Raspbian Package Auto-Building

Build log for gerris (20131206+dfsg-18+b10) on armhf

gerris20131206+dfsg-18+b10armhf → 2018-03-23 12:49:58

sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02

+==============================================================================+
| gerris 20131206+dfsg-18+b10 (armhf)          Fri, 23 Mar 2018 12:27:26 +0000 |
+==============================================================================+

Package: gerris
Version: 20131206+dfsg-18+b10
Source Version: 20131206+dfsg-18
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-841538e7-7e95-4a20-b662-2c80c5a6c346' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.7 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.4 MB]
Fetched 23.1 MB in 13s (1766 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'gerris' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-science/packages/gerris.git
Please use:
git clone https://anonscm.debian.org/git/debian-science/packages/gerris.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 2853 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main gerris 20131206+dfsg-18 (dsc) [2395 B]
Get:2 http://172.17.0.1/private buster-staging/main gerris 20131206+dfsg-18 (tar) [2834 kB]
Get:3 http://172.17.0.1/private buster-staging/main gerris 20131206+dfsg-18 (diff) [16.9 kB]
Fetched 2853 kB in 1s (1919 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/gerris-ass2kA/gerris-20131206+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/gerris-ass2kA' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-Oxca9m/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-Oxca9m/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-Oxca9m/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (8889 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
  libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
  systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 13 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (54.7 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15650 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: autotools-dev, debhelper (>= 10), dh-exec, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python
Filtered Build-Depends: autotools-dev, debhelper (>= 10), dh-exec, gfortran, libglib2.0-dev, libgsl0-dev, libgts-bin (>= 0.7.6+darcs121130-1.2), libgts-dev (>= 0.7.6+darcs121130-1.2), libnetcdf-dev, mpi-default-dev, python
dpkg-deb: building package 'sbuild-build-depends-gerris-dummy' in '/<<BUILDDIR>>/resolver-Oxca9m/apt_archive/sbuild-build-depends-gerris-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-gerris-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ Sources [568 B]
Get:5 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ Packages [652 B]
Fetched 2553 B in 0s (10.7 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install gerris build dependencies (apt-based resolver)
------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates dbus dbus-user-session e2fsprogs-l10n libnss-systemd
  libpam-systemd libsasl2-modules openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-exec dh-python dh-strip-nondeterminism file gettext
  gettext-base gfortran gfortran-7 groff-base hdf5-helpers ibverbs-providers
  intltool-debian libaec-dev libaec0 libarchive-zip-perl libbsd0 libcroco3
  libcurl3-gnutls libcurl4-gnutls-dev libelf1 libfile-stripnondeterminism-perl
  libgfortran-7-dev libgfortran4 libglib2.0-0 libglib2.0-bin libglib2.0-data
  libglib2.0-dev libglib2.0-dev-bin libgsl-dev libgsl23 libgslcblas0
  libgssapi-krb5-2 libgts-0.7-5 libgts-bin libgts-dev libhdf5-100
  libhdf5-cpp-100 libhdf5-dev libhwloc-dev libhwloc-plugins libhwloc5
  libibverbs-dev libibverbs1 libicu57 libjpeg-dev libjpeg62-turbo
  libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
  libltdl-dev libltdl7 libmagic-mgc libmagic1 libmpdec2 libnetcdf-dev
  libnetcdf13 libnghttp2-14 libnl-3-200 libnl-route-3-200 libopenmpi-dev
  libopenmpi2 libpciaccess0 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5
  libpipeline1 libpsl5 libpython-stdlib libpython2.7-minimal
  libpython2.7-stdlib libpython3-stdlib libpython3.6-minimal
  libpython3.6-stdlib librtmp1 libsigsegv2 libssh2-1 libsz2 libtimedate-perl
  libtool libxml2 m4 man-db mime-support mpi-default-dev ocl-icd-libopencl1
  openmpi-common pkg-config po-debconf python python-minimal python2.7
  python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal
  python3.6 python3.6-minimal zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev
  gfortran-doc gfortran-7-doc libgfortran4-dbg libcoarrays-dev groff
  libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev
  librtmp-dev libssh2-1-dev libglib2.0-doc gsl-ref-psdoc | gsl-doc-pdf
  | gsl-doc-info | gsl-ref-html krb5-doc krb5-user libgts-doc libhdf5-doc
  libhwloc-contrib-plugins libtool-doc netcdf-bin netcdf-doc openmpi-doc
  pciutils gcj-jdk m4-doc apparmor less www-browser opencl-icd
  libmail-box-perl python-doc python-tk python2.7-doc binfmt-support
  python3-doc python3-tk python3-venv python3.6-venv python3.6-doc
Recommended packages:
  curl | wget | lynx-cur libarchive-cpio-perl shared-mime-info xdg-user-dirs
  krb5-locales openmpi-bin publicsuffix libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-exec dh-python dh-strip-nondeterminism file gettext
  gettext-base gfortran gfortran-7 groff-base hdf5-helpers ibverbs-providers
  intltool-debian libaec-dev libaec0 libarchive-zip-perl libbsd0 libcroco3
  libcurl3-gnutls libcurl4-gnutls-dev libelf1 libfile-stripnondeterminism-perl
  libgfortran-7-dev libgfortran4 libglib2.0-0 libglib2.0-bin libglib2.0-data
  libglib2.0-dev libglib2.0-dev-bin libgsl-dev libgsl23 libgslcblas0
  libgssapi-krb5-2 libgts-0.7-5 libgts-bin libgts-dev libhdf5-100
  libhdf5-cpp-100 libhdf5-dev libhwloc-dev libhwloc-plugins libhwloc5
  libibverbs-dev libibverbs1 libicu57 libjpeg-dev libjpeg62-turbo
  libjpeg62-turbo-dev libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
  libltdl-dev libltdl7 libmagic-mgc libmagic1 libmpdec2 libnetcdf-dev
  libnetcdf13 libnghttp2-14 libnl-3-200 libnl-route-3-200 libopenmpi-dev
  libopenmpi2 libpciaccess0 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5
  libpipeline1 libpsl5 libpython-stdlib libpython2.7-minimal
  libpython2.7-stdlib libpython3-stdlib libpython3.6-minimal
  libpython3.6-stdlib librtmp1 libsigsegv2 libssh2-1 libsz2 libtimedate-perl
  libtool libxml2 m4 man-db mime-support mpi-default-dev ocl-icd-libopencl1
  openmpi-common pkg-config po-debconf python python-minimal python2.7
  python2.7-minimal python3 python3-distutils python3-lib2to3 python3-minimal
  python3.6 python3.6-minimal sbuild-build-depends-gerris-dummy zlib1g-dev
0 upgraded, 110 newly installed, 0 to remove and 13 not upgraded.
Need to get 40.0 MB/55.0 MB of archives.
After this operation, 192 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-Oxca9m/apt_archive ./ sbuild-build-depends-gerris-dummy 0.invalid.0 [936 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.2-1 [1145 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.14-7 [393 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.14-7 [1077 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.14-4 [41.0 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.14-7 [1842 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.14-7 [293 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.14-4 [20.4 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.14-4 [155 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libpython3.6-minimal armhf 3.6.5~rc1-1 [565 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf python3.6-minimal armhf 3.6.5~rc1-1 [1234 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libpython3.6-stdlib armhf 3.6.5~rc1-1 [1585 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.6.5~rc1-1 [79.0 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.6.5~rc1-1 [147 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf python3.6 armhf 3.6.5~rc1-1 [229 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.6.4-1 [19.3 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.6.4-1 [22.3 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-4 [117 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-1 [32.2 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3 [736 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-4 [434 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 16 [16.3 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.60-1 [95.6 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.040-1 [18.4 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.040-1 [11.8 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.56.0-2 [2750 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-4 [1218 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.1.5 [1007 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libgfortran4 armhf 7.3.0-11 [191 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libgfortran-7-dev armhf 7.3.0-11 [232 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf gfortran-7 armhf 7.3.0-11 [5456 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf gfortran armhf 4:7.2.0-1d1 [1352 B]
Get:43 http://172.17.0.1/private buster-staging/main armhf hdf5-helpers armhf 1.10.0-patch1+docs-4 [36.0 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libaec-dev armhf 1.0.2-1 [19.1 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libcurl4-gnutls-dev armhf 7.58.0-2 [346 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libglib2.0-data all 2.56.0-2 [2663 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libglib2.0-bin armhf 2.56.0-2 [1690 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libglib2.0-dev-bin armhf 2.56.0-2 [1729 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libpcre16-3 armhf 2:8.39-9 [234 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libpcre32-3 armhf 2:8.39-9 [226 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libpcrecpp0v5 armhf 2:8.39-9 [150 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libpcre3-dev armhf 2:8.39-9 [561 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libglib2.0-dev armhf 2.56.0-2 [2802 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libgslcblas0 armhf 2.4+dfsg-6 [75.1 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libgsl23 armhf 2.4+dfsg-6 [681 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libgsl-dev armhf 2.4+dfsg-6 [863 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [134 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libgts-bin armhf 0.7.6+darcs121130-4 [47.8 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libgts-dev armhf 0.7.6+darcs121130-4 [147 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libhdf5-cpp-100 armhf 1.10.0-patch1+docs-4 [118 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf libhdf5-dev armhf 1.10.0-patch1+docs-4 [2109 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libltdl-dev armhf 2.4.6-2 [159 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libhwloc-dev armhf 1.11.9-1+rpi1 [140 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libibverbs-dev armhf 17.0-1 [89.8 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libnetcdf-dev armhf 1:4.6.0-2 [80.2 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libopenmpi-dev armhf 2.1.1-8+rpi1 [1024 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf mpi-default-dev armhf 1.10 [5180 B]
Get:68 http://172.17.0.1/private buster-staging/main armhf dh-exec armhf 0.23 [24.9 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 40.0 MB in 17s (2297 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 15650 files and directories currently installed.)
Preparing to unpack .../00-libbsd0_0.8.7-1_armhf.deb ...
Unpacking libbsd0:armhf (0.8.7-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../01-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../02-groff-base_1.22.3-10_armhf.deb ...
Unpacking groff-base (1.22.3-10) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../03-libpipeline1_1.5.0-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.0-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../04-man-db_2.8.2-1_armhf.deb ...
Unpacking man-db (2.8.2-1) ...
Selecting previously unselected package libpython2.7-minimal:armhf.
Preparing to unpack .../05-libpython2.7-minimal_2.7.14-7_armhf.deb ...
Unpacking libpython2.7-minimal:armhf (2.7.14-7) ...
Selecting previously unselected package python2.7-minimal.
Preparing to unpack .../06-python2.7-minimal_2.7.14-7_armhf.deb ...
Unpacking python2.7-minimal (2.7.14-7) ...
Selecting previously unselected package python-minimal.
Preparing to unpack .../07-python-minimal_2.7.14-4_armhf.deb ...
Unpacking python-minimal (2.7.14-4) ...
Selecting previously unselected package mime-support.
Preparing to unpack .../08-mime-support_3.60_all.deb ...
Unpacking mime-support (3.60) ...
Selecting previously unselected package libpython2.7-stdlib:armhf.
Preparing to unpack .../09-libpython2.7-stdlib_2.7.14-7_armhf.deb ...
Unpacking libpython2.7-stdlib:armhf (2.7.14-7) ...
Selecting previously unselected package python2.7.
Preparing to unpack .../10-python2.7_2.7.14-7_armhf.deb ...
Unpacking python2.7 (2.7.14-7) ...
Selecting previously unselected package libpython-stdlib:armhf.
Preparing to unpack .../11-libpython-stdlib_2.7.14-4_armhf.deb ...
Unpacking libpython-stdlib:armhf (2.7.14-4) ...
