_2.2.12-3 openmpi-bin_4.0.2-5+rpi1 openmpi-common_4.0.2-5+rpi1 openssh-client_1:8.1p1-5 passwd_1:4.8-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 pkg-config_0.29-6 po-debconf_1.0.21 python3_3.7.5-3 python3-distutils_3.8.0-1 python3-lib2to3_3.8.0-1 python3-minimal_3.7.5-3 python3.7_3.7.6-1+b1 python3.7-minimal_3.7.6-1+b1 raspbian-archive-keyring_20120528.2 readline-common_8.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-gerris-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-2.1 tar_1.30+dfsg-6 tzdata_2019c-3 util-linux_2.34-0.1 uuid-dev_2.34-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1.2 zlib1g-dev_1:1.2.11.dfsg-1.2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Mon Feb 10 09:42:31 2020 UTC
gpgv:                using RSA key 90E2D2C1AD146A1B7EBB891DBBC17EBB1396F2F7
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./gerris_20131206+dfsg-19.dsc
dpkg-source: info: extracting gerris in /<<BUILDDIR>>/gerris-20131206+dfsg
dpkg-source: info: unpacking gerris_20131206+dfsg.orig.tar.gz
dpkg-source: info: unpacking gerris_20131206+dfsg-19.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 01_automake_doc_examples
dpkg-source: info: applying 02_fix_makefiles.patch
dpkg-source: info: applying 03_build_funct.patch
dpkg-source: info: applying 05_reproducible_build.patch
dpkg-source: info: applying 05_Port-to-Python-3.patch
dpkg-source: info: applying 06_Port-to-MPI-3.0.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-d6944535-bf4c-488b-8b43-da596edd2f09
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package gerris
dpkg-buildpackage: info: source version 20131206+dfsg-19
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean
   dh_clean
 debian/rules binary-arch
dh binary-arch
   dh_update_autotools_config -a
   dh_autoreconf -a
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:50: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated.  For more info, see:
configure.ac:50: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation
configure.ac:108: installing './compile'
configure.ac:50: installing './missing'
doc/Makefile.am:9: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
doc/Makefile.am:12: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory,
doc/Makefile.am:12: but option 'subdir-objects' is disabled
automake: warning: possible forward-incompatibility.
automake: At least a source file is in a subdirectory, but the 'subdir-objects'
automake: automake option hasn't been enabled.  For now, the corresponding output
automake: object file(s) will be placed in the top-level directory.  However,
automake: this behaviour will change in future Automake versions: they will
automake: unconditionally cause object files to be placed in the same subdirectory
automake: of the corresponding sources.
automake: You are advised to start using 'subdir-objects' option throughout your
automake: project, to avoid future incompatibilities.
doc/Makefile.am: installing './depcomp'
doc/examples/Makefile.am:118: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
doc/examples/Makefile.am:123: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory,
doc/examples/Makefile.am:123: but option 'subdir-objects' is disabled
parallel-tests: installing './test-driver'
modules/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
src/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
tools/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_configure -- --enable-mpi
	./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-mpi
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for mpicc... yes
checking for gcc... mpicc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether mpicc accepts -g... yes
checking for mpicc option to accept ISO C89... none needed
checking whether mpicc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of mpicc... none
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... dlltool
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from mpicc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... mpicc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if mpicc supports -fno-rtti -fno-exceptions... no
checking for mpicc option to produce PIC... -fPIC -DPIC
checking if mpicc PIC flag -fPIC -DPIC works... yes
checking if mpicc static flag -static works... no
checking if mpicc supports -c -o file.o... yes
checking if mpicc supports -c -o file.o... (cached) yes
checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gawk... (cached) mawk
checking for library containing strerror... none required
checking for ANSI C header files... (cached) yes
checking whether pointers can be stored in doubles... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for GTS... yes
checking whether modules are supported... yes
checking for pkg-config... yes
checking for m4... yes
checking check whether m4 accepts the -P option... yes
checking for pj_fwd in -lproj... no
configure: WARNING: libproj not found. Map module will not be available.
checking proj_api.h usability... no
checking proj_api.h presence... no
checking for proj_api.h... no
checking for gsl-config... /usr/bin/gsl-config
checking for GSL - version >= 0.2.5... yes
checking for nc_open in -lnetcdf... yes
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for g77... no
checking for xlf... no
checking for f77... f77
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether f77 accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for f77 option to produce PIC... -fPIC
checking if f77 PIC flag -fPIC works... yes
checking if f77 static flag -static works... yes
checking if f77 supports -c -o file.o... yes
checking if f77 supports -c -o file.o... (cached) yes
checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking how to get verbose linking output from f77... -v
checking for Fortran 77 libraries of f77...  -L/usr/lib/gcc/arm-linux-gnueabihf/9 -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/9/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking for ode-config... no
configure: WARNING: ODE not found. ode module will not be available.
checking for HYPRE_IJMatrixCreate in -lHYPRE... no
configure: WARNING: HYPRE not found. hypre Module won't be available.
checking for lis_initialize in -llis... no
configure: WARNING: lis not found. lis Module won't be available.
checking for FFTW3... no
checking fenv.h usability... yes
checking fenv.h presence... yes
checking for fenv.h... yes
checking for unistd.h... (cached) yes
checking getopt.h usability... yes
checking getopt.h presence... yes
checking for getopt.h... yes
checking for getopt_long... yes
checking for g_mkdtemp... yes
checking for open_memstream... yes
checking for funopen... no
checking for open_memstream... (cached) yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/gerris2D.pc
config.status: creating src/gerris3D.pc
config.status: creating tools/Makefile
config.status: creating modules/Makefile
config.status: creating modules/RStarTree/Makefile
config.status: creating modules/kdt/Makefile
config.status: creating modules/fes2004/Makefile
config.status: creating modules/wavewatch/Makefile
config.status: creating modules/culvert/Makefile
config.status: creating test/Makefile
config.status: creating doc/Makefile
config.status: creating doc/tutorial/Makefile
config.status: creating doc/examples/Makefile
config.status: creating doc/manpages/Makefile
config.status: creating doc/examples/gfs2doc
config.status: creating doc/examples/gfs-highlight
config.status: creating doc/examples/crossref.sh
config.status: creating desktop/Makefile
config.status: creating debian/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands

Configuration summary

  System            = arm-unknown-linux-gnueabihf
  C   Compiler      = mpicc
  C   Flags         = -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99
  MPI enabled       = yes
  GModule support   = yes
  pkg-config        = yes
  m4                = yes
  m4 options        = -P
  open_memstream    = yes

Modules

  map               = no
  tide              = yes
  stokes            = yes
  wavewatch         = no
  hypre             = no
  lis               = no
  agmg              = no
  ode               = no
  bubbles           = yes
  fft               = no