Setting up libpython2.7-minimal:armhf (2.7.14-7) ...
Setting up python2.7-minimal (2.7.14-7) ...
Setting up python-minimal (2.7.14-4) ...
Selecting previously unselected package python.
(Reading database ... 17033 files and directories currently installed.)
Preparing to unpack .../00-python_2.7.14-4_armhf.deb ...
Unpacking python (2.7.14-4) ...
Selecting previously unselected package libpython3.6-minimal:armhf.
Preparing to unpack .../01-libpython3.6-minimal_3.6.5~rc1-1_armhf.deb ...
Unpacking libpython3.6-minimal:armhf (3.6.5~rc1-1) ...
Selecting previously unselected package python3.6-minimal.
Preparing to unpack .../02-python3.6-minimal_3.6.5~rc1-1_armhf.deb ...
Unpacking python3.6-minimal (3.6.5~rc1-1) ...
Selecting previously unselected package python3-minimal.
Preparing to unpack .../03-python3-minimal_3.6.4-1_armhf.deb ...
Unpacking python3-minimal (3.6.4-1) ...
Selecting previously unselected package libmpdec2:armhf.
Preparing to unpack .../04-libmpdec2_2.4.2-1_armhf.deb ...
Unpacking libmpdec2:armhf (2.4.2-1) ...
Selecting previously unselected package libpython3.6-stdlib:armhf.
Preparing to unpack .../05-libpython3.6-stdlib_3.6.5~rc1-1_armhf.deb ...
Unpacking libpython3.6-stdlib:armhf (3.6.5~rc1-1) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../06-python3-lib2to3_3.6.5~rc1-1_all.deb ...
Unpacking python3-lib2to3 (3.6.5~rc1-1) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../07-python3-distutils_3.6.5~rc1-1_all.deb ...
Unpacking python3-distutils (3.6.5~rc1-1) ...
Selecting previously unselected package python3.6.
Preparing to unpack .../08-python3.6_3.6.5~rc1-1_armhf.deb ...
Unpacking python3.6 (3.6.5~rc1-1) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../09-libpython3-stdlib_3.6.4-1_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.6.4-1) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../10-dh-python_2.20170125_all.deb ...
Unpacking dh-python (2.20170125) ...
Setting up libpython3.6-minimal:armhf (3.6.5~rc1-1) ...
Setting up python3.6-minimal (3.6.5~rc1-1) ...
Setting up python3-minimal (3.6.4-1) ...
Selecting previously unselected package python3.
(Reading database ... 18049 files and directories currently installed.)
Preparing to unpack .../00-python3_3.6.4-1_armhf.deb ...
Unpacking python3 (3.6.4-1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../01-libmagic-mgc_1%3a5.32-2_armhf.deb ...
Unpacking libmagic-mgc (1:5.32-2) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../02-libmagic1_1%3a5.32-2_armhf.deb ...
Unpacking libmagic1:armhf (1:5.32-2) ...
Selecting previously unselected package file.
Preparing to unpack .../03-file_1%3a5.32-2_armhf.deb ...
Unpacking file (1:5.32-2) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../04-gettext-base_0.19.8.1-4_armhf.deb ...
Unpacking gettext-base (0.19.8.1-4) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../05-libkeyutils1_1.5.9-9.2_armhf.deb ...
Unpacking libkeyutils1:armhf (1.5.9-9.2) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../06-libsigsegv2_2.12-1_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-1) ...
Selecting previously unselected package m4.
Preparing to unpack .../07-m4_1.4.18-1_armhf.deb ...
Unpacking m4 (1.4.18-1) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../08-autoconf_2.69-11_all.deb ...
Unpacking autoconf (2.69-11) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../09-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../10-automake_1%3a1.15.1-3_all.deb ...
Unpacking automake (1:1.15.1-3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../11-autopoint_0.19.8.1-4_all.deb ...
Unpacking autopoint (0.19.8.1-4) ...
Selecting previously unselected package libtool.
Preparing to unpack .../12-libtool_2.4.6-2_all.deb ...
Unpacking libtool (2.4.6-2) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../13-dh-autoreconf_16_all.deb ...
Unpacking dh-autoreconf (16) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../14-libarchive-zip-perl_1.60-1_all.deb ...
Unpacking libarchive-zip-perl (1.60-1) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../15-libfile-stripnondeterminism-perl_0.040-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (0.040-1) ...
Selecting previously unselected package libtimedate-perl.
Preparing to unpack .../16-libtimedate-perl_2.3000-2_all.deb ...
Unpacking libtimedate-perl (2.3000-2) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../17-dh-strip-nondeterminism_0.040-1_all.deb ...
Unpacking dh-strip-nondeterminism (0.040-1) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../18-libglib2.0-0_2.56.0-2_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.56.0-2) ...
Selecting previously unselected package libicu57:armhf.
Preparing to unpack .../19-libicu57_57.1-9_armhf.deb ...
Unpacking libicu57:armhf (57.1-9) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../20-libxml2_2.9.4+dfsg1-6.1_armhf.deb ...
Unpacking libxml2:armhf (2.9.4+dfsg1-6.1) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../21-libcroco3_0.6.12-2_armhf.deb ...
Unpacking libcroco3:armhf (0.6.12-2) ...
Selecting previously unselected package gettext.
Preparing to unpack .../22-gettext_0.19.8.1-4_armhf.deb ...
Unpacking gettext (0.19.8.1-4) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../23-intltool-debian_0.35.0+20060710.4_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.4) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../24-po-debconf_1.0.20_all.deb ...
Unpacking po-debconf (1.0.20) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../25-debhelper_11.1.5_all.deb ...
Unpacking debhelper (11.1.5) ...
Selecting previously unselected package libgfortran4:armhf.
Preparing to unpack .../26-libgfortran4_7.3.0-11_armhf.deb ...
Unpacking libgfortran4:armhf (7.3.0-11) ...
Selecting previously unselected package libgfortran-7-dev:armhf.
Preparing to unpack .../27-libgfortran-7-dev_7.3.0-11_armhf.deb ...
Unpacking libgfortran-7-dev:armhf (7.3.0-11) ...
Selecting previously unselected package gfortran-7.
Preparing to unpack .../28-gfortran-7_7.3.0-11_armhf.deb ...
Unpacking gfortran-7 (7.3.0-11) ...
Selecting previously unselected package gfortran.
Preparing to unpack .../29-gfortran_4%3a7.2.0-1d1_armhf.deb ...
Unpacking gfortran (4:7.2.0-1d1) ...
Selecting previously unselected package hdf5-helpers.
Preparing to unpack .../30-hdf5-helpers_1.10.0-patch1+docs-4_armhf.deb ...
Unpacking hdf5-helpers (1.10.0-patch1+docs-4) ...
Selecting previously unselected package libnl-3-200:armhf.
Preparing to unpack .../31-libnl-3-200_3.2.27-2_armhf.deb ...
Unpacking libnl-3-200:armhf (3.2.27-2) ...
Selecting previously unselected package libnl-route-3-200:armhf.
Preparing to unpack .../32-libnl-route-3-200_3.2.27-2_armhf.deb ...
Unpacking libnl-route-3-200:armhf (3.2.27-2) ...
Selecting previously unselected package libibverbs1:armhf.
Preparing to unpack .../33-libibverbs1_17.0-1_armhf.deb ...
Unpacking libibverbs1:armhf (17.0-1) ...
Selecting previously unselected package ibverbs-providers:armhf.
Preparing to unpack .../34-ibverbs-providers_17.0-1_armhf.deb ...
Unpacking ibverbs-providers:armhf (17.0-1) ...
Selecting previously unselected package libaec0:armhf.
Preparing to unpack .../35-libaec0_1.0.2-1_armhf.deb ...
Unpacking libaec0:armhf (1.0.2-1) ...
Selecting previously unselected package libsz2:armhf.
Preparing to unpack .../36-libsz2_1.0.2-1_armhf.deb ...
Unpacking libsz2:armhf (1.0.2-1) ...
Selecting previously unselected package libaec-dev:armhf.
Preparing to unpack .../37-libaec-dev_1.0.2-1_armhf.deb ...
Unpacking libaec-dev:armhf (1.0.2-1) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../38-libkrb5support0_1.16-2_armhf.deb ...
Unpacking libkrb5support0:armhf (1.16-2) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../39-libk5crypto3_1.16-2_armhf.deb ...
Unpacking libk5crypto3:armhf (1.16-2) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../40-libkrb5-3_1.16-2_armhf.deb ...
Unpacking libkrb5-3:armhf (1.16-2) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../41-libgssapi-krb5-2_1.16-2_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.16-2) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../42-libnghttp2-14_1.31.0-1_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.31.0-1) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../43-libpsl5_0.19.1-5_armhf.deb ...
Unpacking libpsl5:armhf (0.19.1-5) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../44-librtmp1_2.4+20151223.gitfa8646d.1-1_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-1) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../45-libssh2-1_1.8.0-1_armhf.deb ...
Unpacking libssh2-1:armhf (1.8.0-1) ...
Selecting previously unselected package libcurl3-gnutls:armhf.
Preparing to unpack .../46-libcurl3-gnutls_7.58.0-2_armhf.deb ...
Unpacking libcurl3-gnutls:armhf (7.58.0-2) ...
Selecting previously unselected package libcurl4-gnutls-dev:armhf.
Preparing to unpack .../47-libcurl4-gnutls-dev_7.58.0-2_armhf.deb ...
Unpacking libcurl4-gnutls-dev:armhf (7.58.0-2) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../48-libelf1_0.170-0.3_armhf.deb ...
Unpacking libelf1:armhf (0.170-0.3) ...
Selecting previously unselected package libglib2.0-data.
Preparing to unpack .../49-libglib2.0-data_2.56.0-2_all.deb ...
Unpacking libglib2.0-data (2.56.0-2) ...
Selecting previously unselected package libglib2.0-bin.
Preparing to unpack .../50-libglib2.0-bin_2.56.0-2_armhf.deb ...
Unpacking libglib2.0-bin (2.56.0-2) ...
Selecting previously unselected package libglib2.0-dev-bin.
Preparing to unpack .../51-libglib2.0-dev-bin_2.56.0-2_armhf.deb ...
Unpacking libglib2.0-dev-bin (2.56.0-2) ...
Selecting previously unselected package libpcre16-3:armhf.
Preparing to unpack .../52-libpcre16-3_2%3a8.39-9_armhf.deb ...
Unpacking libpcre16-3:armhf (2:8.39-9) ...
Selecting previously unselected package libpcre32-3:armhf.
Preparing to unpack .../53-libpcre32-3_2%3a8.39-9_armhf.deb ...
Unpacking libpcre32-3:armhf (2:8.39-9) ...
Selecting previously unselected package libpcrecpp0v5:armhf.
Preparing to unpack .../54-libpcrecpp0v5_2%3a8.39-9_armhf.deb ...
Unpacking libpcrecpp0v5:armhf (2:8.39-9) ...
Selecting previously unselected package libpcre3-dev:armhf.
Preparing to unpack .../55-libpcre3-dev_2%3a8.39-9_armhf.deb ...
Unpacking libpcre3-dev:armhf (2:8.39-9) ...
Selecting previously unselected package pkg-config.
Preparing to unpack .../56-pkg-config_0.29-4_armhf.deb ...
Unpacking pkg-config (0.29-4) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../57-zlib1g-dev_1%3a1.2.8.dfsg-5_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.8.dfsg-5) ...
Selecting previously unselected package libglib2.0-dev:armhf.
Preparing to unpack .../58-libglib2.0-dev_2.56.0-2_armhf.deb ...
Unpacking libglib2.0-dev:armhf (2.56.0-2) ...
Selecting previously unselected package libgslcblas0:armhf.
Preparing to unpack .../59-libgslcblas0_2.4+dfsg-6_armhf.deb ...
Unpacking libgslcblas0:armhf (2.4+dfsg-6) ...
Selecting previously unselected package libgsl23:armhf.
Preparing to unpack .../60-libgsl23_2.4+dfsg-6_armhf.deb ...
Unpacking libgsl23:armhf (2.4+dfsg-6) ...
Selecting previously unselected package libgsl-dev.
Preparing to unpack .../61-libgsl-dev_2.4+dfsg-6_armhf.deb ...
Unpacking libgsl-dev (2.4+dfsg-6) ...
Selecting previously unselected package libgts-0.7-5:armhf.
Preparing to unpack .../62-libgts-0.7-5_0.7.6+darcs121130-4_armhf.deb ...
Unpacking libgts-0.7-5:armhf (0.7.6+darcs121130-4) ...
Selecting previously unselected package libgts-bin.
Preparing to unpack .../63-libgts-bin_0.7.6+darcs121130-4_armhf.deb ...
Unpacking libgts-bin (0.7.6+darcs121130-4) ...
Selecting previously unselected package libgts-dev:armhf.
Preparing to unpack .../64-libgts-dev_0.7.6+darcs121130-4_armhf.deb ...
Unpacking libgts-dev:armhf (0.7.6+darcs121130-4) ...
Selecting previously unselected package libhdf5-100:armhf.
Preparing to unpack .../65-libhdf5-100_1.10.0-patch1+docs-4_armhf.deb ...
Unpacking libhdf5-100:armhf (1.10.0-patch1+docs-4) ...
Selecting previously unselected package libhdf5-cpp-100:armhf.
Preparing to unpack .../66-libhdf5-cpp-100_1.10.0-patch1+docs-4_armhf.deb ...
Unpacking libhdf5-cpp-100:armhf (1.10.0-patch1+docs-4) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../67-libjpeg62-turbo_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package libjpeg62-turbo-dev:armhf.
Preparing to unpack .../68-libjpeg62-turbo-dev_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package libjpeg-dev.
Preparing to unpack .../69-libjpeg-dev_1%3a1.5.2-2_all.deb ...
Unpacking libjpeg-dev (1:1.5.2-2) ...
Selecting previously unselected package libhdf5-dev.
Preparing to unpack .../70-libhdf5-dev_1.10.0-patch1+docs-4_armhf.deb ...
Unpacking libhdf5-dev (1.10.0-patch1+docs-4) ...
Selecting previously unselected package libltdl7:armhf.
Preparing to unpack .../71-libltdl7_2.4.6-2_armhf.deb ...
Unpacking libltdl7:armhf (2.4.6-2) ...
Selecting previously unselected package libhwloc5:armhf.
Preparing to unpack .../72-libhwloc5_1.11.9-1+rpi1_armhf.deb ...
Unpacking libhwloc5:armhf (1.11.9-1+rpi1) ...
Selecting previously unselected package libltdl-dev:armhf.
Preparing to unpack .../73-libltdl-dev_2.4.6-2_armhf.deb ...
Unpacking libltdl-dev:armhf (2.4.6-2) ...
Selecting previously unselected package libhwloc-dev:armhf.
Preparing to unpack .../74-libhwloc-dev_1.11.9-1+rpi1_armhf.deb ...
Unpacking libhwloc-dev:armhf (1.11.9-1+rpi1) ...
Selecting previously unselected package libpciaccess0:armhf.
Preparing to unpack .../75-libpciaccess0_0.13.4-1_armhf.deb ...
Unpacking libpciaccess0:armhf (0.13.4-1) ...
Selecting previously unselected package ocl-icd-libopencl1:armhf.
Preparing to unpack .../76-ocl-icd-libopencl1_2.2.12-1_armhf.deb ...
Unpacking ocl-icd-libopencl1:armhf (2.2.12-1) ...
Selecting previously unselected package libhwloc-plugins.
Preparing to unpack .../77-libhwloc-plugins_1.11.9-1+rpi1_armhf.deb ...
Unpacking libhwloc-plugins (1.11.9-1+rpi1) ...
Selecting previously unselected package libibverbs-dev:armhf.
Preparing to unpack .../78-libibverbs-dev_17.0-1_armhf.deb ...
Unpacking libibverbs-dev:armhf (17.0-1) ...
Selecting previously unselected package libnetcdf13:armhf.
Preparing to unpack .../79-libnetcdf13_1%3a4.6.0-2_armhf.deb ...
Unpacking libnetcdf13:armhf (1:4.6.0-2) ...
Selecting previously unselected package libnetcdf-dev.
Preparing to unpack .../80-libnetcdf-dev_1%3a4.6.0-2_armhf.deb ...
Unpacking libnetcdf-dev (1:4.6.0-2) ...
Selecting previously unselected package libopenmpi2:armhf.
Preparing to unpack .../81-libopenmpi2_2.1.1-8+rpi1_armhf.deb ...
Unpacking libopenmpi2:armhf (2.1.1-8+rpi1) ...
Selecting previously unselected package openmpi-common.
Preparing to unpack .../82-openmpi-common_2.1.1-8+rpi1_all.deb ...
Unpacking openmpi-common (2.1.1-8+rpi1) ...
Selecting previously unselected package libopenmpi-dev.
Preparing to unpack .../83-libopenmpi-dev_2.1.1-8+rpi1_armhf.deb ...
Unpacking libopenmpi-dev (2.1.1-8+rpi1) ...
Selecting previously unselected package mpi-default-dev.
Preparing to unpack .../84-mpi-default-dev_1.10_armhf.deb ...
Unpacking mpi-default-dev (1.10) ...
Selecting previously unselected package dh-exec.
Preparing to unpack .../85-dh-exec_0.23_armhf.deb ...
Unpacking dh-exec (0.23) ...
Selecting previously unselected package sbuild-build-depends-gerris-dummy.
Preparing to unpack .../86-sbuild-build-depends-gerris-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-gerris-dummy (0.invalid.0) ...
Setting up libaec0:armhf (1.0.2-1) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libarchive-zip-perl (1.60-1) ...
Setting up libnghttp2-14:armhf (1.31.0-1) ...
Setting up mime-support (3.60) ...
Setting up libgfortran4:armhf (7.3.0-11) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsigsegv2:armhf (2.12-1) ...
Setting up libpsl5:armhf (0.19.1-5) ...
Setting up libelf1:armhf (0.170-0.3) ...
Setting up groff-base (1.22.3-10) ...
Setting up libglib2.0-0:armhf (2.56.0-2) ...
No schema files found: removed existing output file.
Setting up gettext-base (0.19.8.1-4) ...
Setting up libpipeline1:armhf (1.5.0-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-1) ...
Setting up m4 (1.4.18-1) ...
Setting up libicu57:armhf (57.1-9) ...
Setting up libbsd0:armhf (0.8.7-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-6.1) ...
Setting up libmagic-mgc (1:5.32-2) ...
Setting up libmagic1:armhf (1:5.32-2) ...
Setting up libcroco3:armhf (0.6.12-2) ...
Setting up pkg-config (0.29-4) ...
Setting up libssh2-1:armhf (1.8.0-1) ...
Setting up libglib2.0-data (2.56.0-2) ...
Setting up openmpi-common (2.1.1-8+rpi1) ...
Processing triggers for libc-bin (2.27-2+rpi1) ...
Setting up autotools-dev (20180224.1) ...
Setting up libltdl7:armhf (2.4.6-2) ...
Setting up libgfortran-7-dev:armhf (7.3.0-11) ...
Setting up libpciaccess0:armhf (0.13.4-1) ...
Setting up gfortran-7 (7.3.0-11) ...
Setting up libpcrecpp0v5:armhf (2:8.39-9) ...
Setting up libpcre32-3:armhf (2:8.39-9) ...
Setting up libpcre16-3:armhf (2:8.39-9) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.5.2-2+b1) ...
Setting up ocl-icd-libopencl1:armhf (2.2.12-1) ...
Setting up libkeyutils1:armhf (1.5.9-9.2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libnl-3-200:armhf (3.2.27-2) ...
Setting up libgslcblas0:armhf (2.4+dfsg-6) ...
Setting up libglib2.0-bin (2.56.0-2) ...
Setting up hdf5-helpers (1.10.0-patch1+docs-4) ...
Setting up libpython2.7-stdlib:armhf (2.7.14-7) ...
Setting up autopoint (0.19.8.1-4) ...
Setting up libmpdec2:armhf (2.4.2-1) ...
Setting up libsz2:armhf (1.0.2-1) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-5) ...
Setting up libfile-stripnondeterminism-perl (0.040-1) ...
Setting up gfortran (4:7.2.0-1d1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libpython3.6-stdlib:armhf (3.6.5~rc1-1) ...
Setting up libgts-0.7-5:armhf (0.7.6+darcs121130-4) ...
Setting up libpcre3-dev:armhf (2:8.39-9) ...
Setting up libhdf5-100:armhf (1.10.0-patch1+docs-4) ...
Setting up libltdl-dev:armhf (2.4.6-2) ...
Setting up libgsl23:armhf (2.4+dfsg-6) ...
Setting up gettext (0.19.8.1-4) ...
Setting up libgsl-dev (2.4+dfsg-6) ...
Setting up libaec-dev:armhf (1.0.2-1) ...
Setting up python2.7 (2.7.14-7) ...
Setting up libnl-route-3-200:armhf (3.2.27-2) ...
Setting up autoconf (2.69-11) ...
Setting up file (1:5.32-2) ...
Setting up libhwloc5:armhf (1.11.9-1+rpi1) ...
Setting up libkrb5support0:armhf (1.16-2) ...
Setting up libpython-stdlib:armhf (2.7.14-4) ...
Setting up libhwloc-plugins (1.11.9-1+rpi1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up automake (1:1.15.1-3) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up man-db (2.8.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libgts-bin (0.7.6+darcs121130-4) ...
Setting up python (2.7.14-4) ...
Setting up libtool (2.4.6-2) ...
Setting up libpython3-stdlib:armhf (3.6.4-1) ...
Setting up libibverbs1:armhf (17.0-1) ...
Setting up libk5crypto3:armhf (1.16-2) ...
Setting up libhdf5-cpp-100:armhf (1.10.0-patch1+docs-4) ...
Setting up po-debconf (1.0.20) ...
Setting up libhwloc-dev:armhf (1.11.9-1+rpi1) ...
Setting up libhdf5-dev (1.10.0-patch1+docs-4) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up ibverbs-providers:armhf (17.0-1) ...
Setting up libopenmpi2:armhf (2.1.1-8+rpi1) ...
Setting up libkrb5-3:armhf (1.16-2) ...
Setting up libibverbs-dev:armhf (17.0-1) ...
Setting up libopenmpi-dev (2.1.1-8+rpi1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/mpi (mpi) in auto mode
Setting up mpi-default-dev (1.10) ...
Setting up libgssapi-krb5-2:armhf (1.16-2) ...
Setting up libcurl3-gnutls:armhf (7.58.0-2) ...
Setting up libnetcdf13:armhf (1:4.6.0-2) ...
Setting up libcurl4-gnutls-dev:armhf (7.58.0-2) ...
Setting up libnetcdf-dev (1:4.6.0-2) ...
Setting up dh-autoreconf (16) ...
Setting up python3 (3.6.4-1) ...
Setting up libglib2.0-dev-bin (2.56.0-2) ...
Setting up libglib2.0-dev:armhf (2.56.0-2) ...
Setting up dh-strip-nondeterminism (0.040-1) ...
Setting up python3-lib2to3 (3.6.5~rc1-1) ...
Setting up dh-python (2.20170125) ...
Setting up python3-distutils (3.6.5~rc1-1) ...
Setting up debhelper (11.1.5) ...
Setting up libgts-dev:armhf (0.7.6+darcs121130-4) ...
Setting up python3.6 (3.6.5~rc1-1) ...
Setting up dh-exec (0.23) ...
Setting up sbuild-build-depends-gerris-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-2+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.4.0-79-generic armhf (armv8l)
Toolchain package versions: binutils_2.30-7+rpi1 dpkg-dev_1.19.0.5 g++-7_7.3.0-11 gcc-7_7.3.0-11 libc6-dev_2.27-2+rpi1 libstdc++-7-dev_7.3.0-11 libstdc++6_8-20180218-1+rpi1 linux-libc-dev_4.15.4-1+rpi1
Package versions: adduser_3.117 apt_1.6~beta1 autoconf_2.69-11 automake_1:1.15.1-3 autopoint_0.19.8.1-4 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.44 bash_4.4.18-1.1 binutils_2.30-7+rpi1 binutils-arm-linux-gnueabihf_2.30-7+rpi1 binutils-common_2.30-7+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.4 build-essential_12.4 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.3.0-11 dash_0.5.8-2.10 dbus_1.12.6-2 dbus-user-session_1.12.6-2 debconf_1.5.66 debhelper_11.1.5 debianutils_4.8.4 dh-autoreconf_16 dh-exec_0.23 dh-python_2.20170125 dh-strip-nondeterminism_0.040-1 diffutils_1:3.6-1 dirmngr_2.2.5-1 dmsetup_2:1.02.145-4.1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.0-1 e2fsprogs_1.44.0-1 e2fsprogs-l10n_1.44.0-1 fakeroot_1.22-2 fdisk_2.31.1-0.4 file_1:5.32-2 findutils_4.6.0+git+20170828-2 g++_4:7.2.0-1d1 g++-7_7.3.0-11 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1 gcc-5-base_5.5.0-8 gcc-7_7.3.0-11 gcc-7-base_7.3.0-11 gcc-8-base_8-20180218-1+rpi1 gettext_0.19.8.1-4 gettext-base_0.19.8.1-4 gfortran_4:7.2.0-1d1 gfortran-7_7.3.0-11 gnupg_2.2.5-1 gnupg-agent_2.2.5-1 gnupg-l10n_2.2.5-1 gnupg-utils_2.2.5-1 gpg_2.2.5-1 gpg-agent_2.2.5-1 gpg-wks-client_2.2.5-1 gpg-wks-server_2.2.5-1 gpgconf_2.2.5-1 gpgsm_2.2.5-1 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5 hdf5-helpers_1.10.0-patch1+docs-4 hostname_3.20 ibverbs-providers_17.0-1 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 libacl1_2.2.52-3 libaec-dev_1.0.2-1 libaec0_1.0.2-1 libapparmor1_2.12-3 libapt-pkg5.0_1.6~beta1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-1.1 libasan4_7.3.0-11 libassuan0_2.5.1-2 libatomic1_8-20180218-1+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.2-1 libaudit1_1:2.8.2-1 libbinutils_2.30-7+rpi1 libblkid1_2.31.1-0.4 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-2+rpi1 libc-dev-bin_2.27-2+rpi1 libc6_2.27-2+rpi1 libc6-dev_2.27-2+rpi1 libcap-ng0_0.7.7-3.1+b1 libcap2_1:2.25-1.2 libcc1-0_8-20180218-1+rpi1 libcilkrts5_7.3.0-11 libcom-err2_1.44.0-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.1-1 libcryptsetup4_2:1.7.5-1 libcurl3-gnutls_7.58.0-2 libcurl4-gnutls-dev_7.58.0-2 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.6-2 libdebconfclient0_0.241 libdevmapper1.02.1_2:1.02.145-4.1 libdpkg-perl_1.19.0.5 libdrm-common_2.4.90-1+rpi1 libdrm2_2.4.90-1+rpi1 libelf1_0.170-0.3 libexpat1_2.2.5-3 libext2fs2_1.44.0-1 libfakeroot_1.22-2 libfdisk1_2.31.1-0.4 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.040-1 libgcc-7-dev_7.3.0-11 libgcc1_1:8-20180218-1+rpi1 libgcrypt20_1.8.1-4 libgdbm-compat4_1.14.1-4 libgdbm3_1.8.3-14 libgdbm5_1.14.1-4 libgfortran-7-dev_7.3.0-11 libgfortran4_7.3.0-11 libglib2.0-0_2.56.0-2 libglib2.0-bin_2.56.0-2 libglib2.0-data_2.56.0-2 libglib2.0-dev_2.56.0-2 libglib2.0-dev-bin_2.56.0-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8-20180218-1+rpi1 libgpg-error0_1.27-6 libgsl-dev_2.4+dfsg-6 libgsl23_2.4+dfsg-6 libgslcblas0_2.4+dfsg-6 libgssapi-krb5-2_1.16-2 libgts-0.7-5_0.7.6+darcs121130-4 libgts-bin_0.7.6+darcs121130-4 libgts-dev_0.7.6+darcs121130-4 libhdf5-100_1.10.0-patch1+docs-4 libhdf5-cpp-100_1.10.0-patch1+docs-4 libhdf5-dev_1.10.0-patch1+docs-4 libhogweed4_3.4-1 libhwloc-dev_1.11.9-1+rpi1 libhwloc-plugins_1.11.9-1+rpi1 libhwloc5_1.11.9-1+rpi1 libibverbs-dev_17.0-1 libibverbs1_17.0-1 libicu57_57.1-9 libidn11_1.33-2.1 libidn2-0_2.0.4-1.1 libip4tc0_1.6.2-1 libisl15_0.18-1 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjson-c3_0.12.1-1.3 libk5crypto3_1.16-2 libkeyutils1_1.5.9-9.2 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libkrb5-3_1.16-2 libkrb5support0_1.16-2 libksba8_1.3.5-2 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 libltdl-dev_2.4.6-2 libltdl7_2.4.6-2 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-2 libmagic1_1:5.32-2 libmount1_2.31.1-0.4 libmpc3_1.1.0-1 libmpdec2_2.4.2-1 libmpfr6_4.0.1-1 libncurses5_6.1-1 libncursesw5_6.1-1 libnetcdf-dev_1:4.6.0-2 libnetcdf13_1:4.6.0-2 libnettle6_3.4-1 libnghttp2-14_1.31.0-1 libnl-3-200_3.2.27-2 libnl-route-3-200_3.2.27-2 libnpth0_1.5-3 libnss-systemd_238-2 libopenmpi-dev_2.1.1-8+rpi1 libopenmpi2_2.1.1-8+rpi1 libp11-kit0_0.23.9-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_238-2 libpam0g_1.1.8-3.7 libpciaccess0_0.13.4-1 libpcre16-3_2:8.39-9 libpcre3_2:8.39-9 libpcre3-dev_2:8.39-9 libpcre32-3_2:8.39-9 libpcrecpp0v5_2:8.39-9 libperl5.24_5.24.1-7 libperl5.26_5.26.1-5 libpipeline1_1.5.0-1 libplymouth4_0.9.3-2 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-4 libpsl5_0.19.1-5 libpython-stdlib_2.7.14-4 libpython2.7-minimal_2.7.14-7 libpython2.7-stdlib_2.7.14-7 libpython3-stdlib_3.6.4-1 libpython3.6-minimal_3.6.5~rc1-1 libpython3.6-stdlib_3.6.5~rc1-1 libreadline7_7.0-3 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.12-1 libsmartcols1_2.31.1-0.4 libsqlite3-0_3.22.0-1 libss2_1.44.0-1 libssh2-1_1.8.0-1 libssl1.1_1.1.0g-2 libstdc++-7-dev_7.3.0-11 libstdc++6_8-20180218-1+rpi1 libsystemd0_238-2 libsz2_1.0.2-1 libtasn1-6_4.13-2 libtimedate-perl_2.3000-2 libtinfo5_6.1-1 libtool_2.4.6-2 libubsan0_7.3.0-11 libudev1_238-2 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.4 libxml2_2.9.4+dfsg1-6.1 linux-base_4.5 linux-libc-dev_4.15.4-1+rpi1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.2-1 mawk_1.3.3-17 mime-support_3.60 mount_2.31.1-0.4 mpi-default-dev_1.10 multiarch-support_2.27-2+rpi1 nano_2.9.4-1 ncurses-base_6.1-1 ncurses-bin_6.1-1 ocl-icd-libopencl1_2.2.12-1 openmpi-common_2.1.1-8+rpi1 openssl_1.1.0g-2 passwd_1:4.5-1 patch_2.7.6-1 perl_5.26.1-5 perl-base_5.26.1-5 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.1-5 pinentry-curses_1.1.0-1 pkg-config_0.29-4 plymouth_0.9.3-2 po-debconf_1.0.20 procps_2:3.3.12-4 python_2.7.14-4 python-minimal_2.7.14-4 python2.7_2.7.14-7 python2.7-minimal_2.7.14-7 python3_3.6.4-1 python3-distutils_3.6.5~rc1-1 python3-lib2to3_3.6.5~rc1-1 python3-minimal_3.6.4-1 python3.6_3.6.5~rc1-1 python3.6-minimal_3.6.5~rc1-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-gerris-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_238-2 systemd-sysv_238-2 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 tzdata_2018c-1 udev_238-2 util-linux_2.31.1-0.4 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5 zlib1g-dev_1:1.2.8.dfsg-5