make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
   dh_auto_build -a
	make -j1
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make  all-recursive
make[2]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
Making all in src
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make  all-am
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris2D-gerris.o `test -f 'gerris.c' || echo './'`gerris.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from gerris.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ftt.lo `test -f 'ftt.c' || echo './'`ftt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from ftt.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-fluid.lo `test -f 'fluid.c' || echo './'`fluid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from fluid.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
fluid.c:126:20: warning: 'interpolate_1D2' defined but not used [-Wunused-function]
  126 | static GfsGradient interpolate_1D2 (FttCell * cell,
      |                    ^~~~~~~~~~~~~~~
fluid.c: In function 'face_bilinear':
fluid.c:1151:37: warning: 'd[2]' is used uninitialized in this function [-Wuninitialized]
 1151 |   d1[0] = d[1]; d1[1] = d[0]; d1[2] = d[2];
      |                               ~~~~~~^~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-variable.lo `test -f 'variable.c' || echo './'`variable.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from variable.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-output.lo `test -f 'output.c' || echo './'`output.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from output.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-solid.lo `test -f 'solid.c' || echo './'`solid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from solid.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
solid.c: In function 'paint_mixed_leaf':
solid.c:794:13: warning: ((const char*) (__func__))
  794 |          w/k, i, solid->s[i]);
      |             ^~~~~~~~~~~~~~~~~~          
solid.c: In function 'check_area_fractions':
solid.c:1010:13: warning: ((const char*) (__func__))
 1010 |    bb.x2, bb.y2, bb.z2);
      |             ^~~~~~~~~~~~                
solid.c:1019:13: warning: ((const char*) (__func__))
 1019 |    bb.x2, bb.y2, bb.z2);
      |             ^~~~~~~~~~~~                
solid.c:1039:13: warning: ((const char*) (__func__))
 1039 |     oi, nsolid->s[oi]);
      |             ^~~~~~~~~~~                 
solid.c:1053:13: warning: ((const char*) (__func__))
 1053 |          oi, nsolid->s[oi]);
      |             ^~~~~~~~~~~~~~~~            
solid.c:1065:13: warning: ((const char*) (__func__))
 1065 |          i, solid->s[i]);
      |             ^~~~~~~~~~~~~               
solid.c:1081:13: warning: ((const char*) (__func__))
 1081 |     i, solid->s[i]);
      |             ^~~~~~~~                    
solid.c:1095:13: warning: ((const char*) (__func__))
 1095 |          i, solid->s[i]);
      |             ^~~~~~~~~~~~~               
solid.c: In function 'check_solid_fractions':
solid.c:1127:13: warning: ((const char*) (__func__))
 1127 |      n, GFS_STATE (children.c[n])->solid->a);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
solid.c:1145:13: warning: ((const char*) (__func__))
 1145 |    a, GFS_STATE (cell)->solid->a);
      |             ^~~~~~~~~~~~~~~~~~~~~~      
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-poisson.lo `test -f 'poisson.c' || echo './'`poisson.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from poisson.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-advection.lo `test -f 'advection.c' || echo './'`advection.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from advection.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
advection.c: In function 'set_merged':
advection.c:663:13: warning: ((const char*) (__func__))
  663 |    solid->a);
      |             ^                           
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-boundary.lo `test -f 'boundary.c' || echo './'`boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from boundary.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-mpi_boundary.lo `test -f 'mpi_boundary.c' || echo './'`mpi_boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from mpi_boundary.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
mpi_boundary.c: In function 'gfs_boundary_mpi_init':
mpi_boundary.c:280:5: warning: 'MPI_Attr_get' is deprecated: MPI_Attr_get was deprecated in MPI-2.0; use MPI_Comm_get_attr instead [-Wdeprecated-declarations]
  280 |     MPI_Attr_get (MPI_COMM_WORLD, MPI_TAG_UB, &tagub, &flag);
      |     ^~~~~~~~~~~~
In file included from utils.h:34,
                 from boundary.h:24,
                 from domain.h:23,
                 from mpi_boundary.c:24:
/usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2701:20: note: declared here
 2701 | OMPI_DECLSPEC  int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag)
      |                    ^~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-timestep.lo `test -f 'timestep.c' || echo './'`timestep.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from timestep.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-domain.lo `test -f 'domain.c' || echo './'`domain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from domain.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-init.lo `test -f 'init.c' || echo './'`init.c
init.c:33: warning: "_GNU_SOURCE" redefined
   33 | # define _GNU_SOURCE
      | 
<command-line>: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/fenv.h:26,
                 from init.c:34:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-refine.lo `test -f 'refine.c' || echo './'`refine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from refine.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-event.lo `test -f 'event.c' || echo './'`event.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from event.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-simulation.lo `test -f 'simulation.c' || echo './'`simulation.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from simulation.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
simulation.c: In function 'error_handler':
simulation.c:1780:39: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=]
 1780 |     snprintf (fname, 20, "error-%d.gfs", domain->pid);
      |                                       ^
In file included from /usr/include/stdio.h:867,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from simulation.h:27,
                 from simulation.c:27:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 12 and 21 bytes into a destination of size 20
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-graphic.lo `test -f 'graphic.c' || echo './'`graphic.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from graphic.c:30:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
graphic.c: In function 'grow_curve':
graphic.c:1986:17: warning: variable 'p1' set but not used [-Wunused-but-set-variable]
 1986 |       FttVector p1;
      |                 ^~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-adaptive.lo `test -f 'adaptive.c' || echo './'`adaptive.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from adaptive.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-source.lo `test -f 'source.c' || echo './'`source.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from source.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-tension.lo `test -f 'tension.c' || echo './'`tension.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from tension.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-vof.lo `test -f 'vof.c' || echo './'`vof.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from vof.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
vof.c: In function 'gfs_height_curvature':
vof.c:2619:11: warning: unused variable 'area' [-Wunused-variable]
 2619 |   gdouble area = gfs_vof_center (cell, t, &fc);
      |           ^~~~
vof.c: In function 'gfs_height_curvature_new':
vof.c:2871:11: warning: unused variable 'area' [-Wunused-variable]
 2871 |   gdouble area = gfs_vof_center (cell, GFS_VARIABLE_TRACER_VOF (t), &fc);
      |           ^~~~
At top level:
vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function]
 1771 | static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v)
      |                ^~~~~~~~~~
vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function]
  850 | static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n)
      |             ^~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-utils.lo `test -f 'utils.c' || echo './'`utils.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from utils.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
utils.c: In function 'get_tmp_file':
utils.c:57:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations]
   57 |   GTimeVal tv;
      |   ^~~~~~~~
In file included from /usr/include/glib-2.0/glib/galloca.h:32,
                 from /usr/include/glib-2.0/glib.h:30,
                 from /usr/include/gts.h:24,
                 from solid.h:23,
                 from utils.c:36:
/usr/include/glib-2.0/glib/gtypes.h:551:8: note: declared here
  551 | struct _GTimeVal
      |        ^~~~~~~~~
utils.c:72:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations]
   72 |   g_get_current_time (&tv);
      |   ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/glib-2.0/glib/giochannel.h:33,
                 from /usr/include/glib-2.0/glib.h:54,
                 from /usr/include/gts.h:24,
                 from solid.h:23,
                 from utils.c:36:
/usr/include/glib-2.0/glib/gmain.h:575:8: note: declared here
  575 | void   g_get_current_time                 (GTimeVal       *result);
      |        ^~~~~~~~~~~~~~~~~~
utils.c: In function 'current_time':
utils.c:653:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations]
  653 |   GTimeVal r;
      |   ^~~~~~~~
In file included from /usr/include/glib-2.0/glib/galloca.h:32,
                 from /usr/include/glib-2.0/glib.h:30,
                 from /usr/include/gts.h:24,
                 from solid.h:23,
                 from utils.c:36:
/usr/include/glib-2.0/glib/gtypes.h:551:8: note: declared here
  551 | struct _GTimeVal
      |        ^~~~~~~~~
utils.c:654:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations]
  654 |   g_get_current_time (&r);
      |   ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/glib-2.0/glib/giochannel.h:33,
                 from /usr/include/glib-2.0/glib.h:54,
                 from /usr/include/gts.h:24,
                 from solid.h:23,
                 from utils.c:36:
/usr/include/glib-2.0/glib/gmain.h:575:8: note: declared here
  575 | void   g_get_current_time                 (GTimeVal       *result);
      |        ^~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ocean.lo `test -f 'ocean.c' || echo './'`ocean.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from ocean.c:24:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
ocean.c: In function 'correct_normal_velocity':
ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable]
   45 |   FttFaceType type;
      |               ^~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-wave.lo `test -f 'wave.c' || echo './'`wave.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from wave.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-levelset.lo `test -f 'levelset.c' || echo './'`levelset.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from levelset.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-cartesian.lo `test -f 'cartesian.c' || echo './'`cartesian.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from cartesian.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-surface.lo `test -f 'surface.c' || echo './'`surface.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from simulation.h:27,
                 from surface.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-unstructured.lo `test -f 'unstructured.c' || echo './'`unstructured.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from unstructured.h:24,
                 from unstructured.c:24:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-map.lo `test -f 'map.c' || echo './'`map.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from advection.h:27,
                 from timestep.h:27,
                 from variable.h:29,
                 from map.h:27,
                 from map.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
map.c: In function 'gfs_map_read':
map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable]
   34 |   gboolean class_changed = FALSE;
      |            ^~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-river.lo `test -f 'river.c' || echo './'`river.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from river.c:55:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-moving.lo `test -f 'moving.c' || echo './'`moving.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from moving.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
In file included from moving.c:49:
moving2.c: In function 'second_order_face_fractions':
moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable]
  257 |   gdouble dt1, dt2, dto1, dto2, s1, s2;
      |                                 ^~
moving2.c: In function 'old_solid_fractions_from_children':
moving2.c:731:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
  731 |     for (i = 0; i < FTT_CELLS; i++)
      |     ^~~
moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
  735 |       gfs_cell_init_solid_fractions_from_children (cell);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-balance.lo `test -f 'balance.c' || echo './'`balance.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from event.h:27,
                 from balance.h:27,
                 from balance.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-metric.lo `test -f 'metric.c' || echo './'`metric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from metric.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable]
  241 | static double kpu_2d_l4[17][3] = {
      |               ^~~~~~~~~
metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable]
  221 | static double kpu_2d_l2[5][3] = {
      |               ^~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-particle.lo `test -f 'particle.c' || echo './'`particle.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from particle.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -Wl,-z,now -o libgfs2D.la -rpath /usr/lib/arm-linux-gnueabihf libgfs2D_la-ftt.lo libgfs2D_la-fluid.lo libgfs2D_la-variable.lo libgfs2D_la-output.lo libgfs2D_la-solid.lo libgfs2D_la-poisson.lo libgfs2D_la-advection.lo libgfs2D_la-boundary.lo libgfs2D_la-mpi_boundary.lo libgfs2D_la-timestep.lo libgfs2D_la-domain.lo libgfs2D_la-init.lo libgfs2D_la-refine.lo libgfs2D_la-event.lo libgfs2D_la-simulation.lo libgfs2D_la-graphic.lo libgfs2D_la-adaptive.lo libgfs2D_la-source.lo libgfs2D_la-tension.lo libgfs2D_la-vof.lo libgfs2D_la-utils.lo libgfs2D_la-ocean.lo libgfs2D_la-wave.lo libgfs2D_la-levelset.lo libgfs2D_la-cartesian.lo libgfs2D_la-surface.lo libgfs2D_la-unstructured.lo libgfs2D_la-map.lo libgfs2D_la-river.lo libgfs2D_la-moving.lo libgfs2D_la-balance.lo libgfs2D_la-metric.lo libgfs2D_la-particle.lo   -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gerris2D gerris2D-gerris.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris.o gerris.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from gerris.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ftt.lo ftt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from ftt.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o fluid.lo fluid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from fluid.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
fluid.c: In function 'gfs_cell_coarse_fine':
fluid.c:1918:42: warning: unused variable 'gz4' [-Wunused-variable]
 1918 |       double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa;
      |                                          ^~~
fluid.c:1918:14: warning: unused variable 'gz3' [-Wunused-variable]
 1918 |       double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa;
      |              ^~~
fluid.c:1916:42: warning: unused variable 'gy4' [-Wunused-variable]
 1916 |       double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa;
      |                                          ^~~
fluid.c:1916:14: warning: unused variable 'gy3' [-Wunused-variable]
 1916 |       double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa;
      |              ^~~
fluid.c:1914:42: warning: unused variable 'gx4' [-Wunused-variable]
 1914 |       double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa;
      |                                          ^~~
fluid.c:1914:14: warning: unused variable 'gx3' [-Wunused-variable]
 1914 |       double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa;
      |              ^~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o variable.lo variable.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from variable.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o output.lo output.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from output.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o solid.lo solid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from solid.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
solid.c: In function 'set_solid_fractions_from_surface':
solid.c:561:21: warning: comparison between 'FttComponent' {aka 'enum <anonymous>'} and 'enum <anonymous>' [-Wenum-compare]
  561 |       for (c = 1; c < FTT_NEIGHBORS; c++)
      |                     ^
solid.c: In function 'paint_mixed_leaf':
solid.c:794:13: warning: ((const char*) (__func__))
  794 |          w/k, i, solid->s[i]);
      |             ^~~~~~~~~~~~~~~~~~          
solid.c: In function 'check_area_fractions':
solid.c:1010:13: warning: ((const char*) (__func__))
 1010 |    bb.x2, bb.y2, bb.z2);
      |             ^~~~~~~~~~~~                
solid.c:1019:13: warning: ((const char*) (__func__))
 1019 |    bb.x2, bb.y2, bb.z2);
      |             ^~~~~~~~~~~~                
solid.c:1039:13: warning: ((const char*) (__func__))
 1039 |     oi, nsolid->s[oi]);
      |             ^~~~~~~~~~~                 
solid.c:1053:13: warning: ((const char*) (__func__))
 1053 |          oi, nsolid->s[oi]);
      |             ^~~~~~~~~~~~~~~~            
solid.c:1065:13: warning: ((const char*) (__func__))
 1065 |          i, solid->s[i]);
      |             ^~~~~~~~~~~~~               
solid.c:1081:13: warning: ((const char*) (__func__))
 1081 |     i, solid->s[i]);
      |             ^~~~~~~~                    
solid.c:1095:13: warning: ((const char*) (__func__))
 1095 |          i, solid->s[i]);
      |             ^~~~~~~~~~~~~               
solid.c: In function 'check_solid_fractions':
solid.c:1127:13: warning: ((const char*) (__func__))
 1127 |      n, GFS_STATE (children.c[n])->solid->a);
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
solid.c:1145:13: warning: ((const char*) (__func__))
 1145 |    a, GFS_STATE (cell)->solid->a);
      |             ^~~~~~~~~~~~~~~~~~~~~~      
In file included from solid.c:338:
At top level:
isocube.h:95:21: warning: 'corner' defined but not used [-Wunused-variable]
   95 | static FttDirection corner[8][3] = {
      |                     ^~~~~~
isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable]
   66 | static FttVector cvertex[8] = {
      |                  ^~~~~~~
isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable]
   52 | static guint connectv[12][2][4] = {
      |              ^~~~~~~~
isocube.h:47:18: warning: 'edge' defined but not used [-Wunused-variable]
   47 | static FttVector edge[12][2] = {
      |                  ^~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o poisson.lo poisson.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from poisson.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o advection.lo advection.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from advection.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
advection.c: In function 'set_merged':
advection.c:663:13: warning: ((const char*) (__func__))
  663 |    solid->a);
      |             ^                           
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o boundary.lo boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from boundary.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o mpi_boundary.lo mpi_boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from mpi_boundary.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
mpi_boundary.c: In function 'gfs_boundary_mpi_init':
mpi_boundary.c:280:5: warning: 'MPI_Attr_get' is deprecated: MPI_Attr_get was deprecated in MPI-2.0; use MPI_Comm_get_attr instead [-Wdeprecated-declarations]
  280 |     MPI_Attr_get (MPI_COMM_WORLD, MPI_TAG_UB, &tagub, &flag);
      |     ^~~~~~~~~~~~
In file included from utils.h:34,
                 from boundary.h:24,
                 from domain.h:23,
                 from mpi_boundary.c:24:
/usr/lib/arm-linux-gnueabihf/openmpi/include/mpi.h:2701:20: note: declared here
 2701 | OMPI_DECLSPEC  int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag)
      |                    ^~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o timestep.lo timestep.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from timestep.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o domain.lo domain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from domain.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o init.lo init.c
init.c:33: warning: "_GNU_SOURCE" redefined
   33 | # define _GNU_SOURCE
      | 
<command-line>: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/fenv.h:26,
                 from init.c:34:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o refine.lo refine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from refine.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o event.lo event.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from event.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o simulation.lo simulation.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from simulation.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
simulation.c: In function 'error_handler':
simulation.c:1780:39: warning: '__builtin___snprintf_chk' output may be truncated before the last format character [-Wformat-truncation=]
 1780 |     snprintf (fname, 20, "error-%d.gfs", domain->pid);
      |                                       ^
In file included from /usr/include/stdio.h:867,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from simulation.h:27,
                 from simulation.c:27:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:10: note: '__builtin___snprintf_chk' output between 12 and 21 bytes into a destination of size 20
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o graphic.lo graphic.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from graphic.c:30:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
In file included from graphic.c:42:
isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable]
   66 | static FttVector cvertex[8] = {
      |                  ^~~~~~~
isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable]
   52 | static guint connectv[12][2][4] = {
      |              ^~~~~~~~
isocube.h:39:14: warning: 'face_v' defined but not used [-Wunused-variable]
   39 | static guint face_v[6][4] = {
      |              ^~~~~~
isocube.h:31:14: warning: 'face' defined but not used [-Wunused-variable]
   31 | static guint face[6][4][2] = {
      |              ^~~~
isocube.h:27:18: warning: 'vertex' defined but not used [-Wunused-variable]
   27 | static FttVector vertex[8] = {
      |                  ^~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o adaptive.lo adaptive.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from adaptive.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o source.lo source.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from source.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o tension.lo tension.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from tension.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o vof.lo vof.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from vof.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
vof.c:2682:13: warning: 'curvature_from_h' defined but not used [-Wunused-function]
 2682 | static void curvature_from_h (FttCell * cell, GfsDomain * domain,
      |             ^~~~~~~~~~~~~~~~
vof.c:2646:16: warning: 'neighboring_column' defined but not used [-Wunused-function]
 2646 | static gdouble neighboring_column (FttCell * cell,
      |                ^~~~~~~~~~~~~~~~~~
vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function]
 1771 | static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v)
      |                ^~~~~~~~~~
vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function]
  850 | static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n)
      |             ^~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o utils.lo utils.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from utils.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
utils.c: In function 'get_tmp_file':
utils.c:57:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations]
   57 |   GTimeVal tv;
      |   ^~~~~~~~
In file included from /usr/include/glib-2.0/glib/galloca.h:32,
                 from /usr/include/glib-2.0/glib.h:30,
                 from /usr/include/gts.h:24,
                 from solid.h:23,
                 from utils.c:36:
/usr/include/glib-2.0/glib/gtypes.h:551:8: note: declared here
  551 | struct _GTimeVal
      |        ^~~~~~~~~
utils.c:72:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations]
   72 |   g_get_current_time (&tv);
      |   ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/glib-2.0/glib/giochannel.h:33,
                 from /usr/include/glib-2.0/glib.h:54,
                 from /usr/include/gts.h:24,
                 from solid.h:23,
                 from utils.c:36:
/usr/include/glib-2.0/glib/gmain.h:575:8: note: declared here
  575 | void   g_get_current_time                 (GTimeVal       *result);
      |        ^~~~~~~~~~~~~~~~~~
utils.c: In function 'current_time':
utils.c:653:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations]
  653 |   GTimeVal r;
      |   ^~~~~~~~
In file included from /usr/include/glib-2.0/glib/galloca.h:32,
                 from /usr/include/glib-2.0/glib.h:30,
                 from /usr/include/gts.h:24,
                 from solid.h:23,
                 from utils.c:36:
/usr/include/glib-2.0/glib/gtypes.h:551:8: note: declared here
  551 | struct _GTimeVal
      |        ^~~~~~~~~
utils.c:654:3: warning: 'g_get_current_time' is deprecated: Use 'g_get_real_time' instead [-Wdeprecated-declarations]
  654 |   g_get_current_time (&r);
      |   ^~~~~~~~~~~~~~~~~~
In file included from /usr/include/glib-2.0/glib/giochannel.h:33,
                 from /usr/include/glib-2.0/glib.h:54,
                 from /usr/include/gts.h:24,
                 from solid.h:23,
                 from utils.c:36:
/usr/include/glib-2.0/glib/gmain.h:575:8: note: declared here
  575 | void   g_get_current_time                 (GTimeVal       *result);
      |        ^~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ocean.lo ocean.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from ocean.c:24:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
ocean.c: In function 'correct_normal_velocity':
ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable]
   45 |   FttFaceType type;