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Nov 23 20:51:51 2017 UTC
gpgv:                using RSA key BBBD45EA818AB86FF67E7285D3E17383CFA7FF06
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./gerris_20131206+dfsg-18.dsc
dpkg-source: info: extracting gerris in /<<BUILDDIR>>/gerris-20131206+dfsg
dpkg-source: info: unpacking gerris_20131206+dfsg.orig.tar.gz
dpkg-source: info: unpacking gerris_20131206+dfsg-18.debian.tar.xz
dpkg-source: info: applying 01_automake_doc_examples
dpkg-source: info: applying 02_fix_makefiles.patch
dpkg-source: info: applying 03_build_funct.patch
dpkg-source: info: applying 04_replace_ffmpeg_by_avconv.patch
dpkg-source: info: applying 05_reproducible_build.patch

Check disk space
----------------

Sufficient free space for build

Hack binNMU version
-------------------

Created changelog entry for binNMU version 20131206+dfsg-18+b10

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-841538e7-7e95-4a20-b662-2c80c5a6c346
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package gerris
dpkg-buildpackage: info: source version 20131206+dfsg-18+b10
dpkg-buildpackage: info: source distribution buster-staging
 dpkg-source --before-build gerris-20131206+dfsg
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean
   dh_clean
 debian/rules build-arch
dh build-arch
   dh_update_autotools_config -a
   dh_autoreconf -a
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:50: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated.  For more info, see:
configure.ac:50: http://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation
configure.ac:108: installing './compile'
configure.ac:50: installing './missing'
doc/Makefile.am:9: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
doc/Makefile.am:12: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory,
doc/Makefile.am:12: but option 'subdir-objects' is disabled
automake: warning: possible forward-incompatibility.
automake: At least a source file is in a subdirectory, but the 'subdir-objects'
automake: automake option hasn't been enabled.  For now, the corresponding output
automake: object file(s) will be placed in the top-level directory.  However,
automake: this behaviour will change in future Automake versions: they will
automake: unconditionally cause object files to be placed in the same subdirectory
automake: of the corresponding sources.
automake: You are advised to start using 'subdir-objects' option throughout your
automake: project, to avoid future incompatibilities.
doc/Makefile.am: installing './depcomp'
doc/examples/Makefile.am:118: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
doc/examples/Makefile.am:123: warning: source file '$(top_srcdir)/src/init.c' is in a subdirectory,
doc/examples/Makefile.am:123: but option 'subdir-objects' is disabled
parallel-tests: installing './test-driver'
modules/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
src/Makefile.am:7: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
tools/Makefile.am:3: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_configure -- --enable-mpi
	./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --disable-maintainer-mode --disable-dependency-tracking --enable-mpi
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for mpicc... yes
checking for gcc... mpicc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether mpicc accepts -g... yes
checking for mpicc option to accept ISO C89... none needed
checking whether mpicc understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of mpicc... none
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by mpicc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... dlltool
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from mpicc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... mpicc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if mpicc supports -fno-rtti -fno-exceptions... no
checking for mpicc option to produce PIC... -fPIC -DPIC
checking if mpicc PIC flag -fPIC -DPIC works... yes
checking if mpicc static flag -static works... no
checking if mpicc supports -c -o file.o... yes
checking if mpicc supports -c -o file.o... (cached) yes
checking whether the mpicc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for gawk... (cached) mawk
checking for library containing strerror... none required
checking for ANSI C header files... (cached) yes
checking whether pointers can be stored in doubles... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for GTS... yes
checking whether modules are supported... yes
checking for pkg-config... yes
checking for m4... yes
checking check whether m4 accepts the -P option... yes
checking for pj_fwd in -lproj... no
configure: WARNING: libproj not found. Map module will not be available.
checking proj_api.h usability... no
checking proj_api.h presence... no
checking for proj_api.h... no
checking for gsl-config... /usr/bin/gsl-config
checking for GSL - version >= 0.2.5... yes
checking for nc_open in -lnetcdf... yes
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for g77... no
checking for xlf... no
checking for f77... f77
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether f77 accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for f77 option to produce PIC... -fPIC
checking if f77 PIC flag -fPIC works... yes
checking if f77 static flag -static works... yes
checking if f77 supports -c -o file.o... yes
checking if f77 supports -c -o file.o... (cached) yes
checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking how to get verbose linking output from f77... -v
checking for Fortran 77 libraries of f77...  -L/usr/lib/gcc/arm-linux-gnueabihf/7 -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/7/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking for ode-config... no
configure: WARNING: ODE not found. ode module will not be available.
checking for HYPRE_IJMatrixCreate in -lHYPRE... no
configure: WARNING: HYPRE not found. hypre Module won't be available.
checking for lis_initialize in -llis... no
configure: WARNING: lis not found. lis Module won't be available.
checking for FFTW3... no
checking fenv.h usability... yes
checking fenv.h presence... yes
checking for fenv.h... yes
checking for unistd.h... (cached) yes
checking getopt.h usability... yes
checking getopt.h presence... yes
checking for getopt.h... yes
checking for getopt_long... yes
checking for g_mkdtemp... yes
checking for open_memstream... yes
checking for funopen... no
checking for open_memstream... (cached) yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/gerris2D.pc
config.status: creating src/gerris3D.pc
config.status: creating tools/Makefile
config.status: creating modules/Makefile
config.status: creating modules/RStarTree/Makefile
config.status: creating modules/kdt/Makefile
config.status: creating modules/fes2004/Makefile
config.status: creating modules/wavewatch/Makefile
config.status: creating modules/culvert/Makefile
config.status: creating test/Makefile
config.status: creating doc/Makefile
config.status: creating doc/tutorial/Makefile
config.status: creating doc/examples/Makefile
config.status: creating doc/manpages/Makefile
config.status: creating doc/examples/gfs2doc
config.status: creating doc/examples/gfs-highlight
config.status: creating doc/examples/crossref.sh
config.status: creating desktop/Makefile
config.status: creating debian/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands

Configuration summary

  System            = arm-unknown-linux-gnueabihf
  C   Compiler      = mpicc
  C   Flags         = -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99
  MPI enabled       = yes
  GModule support   = yes
  pkg-config        = yes
  m4                = yes
  m4 options        = -P
  open_memstream    = yes

Modules

  map               = no
  tide              = yes
  stokes            = yes
  wavewatch         = no
  hypre             = no
  lis               = no
  agmg              = no
  ode               = no
  bubbles           = yes
  fft               = no

make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
   dh_auto_build -a
	make -j1
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make  all-recursive
make[2]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
Making all in src
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make  all-am
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ftt.lo `test -f 'ftt.c' || echo './'`ftt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from ftt.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-fluid.lo `test -f 'fluid.c' || echo './'`fluid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from fluid.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
fluid.c:126:20: warning: 'interpolate_1D2' defined but not used [-Wunused-function]
 static GfsGradient interpolate_1D2 (FttCell * cell,
                    ^~~~~~~~~~~~~~~
fluid.c: In function 'face_bilinear':
fluid.c:1151:37: warning: 'd[2]' is used uninitialized in this function [-Wuninitialized]
   d1[0] = d[1]; d1[1] = d[0]; d1[2] = d[2];
                               ~~~~~~^~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-variable.lo `test -f 'variable.c' || echo './'`variable.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from variable.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-output.lo `test -f 'output.c' || echo './'`output.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from output.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-solid.lo `test -f 'solid.c' || echo './'`solid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from solid.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-poisson.lo `test -f 'poisson.c' || echo './'`poisson.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from poisson.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-advection.lo `test -f 'advection.c' || echo './'`advection.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from advection.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-boundary.lo `test -f 'boundary.c' || echo './'`boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from boundary.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-mpi_boundary.lo `test -f 'mpi_boundary.c' || echo './'`mpi_boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from mpi_boundary.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-timestep.lo `test -f 'timestep.c' || echo './'`timestep.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from timestep.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-domain.lo `test -f 'domain.c' || echo './'`domain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from domain.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-init.lo `test -f 'init.c' || echo './'`init.c
init.c:33:0: warning: "_GNU_SOURCE" redefined
 # define _GNU_SOURCE
 
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/fenv.h:26,
                 from init.c:34:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-refine.lo `test -f 'refine.c' || echo './'`refine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from refine.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-event.lo `test -f 'event.c' || echo './'`event.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from event.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-simulation.lo `test -f 'simulation.c' || echo './'`simulation.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from simulation.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-graphic.lo `test -f 'graphic.c' || echo './'`graphic.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from graphic.c:30:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
graphic.c: In function 'grow_curve':
graphic.c:1986:17: warning: variable 'p1' set but not used [-Wunused-but-set-variable]
       FttVector p1;
                 ^~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-adaptive.lo `test -f 'adaptive.c' || echo './'`adaptive.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from adaptive.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-source.lo `test -f 'source.c' || echo './'`source.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from source.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-tension.lo `test -f 'tension.c' || echo './'`tension.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from tension.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-vof.lo `test -f 'vof.c' || echo './'`vof.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from vof.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
vof.c: In function 'gfs_height_curvature':
vof.c:2619:11: warning: unused variable 'area' [-Wunused-variable]
   gdouble area = gfs_vof_center (cell, t, &fc);
           ^~~~
vof.c: In function 'gfs_height_curvature_new':
vof.c:2871:11: warning: unused variable 'area' [-Wunused-variable]
   gdouble area = gfs_vof_center (cell, GFS_VARIABLE_TRACER_VOF (t), &fc);
           ^~~~
At top level:
vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function]
 static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v)
                ^~~~~~~~~~
vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function]
 static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n)
             ^~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-utils.lo `test -f 'utils.c' || echo './'`utils.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from utils.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-ocean.lo `test -f 'ocean.c' || echo './'`ocean.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from ocean.c:24:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
ocean.c: In function 'correct_normal_velocity':
ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable]
   FttFaceType type;
               ^~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-wave.lo `test -f 'wave.c' || echo './'`wave.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from wave.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-levelset.lo `test -f 'levelset.c' || echo './'`levelset.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from levelset.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-cartesian.lo `test -f 'cartesian.c' || echo './'`cartesian.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from cartesian.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-surface.lo `test -f 'surface.c' || echo './'`surface.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from simulation.h:27,
                 from surface.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-unstructured.lo `test -f 'unstructured.c' || echo './'`unstructured.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from unstructured.h:24,
                 from unstructured.c:24:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-map.lo `test -f 'map.c' || echo './'`map.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from advection.h:27,
                 from timestep.h:27,
                 from variable.h:29,
                 from map.h:27,
                 from map.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
map.c: In function 'gfs_map_read':
map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable]
   gboolean class_changed = FALSE;
            ^~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-river.lo `test -f 'river.c' || echo './'`river.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from river.c:55:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-moving.lo `test -f 'moving.c' || echo './'`moving.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from moving.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from moving.c:49:0:
moving2.c: In function 'second_order_face_fractions':
moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable]
   gdouble dt1, dt2, dto1, dto2, s1, s2;
                                 ^~
moving2.c: In function 'old_solid_fractions_from_children':
moving2.c:731:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
     for (i = 0; i < FTT_CELLS; i++)
     ^~~
moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
       gfs_cell_init_solid_fractions_from_children (cell);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-balance.lo `test -f 'balance.c' || echo './'`balance.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from event.h:27,
                 from balance.h:27,
                 from balance.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-metric.lo `test -f 'metric.c' || echo './'`metric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from metric.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable]
 static double kpu_2d_l4[17][3] = {
               ^~~~~~~~~
metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable]
 static double kpu_2d_l2[5][3] = {
               ^~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libgfs2D_la-particle.lo `test -f 'particle.c' || echo './'`particle.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from particle.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -Wl,-z,now -o libgfs2D.la -rpath /usr/lib/arm-linux-gnueabihf libgfs2D_la-ftt.lo libgfs2D_la-fluid.lo libgfs2D_la-variable.lo libgfs2D_la-output.lo libgfs2D_la-solid.lo libgfs2D_la-poisson.lo libgfs2D_la-advection.lo libgfs2D_la-boundary.lo libgfs2D_la-mpi_boundary.lo libgfs2D_la-timestep.lo libgfs2D_la-domain.lo libgfs2D_la-init.lo libgfs2D_la-refine.lo libgfs2D_la-event.lo libgfs2D_la-simulation.lo libgfs2D_la-graphic.lo libgfs2D_la-adaptive.lo libgfs2D_la-source.lo libgfs2D_la-tension.lo libgfs2D_la-vof.lo libgfs2D_la-utils.lo libgfs2D_la-ocean.lo libgfs2D_la-wave.lo libgfs2D_la-levelset.lo libgfs2D_la-cartesian.lo libgfs2D_la-surface.lo libgfs2D_la-unstructured.lo libgfs2D_la-map.lo libgfs2D_la-river.lo libgfs2D_la-moving.lo libgfs2D_la-balance.lo libgfs2D_la-metric.lo libgfs2D_la-particle.lo   -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ftt.lo ftt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from ftt.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o fluid.lo fluid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from fluid.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
fluid.c: In function 'gfs_cell_coarse_fine':
fluid.c:1918:42: warning: unused variable 'gz4' [-Wunused-variable]
       double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa;
                                          ^~~
fluid.c:1918:14: warning: unused variable 'gz3' [-Wunused-variable]
       double gz3 = g.z*(a[3] + a[7])/sa, gz4 = - g.z*(a[1] + a[5])/sa;
              ^~~
fluid.c:1916:42: warning: unused variable 'gy4' [-Wunused-variable]
       double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa;
                                          ^~~
fluid.c:1916:14: warning: unused variable 'gy3' [-Wunused-variable]
       double gy3 = g.y*(a[6] + a[7])/sa, gy4 = - g.y*(a[4] + a[5])/sa;
              ^~~
fluid.c:1914:42: warning: unused variable 'gx4' [-Wunused-variable]
       double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa;
                                          ^~~
fluid.c:1914:14: warning: unused variable 'gx3' [-Wunused-variable]
       double gx3 = g.x*(a[4] + a[6])/sa, gx4 = - g.x*(a[5] + a[7])/sa;
              ^~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o variable.lo variable.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from variable.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o output.lo output.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from output.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o solid.lo solid.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from solid.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
solid.c: In function 'set_solid_fractions_from_surface':
solid.c:561:21: warning: comparison between 'FttComponent {aka enum <anonymous>}' and 'enum <anonymous>' [-Wenum-compare]
       for (c = 1; c < FTT_NEIGHBORS; c++)
                     ^
In file included from solid.c:338:0:
At top level:
isocube.h:95:21: warning: 'corner' defined but not used [-Wunused-variable]
 static FttDirection corner[8][3] = {
                     ^~~~~~
isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable]
 static FttVector cvertex[8] = {
                  ^~~~~~~
isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable]
 static guint connectv[12][2][4] = {
              ^~~~~~~~
isocube.h:47:18: warning: 'edge' defined but not used [-Wunused-variable]
 static FttVector edge[12][2] = {
                  ^~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o poisson.lo poisson.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from poisson.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o advection.lo advection.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from advection.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o boundary.lo boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from boundary.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o mpi_boundary.lo mpi_boundary.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from mpi_boundary.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o timestep.lo timestep.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from timestep.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o domain.lo domain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from domain.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o init.lo init.c
init.c:33:0: warning: "_GNU_SOURCE" redefined
 # define _GNU_SOURCE
 