      |               ^~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o wave.lo wave.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from wave.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o levelset.lo levelset.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from levelset.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o cartesian.lo cartesian.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from cartesian.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o surface.lo surface.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from simulation.h:27,
                 from surface.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o unstructured.lo unstructured.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from unstructured.h:24,
                 from unstructured.c:24:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o map.lo map.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from advection.h:27,
                 from timestep.h:27,
                 from variable.h:29,
                 from map.h:27,
                 from map.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
map.c: In function 'gfs_map_read':
map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable]
   34 |   gboolean class_changed = FALSE;
      |            ^~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o river.lo river.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from river.c:55:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o moving.lo moving.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from moving.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
In file included from moving.c:49:
moving2.c: In function 'second_order_face_fractions':
moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable]
  257 |   gdouble dt1, dt2, dto1, dto2, s1, s2;
      |                                 ^~
moving2.c: In function 'old_solid_fractions_from_children':
moving2.c:731:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
  731 |     for (i = 0; i < FTT_CELLS; i++)
      |     ^~~
moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
  735 |       gfs_cell_init_solid_fractions_from_children (cell);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o balance.lo balance.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from event.h:27,
                 from balance.h:27,
                 from balance.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o metric.lo metric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from metric.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable]
  241 | static double kpu_2d_l4[17][3] = {
      |               ^~~~~~~~~
metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable]
  221 | static double kpu_2d_l2[5][3] = {
      |               ^~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o particle.lo particle.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from particle.c:23:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -Wl,-z,now -o libgfs3D.la -rpath /usr/lib/arm-linux-gnueabihf ftt.lo fluid.lo variable.lo output.lo solid.lo poisson.lo advection.lo boundary.lo mpi_boundary.lo timestep.lo domain.lo init.lo refine.lo event.lo simulation.lo graphic.lo adaptive.lo source.lo tension.lo vof.lo utils.lo ocean.lo wave.lo levelset.lo cartesian.lo surface.lo unstructured.lo map.lo river.lo moving.lo balance.lo metric.lo particle.lo   -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gerris3D gerris.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
Making all in modules
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making all in RStarTree
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RStarTree.lo `test -f 'RStarTree.c' || echo './'`RStarTree.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from RStarTree.c:3:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
RStarTree.c: In function 'BasicCheck':
RStarTree.c:824:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
  824 |     fprintf(stderr,"%s %ld\n","sizeof(byte):",sizeof(byte));
      |                        ~~^                    ~~~~~~~~~~~~
      |                          |                    |
      |                          long int             unsigned int
      |                        %d
RStarTree.c:831:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
  831 |     fprintf(stderr,"%s %ld\n","sizeof(int):",sizeof(int));
      |                        ~~^                   ~~~~~~~~~~~
      |                          |                   |
      |                          long int            unsigned int
      |                        %d
RStarTree.c:838:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
  838 |     fprintf(stderr,"%s %ld\n","sizeof(typinfo):",sizeof(typinfo));
      |                        ~~^                       ~~~~~~~~~~~~~~~
      |                          |                       |
      |                          long int                unsigned int
      |                        %d
RStarTree.c:839:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
  839 |     fprintf(stderr,"%s %ld\n","    sizeof(int):",sizeof(int));
      |                        ~~^                       ~~~~~~~~~~~
      |                          |                       |
      |                          long int                unsigned int
      |                        %d
RStarTree.c:846:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
  846 |     fprintf(stderr,"%s %ld\n"," sizeof(typpagedir):",sizeof(typpagedir));
      |                        ~~^                           ~~~~~~~~~~~~~~~~~~
      |                          |                           |
      |                          long int                    unsigned int
      |                        %d
RStarTree.c:847:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
  847 |     fprintf(stderr,"%s %ld\n","sizeof(typfixblock):",sizeof(typfixblock));
      |                        ~~^                           ~~~~~~~~~~~~~~~~~~~
      |                          |                           |
      |                          long int                    unsigned int
      |                        %d
RStarTree.c:854:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
  854 |     fprintf(stderr,"%s %ld\n","sizeof(typparameters):",sizeof(typparameters));
      |                        ~~^                             ~~~~~~~~~~~~~~~~~~~~~
      |                          |                             |
      |                          long int                      unsigned int
      |                        %d
RStarTree.c:855:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
  855 |     fprintf(stderr,"%s %ld\n","  sizeof(typfixblock):",sizeof(typfixblock));
      |                        ~~^                             ~~~~~~~~~~~~~~~~~~~
      |                          |                             |
      |                          long int                      unsigned int
      |                        %d
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInstDel.lo `test -f 'RSTInstDel.c' || echo './'`RSTInstDel.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
                 from RStarTree.h:28,
                 from RSTInstDel.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
RSTInstDel.c: In function 'SplitAndDistributData':
RSTInstDel.c:748:7: warning: 'axisindex' may be used uninitialized in this function [-Wmaybe-uninitialized]
  748 |       axisindex;
      |       ^~~~~~~~~
RSTInstDel.c:971:6: warning: 'axis' may be used uninitialized in this function [-Wmaybe-uninitialized]
  971 |   if (axis != (*par).maxdim || axsortside != currsortside) {
      |      ^
RSTInstDel.c:744:32: warning: 'axsortside' may be used uninitialized in this function [-Wmaybe-uninitialized]
  744 |   Side sortside, currsortside, axsortside;
      |                                ^~~~~~~~~~
RSTInstDel.c:952:8: warning: 'backvalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
  952 |     if (backvalvalue <= validvalue) {
      |        ^
RSTInstDel.c:952:8: warning: 'validvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
RSTInstDel.c:956:14: warning: 'backvaledge' may be used uninitialized in this function [-Wmaybe-uninitialized]
  956 |     validedge= validedge+backvaledge;
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
RSTInstDel.c:956:14: warning: 'validedge' may be used uninitialized in this function [-Wmaybe-uninitialized]
RSTInstDel.c: In function 'SplitAndDistributDir':
RSTInstDel.c:482:7: warning: 'axisindex' may be used uninitialized in this function [-Wmaybe-uninitialized]
  482 |       axisindex;
      |       ^~~~~~~~~
RSTInstDel.c:705:6: warning: 'axis' may be used uninitialized in this function [-Wmaybe-uninitialized]
  705 |   if (axis != (*par).maxdim || axsortside != currsortside) {
      |      ^
RSTInstDel.c:478:32: warning: 'axsortside' may be used uninitialized in this function [-Wmaybe-uninitialized]
  478 |   Side sortside, currsortside, axsortside;
      |                                ^~~~~~~~~~
RSTInstDel.c:686:8: warning: 'backvalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
  686 |     if (backvalvalue <= validvalue) {
      |        ^
RSTInstDel.c:686:8: warning: 'validvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
RSTInstDel.c:690:14: warning: 'backvaledge' may be used uninitialized in this function [-Wmaybe-uninitialized]
  690 |     validedge= validedge+backvaledge;
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
RSTInstDel.c:690:14: warning: 'validedge' may be used uninitialized in this function [-Wmaybe-uninitialized]
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTJoin.lo `test -f 'RSTJoin.c' || echo './'`RSTJoin.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
                 from RStarTree.h:28,
                 from RSTJoin.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTUtil.lo `test -f 'RSTUtil.c' || echo './'`RSTUtil.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
                 from RStarTree.h:28,
                 from RSTUtil.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
RSTUtil.c: In function 'Covers':
RSTUtil.c:204:7: warning: variable 'maxdim' set but not used [-Wunused-but-set-variable]
  204 |   int maxdim;
      |       ^~~~~~
RSTUtil.c: In function 'ChooseSubtree':
RSTUtil.c:546:16: warning: variable 'inv' set but not used [-Wunused-but-set-variable]
  546 |   int maxexam, inv;
      |                ^~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInOut.lo `test -f 'RSTInOut.c' || echo './'`RSTInOut.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
                 from RStarTree.h:28,
                 from RSTInOut.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInterUtil.lo `test -f 'RSTInterUtil.c' || echo './'`RSTInterUtil.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
                 from RStarTree.h:28,
                 from RSTInterUtil.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
RSTInterUtil.c: In function 'SetCheckDir':
RSTInterUtil.c:208:7: warning: variable 'PACKEDSIZE_DIRnofentries' set but not used [-Wunused-but-set-variable]
  208 |       PACKEDSIZE_DIRnofentries, REALSIZE_DIRnofentries;
      |       ^~~~~~~~~~~~~~~~~~~~~~~~
RSTInterUtil.c:207:7: warning: variable 'PACKEDdirentrylen' set but not used [-Wunused-but-set-variable]
  207 |       PACKEDdirentrylen, REALdirentrylen,
      |       ^~~~~~~~~~~~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTQuery.lo `test -f 'RSTQuery.c' || echo './'`RSTQuery.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21,
                 from RStarTree.h:28,
                 from RSTQuery.c:4:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o libcSmRST.la  libcSmRST_la-RStarTree.lo libcSmRST_la-RSTInstDel.lo libcSmRST_la-RSTJoin.lo libcSmRST_la-RSTUtil.lo libcSmRST_la-RSTInOut.lo libcSmRST_la-RSTInterUtil.lo libcSmRST_la-RSTQuery.lo  
ar: `u' modifier ignored since `D' is the default (see `U')
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
Making all in kdt
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o xyz2kdt-xyz2kdt.o `test -f 'xyz2kdt.c' || echo './'`xyz2kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from xyz2kdt.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libkdt_la-kdt.lo `test -f 'kdt.c' || echo './'`kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from kdt.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
kdt.c:450:13: warning: 'kdt_rect_write' defined but not used [-Wunused-function]
  450 | static void kdt_rect_write (const KdtRect rect, FILE * fp)
      |             ^~~~~~~~~~~~~~
kdt.c:252:13: warning: 'kdt_write' defined but not used [-Wunused-function]
  252 | static void kdt_write (KdtHeap * h, FILE * fp)
      |             ^~~~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o libkdt.la  libkdt_la-kdt.lo  
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o xyz2kdt xyz2kdt-xyz2kdt.o -lkdt -lm 
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdt2kdt-kdt2kdt.o `test -f 'kdt2kdt.c' || echo './'`kdt2kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from kdt2kdt.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o kdt2kdt kdt2kdt-kdt2kdt.o -lkdt -lm 
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdtquery-kdtquery.o `test -f 'kdtquery.c' || echo './'`kdtquery.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from kdtquery.c:21:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o kdtquery kdtquery-kdtquery.o -lkdt -lm 
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
Making all in fes2004
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_alloc.lo `test -f 'fes2004_alloc.c' || echo './'`fes2004_alloc.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from fes2004_lib.h:12,
                 from fes2004_alloc.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_error.lo `test -f 'fes2004_error.c' || echo './'`fes2004_error.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from fes2004_error.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
fes2004_error.c:4:6: warning: no previous prototype for 'print_error_1' [-Wmissing-prototypes]
    4 | void print_error_1()
      |      ^~~~~~~~~~~~~
fes2004_error.c:11:6: warning: no previous prototype for 'print_error_2' [-Wmissing-prototypes]
   11 | void print_error_2()
      |      ^~~~~~~~~~~~~
fes2004_error.c:18:6: warning: no previous prototype for 'print_error_3' [-Wmissing-prototypes]
   18 | void print_error_3(char *message)
      |      ^~~~~~~~~~~~~
fes2004_error.c:25:6: warning: no previous prototype for 'print_error_4' [-Wmissing-prototypes]
   25 | void print_error_4(char *message)
      |      ^~~~~~~~~~~~~
fes2004_error.c:32:6: warning: no previous prototype for 'print_error_5' [-Wmissing-prototypes]
   32 | void print_error_5(char *message)
      |      ^~~~~~~~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_extraction.lo `test -f 'fes2004_extraction.c' || echo './'`fes2004_extraction.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from fes2004_lib.h:12,
                 from fes2004_extraction.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_init.lo `test -f 'fes2004_init.c' || echo './'`fes2004_init.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from fes2004_lib.h:12,
                 from fes2004_init.c:2:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
fes2004_init.c: In function 'init_spectrum':
fes2004_init.c:42:7: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable]
   42 |   int rstatus;
      |       ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_io.lo `test -f 'fes2004_io.c' || echo './'`fes2004_io.c
In file included from /usr/include/errno.h:25,
                 from /usr/include/netcdf.h:17,
                 from fes2004_io.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
fes2004_io.c: In function 'load_netcdf_fes2004_data':
fes2004_io.c:16:9: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable]
   16 |   int i,rstatus;
      |         ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_prediction.lo `test -f 'fes2004_prediction.c' || echo './'`fes2004_prediction.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from fes2004_lib.h:12,
                 from fes2004_prediction.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_kernel.lo `test -f 'fes2004_kernel.c' || echo './'`fes2004_kernel.c
In file included from /usr/include/errno.h:25,
                 from /usr/include/netcdf.h:17,
                 from fes2004_kernel.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
fes2004_kernel.c: In function 'pred_coeur':
fes2004_kernel.c:115:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable]
  115 |   double pi;
      |          ^~
fes2004_kernel.c: In function 'extract_coeur':
fes2004_kernel.c:191:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable]
  191 |   double pi;
      |          ^~
fes2004_kernel.c: In function 'compute_admittance':
fes2004_kernel.c:457:11: warning: variable 'gsl_out' set but not used [-Wunused-but-set-variable]
  457 |   int i,n,gsl_out;
      |           ^~~~~~~
fes2004_kernel.c: In function 'astronomic_angle':
fes2004_kernel.c:663:16: warning: variable 'sin2I' set but not used [-Wunused-but-set-variable]
  663 |   double t2,t4,sin2I,s2;
      |                ^~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o libfes.la  libfes_la-fes2004_alloc.lo libfes_la-fes2004_error.lo libfes_la-fes2004_extraction.lo libfes_la-fes2004_init.lo libfes_la-fes2004_io.lo libfes_la-fes2004_prediction.lo libfes_la-fes2004_kernel.lo  
ar: `u' modifier ignored since `D' is the default (see `U')
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
Making all in wavewatch
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
Making all in culvert
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_inlet-check_inlet.o `test -f 'check_inlet.c' || echo './'`check_inlet.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from check_inlet.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libboyd87_la-boyd87.lo `test -f 'boyd87.c' || echo './'`boyd87.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from boyd87.c:9:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o libboyd87.la  libboyd87_la-boyd87.lo  
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o check_inlet check_inlet-check_inlet.o -lboyd87 -lm 
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_outlet-check_outlet.o `test -f 'check_outlet.c' || echo './'`check_outlet.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from check_outlet.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o check_outlet check_outlet-check_outlet.o -lboyd87 -lm 
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o discharge_table-discharge_table.o `test -f 'discharge_table.c' || echo './'`discharge_table.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from discharge_table.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o discharge_table discharge_table-discharge_table.o -lboyd87 -lm 
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface2kdt.o `test -f 'rsurface2kdt.c' || echo './'`rsurface2kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from rsurface2kdt.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface.o `test -f 'rsurface.c' || echo './'`rsurface.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from rsurface.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
In file included from rsurface.c:5:
rsurface.h:16:1: warning: no semicolon at end of struct or union
   16 | } RSurfaceSum;
      | ^
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o rsurface2kdt rsurface2kdt-rsurface2kdt.o rsurface2kdt-rsurface.o -LRStarTree -lcSmRST -Lkdt -lkdt -lm 
libtool: warning: '-version-info' is ignored for programs
libtool: warning: '-release' is ignored for programs
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon2D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from particulatecommon.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulatecommon2D.la  libparticulatecommon2D_la-particulatecommon.lo  
libtool: warning: '-version-info/-version-number' is ignored for convenience libraries
libtool: warning: '-release' is ignored for convenience libraries
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon3D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from particulatecommon.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulatecommon3D.la  libparticulatecommon3D_la-particulatecommon.lo  
libtool: warning: '-version-info/-version-number' is ignored for convenience libraries
libtool: warning: '-release' is ignored for convenience libraries
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libterrain2D_la-terrain.lo `test -f 'terrain.c' || echo './'`terrain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from terrain.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libterrain2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libterrain2D_la-terrain.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o terrain.lo terrain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from terrain.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libterrain3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris terrain.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates2D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from ../src/particle.h:27,
                 from particulatecommon.h:20,
                 from particulates.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulates2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates2D_la-particulates.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates3D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from ../src/particle.h:27,
                 from particulatecommon.h:20,
                 from particulates.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulates3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates3D_la-particulates.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada2D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from okada.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libokada2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada2D_la-okada.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada3D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from okada.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libokada3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada3D_la-okada.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libdf33D_la-df3.lo `test -f 'df3.c' || echo './'`df3.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from df3.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libdf33D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libdf33D_la-df3.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro2D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/fluid.h:23,
                 from ../src/boundary.h:23,
                 from ../src/domain.h:23,
                 from ../src/simulation.h:27,
                 from electrohydro.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libelectrohydro2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro2D_la-electrohydro.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro3D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/fluid.h:23,
                 from ../src/boundary.h:23,
                 from ../src/domain.h:23,
                 from ../src/simulation.h:27,
                 from electrohydro.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libelectrohydro3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro3D_la-electrohydro.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric2D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/fluid.h:23,
                 from ../src/boundary.h:23,
                 from ../src/domain.h:23,
                 from ../src/simulation.h:27,
                 from skewsymmetric.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
skewsymmetric.c: In function 'gfs_skew_symmetric_run':
skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable]
  591 |   GfsVariable * p,  * res = NULL, * gmac[FTT_DIMENSION];
      |                       ^~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libskewsymmetric2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric2D_la-skewsymmetric.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric3D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/fluid.h:23,
                 from ../src/boundary.h:23,
                 from ../src/domain.h:23,
                 from ../src/simulation.h:27,
                 from skewsymmetric.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
skewsymmetric.c: In function 'gfs_skew_symmetric_run':
skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable]
  591 |   GfsVariable * p,  * res = NULL, * gmac[FTT_DIMENSION];
      |                       ^~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libskewsymmetric3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric3D_la-skewsymmetric.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics2D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/solid.h:23,
                 from topics.c:21:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
In file included from ../src/timestep.h:29,
                 from ../src/simulation.h:28,
                 from ../src/event.h:53,
                 from ../src/solid.h:26,
                 from topics.c:21:
topics.c: In function 'print_interface':
topics.c:1139:38: warning: array subscript 2 is above array bounds of 'GfsVariable *[2]' {aka 'struct _GfsVariable *[2]'} [-Warray-bounds]
 1139 |     double nz = GFS_VALUE(cell, tv->m[2]);
../src/variable.h:76:74: note: in definition of macro 'GFS_VALUE'
   76 | #define GFS_VALUE(cell,v)            ((&GFS_STATE (cell)->place_holder)[(v)->i])
      |                                                                          ^
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtopics2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics2D_la-topics.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics3D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/solid.h:23,
                 from topics.c:21:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtopics3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics3D_la-topics.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libculvert2D_la-culvert.lo `test -f 'culvert.c' || echo './'`culvert.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from ../src/source.h:27,
                 from ../src/river.h:27,
                 from culvert.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libculvert2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libculvert2D_la-culvert.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lculvert -lboyd87 -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o liblayered2D_la-layered.lo `test -f 'layered.c' || echo './'`layered.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/fluid.h:23,
                 from ../src/boundary.h:23,
                 from ../src/domain.h:23,
                 from ../src/simulation.h:27,
                 from layered.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o liblayered2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris liblayered2D_la-layered.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide2D_la-tide.lo `test -f 'tide.c' || echo './'`tide.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/string.h:26,
                 from tide.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtide2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide2D_la-tide.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide3D_la-tide.lo `test -f 'tide.c' || echo './'`tide.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/string.h:26,
                 from tide.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtide3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide3D_la-tide.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes2D_la-stokes.lo `test -f 'stokes.c' || echo './'`stokes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from stokes.c:19:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=F77   --mode=compile f77  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -c -o CW263.lo CW263.f
CW263.f:45:72:

   45 |    31 write(*,'(f9.3,8f8.3,1x,a)') xx,yy,uu,vv,ut,vt,du,dv,etah,ans
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 31 at (1)
CW263.f:61:72:

   61 |    32 write(*,'(f9.3,8f8.3,1x,1a)') xx,yy,uu,vv,ut,vt,du,dv,etah
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 32 at (1)
CW263.f:73:72:

   73 |    33 write(*,'(f9.3,8f8.3)') xx,etah,uu,vv,ut,vt,du,dv,etah
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 33 at (1)
CW263.f:126:72:

  126 |    10 amp(i)= 0.0
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:155:72:

  155 |    14    amp(i)= (h/hm)*amp(i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1)
CW263.f:209:72:

  209 |       do 10 j=1,nfun-1
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1)
CW263.f:210:72:

  210 |    10 x(i)= x(i)+cos(j*th)*amp(j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:217:72:

  217 |    11 etas(i)= eta(i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1)
CW263.f:219:72:

  219 |    12 etas(nfun+i)= eta(nfun-i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1)
CW263.f:253:72:

  253 |    40 eta(i)= x(i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
CW263.f:257:72:

  257 |    10 sm= sm+eta(i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:272:72:

  272 |       do 18 j=1,nfun-2
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 18 at (1)
CW263.f:296:72:

  296 |       do 23 n=1,nfun
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 23 at (1)
CW263.f:304:72:

  304 |    23 shcs(i,n)= sh*cs
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 23 at (1)
CW263.f:311:72:

  311 |       do 12 j=2,nfun
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 12 at (1)
CW263.f:314:72:

  314 |    12 df(i,j)= chcs(i,n)*n*k
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1)
CW263.f:320:72:

  320 |       do 41 j=1,nfun-2
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 41 at (1)
CW263.f:323:72:

  323 |    42 dij= dij+da(i,n)*dex(n,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 42 at (1)
CW263.f:324:72:

  324 |    41 dax(i,j)= dij
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 41 at (1)
CW263.f:331:72:

  331 |    13 sm= sm+da(i,m)*s(m)/k
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1)
CW263.f:332:72:

  332 |    19 dax(i,nfun-1)= sm
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 19 at (1)
CW263.f:340:72:

  340 |       do 24 j=1,nfun-1
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 24 at (1)
CW263.f:345:72:

  345 |    24 dcx(i,j)= r*dax(i,j)+a(i)*drx
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 24 at (1)
CW263.f:354:72:

  354 |    15 sv= sv+n*k*c(n+1)*shsn(i,n)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 15 at (1)
CW263.f:356:72:

  356 |    14 vs(i)= sv
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1)
CW263.f:360:72:

  360 |    16 sm= sm+f(i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1)
CW263.f:365:72:

  365 |    17 sq= sq+f(i)**2
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 17 at (1)
CW263.f:376:72:

  376 |    22 sv= sv+n*k*dcx(n+1,j)*shsn(i,n)+(n*k)**2*c(n+1)*chsn(i,n)*dex(i,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 22 at (1)
CW263.f:378:72:

  378 |    21 dvx(i,j)= sv
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 21 at (1)
CW263.f:386:72:

  386 |      :     n**2*k*s(i)*c(n+1)*chsn(i,n)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 25 at (1)
CW263.f:388:72:

  388 |    20 dvx(i,j)= sv
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
CW263.f:393:72:

  393 |       do 44 j=1,nfun-1
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 44 at (1)
CW263.f:394:72:

  394 |    44 dfx(i,j)= (us(i)*dux(i,j)+vs(i)*dvx(i,j))/g+dex(i,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 44 at (1)
CW263.f:399:72:

  399 |    46 sm= sm+dfx(i,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 46 at (1)
CW263.f:401:72:

  401 |       do 45 i=1,nfun
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 45 at (1)
CW263.f:402:72:

  402 |    45 jac(i,j)= dfx(i,j)-sm
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 45 at (1)
CW263.f:419:72:

  419 |       do 10 j=1,n
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1)
CW263.f:420:72:

  420 |    10 c(i,j)= 0.0d0
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:424:72:

  424 |    54 st= st+f(i,1)**2
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 54 at (1)
CW263.f:428:72:

  428 |    16 g(i,1)= f(i,1)/st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1)
CW263.f:435:72:

  435 |    20 st= st+g(i,j)*f(i,k)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
CW263.f:436:72:

  436 |    29 c(j,k)= st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 29 at (1)
CW263.f:441:72:

  441 |    22 st= st+c(j,k)*g(i,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 22 at (1)
CW263.f:442:72:

  442 |    21 g(i,k)= f(i,k)-st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 21 at (1)
CW263.f:445:72:

  445 |    50 st= st+g(i,k)**2
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 50 at (1)
CW263.f:448:72:

  448 |    52 g(i,k)= g(i,k)/st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 52 at (1)
CW263.f:453:72:

  453 |   202 st= st+g(i,j)*g(i,k)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 202 at (1)
CW263.f:454:72:

  454 |   200 db(j)= st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
CW263.f:458:72:

  458 |   206 st= st+db(j)*g(i,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 206 at (1)
CW263.f:459:72:

  459 |   204 g(i,k)=g(i,k)-st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 204 at (1)
CW263.f:464:72:

  464 |    26 st= st+g(i,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 26 at (1)
CW263.f:465:72:

  465 |    24 b(j)= st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 24 at (1)
CW263.f:470:72:

  470 |   210 sb= sb+b(j)*g(i,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 210 at (1)
CW263.f:471:72:

  471 |   208 st= st+(sb-1.0d0)**2
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 208 at (1)
CW263.f:476:72:

  476 |    30 st= st+cr(i,j)*b(j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at (1)
CW263.f:477:72:

  477 |    28 a(i)= st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 28 at (1)
CW263.f:482:72:

  482 |    74 sb= sb+a(j)*f(i,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 74 at (1)
CW263.f:483:72:

  483 |    72 st= st+(sb-1.0d0)**2
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 72 at (1)
CW263.f:487:72:

  487 |       do 81 j=1,n
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 81 at (1)
CW263.f:488:72:

  488 |    81 dc(i,j)= 0.0d0
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 81 at (1)
CW263.f:493:72:

  493 |      :     -0.5d0*dly(1)*c(1,j)/c(1,1)**2
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 82 at (1)
CW263.f:498:72:

  498 |    86 st= st+c(m,l)*dc(m,l)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 86 at (1)
CW263.f:506:72:

  506 |    90 st= st+c(j,m)*dc(j,l)+dc(j,m)*c(j,l)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 90 at (1)
CW263.f:508:72:

  508 |      :     -st/c(l,l)-0.5d0*dly(l)*c(l,m)/c(l,l)**2
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 85 at (1)
CW263.f:511:72:

  511 |       do 92 m=1,n
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 92 at (1)
CW263.f:514:72:

  514 |    96 st= st+g(l,j)*dc(j,m)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 96 at (1)
CW263.f:515:72:

  515 |    92 br(l,m)= -st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 92 at (1)
CW263.f:517:72:

  517 |    94 br(k,m)= br(k,m)+df(k,m)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 94 at (1)
CW263.f:523:72:

  523 |    36 st= st+br(i,l)*cr(l,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 36 at (1)
CW263.f:524:72:

  524 |    34 sb= sb+st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 34 at (1)
CW263.f:525:72:

  525 |    32 db(j)= sb
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 32 at (1)
CW263.f:529:72:

  529 |    40 st= st-dc(i,j)*a(j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at (1)
CW263.f:530:72:

  530 |    38 dly(i)= st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 38 at (1)
CW263.f:534:72:

  534 |    44 st= st+cr(i,j)*dly(j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 44 at (1)
CW263.f:535:72:

  535 |    42 da(i,k)= st
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 42 at (1)
CW263.f:550:72:

  550 |       do 10 j=1,n
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1)
CW263.f:551:72:

  551 |    10 w(i,j)= 0.0d0
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:562:72:

  562 |    14 sum= sum+c(i,m)*w(m,j)/c(m,m)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1)
CW263.f:563:72:

  563 |    13 w(i,j)= -sum
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1)
CW263.f:567:72:

  567 |       do 16 j=1,n
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 16 at (1)
CW263.f:568:72:

  568 |    16 w(i,j)= w(i,j)/sum
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1)
CW263.f:632:72:

  632 |     4 a(k,j)= a(k,j)/c
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 4 at (1)
CW263.f:637:72:

  637 |     5 a(i,j)= a(i,j)-c*a(k,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 5 at (1)
CW263.f:638:72:

  638 |    10 b(i)= b(i)-c*b(k)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:648:72:

  648 |       do 200 j=k1,n
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 200 at (1)
CW263.f:649:72:

  649 |   200 b(k)= b(k)-a(k,j)*b(j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 200 at (1)
CW263.f:651:72:

  651 |   300 cc(i)= b(i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 300 at (1)
CW263.f:676:72:

  676 |    16 xcm(i)= xc(i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 16 at (1)
CW263.f:687:72:

  687 |    18    xc(i)= xcm(i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 18 at (1)
CW263.f:694:72:

  694 |       do 10 j=1,nv
      |                                                                        1
Warning: Fortran 2018 deleted feature: Shared DO termination label 10 at (1)
CW263.f:697:72:

  697 |    11 ra= ra+fjacc(l,i)*fjacc(l,j)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1)
CW263.f:698:72:

  698 |    10 aa(i,j)= ra
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:703:72:

  703 |    13 ra= ra+fvecc(l)*fjacc(l,i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 13 at (1)
CW263.f:704:72:

  704 |    12 bb(i)= -ra
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1)
CW263.f:711:72:

  711 |    14 xc(i)= xc(i)+orf*cc(i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at (1)
CW263.f:745:72:

  745 |    10 sm=sm+f(i)**2
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:822:72:

  822 |    12 um= t*ul-u0+f(m)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at (1)
CW263.f:824:72:

  824 |    10 b(k)= s*vl*um*rn
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
CW263.f:856:72:

  856 |    11 etah= etah+cos(i*theta)*amp(i)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at (1)
CW263.f:873:72:

  873 |    10 s4= s4+i*i*sh*cs*c(ip)
      |                                                                        1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at (1)
/bin/bash ../libtool --silent  --tag=F77   --mode=link f77  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libstokes2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes2D_la-stokes.lo CW263.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes3D_la-stokes.lo `test -f 'stokes.c' || echo './'`stokes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from stokes.c:19:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=F77   --mode=link f77  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libstokes3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes3D_la-stokes.lo CW263.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles2D_la-bubbles.lo `test -f 'bubbles.c' || echo './'`bubbles.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from ../src/particle.h:27,
                 from particulatecommon.h:20,
                 from bubbles.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
bubbles.c: In function 'bubble_fraction_init':
bubbles.c:421:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, struct <anonymous> *)'} [-Wincompatible-pointer-types]
  421 |   GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles;
      |                                                ^
bubbles.c: In function 'bubble_fraction_dt_init':
bubbles.c:474:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, struct <anonymous> *)'} [-Wincompatible-pointer-types]
  474 |   GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles;
      |                                                ^
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libbubbles2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles2D_la-bubbles.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles3D_la-bubbles.lo `test -f 'bubbles.c' || echo './'`bubbles.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from ../src/particle.h:27,
                 from particulatecommon.h:20,
                 from bubbles.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
bubbles.c: In function 'bubble_fraction_init':
bubbles.c:421:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, struct <anonymous> *)'} [-Wincompatible-pointer-types]
  421 |   GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles;
      |                                                ^
bubbles.c: In function 'bubble_fraction_dt_init':
bubbles.c:474:48: warning: assignment to 'void (*)(FttCell *, GfsVariable *, GfsParticulate *)' {aka 'void (*)(struct _FttCell *, struct _GfsVariable *, struct _GfsParticulate *)'} from incompatible pointer type 'void (*)(FttCell *, BubbleData *)' {aka 'void (*)(struct _FttCell *, struct <anonymous> *)'} [-Wincompatible-pointer-types]
  474 |   GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles;
      |                                                ^
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libbubbles3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles3D_la-bubbles.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making all in tools
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl2D-gfs2oogl.o `test -f 'gfs2oogl.c' || echo './'`gfs2oogl.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from gfs2oogl.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
gfs2oogl.c: In function 'main':
gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations]
  891 |       streamname = g_strdup (g_basename (optarg));
      |       ^~~~~~~~~~
In file included from /usr/include/glib-2.0/glib.h:48,
                 from /usr/include/gts.h:24,
                 from ../src/init.h:23,
                 from gfs2oogl.c:31:
/usr/include/glib-2.0/glib/gfileutils.h:163:14: note: declared here
  163 | const gchar *g_basename         (const gchar *file_name);
      |              ^~~~~~~~~~
gfs2oogl.c:706:28: warning: variable 'lines' set but not used [-Wunused-but-set-variable]
  706 |   gboolean ribbon = FALSE, lines = FALSE, squares = FALSE;
      |                            ^~~~~
gfs2oogl.c:706:12: warning: variable 'ribbon' set but not used [-Wunused-but-set-variable]
  706 |   gboolean ribbon = FALSE, lines = FALSE, squares = FALSE;
      |            ^~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfs2oogl2D gfs2oogl2D-gfs2oogl.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl.o gfs2oogl.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from gfs2oogl.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
gfs2oogl.c: In function 'main':
gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations]
  891 |       streamname = g_strdup (g_basename (optarg));
      |       ^~~~~~~~~~
In file included from /usr/include/glib-2.0/glib.h:48,
                 from /usr/include/gts.h:24,
                 from ../src/init.h:23,
                 from gfs2oogl.c:31:
/usr/include/glib-2.0/glib/gfileutils.h:163:14: note: declared here
  163 | const gchar *g_basename         (const gchar *file_name);
      |              ^~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfs2oogl3D gfs2oogl.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o streamanime.o streamanime.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from streamanime.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o streamanime streamanime.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ppmcombine-ppmcombine.o `test -f 'ppmcombine.c' || echo './'`ppmcombine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from ppmcombine.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
ppmcombine.c: In function 'main':
ppmcombine.c:36:12: warning: variable 'verbose' set but not used [-Wunused-but-set-variable]
   36 |   gboolean verbose = FALSE;
      |            ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o ppmcombine ppmcombine-ppmcombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare2D-gfscompare.o `test -f 'gfscompare.c' || echo './'`gfscompare.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from gfscompare.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
gfscompare.c: In function 'main':
gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable]
  319 |   gboolean no_check = FALSE;
      |            ^~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfscompare2D gfscompare2D-gfscompare.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare.o gfscompare.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from gfscompare.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
gfscompare.c: In function 'main':
gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable]
  319 |   gboolean no_check = FALSE;
      |            ^~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfscompare3D gfscompare.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine2D-gfscombine.o `test -f 'gfscombine.c' || echo './'`gfscombine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from gfscombine.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfscombine2D gfscombine2D-gfscombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine.o gfscombine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/math.h:27,
                 from gfscombine.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfscombine3D gfscombine.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2D-gfsjoin2.o `test -f 'gfsjoin2.c' || echo './'`gfsjoin2.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from gfsjoin2.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfsjoin2D gfsjoin2D-gfsjoin2.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2.o gfsjoin2.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from gfsjoin2.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfsjoin3D gfsjoin2.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o shapes.o shapes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/stdlib.h:25,
                 from shapes.c:20:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
shapes.c:288:13: warning: 'surface_add_rectangular_channel_shape' defined but not used [-Wunused-function]
  288 | static void surface_add_rectangular_channel_shape (GtsSurface * s,
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o shapes shapes.o -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
Making all in test
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
Making all in doc
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
ls ../src/*.[ch] | awk 'BEGIN{print "reference: \\"}{ print "\t" $1 " \\"}' > Makefile.deps
Making all in tutorial
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
Making all in examples
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-classes.o `test -f 'classes.c' || echo './'`classes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/string.h:26,
                 from classes.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-init.o `test -f '../../src/init.c' || echo './'`../../src/init.c
../../src/init.c:33: warning: "_GNU_SOURCE" redefined
   33 | # define _GNU_SOURCE
      | 
<command-line>: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/fenv.h:26,
                 from ../../src/init.c:34:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o classes classes-classes.o classes-init.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o modules-modules.o `test -f 'modules.c' || echo './'`modules.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/limits.h:26,
                 from /usr/lib/gcc/arm-linux-gnueabihf/9/include-fixed/limits.h:194,
                 from /usr/lib/gcc/arm-linux-gnueabihf/9/include-fixed/syslimits.h:7,
                 from /usr/lib/gcc/arm-linux-gnueabihf/9/include-fixed/limits.h:34,
                 from /usr/lib/arm-linux-gnueabihf/glib-2.0/include/glibconfig.h:11,
                 from /usr/include/glib-2.0/glib/gtypes.h:32,
                 from /usr/include/glib-2.0/glib/galloca.h:32,
                 from /usr/include/glib-2.0/glib.h:30,
                 from /usr/include/glib-2.0/gmodule.h:28,
                 from modules.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o modules modules-modules.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
./modules ../../modules/*.la /usr/lib/arm-linux-gnueabihf/gerris/*.so | LC_ALL=C sort | uniq > modules.list
(./classes && sh ./modulesyms.sh ../../modules /usr/lib/arm-linux-gnueabihf/gerris) | LC_ALL=C sort > gerris.dic
echo "# Language file for source-highlight" > gfs.lang
echo "# Generated automatically by classes.c" >> gfs.lang
awk '{ printf ("classname = \"%s\"\n", $1) }' < gerris.dic >> gfs.lang
echo "include \"/usr/share/source-highlight/cpp.lang\"" >> gfs.lang
echo "comment start \"#\"" >> gfs.lang
echo "redef preproc = \"C preprocessor command is not compatible with the use of # as comment character in GTS\"" >> gfs.lang
echo "(defvar gfs-abbrevs '(" > gfs-keywords.el
awk '{ printf ("\"%s\"\n", $1) }' < gerris.dic >> gfs-keywords.el
echo ")" >> gfs-keywords.el
echo "\"Gerris keywords automatically generated by classes.c.\")" >> gfs-keywords.el
echo "(defvar gfs-modules '(" >> gfs-keywords.el
awk '{ printf ("\"%s\"\n", $1) }' < modules.list >> gfs-keywords.el
echo ")" >> gfs-keywords.el
echo "\"Gerris modules automatically generated by modules.c.\")" >> gfs-keywords.el
echo "(provide 'gfs-keywords)" >> gfs-keywords.el
sh ./gfs.php.sh > gfs.php
make  all-am
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[5]: Nothing to be done for 'all-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
Making all in manpages
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-autoclass.o `test -f 'autoclass.c' || echo './'`autoclass.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/string.h:26,
                 from autoclass.c:1:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
autoclass.c: In function 'main':
autoclass.c:6:21: warning: variable 'klass' set but not used [-Wunused-but-set-variable]
    6 |   GtsObjectClass ** klass;
      |                     ^~~~~
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-init.o `test -f '../src/init.c' || echo './'`../src/init.c
../src/init.c:33: warning: "_GNU_SOURCE" redefined
   33 | # define _GNU_SOURCE
      | 
<command-line>: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
                 from /usr/include/fenv.h:26,
                 from ../src/init.c:34:
/usr/include/features.h:185:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
  185 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
      |   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o autoclass autoclass-autoclass.o autoclass-init.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
Making all in desktop
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
Making all in debian
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[2]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
   dh_auto_test -a
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a
   dh_prep -a
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_install
	make -j1 install DESTDIR=/<<BUILDDIR>>/gerris-20131206\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
Making install in src
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make  install-am
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
 /bin/bash ../libtool --silent   --mode=install /usr/bin/install -c   libgfs2D.la libgfs3D.la '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
  /bin/bash ../libtool --silent   --mode=install /usr/bin/install -c gerris2D gerris3D '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include'
 /usr/bin/install -c -m 644 gfs.h '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
 /usr/bin/install -c -m 644 gerris2D.pc gerris3D.pc '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
 /usr/bin/install -c -m 644 m4.awk '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include/gerris'
 /usr/bin/install -c -m 644 ftt.h fluid.h variable.h output.h solid.h poisson.h advection.h boundary.h mpi_boundary.h timestep.h domain.h init.h refine.h event.h simulation.h graphic.h adaptive.h source.h tension.h vof.h utils.h ocean.h wave.h levelset.h isocube.h cartesian.h surface.h unstructured.h map.h river.h moving.h balance.h metric.h particle.h version.h spatial.h function.h '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include/gerris'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
Making install in modules
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making install in RStarTree
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
Making install in kdt
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
  /bin/bash ../../libtool --silent   --mode=install /usr/bin/install -c xyz2kdt kdt2kdt kdtquery '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
Making install in fes2004
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
Making install in wavewatch
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
Making install in culvert
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
  /bin/bash ../libtool --silent   --mode=install /usr/bin/install -c rsurface2kdt '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris'
 /bin/bash ../libtool --silent   --mode=install /usr/bin/install -c   libterrain2D.la libterrain3D.la libparticulates2D.la libparticulates3D.la libokada2D.la libokada3D.la libdf33D.la libelectrohydro2D.la libelectrohydro3D.la libskewsymmetric2D.la libskewsymmetric3D.la libtopics2D.la libtopics3D.la libculvert2D.la liblayered2D.la libtide2D.la libtide3D.la libstokes2D.la libstokes3D.la libbubbles2D.la libbubbles3D.la '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris'
libtool: warning: relinking 'libterrain2D.la'
libtool: warning: relinking 'libterrain3D.la'
libtool: warning: relinking 'libparticulates2D.la'
libtool: warning: relinking 'libparticulates3D.la'
libtool: warning: relinking 'libokada2D.la'
libtool: warning: relinking 'libokada3D.la'
libtool: warning: relinking 'libdf33D.la'
libtool: warning: relinking 'libelectrohydro2D.la'
libtool: warning: relinking 'libelectrohydro3D.la'
libtool: warning: relinking 'libskewsymmetric2D.la'
libtool: warning: relinking 'libskewsymmetric3D.la'
libtool: warning: relinking 'libtopics2D.la'
libtool: warning: relinking 'libtopics3D.la'
libtool: warning: relinking 'libculvert2D.la'
libtool: warning: relinking 'liblayered2D.la'
libtool: warning: relinking 'libtide2D.la'
libtool: warning: relinking 'libtide3D.la'
libtool: warning: relinking 'libstokes2D.la'
libtool: warning: relinking 'libstokes3D.la'
libtool: warning: relinking 'libbubbles2D.la'
libtool: warning: relinking 'libbubbles3D.la'
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf/gerris'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making install in tools
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
  /bin/bash ../libtool --silent   --mode=install /usr/bin/install -c gfs2oogl2D gfs2oogl3D streamanime ppmcombine gfscompare2D gfscompare3D gfscombine2D gfscombine3D gfsjoin2D gfsjoin3D shapes '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
 /usr/bin/install -c darcs2dist bat2gts ppm2mpeg ppm2theora ppm2video gfs2gfs gfsjoin gfsplot '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
Making install in test
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
Making install in doc
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
Making install in tutorial
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
Making install in examples
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make  install-am
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[6]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
 /usr/bin/install -c gfs2doc gfs-highlight gfsxref '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
 /usr/bin/install -c -m 644 gfs2tex.py gfs.lang gerris.dic gfs-keywords.el gfs-mode.el gfs.sty gfs.hva kaltura.sh gfs.php '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
make[6]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
Making install in manpages
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[5]: Nothing to be done for 'install-exec-am'.
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1'
 /usr/bin/install -c -m 644 bat2gts.1 gerris2D.1 gerris3D.1 gfs2gfs.1 gfs2oogl2D.1 gfs2oogl3D.1 gfscompare2D.1 gfscompare3D.1 gfs-config.1 gfs-highlight.1 gfsjoin.1 gfsxref.1 ppm2mpeg.1 ppmcombine.1 rsurfacequery.1 rsurfaceinfo.1 shapes.1 streamanime.1 xyz2rsurface.1 gfsjoin2D.1 gfsjoin3D.1 '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
Making install in desktop
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[4]: Nothing to be done for 'install-exec-am'.
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes'
 /usr/bin/install -c -m 644 application-gerris.png application-gerris-2D.png application-gerris-3D.png application-gerris-compressed.png '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages'
 /usr/bin/install -c -m 644 gerris.xml '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
Making install in debian
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[4]: Nothing to be done for 'install-exec-am'.
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
 /usr/bin/install -c build_function libtool '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[2]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
find /<<BUILDDIR>>/gerris-20131206+dfsg/debian/ -name "*.la" | xargs rm -f
sed -i -e "s/mpicc/gcc/g" /<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris/build_function
rm -rf /<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin/darcs2dist
rm -rf /<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin/gfs2doc
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
   dh_install -a
   dh_installdocs -a
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_installchangelogs ChangeLog
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
   dh_installman -a
   dh_lintian -a
   dh_icons -a
   dh_perl -a
   dh_link -a
   dh_strip_nondeterminism -a
   dh_compress -a
   dh_fixperms -a
   dh_missing -a
dh_missing: warning: usr/lib/arm-linux-gnueabihf/libgfs2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/libgfs3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D-1.3.so.2.0.0 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D-1.3.so.2 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D.so exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libterrain3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libparticulates3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libokada3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libdf33D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libelectrohydro3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libskewsymmetric3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtopics3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libculvert2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/liblayered2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libtide3D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles2D.a exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/arm-linux-gnueabihf/gerris/libbubbles3D.a exists in debian/tmp but is not installed to anywhere
	The following debhelper tools have reported what they installed (with files per package)
	 * dh_install: gerris (10), libgfs-1.3-2 (4), libgfs-dev (5)
	 * dh_installdocs: gerris (5), libgfs-1.3-2 (0), libgfs-dev (0)
	 * dh_installman: gerris (0), libgfs-1.3-2 (0), libgfs-dev (0)
	If the missing files are installed by another tool, please file a bug against it.
	When filing the report, if the tool is not part of debhelper itself, please reference the
	"Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+).
	  (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz)
	Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built
	For a short-term work-around: Add the files to debian/not-installed
   dh_dwz -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
   dh_installdeb -a
   dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package libgfs-dev: substitution variable ${shlibs:Depends} used, but is not defined
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package 'gerris' in '../gerris_20131206+dfsg-19_armhf.deb'.
dpkg-deb: building package 'gerris-dbgsym' in '../gerris-dbgsym_20131206+dfsg-19_armhf.deb'.
dpkg-deb: building package 'libgfs-1.3-2' in '../libgfs-1.3-2_20131206+dfsg-19_armhf.deb'.
dpkg-deb: building package 'libgfs-1.3-2-dbgsym' in '../libgfs-1.3-2-dbgsym_20131206+dfsg-19_armhf.deb'.
dpkg-deb: building package 'libgfs-dev' in '../libgfs-dev_20131206+dfsg-19_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../gerris_20131206+dfsg-19_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-02-16T12:18:48Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


gerris_20131206+dfsg-19_armhf.changes:
--------------------------------------

Format: 1.8
Date: Mon, 10 Feb 2020 20:37:14 +1100
Source: gerris
Binary: gerris gerris-dbgsym libgfs-1.3-2 libgfs-1.3-2-dbgsym libgfs-dev
Architecture: armhf
Version: 20131206+dfsg-19
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Stuart Prescott <stuart@debian.org>
Description:
 gerris     - Fluid Flow Solver
 libgfs-1.3-2 - Fluid Flow Solver -- shared libraries
 libgfs-dev - Fluid Flow Solver -- development libraries and headers
Closes: 943026
Changes:
 gerris (20131206+dfsg-19) unstable; urgency=medium
 .
   * Team upload.
   * Port to Python 3 (Closes: #943026).
   * Port to MPI 3.0.
   * Drop unneeded patch to use avconv rather than ffmpeg.
   * Update to debhelper-compat (= 12).
   * Update Standards-Version to 4.5.0 (no changes required).
   * Add Rules-Requries-Root: no.
   * Fix Vcs-* fields to point to salsa.
Checksums-Sha1:
 113aa4a76576d5a2fc4dc48763668c975bad4897 317280 gerris-dbgsym_20131206+dfsg-19_armhf.deb
 81ef645fb14d46b525adefd325eec9d8df377740 9374 gerris_20131206+dfsg-19_armhf.buildinfo
 e24584cc80ae2fb9a46b77473ee22cc52fcdc69e 280796 gerris_20131206+dfsg-19_armhf.deb
 c9152cd2936bd47e395d93a36d276db371ba32e8 1866800 libgfs-1.3-2-dbgsym_20131206+dfsg-19_armhf.deb
 9d8ed405c042d8c9ea7504786db655c365f081c6 476460 libgfs-1.3-2_20131206+dfsg-19_armhf.deb
 1fba2930bba14a421f2d77f04a01fdf4129ff598 103716 libgfs-dev_20131206+dfsg-19_armhf.deb
Checksums-Sha256:
 04ad15bf5fbba911d4677ba86cfe6288c8708424fe0651668ef684c137707460 317280 gerris-dbgsym_20131206+dfsg-19_armhf.deb
 476b2e7f438df3fda257e586b34da03e832eddaf687bd1cab94d068dfb7aa35b 9374 gerris_20131206+dfsg-19_armhf.buildinfo
 8141d9983dff6a35a38a39870b988f2877e0569d7e9f677ce66d45c04abfcdb9 280796 gerris_20131206+dfsg-19_armhf.deb
 707dbcb6d074d85db7b8fcc82ca0ce386eb7e4641cb3563aa6b445b1efd61c1e 1866800 libgfs-1.3-2-dbgsym_20131206+dfsg-19_armhf.deb
 6dafe25307517e8c016870c7f4bdaeaf5bab6e4c419c33d42bab8d9c87fd49fc 476460 libgfs-1.3-2_20131206+dfsg-19_armhf.deb
 0ba7a3d2f74f2f52ffe325f272d11a1261a537ef0b4c5aca92ad266b04e4768b 103716 libgfs-dev_20131206+dfsg-19_armhf.deb
Files:
 20806966365c72754e4ad1bac28545ac 317280 debug optional gerris-dbgsym_20131206+dfsg-19_armhf.deb
 fdc130f5a1693f61fdbe26b7b7e216c9 9374 science optional gerris_20131206+dfsg-19_armhf.buildinfo
 9c84b433b221a57183d325338a903327 280796 science optional gerris_20131206+dfsg-19_armhf.deb
 7a3a6974cfe3fdbe9dc0b6c58534a0e1 1866800 debug optional libgfs-1.3-2-dbgsym_20131206+dfsg-19_armhf.deb
 a1aeb47d9e6e39acf62c46ec4b5a539c 476460 devel optional libgfs-1.3-2_20131206+dfsg-19_armhf.deb
 718cb271464212579ae482f9a927a665 103716 libdevel optional libgfs-dev_20131206+dfsg-19_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