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/fenv.h:26,
                 from init.c:34:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o refine.lo refine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from refine.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o event.lo event.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from event.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o simulation.lo simulation.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from simulation.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o graphic.lo graphic.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from graphic.c:30:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from graphic.c:42:0:
isocube.h:66:18: warning: 'cvertex' defined but not used [-Wunused-variable]
 static FttVector cvertex[8] = {
                  ^~~~~~~
isocube.h:52:14: warning: 'connectv' defined but not used [-Wunused-variable]
 static guint connectv[12][2][4] = {
              ^~~~~~~~
isocube.h:39:14: warning: 'face_v' defined but not used [-Wunused-variable]
 static guint face_v[6][4] = {
              ^~~~~~
isocube.h:31:14: warning: 'face' defined but not used [-Wunused-variable]
 static guint face[6][4][2] = {
              ^~~~
isocube.h:27:18: warning: 'vertex' defined but not used [-Wunused-variable]
 static FttVector vertex[8] = {
                  ^~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o adaptive.lo adaptive.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from adaptive.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o source.lo source.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from source.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o tension.lo tension.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from tension.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o vof.lo vof.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from vof.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
vof.c:2682:13: warning: 'curvature_from_h' defined but not used [-Wunused-function]
 static void curvature_from_h (FttCell * cell, GfsDomain * domain,
             ^~~~~~~~~~~~~~~~
vof.c:2646:16: warning: 'neighboring_column' defined but not used [-Wunused-function]
 static gdouble neighboring_column (FttCell * cell,
                ^~~~~~~~~~~~~~~~~~
vof.c:1771:16: warning: 'face_value' defined but not used [-Wunused-function]
 static gdouble face_value (FttCell * cell, FttDirection d, GfsVariable * v)
                ^~~~~~~~~~
vof.c:850:13: warning: 'youngs_normal' defined but not used [-Wunused-function]
 static void youngs_normal (FttCell * cell, GfsVariable * v, FttVector * n)
             ^~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o utils.lo utils.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from utils.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ocean.lo ocean.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from ocean.c:24:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
ocean.c: In function 'correct_normal_velocity':
ocean.c:45:15: warning: variable 'type' set but not used [-Wunused-but-set-variable]
   FttFaceType type;
               ^~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o wave.lo wave.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from wave.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o levelset.lo levelset.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from levelset.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o cartesian.lo cartesian.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from cartesian.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o surface.lo surface.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from simulation.h:27,
                 from surface.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o unstructured.lo unstructured.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from unstructured.h:24,
                 from unstructured.c:24:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o map.lo map.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from fluid.h:23,
                 from boundary.h:23,
                 from domain.h:23,
                 from advection.h:27,
                 from timestep.h:27,
                 from variable.h:29,
                 from map.h:27,
                 from map.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
map.c: In function 'gfs_map_read':
map.c:34:12: warning: variable 'class_changed' set but not used [-Wunused-but-set-variable]
   gboolean class_changed = FALSE;
            ^~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o river.lo river.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from river.c:55:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o moving.lo moving.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from moving.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from moving.c:49:0:
moving2.c: In function 'second_order_face_fractions':
moving2.c:257:33: warning: variable 's1' set but not used [-Wunused-but-set-variable]
   gdouble dt1, dt2, dto1, dto2, s1, s2;
                                 ^~
moving2.c: In function 'old_solid_fractions_from_children':
moving2.c:731:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
     for (i = 0; i < FTT_CELLS; i++)
     ^~~
moving2.c:735:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
       gfs_cell_init_solid_fractions_from_children (cell);
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o balance.lo balance.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from event.h:27,
                 from balance.h:27,
                 from balance.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o metric.lo metric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from metric.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
metric.c:241:15: warning: 'kpu_2d_l4' defined but not used [-Wunused-variable]
 static double kpu_2d_l4[17][3] = {
               ^~~~~~~~~
metric.c:221:15: warning: 'kpu_2d_l2' defined but not used [-Wunused-variable]
 static double kpu_2d_l2[5][3] = {
               ^~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o particle.lo particle.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from particle.c:23:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -Wl,-z,relro -Wl,-z,now -o libgfs3D.la -rpath /usr/lib/arm-linux-gnueabihf ftt.lo fluid.lo variable.lo output.lo solid.lo poisson.lo advection.lo boundary.lo mpi_boundary.lo timestep.lo domain.lo init.lo refine.lo event.lo simulation.lo graphic.lo adaptive.lo source.lo tension.lo vof.lo utils.lo ocean.lo wave.lo levelset.lo cartesian.lo surface.lo unstructured.lo map.lo river.lo moving.lo balance.lo metric.lo particle.lo   -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris2D-gerris.o `test -f 'gerris.c' || echo './'`gerris.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from gerris.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gerris2D gerris2D-gerris.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -DG_LOG_DOMAIN=\"Gfs\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -DGFS_DATA_DIR=\"/usr/share/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gerris.o gerris.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from gerris.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gerris3D gerris.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
Making all in modules
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making all in RStarTree
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RStarTree.lo `test -f 'RStarTree.c' || echo './'`RStarTree.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from RStarTree.c:3:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
RStarTree.c: In function 'BasicCheck':
RStarTree.c:824:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
     fprintf(stderr,"%s %ld\n","sizeof(byte):",sizeof(byte));
                        ~~^
                        %d
RStarTree.c:831:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
     fprintf(stderr,"%s %ld\n","sizeof(int):",sizeof(int));
                        ~~^
                        %d
RStarTree.c:838:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
     fprintf(stderr,"%s %ld\n","sizeof(typinfo):",sizeof(typinfo));
                        ~~^
                        %d
RStarTree.c:839:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
     fprintf(stderr,"%s %ld\n","    sizeof(int):",sizeof(int));
                        ~~^
                        %d
RStarTree.c:846:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
     fprintf(stderr,"%s %ld\n"," sizeof(typpagedir):",sizeof(typpagedir));
                        ~~^
                        %d
RStarTree.c:847:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
     fprintf(stderr,"%s %ld\n","sizeof(typfixblock):",sizeof(typfixblock));
                        ~~^
                        %d
RStarTree.c:854:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
     fprintf(stderr,"%s %ld\n","sizeof(typparameters):",sizeof(typparameters));
                        ~~^
                        %d
RStarTree.c:855:26: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'unsigned int' [-Wformat=]
     fprintf(stderr,"%s %ld\n","  sizeof(typfixblock):",sizeof(typfixblock));
                        ~~^
                        %d
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInstDel.lo `test -f 'RSTInstDel.c' || echo './'`RSTInstDel.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
                 from RStarTree.h:28,
                 from RSTInstDel.c:4:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
RSTInstDel.c: In function 'SplitAndDistributData':
RSTInstDel.c:748:7: warning: 'axisindex' may be used uninitialized in this function [-Wmaybe-uninitialized]
       axisindex;
       ^~~~~~~~~
RSTInstDel.c:971:6: warning: 'axis' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (axis != (*par).maxdim || axsortside != currsortside) {
      ^
RSTInstDel.c:744:32: warning: 'axsortside' may be used uninitialized in this function [-Wmaybe-uninitialized]
   Side sortside, currsortside, axsortside;
                                ^~~~~~~~~~
RSTInstDel.c:952:8: warning: 'backvalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (backvalvalue <= validvalue) {
        ^
RSTInstDel.c:952:8: warning: 'validvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
RSTInstDel.c:956:14: warning: 'backvaledge' may be used uninitialized in this function [-Wmaybe-uninitialized]
     validedge= validedge+backvaledge;
     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
RSTInstDel.c:956:14: warning: 'validedge' may be used uninitialized in this function [-Wmaybe-uninitialized]
RSTInstDel.c: In function 'SplitAndDistributDir':
RSTInstDel.c:482:7: warning: 'axisindex' may be used uninitialized in this function [-Wmaybe-uninitialized]
       axisindex;
       ^~~~~~~~~
RSTInstDel.c:705:6: warning: 'axis' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (axis != (*par).maxdim || axsortside != currsortside) {
      ^
RSTInstDel.c:478:32: warning: 'axsortside' may be used uninitialized in this function [-Wmaybe-uninitialized]
   Side sortside, currsortside, axsortside;
                                ^~~~~~~~~~
RSTInstDel.c:686:8: warning: 'backvalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (backvalvalue <= validvalue) {
        ^
RSTInstDel.c:686:8: warning: 'validvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
RSTInstDel.c:690:14: warning: 'backvaledge' may be used uninitialized in this function [-Wmaybe-uninitialized]
     validedge= validedge+backvaledge;
     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
RSTInstDel.c:690:14: warning: 'validedge' may be used uninitialized in this function [-Wmaybe-uninitialized]
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTJoin.lo `test -f 'RSTJoin.c' || echo './'`RSTJoin.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
                 from RStarTree.h:28,
                 from RSTJoin.c:4:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTUtil.lo `test -f 'RSTUtil.c' || echo './'`RSTUtil.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
                 from RStarTree.h:28,
                 from RSTUtil.c:4:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
RSTUtil.c: In function 'Covers':
RSTUtil.c:204:7: warning: variable 'maxdim' set but not used [-Wunused-but-set-variable]
   int maxdim;
       ^~~~~~
RSTUtil.c: In function 'ChooseSubtree':
RSTUtil.c:546:16: warning: variable 'inv' set but not used [-Wunused-but-set-variable]
   int maxexam, inv;
                ^~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInOut.lo `test -f 'RSTInOut.c' || echo './'`RSTInOut.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
                 from RStarTree.h:28,
                 from RSTInOut.c:4:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTInterUtil.lo `test -f 'RSTInterUtil.c' || echo './'`RSTInterUtil.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
                 from RStarTree.h:28,
                 from RSTInterUtil.c:4:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
RSTInterUtil.c: In function 'SetCheckDir':
RSTInterUtil.c:208:7: warning: variable 'PACKEDSIZE_DIRnofentries' set but not used [-Wunused-but-set-variable]
       PACKEDSIZE_DIRnofentries, REALSIZE_DIRnofentries;
       ^~~~~~~~~~~~~~~~~~~~~~~~
RSTInterUtil.c:207:7: warning: variable 'PACKEDdirentrylen' set but not used [-Wunused-but-set-variable]
       PACKEDdirentrylen, REALdirentrylen,
       ^~~~~~~~~~~~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libcSmRST_la-RSTQuery.lo `test -f 'RSTQuery.c' || echo './'`RSTQuery.c
In file included from /usr/include/arm-linux-gnueabihf/sys/file.h:21:0,
                 from RStarTree.h:28,
                 from RSTQuery.c:4:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o libcSmRST.la  libcSmRST_la-RStarTree.lo libcSmRST_la-RSTInstDel.lo libcSmRST_la-RSTJoin.lo libcSmRST_la-RSTUtil.lo libcSmRST_la-RSTInOut.lo libcSmRST_la-RSTInterUtil.lo libcSmRST_la-RSTQuery.lo  
ar: `u' modifier ignored since `D' is the default (see `U')
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
Making all in kdt
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libkdt_la-kdt.lo `test -f 'kdt.c' || echo './'`kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from kdt.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
kdt.c:450:13: warning: 'kdt_rect_write' defined but not used [-Wunused-function]
 static void kdt_rect_write (const KdtRect rect, FILE * fp)
             ^~~~~~~~~~~~~~
kdt.c:252:13: warning: 'kdt_write' defined but not used [-Wunused-function]
 static void kdt_write (KdtHeap * h, FILE * fp)
             ^~~~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o libkdt.la  libkdt_la-kdt.lo  
ar: `u' modifier ignored since `D' is the default (see `U')
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o xyz2kdt-xyz2kdt.o `test -f 'xyz2kdt.c' || echo './'`xyz2kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from xyz2kdt.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o xyz2kdt xyz2kdt-xyz2kdt.o -lkdt -lm 
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdt2kdt-kdt2kdt.o `test -f 'kdt2kdt.c' || echo './'`kdt2kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from kdt2kdt.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o kdt2kdt kdt2kdt-kdt2kdt.o -lkdt -lm 
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o kdtquery-kdtquery.o `test -f 'kdtquery.c' || echo './'`kdtquery.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from kdtquery.c:21:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o kdtquery kdtquery-kdtquery.o -lkdt -lm 
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
Making all in fes2004
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_alloc.lo `test -f 'fes2004_alloc.c' || echo './'`fes2004_alloc.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from fes2004_lib.h:12,
                 from fes2004_alloc.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_error.lo `test -f 'fes2004_error.c' || echo './'`fes2004_error.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from fes2004_error.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
fes2004_error.c:4:6: warning: no previous prototype for 'print_error_1' [-Wmissing-prototypes]
 void print_error_1()
      ^~~~~~~~~~~~~
fes2004_error.c:11:6: warning: no previous prototype for 'print_error_2' [-Wmissing-prototypes]
 void print_error_2()
      ^~~~~~~~~~~~~
fes2004_error.c:18:6: warning: no previous prototype for 'print_error_3' [-Wmissing-prototypes]
 void print_error_3(char *message)
      ^~~~~~~~~~~~~
fes2004_error.c:25:6: warning: no previous prototype for 'print_error_4' [-Wmissing-prototypes]
 void print_error_4(char *message)
      ^~~~~~~~~~~~~
fes2004_error.c:32:6: warning: no previous prototype for 'print_error_5' [-Wmissing-prototypes]
 void print_error_5(char *message)
      ^~~~~~~~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_extraction.lo `test -f 'fes2004_extraction.c' || echo './'`fes2004_extraction.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from fes2004_lib.h:12,
                 from fes2004_extraction.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_init.lo `test -f 'fes2004_init.c' || echo './'`fes2004_init.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from fes2004_lib.h:12,
                 from fes2004_init.c:2:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
fes2004_init.c: In function 'init_spectrum':
fes2004_init.c:42:7: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable]
   int rstatus;
       ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_io.lo `test -f 'fes2004_io.c' || echo './'`fes2004_io.c
In file included from /usr/include/errno.h:25:0,
                 from /usr/include/netcdf.h:16,
                 from fes2004_io.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
fes2004_io.c: In function 'load_netcdf_fes2004_data':
fes2004_io.c:16:9: warning: variable 'rstatus' set but not used [-Wunused-but-set-variable]
   int i,rstatus;
         ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_prediction.lo `test -f 'fes2004_prediction.c' || echo './'`fes2004_prediction.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from fes2004_lib.h:12,
                 from fes2004_prediction.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libfes_la-fes2004_kernel.lo `test -f 'fes2004_kernel.c' || echo './'`fes2004_kernel.c
In file included from /usr/include/errno.h:25:0,
                 from /usr/include/netcdf.h:16,
                 from fes2004_kernel.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
fes2004_kernel.c: In function 'pred_coeur':
fes2004_kernel.c:115:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable]
   double pi;
          ^~
fes2004_kernel.c: In function 'extract_coeur':
fes2004_kernel.c:191:10: warning: variable 'pi' set but not used [-Wunused-but-set-variable]
   double pi;
          ^~
fes2004_kernel.c: In function 'compute_admittance':
fes2004_kernel.c:457:11: warning: variable 'gsl_out' set but not used [-Wunused-but-set-variable]
   int i,n,gsl_out;
           ^~~~~~~
fes2004_kernel.c: In function 'astronomic_angle':
fes2004_kernel.c:663:16: warning: variable 'sin2I' set but not used [-Wunused-but-set-variable]
   double t2,t4,sin2I,s2;
                ^~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o libfes.la  libfes_la-fes2004_alloc.lo libfes_la-fes2004_error.lo libfes_la-fes2004_extraction.lo libfes_la-fes2004_init.lo libfes_la-fes2004_io.lo libfes_la-fes2004_prediction.lo libfes_la-fes2004_kernel.lo  
ar: `u' modifier ignored since `D' is the default (see `U')
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
Making all in wavewatch
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
Making all in culvert
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
/bin/bash ../../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libboyd87_la-boyd87.lo `test -f 'boyd87.c' || echo './'`boyd87.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from boyd87.c:9:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o libboyd87.la  libboyd87_la-boyd87.lo  
ar: `u' modifier ignored since `D' is the default (see `U')
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_inlet-check_inlet.o `test -f 'check_inlet.c' || echo './'`check_inlet.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from check_inlet.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o check_inlet check_inlet-check_inlet.o -lboyd87 -lm 
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o check_outlet-check_outlet.o `test -f 'check_outlet.c' || echo './'`check_outlet.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from check_outlet.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o check_outlet check_outlet-check_outlet.o -lboyd87 -lm 
mpicc -DHAVE_CONFIG_H -I. -I../..   -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o discharge_table-discharge_table.o `test -f 'discharge_table.c' || echo './'`discharge_table.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from discharge_table.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o discharge_table discharge_table-discharge_table.o -lboyd87 -lm 
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon2D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from particulatecommon.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulatecommon2D.la  libparticulatecommon2D_la-particulatecommon.lo  
libtool: warning: '-version-info/-version-number' is ignored for convenience libraries
libtool: warning: '-release' is ignored for convenience libraries
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulatecommon3D_la-particulatecommon.lo `test -f 'particulatecommon.c' || echo './'`particulatecommon.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from particulatecommon.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulatecommon3D.la  libparticulatecommon3D_la-particulatecommon.lo  
libtool: warning: '-version-info/-version-number' is ignored for convenience libraries
libtool: warning: '-release' is ignored for convenience libraries
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libterrain2D_la-terrain.lo `test -f 'terrain.c' || echo './'`terrain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from terrain.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libterrain2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libterrain2D_la-terrain.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o terrain.lo terrain.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from terrain.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libterrain3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris terrain.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lkdt -lkdt -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates2D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from ../src/particle.h:27,
                 from particulatecommon.h:20,
                 from particulates.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulates2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates2D_la-particulates.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libparticulates3D_la-particulates.lo `test -f 'particulates.c' || echo './'`particulates.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from ../src/particle.h:27,
                 from particulatecommon.h:20,
                 from particulates.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libparticulates3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libparticulates3D_la-particulates.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada2D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from okada.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libokada2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada2D_la-okada.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libokada3D_la-okada.lo `test -f 'okada.c' || echo './'`okada.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from okada.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libokada3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libokada3D_la-okada.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libdf33D_la-df3.lo `test -f 'df3.c' || echo './'`df3.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from df3.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libdf33D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libdf33D_la-df3.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro2D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/fluid.h:23,
                 from ../src/boundary.h:23,
                 from ../src/domain.h:23,
                 from ../src/simulation.h:27,
                 from electrohydro.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libelectrohydro2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro2D_la-electrohydro.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libelectrohydro3D_la-electrohydro.lo `test -f 'electrohydro.c' || echo './'`electrohydro.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/fluid.h:23,
                 from ../src/boundary.h:23,
                 from ../src/domain.h:23,
                 from ../src/simulation.h:27,
                 from electrohydro.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libelectrohydro3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libelectrohydro3D_la-electrohydro.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric2D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/fluid.h:23,
                 from ../src/boundary.h:23,
                 from ../src/domain.h:23,
                 from ../src/simulation.h:27,
                 from skewsymmetric.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
skewsymmetric.c: In function 'gfs_skew_symmetric_run':
skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable]
   GfsVariable * p,  * res = NULL, * gmac[FTT_DIMENSION];
                       ^~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libskewsymmetric2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric2D_la-skewsymmetric.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libskewsymmetric3D_la-skewsymmetric.lo `test -f 'skewsymmetric.c' || echo './'`skewsymmetric.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/fluid.h:23,
                 from ../src/boundary.h:23,
                 from ../src/domain.h:23,
                 from ../src/simulation.h:27,
                 from skewsymmetric.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
skewsymmetric.c: In function 'gfs_skew_symmetric_run':
skewsymmetric.c:591:23: warning: variable 'res' set but not used [-Wunused-but-set-variable]
   GfsVariable * p,  * res = NULL, * gmac[FTT_DIMENSION];
                       ^~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libskewsymmetric3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libskewsymmetric3D_la-skewsymmetric.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics2D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/solid.h:23,
                 from topics.c:21:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from ../src/timestep.h:29:0,
                 from ../src/simulation.h:28,
                 from ../src/event.h:53,
                 from ../src/solid.h:26,
                 from topics.c:21:
topics.c: In function 'print_interface':
topics.c:1139:38: warning: array subscript is above array bounds [-Warray-bounds]
     double nz = GFS_VALUE(cell, tv->m[2]);
../src/variable.h:76:74: note: in definition of macro 'GFS_VALUE'
 #define GFS_VALUE(cell,v)            ((&GFS_STATE (cell)->place_holder)[(v)->i])
                                                                          ^
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtopics2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics2D_la-topics.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtopics3D_la-topics.lo `test -f 'topics.c' || echo './'`topics.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/solid.h:23,
                 from topics.c:21:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtopics3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtopics3D_la-topics.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libculvert2D_la-culvert.lo `test -f 'culvert.c' || echo './'`culvert.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from ../src/source.h:27,
                 from ../src/river.h:27,
                 from culvert.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libculvert2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libculvert2D_la-culvert.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lculvert -lboyd87 -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o liblayered2D_la-layered.lo `test -f 'layered.c' || echo './'`layered.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/fluid.h:23,
                 from ../src/boundary.h:23,
                 from ../src/domain.h:23,
                 from ../src/simulation.h:27,
                 from layered.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o liblayered2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris liblayered2D_la-layered.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide2D_la-tide.lo `test -f 'tide.c' || echo './'`tide.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/string.h:26,
                 from tide.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtide2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide2D_la-tide.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libtide3D_la-tide.lo `test -f 'tide.c' || echo './'`tide.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/string.h:26,
                 from tide.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libtide3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libtide3D_la-tide.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -Lfes2004 -lfes -lnetcdf -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes2D_la-stokes.lo `test -f 'stokes.c' || echo './'`stokes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from stokes.c:19:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=F77   --mode=compile f77  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -c -o CW263.lo CW263.f
/bin/bash ../libtool --silent  --tag=F77   --mode=link f77  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libstokes2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes2D_la-stokes.lo CW263.lo ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libstokes3D_la-stokes.lo `test -f 'stokes.c' || echo './'`stokes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from stokes.c:19:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=F77   --mode=link f77  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libstokes3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libstokes3D_la-stokes.lo CW263.lo ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles2D_la-bubbles.lo `test -f 'bubbles.c' || echo './'`bubbles.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from ../src/particle.h:27,
                 from particulatecommon.h:20,
                 from bubbles.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
bubbles.c: In function 'bubble_fraction_init':
bubbles.c:421:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
   GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles;
                                                ^
bubbles.c: In function 'bubble_fraction_dt_init':
bubbles.c:474:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
   GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles;
                                                ^
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -I/usr/include -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libbubbles2D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles2D_la-bubbles.lo libparticulatecommon2D.la ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
/bin/bash ../libtool --silent  --tag=CC   --mode=compile mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o libbubbles3D_la-bubbles.lo `test -f 'bubbles.c' || echo './'`bubbles.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from /usr/include/gts.h:23,
                 from ../src/event.h:27,
                 from ../src/particle.h:27,
                 from particulatecommon.h:20,
                 from bubbles.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
bubbles.c: In function 'bubble_fraction_init':
bubbles.c:421:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
   GFS_PARTICULATE_FIELD (v)->voidfraction_func = voidfraction_from_bubbles;
                                                ^
bubbles.c: In function 'bubble_fraction_dt_init':
bubbles.c:474:48: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types]
   GFS_PARTICULATE_FIELD (o)->voidfraction_func = dVpdt_from_particles;
                                                ^
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -I/usr/include -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o libbubbles3D.la -rpath /usr/lib/arm-linux-gnueabihf/gerris libbubbles3D_la-bubbles.lo libparticulatecommon3D.la ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lm 
ar: `u' modifier ignored since `D' is the default (see `U')
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface2kdt.o `test -f 'rsurface2kdt.c' || echo './'`rsurface2kdt.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from rsurface2kdt.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-modules\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DGFS_MODULES_DIR=\"/usr/lib/arm-linux-gnueabihf/gerris\" -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o rsurface2kdt-rsurface.o `test -f 'rsurface.c' || echo './'`rsurface.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdio.h:27,
                 from rsurface.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
In file included from rsurface.c:5:0:
rsurface.h:16:1: warning: no semicolon at end of struct or union
 } RSurfaceSum;
 ^
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -no-undefined -version-info 2:0:0 -release 1.3 -export-dynamic -module -Wl,-z,relro -Wl,-z,now -o rsurface2kdt rsurface2kdt-rsurface2kdt.o rsurface2kdt-rsurface.o -LRStarTree -lcSmRST -Lkdt -lkdt -lm 
libtool: warning: '-version-info' is ignored for programs
libtool: warning: '-release' is ignored for programs
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making all in tools
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl2D-gfs2oogl.o `test -f 'gfs2oogl.c' || echo './'`gfs2oogl.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from gfs2oogl.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
gfs2oogl.c: In function 'main':
gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations]
       streamname = g_strdup (g_basename (optarg));
       ^~~~~~~~~~
In file included from /usr/include/glib-2.0/glib.h:48:0,
                 from /usr/include/gts.h:24,
                 from ../src/init.h:23,
                 from gfs2oogl.c:31:
/usr/include/glib-2.0/glib/gfileutils.h:163:14: note: declared here
 const gchar *g_basename         (const gchar *file_name);
              ^~~~~~~~~~
gfs2oogl.c:706:28: warning: variable 'lines' set but not used [-Wunused-but-set-variable]
   gboolean ribbon = FALSE, lines = FALSE, squares = FALSE;
                            ^~~~~
gfs2oogl.c:706:12: warning: variable 'ribbon' set but not used [-Wunused-but-set-variable]
   gboolean ribbon = FALSE, lines = FALSE, squares = FALSE;
            ^~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfs2oogl2D gfs2oogl2D-gfs2oogl.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfs2oogl.o gfs2oogl.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from gfs2oogl.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
gfs2oogl.c: In function 'main':
gfs2oogl.c:891:7: warning: 'g_basename' is deprecated: Use 'g_path_get_basename' instead [-Wdeprecated-declarations]
       streamname = g_strdup (g_basename (optarg));
       ^~~~~~~~~~
In file included from /usr/include/glib-2.0/glib.h:48:0,
                 from /usr/include/gts.h:24,
                 from ../src/init.h:23,
                 from gfs2oogl.c:31:
/usr/include/glib-2.0/glib/gfileutils.h:163:14: note: declared here
 const gchar *g_basename         (const gchar *file_name);
              ^~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfs2oogl3D gfs2oogl.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o streamanime.o streamanime.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from streamanime.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o streamanime streamanime.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o ppmcombine-ppmcombine.o `test -f 'ppmcombine.c' || echo './'`ppmcombine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from ppmcombine.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
ppmcombine.c: In function 'main':
ppmcombine.c:36:12: warning: variable 'verbose' set but not used [-Wunused-but-set-variable]
   gboolean verbose = FALSE;
            ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o ppmcombine ppmcombine-ppmcombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare2D-gfscompare.o `test -f 'gfscompare.c' || echo './'`gfscompare.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from gfscompare.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
gfscompare.c: In function 'main':
gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable]
   gboolean no_check = FALSE;
            ^~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfscompare2D gfscompare2D-gfscompare.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscompare.o gfscompare.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from gfscompare.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
gfscompare.c: In function 'main':
gfscompare.c:319:12: warning: variable 'no_check' set but not used [-Wunused-but-set-variable]
   gboolean no_check = FALSE;
            ^~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfscompare3D gfscompare.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine2D-gfscombine.o `test -f 'gfscombine.c' || echo './'`gfscombine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from gfscombine.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfscombine2D gfscombine2D-gfscombine.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfscombine.o gfscombine.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/math.h:27,
                 from gfscombine.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfscombine3D gfscombine.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2D-gfsjoin2.o `test -f 'gfsjoin2.c' || echo './'`gfsjoin2.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from gfsjoin2.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfsjoin2D gfsjoin2D-gfsjoin2.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o gfsjoin2.o gfsjoin2.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from gfsjoin2.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o gfsjoin3D gfsjoin2.o ../src/libgfs3D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include  -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o shapes.o shapes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/stdlib.h:25,
                 from shapes.c:20:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
shapes.c:288:13: warning: 'surface_add_rectangular_channel_shape' defined but not used [-Wunused-function]
 static void surface_add_rectangular_channel_shape (GtsSurface * s,
             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o shapes shapes.o -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
Making all in test
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
Making all in doc
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
ls ../src/*.[ch] | awk 'BEGIN{print "reference: \\"}{ print "\t" $1 " \\"}' > Makefile.deps
Making all in tutorial
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
awk -f depend.awk file="tutorial" < tutorial.tex > Makefile.deps
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
Making all in examples
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-classes.o `test -f 'classes.c' || echo './'`classes.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/string.h:26,
                 from classes.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o classes-init.o `test -f '../../src/init.c' || echo './'`../../src/init.c
../../src/init.c:33:0: warning: "_GNU_SOURCE" redefined
 # define _GNU_SOURCE
 
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/fenv.h:26,
                 from ../../src/init.c:34:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o classes classes-classes.o classes-init.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
mpicc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o modules-modules.o `test -f 'modules.c' || echo './'`modules.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/limits.h:26,
                 from /usr/lib/gcc/arm-linux-gnueabihf/7/include-fixed/limits.h:194,
                 from /usr/lib/gcc/arm-linux-gnueabihf/7/include-fixed/syslimits.h:7,
                 from /usr/lib/gcc/arm-linux-gnueabihf/7/include-fixed/limits.h:34,
                 from /usr/lib/arm-linux-gnueabihf/glib-2.0/include/glibconfig.h:11,
                 from /usr/include/glib-2.0/glib/gtypes.h:32,
                 from /usr/include/glib-2.0/glib/galloca.h:32,
                 from /usr/include/glib-2.0/glib.h:30,
                 from /usr/include/glib-2.0/gmodule.h:28,
                 from modules.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o modules modules-modules.o ../../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
./modules ../../modules/*.la /usr/lib/arm-linux-gnueabihf/gerris/*.so | LC_ALL=C sort | uniq > modules.list
(./classes && sh ./modulesyms.sh ../../modules /usr/lib/arm-linux-gnueabihf/gerris) | LC_ALL=C sort > gerris.dic
echo "# Language file for source-highlight" > gfs.lang
echo "# Generated automatically by classes.c" >> gfs.lang
awk '{ printf ("classname = \"%s\"\n", $1) }' < gerris.dic >> gfs.lang
echo "include \"/usr/share/source-highlight/cpp.lang\"" >> gfs.lang
echo "comment start \"#\"" >> gfs.lang
echo "redef preproc = \"C preprocessor command is not compatible with the use of # as comment character in GTS\"" >> gfs.lang
echo "(defvar gfs-abbrevs '(" > gfs-keywords.el
awk '{ printf ("\"%s\"\n", $1) }' < gerris.dic >> gfs-keywords.el
echo ")" >> gfs-keywords.el
echo "\"Gerris keywords automatically generated by classes.c.\")" >> gfs-keywords.el
echo "(defvar gfs-modules '(" >> gfs-keywords.el
awk '{ printf ("\"%s\"\n", $1) }' < modules.list >> gfs-keywords.el
echo ")" >> gfs-keywords.el
echo "\"Gerris modules automatically generated by modules.c.\")" >> gfs-keywords.el
echo "(provide 'gfs-keywords)" >> gfs-keywords.el
sh ./gfs.php.sh > gfs.php
make  all-am
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[5]: Nothing to be done for 'all-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
Making all in manpages
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Nothing to be done for 'all'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-autoclass.o `test -f 'autoclass.c' || echo './'`autoclass.c
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/string.h:26,
                 from autoclass.c:1:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
autoclass.c: In function 'main':
autoclass.c:6:21: warning: variable 'klass' set but not used [-Wunused-but-set-variable]
   GtsObjectClass ** klass;
                     ^~~~~
mpicc -DHAVE_CONFIG_H -I. -I.. -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -I/usr/include -DG_LOG_DOMAIN=\"Gfs-tools\" -pthread -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I../src -Wdate-time -D_FORTIFY_SOURCE=2  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99 -c -o autoclass-init.o `test -f '../src/init.c' || echo './'`../src/init.c
../src/init.c:33:0: warning: "_GNU_SOURCE" redefined
 # define _GNU_SOURCE
 