gerris-dbgsym_20131206+dfsg-19_armhf.deb
----------------------------------------

 new Debian package, version 2.0.
 size 317280 bytes: control archive=1468 bytes.
    1129 bytes,    12 lines      control              
    2100 bytes,    20 lines      md5sums              
 Package: gerris-dbgsym
 Source: gerris
 Version: 20131206+dfsg-19
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
 Installed-Size: 494
 Depends: gerris (= 20131206+dfsg-19)
 Section: debug
 Priority: optional
 Description: debug symbols for gerris
 Build-Ids: 0b35fda63ec5b8e56da256f0f17a9350c266f0bc 2fc5c26e76635d650c2d41adee118a38a84a11b6 3884a68c9838d874b215006a6b312e5ed4a5956a 4a1fac076f7141ca4fe89569cd01aaa6d58b8c8a 5bbfefd8c1eda22ef09ab81408a461fdf19d5df7 66dfc16386e5974b241b37bb933e48b2e6c437aa 6b47fb23ec8e74a31e5260c3d6436f7c882066b5 7ab5ef6ab1910e8adf9d9e08529aeb64f543c9bc 81bb80e23e308699f5914580009084b0ed01b0b4 95c8fc5e16b1f83d62b172e70a898f89e087bfd8 990dbcb37c7ce88fa82beb0dfe90ec420a0163c0 c1fc1104ab08c9cdbb2c2a1d594b73c4c7891c3e c3973f27c339720afe567981147c2a463fc6a683 d014658b9022341732dbdae71de4ee5e0a2743b0 d4401724b5f88cf75a916167a255e4b7e6a9d37b f0d4f9b1c1a5af8bf57e0ef11afa4f6628f23f37 f559aeacf2a689a38de436954e7d9c6cf1e8f524 f9e685f8e712cc2c67dc8a123a08a602564a0141 fbb194d4b262f79e29f5918a40c5e3c40b1eef42

drwxr-xr-x root/root         0 2020-02-10 09:37 ./
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/0b/
-rw-r--r-- root/root     11236 2020-02-10 09:37 ./usr/lib/debug/.build-id/0b/35fda63ec5b8e56da256f0f17a9350c266f0bc.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/2f/
-rw-r--r-- root/root     82996 2020-02-10 09:37 ./usr/lib/debug/.build-id/2f/c5c26e76635d650c2d41adee118a38a84a11b6.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/38/
-rw-r--r-- root/root     29728 2020-02-10 09:37 ./usr/lib/debug/.build-id/38/84a68c9838d874b215006a6b312e5ed4a5956a.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/4a/
-rw-r--r-- root/root     31920 2020-02-10 09:37 ./usr/lib/debug/.build-id/4a/1fac076f7141ca4fe89569cd01aaa6d58b8c8a.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/5b/
-rw-r--r-- root/root     30220 2020-02-10 09:37 ./usr/lib/debug/.build-id/5b/bfefd8c1eda22ef09ab81408a461fdf19d5df7.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/66/
-rw-r--r-- root/root     11236 2020-02-10 09:37 ./usr/lib/debug/.build-id/66/dfc16386e5974b241b37bb933e48b2e6c437aa.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/6b/
-rw-r--r-- root/root      8740 2020-02-10 09:37 ./usr/lib/debug/.build-id/6b/47fb23ec8e74a31e5260c3d6436f7c882066b5.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/7a/
-rw-r--r-- root/root     27788 2020-02-10 09:37 ./usr/lib/debug/.build-id/7a/b5ef6ab1910e8adf9d9e08529aeb64f543c9bc.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/81/
-rw-r--r-- root/root     10552 2020-02-10 09:37 ./usr/lib/debug/.build-id/81/bb80e23e308699f5914580009084b0ed01b0b4.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/95/
-rw-r--r-- root/root     19864 2020-02-10 09:37 ./usr/lib/debug/.build-id/95/c8fc5e16b1f83d62b172e70a898f89e087bfd8.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/99/
-rw-r--r-- root/root      7060 2020-02-10 09:37 ./usr/lib/debug/.build-id/99/0dbcb37c7ce88fa82beb0dfe90ec420a0163c0.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/c1/
-rw-r--r-- root/root     31580 2020-02-10 09:37 ./usr/lib/debug/.build-id/c1/fc1104ab08c9cdbb2c2a1d594b73c4c7891c3e.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/c3/
-rw-r--r-- root/root     19344 2020-02-10 09:37 ./usr/lib/debug/.build-id/c3/973f27c339720afe567981147c2a463fc6a683.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/d0/
-rw-r--r-- root/root     19876 2020-02-10 09:37 ./usr/lib/debug/.build-id/d0/14658b9022341732dbdae71de4ee5e0a2743b0.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/d4/
-rw-r--r-- root/root     25840 2020-02-10 09:37 ./usr/lib/debug/.build-id/d4/401724b5f88cf75a916167a255e4b7e6a9d37b.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/f0/
-rw-r--r-- root/root     16696 2020-02-10 09:37 ./usr/lib/debug/.build-id/f0/d4f9b1c1a5af8bf57e0ef11afa4f6628f23f37.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/f5/
-rw-r--r-- root/root     10664 2020-02-10 09:37 ./usr/lib/debug/.build-id/f5/59aeacf2a689a38de436954e7d9c6cf1e8f524.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/f9/
-rw-r--r-- root/root     20944 2020-02-10 09:37 ./usr/lib/debug/.build-id/f9/e685f8e712cc2c67dc8a123a08a602564a0141.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/fb/
-rw-r--r-- root/root     25812 2020-02-10 09:37 ./usr/lib/debug/.build-id/fb/b194d4b262f79e29f5918a40c5e3c40b1eef42.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root     22316 2020-02-10 09:37 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/gerris.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/share/doc/gerris-dbgsym -> gerris


gerris_20131206+dfsg-19_armhf.deb
---------------------------------

 new Debian package, version 2.0.
 size 280796 bytes: control archive=2996 bytes.
    1292 bytes,    31 lines      control              
    4534 bytes,    71 lines      md5sums              
      88 bytes,     2 lines      shlibs               
      65 bytes,     2 lines      triggers             
 Package: gerris
 Version: 20131206+dfsg-19
 Architecture: armhf
 Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
 Installed-Size: 1011
 Depends: gcc, libc6 (>= 2.29), libgfortran5 (>= 8), libgfs-1.3-2 (>= 20131206+dfsg), libglib2.0-0 (>= 2.12.0), libgts-0.7-5 (>= 0.7.6), libopenmpi3 (>= 4.0.2)
 Recommends: gfsview
 Suggests: python3
 Breaks: gerris-mpi (<< 20131206+dfsg-7)
 Replaces: gerris-mpi (<< 20131206+dfsg-7)
 Section: science
 Priority: optional
 Homepage: http://gfs.sourceforge.net/
 Description: Fluid Flow Solver
  Gerris is a system for the solution of the partial differential
  equations describing fluid flow.
  .
  A brief summary of its main (current) features:
  .
    * Solves the time-dependent incompressible variable-density Euler,
      Stokes or Navier-Stokes equations
    * Adaptive mesh refinement: the resolution is adapted dynamically to
      the features of the flow
    * Entirely automatic mesh generation in complex geometries
    * Second-order in space and time
    * Unlimited number of advected/diffused passive tracers
    * Flexible specification of additional source terms
    * Portable parallel support using the MPI library
    * Volume of Fluid advection scheme for interfacial flows
  .
  This package has MPI support built in.

drwxr-xr-x root/root         0 2020-02-10 09:37 ./
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/bin/
-rwxr-xr-x root/root      3218 2020-02-10 09:37 ./usr/bin/bat2gts
-rwxr-xr-x root/root     18248 2020-02-10 09:37 ./usr/bin/gerris2D
-rwxr-xr-x root/root     18248 2020-02-10 09:37 ./usr/bin/gerris3D
-rwxr-xr-x root/root      1967 2020-02-10 09:37 ./usr/bin/gfs-highlight
-rwxr-xr-x root/root       551 2020-02-10 09:37 ./usr/bin/gfs2gfs
-rwxr-xr-x root/root     30744 2020-02-10 09:37 ./usr/bin/gfs2oogl2D
-rwxr-xr-x root/root     30744 2020-02-10 09:37 ./usr/bin/gfs2oogl3D
-rwxr-xr-x root/root      9864 2020-02-10 09:37 ./usr/bin/gfscombine2D
-rwxr-xr-x root/root      9864 2020-02-10 09:37 ./usr/bin/gfscombine3D
-rwxr-xr-x root/root     18344 2020-02-10 09:37 ./usr/bin/gfscompare2D
-rwxr-xr-x root/root     18312 2020-02-10 09:37 ./usr/bin/gfscompare3D
-rwxr-xr-x root/root      5034 2020-02-10 09:37 ./usr/bin/gfsjoin
-rwxr-xr-x root/root      9880 2020-02-10 09:37 ./usr/bin/gfsjoin2D
-rwxr-xr-x root/root      9880 2020-02-10 09:37 ./usr/bin/gfsjoin3D
-rwxr-xr-x root/root      1264 2020-02-10 09:37 ./usr/bin/gfsplot
-rwxr-xr-x root/root      1732 2020-02-10 09:37 ./usr/bin/gfsxref
-rwxr-xr-x root/root     22168 2020-02-10 09:37 ./usr/bin/kdt2kdt
-rwxr-xr-x root/root     18008 2020-02-10 09:37 ./usr/bin/kdtquery
-rwxr-xr-x root/root       506 2020-02-10 09:37 ./usr/bin/ppm2mpeg
-rwxr-xr-x root/root       505 2020-02-10 09:37 ./usr/bin/ppm2theora
-rwxr-xr-x root/root       468 2020-02-10 09:37 ./usr/bin/ppm2video
-rwxr-xr-x root/root      5768 2020-02-10 09:37 ./usr/bin/ppmcombine
-rwxr-xr-x root/root     63128 2020-02-10 09:37 ./usr/bin/rsurface2kdt
-rwxr-xr-x root/root     18136 2020-02-10 09:37 ./usr/bin/shapes
-rwxr-xr-x root/root      9864 2020-02-10 09:37 ./usr/bin/streamanime
-rwxr-xr-x root/root     22168 2020-02-10 09:37 ./usr/bin/xyz2kdt
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2 -> libstokes2D-1.3.so.2.0.0
-rw-r--r-- root/root     30148 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0
-rw-r--r-- root/root     27108 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.a
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.so -> libstokes2D-1.3.so.2.0.0
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2 -> libstokes3D-1.3.so.2.0.0
-rw-r--r-- root/root     30148 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0
-rw-r--r-- root/root     27108 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.a
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.so -> libstokes3D-1.3.so.2.0.0
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/gerris/
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/gerris/gfs2tex.py -> ../../share/gerris/gfs2tex.py
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/gerris/m4.awk -> ../../share/gerris/m4.awk
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/doc/gerris/
-rw-r--r-- root/root       930 2013-12-06 15:51 ./usr/share/doc/gerris/AUTHORS
-rw-r--r-- root/root      4362 2013-12-06 15:51 ./usr/share/doc/gerris/NEWS.gz
-rw-r--r-- root/root       665 2013-12-06 15:51 ./usr/share/doc/gerris/README
-rw-r--r-- root/root       277 2013-12-06 15:51 ./usr/share/doc/gerris/THANKS
-rw-r--r-- root/root      1405 2013-12-06 15:51 ./usr/share/doc/gerris/TODO
-rw-r--r-- root/root      4782 2020-02-10 09:37 ./usr/share/doc/gerris/changelog.Debian.gz
-rw-r--r-- root/root     66168 2013-12-06 15:56 ./usr/share/doc/gerris/changelog.gz
-rw-r--r-- root/root      1933 2020-02-10 09:37 ./usr/share/doc/gerris/copyright
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/gerris/
-rwxr-xr-x root/root       851 2020-02-10 09:37 ./usr/share/gerris/build_function
-rw-r--r-- root/root      5521 2020-02-10 09:37 ./usr/share/gerris/gerris.dic
-rw-r--r-- root/root      6565 2020-02-10 09:37 ./usr/share/gerris/gfs-keywords.el
-rw-r--r-- root/root      4732 2020-02-10 09:37 ./usr/share/gerris/gfs-mode.el
-rw-r--r-- root/root       545 2020-02-10 09:37 ./usr/share/gerris/gfs.hva
-rw-r--r-- root/root     10891 2020-02-10 09:37 ./usr/share/gerris/gfs.lang
-rw-r--r-- root/root     10685 2020-02-10 09:37 ./usr/share/gerris/gfs.php
-rw-r--r-- root/root       210 2020-02-10 09:37 ./usr/share/gerris/gfs.sty
-rw-r--r-- root/root      7152 2020-02-10 09:37 ./usr/share/gerris/gfs2tex.py
-rw-r--r-- root/root       387 2020-02-10 09:37 ./usr/share/gerris/kaltura.sh
-rwxr-xr-x root/root    351714 2020-02-10 09:37 ./usr/share/gerris/libtool
-rw-r--r-- root/root       934 2020-02-10 09:37 ./usr/share/gerris/m4.awk
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/icons/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/icons/hicolor/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/icons/hicolor/48x48/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/icons/hicolor/48x48/mimetypes/
-rw-r--r-- root/root      3542 2020-02-10 09:37 ./usr/share/icons/hicolor/48x48/mimetypes/application-gerris-2D.png
-rw-r--r-- root/root      3538 2020-02-10 09:37 ./usr/share/icons/hicolor/48x48/mimetypes/application-gerris-3D.png
-rw-r--r-- root/root      3627 2020-02-10 09:37 ./usr/share/icons/hicolor/48x48/mimetypes/application-gerris-compressed.png
-rw-r--r-- root/root      3466 2020-02-10 09:37 ./usr/share/icons/hicolor/48x48/mimetypes/application-gerris.png
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/man/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/man/man1/
-rw-r--r-- root/root       665 2020-02-10 09:37 ./usr/share/man/man1/bat2gts.1.gz
-rw-r--r-- root/root       747 2020-02-10 09:37 ./usr/share/man/man1/gerris2D.1.gz
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/share/man/man1/gerris3D.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root       447 2020-02-10 09:37 ./usr/share/man/man1/gfs-config.1.gz
-rw-r--r-- root/root       499 2020-02-10 09:37 ./usr/share/man/man1/gfs-highlight.1.gz
-rw-r--r-- root/root       446 2020-02-10 09:37 ./usr/share/man/man1/gfs2gfs.1.gz
-rw-r--r-- root/root      1174 2020-02-10 09:37 ./usr/share/man/man1/gfs2oogl2D.1.gz
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/share/man/man1/gfs2oogl3D.1.gz -> gfs2oogl2D.1.gz
-rw-r--r-- root/root      1008 2020-02-10 09:37 ./usr/share/man/man1/gfscompare2D.1.gz
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/share/man/man1/gfscompare3D.1.gz -> gfscompare2D.1.gz
-rw-r--r-- root/root       383 2020-02-10 09:37 ./usr/share/man/man1/gfsjoin.1.gz
-rw-r--r-- root/root       433 2020-02-10 09:37 ./usr/share/man/man1/gfsjoin2D.1.gz
-rw-r--r-- root/root       433 2020-02-10 09:37 ./usr/share/man/man1/gfsjoin3D.1.gz
-rw-r--r-- root/root       466 2020-02-10 09:37 ./usr/share/man/man1/gfsxref.1.gz
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/share/man/man1/ppm2mpeg.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root       488 2020-02-10 09:37 ./usr/share/man/man1/ppmcombine.1.gz
-rw-r--r-- root/root       398 2020-02-10 09:37 ./usr/share/man/man1/rsurfaceinfo.1.gz
-rw-r--r-- root/root       332 2020-02-10 09:37 ./usr/share/man/man1/rsurfacequery.1.gz
-rw-r--r-- root/root       660 2020-02-10 09:37 ./usr/share/man/man1/shapes.1.gz
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/share/man/man1/streamanime.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root       554 2020-02-10 09:37 ./usr/share/man/man1/xyz2rsurface.1.gz
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/mime/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/mime/packages/
-rw-r--r-- root/root      1048 2020-02-10 09:37 ./usr/share/mime/packages/gerris.xml


libgfs-1.3-2-dbgsym_20131206+dfsg-19_armhf.deb
----------------------------------------------

 new Debian package, version 2.0.
 size 1866800 bytes: control archive=656 bytes.
     451 bytes,    12 lines      control              
     304 bytes,     3 lines      md5sums              
 Package: libgfs-1.3-2-dbgsym
 Source: gerris
 Version: 20131206+dfsg-19
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
 Installed-Size: 2116
 Depends: libgfs-1.3-2 (= 20131206+dfsg-19)
 Section: debug
 Priority: optional
 Description: debug symbols for libgfs-1.3-2
 Build-Ids: 7f0f9d1435c4e56aa8deb08d222dadeeb2a2520b 8bbe2c97e50ffb95075acf831cb177a071f40281

drwxr-xr-x root/root         0 2020-02-10 09:37 ./
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/7f/
-rw-r--r-- root/root   1066980 2020-02-10 09:37 ./usr/lib/debug/.build-id/7f/0f9d1435c4e56aa8deb08d222dadeeb2a2520b.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.build-id/8b/
-rw-r--r-- root/root   1045464 2020-02-10 09:37 ./usr/lib/debug/.build-id/8b/be2c97e50ffb95075acf831cb177a071f40281.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root     40124 2020-02-10 09:37 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/libgfs-1.3-2.debug
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/share/doc/libgfs-1.3-2-dbgsym -> libgfs-1.3-2


libgfs-1.3-2_20131206+dfsg-19_armhf.deb
---------------------------------------

 new Debian package, version 2.0.
 size 476460 bytes: control archive=1008 bytes.
     726 bytes,    19 lines      control              
     469 bytes,     6 lines      md5sums              
      94 bytes,     2 lines      shlibs               
      65 bytes,     2 lines      triggers             
 Package: libgfs-1.3-2
 Source: gerris
 Version: 20131206+dfsg-19
 Architecture: armhf
 Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
 Installed-Size: 1619
 Depends: libc6 (>= 2.29), libglib2.0-0 (>= 2.30.0), libgts-0.7-5 (>= 0.7.6+darcs121130), libopenmpi3 (>= 4.0.2)
 Breaks: libgfs-mpi-1.3-2 (<< 20131206+dfsg-7)
 Replaces: libgfs-mpi-1.3-2 (<< 20131206+dfsg-7)
 Section: devel
 Priority: optional
 Homepage: http://gfs.sourceforge.net/
 Description: Fluid Flow Solver -- shared libraries
  Gerris is a system for the solution of the partial differential
  equations describing fluid flow.
  .
  This package contains the shared libraries for libgfs.
  .
  This package has MPI support built in.

drwxr-xr-x root/root         0 2020-02-10 09:37 ./
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2 -> libgfs2D-1.3.so.2.0.0
-rw-r--r-- root/root    762216 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2 -> libgfs3D-1.3.so.2.0.0
-rw-r--r-- root/root    805104 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2.0.0
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/doc/libgfs-1.3-2/
-rw-r--r-- root/root      4782 2020-02-10 09:37 ./usr/share/doc/libgfs-1.3-2/changelog.Debian.gz
-rw-r--r-- root/root     66168 2013-12-06 15:56 ./usr/share/doc/libgfs-1.3-2/changelog.gz
-rw-r--r-- root/root      1933 2020-02-10 09:37 ./usr/share/doc/libgfs-1.3-2/copyright
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/lintian/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/lintian/overrides/
-rw-r--r-- root/root        48 2020-02-10 09:37 ./usr/share/lintian/overrides/libgfs-1.3-2


libgfs-dev_20131206+dfsg-19_armhf.deb
-------------------------------------

 new Debian package, version 2.0.
 size 103716 bytes: control archive=1856 bytes.
     739 bytes,    20 lines      control              
    2759 bytes,    43 lines      md5sums              
 Package: libgfs-dev
 Source: gerris
 Version: 20131206+dfsg-19
 Architecture: armhf
 Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
 Installed-Size: 318
 Depends: ffmpeg, libgfs-1.3-2 (= 20131206+dfsg-19), libgts-dev
 Breaks: libgfs-mpi-dev (<< 20131206+dfsg-7)
 Replaces: libgfs-mpi-dev (<< 20131206+dfsg-7)
 Section: libdevel
 Priority: optional
 Homepage: http://gfs.sourceforge.net/
 Description: Fluid Flow Solver -- development libraries and headers
  Gerris is a system for the solution of the partial differential
  equations describing fluid flow.
  .
  This package contains the headers and development libraries needed to
  build applications using libgfs.
  .
  This package has MPI support built in.

drwxr-xr-x root/root         0 2020-02-10 09:37 ./
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/include/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/include/gerris/
-rw-r--r-- root/root      4867 2020-02-10 09:37 ./usr/include/gerris/adaptive.h
-rw-r--r-- root/root      3762 2020-02-10 09:37 ./usr/include/gerris/advection.h
-rw-r--r-- root/root      1490 2020-02-10 09:37 ./usr/include/gerris/balance.h
-rw-r--r-- root/root     10432 2020-02-10 09:37 ./usr/include/gerris/boundary.h
-rw-r--r-- root/root      2105 2020-02-10 09:37 ./usr/include/gerris/cartesian.h
-rw-r--r-- root/root     18544 2020-02-10 09:37 ./usr/include/gerris/domain.h
-rw-r--r-- root/root     10394 2020-02-10 09:37 ./usr/include/gerris/event.h
-rw-r--r-- root/root     11820 2020-02-10 09:37 ./usr/include/gerris/fluid.h
-rw-r--r-- root/root     23268 2020-02-10 09:37 ./usr/include/gerris/ftt.h
-rw-r--r-- root/root      7232 2020-02-10 09:37 ./usr/include/gerris/function.h
-rw-r--r-- root/root      4699 2020-02-10 09:37 ./usr/include/gerris/graphic.h
-rw-r--r-- root/root      1649 2020-02-10 09:37 ./usr/include/gerris/init.h
-rw-r--r-- root/root      4138 2020-02-10 09:37 ./usr/include/gerris/isocube.h
-rw-r--r-- root/root      1638 2020-02-10 09:37 ./usr/include/gerris/levelset.h
-rw-r--r-- root/root      3198 2020-02-10 09:37 ./usr/include/gerris/map.h
-rw-r--r-- root/root      5078 2020-02-10 09:37 ./usr/include/gerris/metric.h
-rw-r--r-- root/root      2675 2020-02-10 09:37 ./usr/include/gerris/moving.h
-rw-r--r-- root/root      1892 2020-02-10 09:37 ./usr/include/gerris/mpi_boundary.h
-rw-r--r-- root/root      3387 2020-02-10 09:37 ./usr/include/gerris/ocean.h
-rw-r--r-- root/root     10027 2020-02-10 09:37 ./usr/include/gerris/output.h
-rw-r--r-- root/root      1443 2020-02-10 09:37 ./usr/include/gerris/particle.h
-rw-r--r-- root/root      5385 2020-02-10 09:37 ./usr/include/gerris/poisson.h
-rw-r--r-- root/root      3333 2020-02-10 09:37 ./usr/include/gerris/refine.h
-rw-r--r-- root/root      3990 2020-02-10 09:37 ./usr/include/gerris/river.h
-rw-r--r-- root/root      5708 2020-02-10 09:37 ./usr/include/gerris/simulation.h
-rw-r--r-- root/root      3148 2020-02-10 09:37 ./usr/include/gerris/solid.h
-rw-r--r-- root/root     10086 2020-02-10 09:37 ./usr/include/gerris/source.h
-rw-r--r-- root/root      1870 2020-02-10 09:37 ./usr/include/gerris/spatial.h
-rw-r--r-- root/root      4599 2020-02-10 09:37 ./usr/include/gerris/surface.h
-rw-r--r-- root/root      4072 2020-02-10 09:37 ./usr/include/gerris/tension.h
-rw-r--r-- root/root      5180 2020-02-10 09:37 ./usr/include/gerris/timestep.h
-rw-r--r-- root/root      1589 2020-02-10 09:37 ./usr/include/gerris/unstructured.h
-rw-r--r-- root/root     10845 2020-02-10 09:37 ./usr/include/gerris/utils.h
-rw-r--r-- root/root      9866 2020-02-10 09:37 ./usr/include/gerris/variable.h
-rw-r--r-- root/root       195 2020-02-10 09:37 ./usr/include/gerris/version.h
-rw-r--r-- root/root      6340 2020-02-10 09:37 ./usr/include/gerris/vof.h
-rw-r--r-- root/root      2073 2020-02-10 09:37 ./usr/include/gerris/wave.h
-rw-r--r-- root/root      1525 2020-02-10 09:37 ./usr/include/gfs.h
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so -> libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs2D.so -> libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so -> libgfs3D-1.3.so.2.0.0
lrwxrwxrwx root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/libgfs3D.so -> libgfs3D-1.3.so.2.0.0
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/pkgconfig/
-rw-r--r-- root/root       274 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/pkgconfig/gerris2D.pc
-rw-r--r-- root/root       263 2020-02-10 09:37 ./usr/lib/arm-linux-gnueabihf/pkgconfig/gerris3D.pc
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-02-10 09:37 ./usr/share/doc/libgfs-dev/
-rw-r--r-- root/root      4782 2020-02-10 09:37 ./usr/share/doc/libgfs-dev/changelog.Debian.gz
-rw-r--r-- root/root     66168 2013-12-06 15:56 ./usr/share/doc/libgfs-dev/changelog.gz
-rw-r--r-- root/root      1933 2020-02-10 09:37 ./usr/share/doc/libgfs-dev/copyright


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 104996
Build-Time: 1589
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1007
Job: gerris_20131206+dfsg-19
Machine Architecture: armhf
Package: gerris
Package-Time: 2650
Source-Version: 20131206+dfsg-19
Space: 104996
Status: successful
Version: 20131206+dfsg-19
--------------------------------------------------------------------------------
Finished at 2020-02-16T12:18:48Z
Build needed 00:44:10, 104996k disc space