<command-line>:0:0: note: this is the location of the previous definition
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33:0,
                 from /usr/include/fenv.h:26,
                 from ../src/init.c:34:
/usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
 # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
   ^~~~~~~
/bin/bash ../libtool --silent  --tag=CC   --mode=link mpicc  -DFTT_2D=1 -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/gerris-20131206+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -D_XOPEN_SOURCE=700 -D_BSD_SOURCE -D_GNU_SOURCE -Wall -Werror-implicit-function-declaration -Wmissing-prototypes -Wmissing-declarations -pipe -std=c99  -Wl,-z,relro -Wl,-z,now -o autoclass autoclass-autoclass.o autoclass-init.o ../src/libgfs2D.la -lgts -lm -lgthread-2.0 -pthread -Wl,--export-dynamic -lgmodule-2.0 -pthread -lglib-2.0 
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
Making all in desktop
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
Making all in debian
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[2]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
   dh_auto_test -a
   create-stamp debian/debhelper-build-stamp
 fakeroot debian/rules binary-arch
dh binary-arch
   dh_testroot -a
   dh_prep -a
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_auto_install
	make -j1 install DESTDIR=/<<BUILDDIR>>/gerris-20131206\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
Making install in src
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make  install-am
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
 /bin/bash ../libtool --silent   --mode=install /usr/bin/install -c   libgfs2D.la libgfs3D.la '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
  /bin/bash ../libtool --silent   --mode=install /usr/bin/install -c gerris2D gerris3D '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include'
 /usr/bin/install -c -m 644 gfs.h '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
 /usr/bin/install -c -m 644 gerris2D.pc gerris3D.pc '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/pkgconfig'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
 /usr/bin/install -c -m 644 m4.awk '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include/gerris'
 /usr/bin/install -c -m 644 ftt.h fluid.h variable.h output.h solid.h poisson.h advection.h boundary.h mpi_boundary.h timestep.h domain.h init.h refine.h event.h simulation.h graphic.h adaptive.h source.h tension.h vof.h utils.h ocean.h wave.h levelset.h isocube.h cartesian.h surface.h unstructured.h map.h river.h moving.h balance.h metric.h particle.h version.h spatial.h function.h '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/include/gerris'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/src'
Making install in modules
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making install in RStarTree
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/RStarTree'
Making install in kdt
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
  /bin/bash ../../libtool --silent   --mode=install /usr/bin/install -c xyz2kdt kdt2kdt kdtquery '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/kdt'
Making install in fes2004
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/fes2004'
Making install in wavewatch
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/wavewatch'
Making install in culvert
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules/culvert'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
  /bin/bash ../libtool --silent   --mode=install /usr/bin/install -c rsurface2kdt '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris'
 /bin/bash ../libtool --silent   --mode=install /usr/bin/install -c   libterrain2D.la libterrain3D.la libparticulates2D.la libparticulates3D.la libokada2D.la libokada3D.la libdf33D.la libelectrohydro2D.la libelectrohydro3D.la libskewsymmetric2D.la libskewsymmetric3D.la libtopics2D.la libtopics3D.la libculvert2D.la liblayered2D.la libtide2D.la libtide3D.la libstokes2D.la libstokes3D.la libbubbles2D.la libbubbles3D.la '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/gerris'
libtool: warning: relinking 'libterrain2D.la'
libtool: warning: relinking 'libterrain3D.la'
libtool: warning: relinking 'libparticulates2D.la'
libtool: warning: relinking 'libparticulates3D.la'
libtool: warning: relinking 'libokada2D.la'
libtool: warning: relinking 'libokada3D.la'
libtool: warning: relinking 'libdf33D.la'
libtool: warning: relinking 'libelectrohydro2D.la'
libtool: warning: relinking 'libelectrohydro3D.la'
libtool: warning: relinking 'libskewsymmetric2D.la'
libtool: warning: relinking 'libskewsymmetric3D.la'
libtool: warning: relinking 'libtopics2D.la'
libtool: warning: relinking 'libtopics3D.la'
libtool: warning: relinking 'libculvert2D.la'
libtool: warning: relinking 'liblayered2D.la'
libtool: warning: relinking 'libtide2D.la'
libtool: warning: relinking 'libtide3D.la'
libtool: warning: relinking 'libstokes2D.la'
libtool: warning: relinking 'libstokes3D.la'
libtool: warning: relinking 'libbubbles2D.la'
libtool: warning: relinking 'libbubbles3D.la'
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf/gerris'
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/modules'
Making install in tools
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
  /bin/bash ../libtool --silent   --mode=install /usr/bin/install -c gfs2oogl2D gfs2oogl3D streamanime ppmcombine gfscompare2D gfscompare3D gfscombine2D gfscombine3D gfsjoin2D gfsjoin3D shapes '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs2D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
libtool: warning: '../src/libgfs3D.la' has not been installed in '/usr/lib/arm-linux-gnueabihf'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
 /usr/bin/install -c darcs2dist bat2gts ppm2mpeg ppm2theora ppm2video gfs2gfs gfsjoin gfsplot '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/tools'
Making install in test
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/test'
Making install in doc
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
Making install in tutorial
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/tutorial'
Making install in examples
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make  install-am
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[6]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
 /usr/bin/install -c gfs2doc gfs-highlight gfsxref '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
 /usr/bin/install -c -m 644 gfs2tex.py gfs.lang gerris.dic gfs-keywords.el gfs-mode.el gfs.sty gfs.hva kaltura.sh gfs.php '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
make[6]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/examples'
Making install in manpages
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[5]: Nothing to be done for 'install-exec-am'.
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1'
 /usr/bin/install -c -m 644 bat2gts.1 gerris2D.1 gerris3D.1 gfs2gfs.1 gfs2oogl2D.1 gfs2oogl3D.1 gfscompare2D.1 gfscompare3D.1 gfs-config.1 gfs-highlight.1 gfsjoin.1 gfsxref.1 ppm2mpeg.1 ppmcombine.1 rsurfacequery.1 rsurfaceinfo.1 shapes.1 streamanime.1 xyz2rsurface.1 gfsjoin2D.1 gfsjoin3D.1 '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/man/man1'
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc/manpages'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[5]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/doc'
Making install in desktop
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[4]: Nothing to be done for 'install-exec-am'.
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes'
 /usr/bin/install -c -m 644 application-gerris.png application-gerris-2D.png application-gerris-3D.png application-gerris-compressed.png '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/icons/hicolor/48x48/mimetypes'
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages'
 /usr/bin/install -c -m 644 gerris.xml '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/mime/packages'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/desktop'
Making install in debian
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg/debian'
make[3]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[4]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[4]: Nothing to be done for 'install-exec-am'.
 /bin/mkdir -p '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
 /usr/bin/install -c build_function libtool '/<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris'
make[4]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[3]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
make[2]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
find /<<BUILDDIR>>/gerris-20131206+dfsg/debian/ -name "*.la" | xargs rm -f
sed -i -e "s/mpicc/gcc/g" /<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/share/gerris/build_function
rm -rf /<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin/darcs2dist
rm -rf /<<BUILDDIR>>/gerris-20131206+dfsg/debian/tmp/usr/bin/gfs2doc
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
   dh_install -a
   dh_installdocs -a
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
dh_installchangelogs ChangeLog
make[1]: Leaving directory '/<<BUILDDIR>>/gerris-20131206+dfsg'
   dh_installman -a
   dh_lintian -a
   dh_icons -a
   dh_perl -a
   dh_link -a
   dh_strip_nondeterminism -a
   dh_compress -a
   dh_fixperms -a
   dh_missing -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris/usr/bin/gfsjoin2D debian/gerris/usr/bin/gfscompare2D debian/gerris/usr/bin/gfscombine2D debian/gerris/usr/bin/gfscompare3D debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 debian/gerris/usr/bin/streamanime debian/gerris/usr/bin/gfs2oogl3D debian/gerris/usr/bin/gerris2D debian/gerris/usr/bin/gfs2oogl2D debian/gerris/usr/bin/ppmcombine debian/gerris/usr/bin/gerris3D debian/gerris/usr/bin/gfscombine3D debian/gerris/usr/bin/gfsjoin3D debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 debian/gerris/usr/bin/shapes were not linked against libgmodule-2.0.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris/usr/bin/gfsjoin2D debian/gerris/usr/bin/gfscompare2D debian/gerris/usr/bin/gfscombine2D debian/gerris/usr/bin/gfscompare3D debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 debian/gerris/usr/bin/streamanime debian/gerris/usr/bin/gfs2oogl3D debian/gerris/usr/bin/gerris2D debian/gerris/usr/bin/gfs2oogl2D debian/gerris/usr/bin/ppmcombine debian/gerris/usr/bin/gerris3D debian/gerris/usr/bin/gfscombine3D debian/gerris/usr/bin/gfsjoin3D debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 debian/gerris/usr/bin/shapes were not linked against libgthread-2.0.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0 debian/gerris/usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0 were not linked against libgcc_s.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libgfs-1.3-2/usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2.0.0 debian/libgfs-1.3-2/usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2.0.0 were not linked against libgthread-2.0.so.0 (they use none of the library's symbols)
   dh_installdeb -a
   dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package libgfs-dev: unknown substitution variable ${shlibs:Depends}
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package 'gerris' in '../gerris_20131206+dfsg-18+b10_armhf.deb'.
dpkg-deb: building package 'gerris-dbgsym' in '../gerris-dbgsym_20131206+dfsg-18+b10_armhf.deb'.
dpkg-deb: building package 'libgfs-1.3-2' in '../libgfs-1.3-2_20131206+dfsg-18+b10_armhf.deb'.
dpkg-deb: building package 'libgfs-1.3-2-dbgsym' in '../libgfs-1.3-2-dbgsym_20131206+dfsg-18+b10_armhf.deb'.
dpkg-deb: building package 'libgfs-dev' in '../libgfs-dev_20131206+dfsg-18+b10_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../gerris_20131206+dfsg-18+b10_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build gerris-20131206+dfsg
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2018-03-23T12:49:54Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


gerris_20131206+dfsg-18+b10_armhf.changes:
------------------------------------------

Format: 1.8
Date: Thu, 23 Nov 2017 21:50:59 +0100
Source: gerris (20131206+dfsg-18)
Binary: gerris libgfs-1.3-2 libgfs-dev
Binary-Only: yes
Architecture: armhf
Version: 20131206+dfsg-18+b10
Distribution: buster-staging
Urgency: low
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Description:
 gerris     - Fluid Flow Solver
 libgfs-1.3-2 - Fluid Flow Solver -- shared libraries
 libgfs-dev - Fluid Flow Solver -- development libraries and headers
Changes:
 gerris (20131206+dfsg-18+b10) buster-staging; urgency=low, binary-only=yes
 .
   * Binary-only non-maintainer upload for armhf; no source changes.
   * rebuild due to debcheck failure
Checksums-Sha1:
 2c2d455f84308824af99f1c353bcbd1339b8643d 418220 gerris-dbgsym_20131206+dfsg-18+b10_armhf.deb
 17d1aac64d0c5f8f10249d727b2ae713b6223862 8761 gerris_20131206+dfsg-18+b10_armhf.buildinfo
 e5e8b8c1631e4ed8fce3ecd36378e74b2ba618b1 280496 gerris_20131206+dfsg-18+b10_armhf.deb
 0c68fdff66775e0539d01ed1f5b6043f47d221ef 1938696 libgfs-1.3-2-dbgsym_20131206+dfsg-18+b10_armhf.deb
 758072cfef55b371d810774f456cfa1b809b9ac7 469600 libgfs-1.3-2_20131206+dfsg-18+b10_armhf.deb
 0569f31c82f31891e363cd69686188224dbf4d39 103848 libgfs-dev_20131206+dfsg-18+b10_armhf.deb
Checksums-Sha256:
 ffe7a5c4b1a5ca6bb7e6928005030dc3533a5e78c2fc145783c4604f3c76e9ed 418220 gerris-dbgsym_20131206+dfsg-18+b10_armhf.deb
 db38ac04d71a81c1576e62e7c47ee845008968b5eb1781f7ccbae6358fa757f2 8761 gerris_20131206+dfsg-18+b10_armhf.buildinfo
 14fb0531afb522eeea4a9ed0bba3bc27e5a49c654b2ad5863153a4bfc46b2813 280496 gerris_20131206+dfsg-18+b10_armhf.deb
 3a605b2065cfc315bb12e5f31b1a6b5c4473f8d1a3e43f245e06929305baaac4 1938696 libgfs-1.3-2-dbgsym_20131206+dfsg-18+b10_armhf.deb
 c60fcfc98c3f255202e198524a815a62956f1e13e82fb5034831e13b2949a640 469600 libgfs-1.3-2_20131206+dfsg-18+b10_armhf.deb
 ef3ca23135cc3357414f8710d58c75ab960702a226218b501a9803580b7b0013 103848 libgfs-dev_20131206+dfsg-18+b10_armhf.deb
Files:
 03643fdcf59e126c5ca393bf94efe37f 418220 debug optional gerris-dbgsym_20131206+dfsg-18+b10_armhf.deb
 7584d8a01e83dceb99073517dc2009c5 8761 science optional gerris_20131206+dfsg-18+b10_armhf.buildinfo
 2f33e13155594c2c16ee3cfd1c1953a1 280496 science optional gerris_20131206+dfsg-18+b10_armhf.deb
 22c29ca40dee970c5b230b8b9adf2423 1938696 debug optional libgfs-1.3-2-dbgsym_20131206+dfsg-18+b10_armhf.deb
 925dcd7b38968f4582fb6f2cfbea739a 469600 devel optional libgfs-1.3-2_20131206+dfsg-18+b10_armhf.deb
 a236c5764b661b2ddc584ebbe3883c92 103848 libdevel optional libgfs-dev_20131206+dfsg-18+b10_armhf.deb

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


gerris-dbgsym_20131206+dfsg-18+b10_armhf.deb
--------------------------------------------

 new Debian package, version 2.0.
 size 418220 bytes: control archive=1428 bytes.
    1156 bytes,    12 lines      control              
    2014 bytes,    19 lines      md5sums              
 Package: gerris-dbgsym
 Source: gerris (20131206+dfsg-18)
 Version: 20131206+dfsg-18+b10
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
 Installed-Size: 581
 Depends: gerris (= 20131206+dfsg-18+b10)
 Section: debug
 Priority: optional
 Description: debug symbols for gerris
 Build-Ids: 05365a1bc54815f8651ae4f8b7458d0c86dd2229 13257922db0ed1862aac064910423b75922f7f18 1a406c30adbb04897c8ca1661aec657c9130ac4c 2c481e2385c2eebf021c423a404109ec8b385968 4346031cfbf134caa547a5eb87655d9496fb8efc 5873258c63e02543b78b29854d4ee8b2e054bebb 5978431a440f89d01b00611b01119522d54e1d4d 63ebce518a7d2a8a0ced9dde7a80d3d6fcad33ca 725fe59fd05c92fc407fca8d398680360c91e9b1 7934a10aa480384f403414910bd86f6a99f9b321 80053464420586d2449355b3fbac2d0ada29171d 8ca65ce0625cf4262d711645817a029beae2fb6d 99c6c74f2ff1797c3914fdd5ad428d45132e6805 bf9daba0aa7c22c840fcefad7fad6d4daede8e97 ce53fa2471ba9796a32e2819b600615624a8f862 d53d85304400c009540227177646ee8d35f64634 e25bcc47c26e9f866efb64d1392cafbd7eeeffff eb53ab4312ad4c774dc08e9c596ca5e0bc752126 f894b738f915b27b9c420a927a62baa8bb91af59

drwxr-xr-x root/root         0 2017-11-23 20:50 ./
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/05/
-rw-r--r-- root/root     34460 2017-11-23 20:50 ./usr/lib/debug/.build-id/05/365a1bc54815f8651ae4f8b7458d0c86dd2229.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/13/
-rw-r--r-- root/root     21468 2017-11-23 20:50 ./usr/lib/debug/.build-id/13/257922db0ed1862aac064910423b75922f7f18.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/1a/
-rw-r--r-- root/root     13924 2017-11-23 20:50 ./usr/lib/debug/.build-id/1a/406c30adbb04897c8ca1661aec657c9130ac4c.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/2c/
-rw-r--r-- root/root     29804 2017-11-23 20:50 ./usr/lib/debug/.build-id/2c/481e2385c2eebf021c423a404109ec8b385968.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/43/
-rw-r--r-- root/root     22204 2017-11-23 20:50 ./usr/lib/debug/.build-id/43/46031cfbf134caa547a5eb87655d9496fb8efc.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/58/
-rw-r--r-- root/root     40876 2017-11-23 20:50 ./usr/lib/debug/.build-id/58/73258c63e02543b78b29854d4ee8b2e054bebb.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/59/
-rw-r--r-- root/root     29304 2017-11-23 20:50 ./usr/lib/debug/.build-id/59/78431a440f89d01b00611b01119522d54e1d4d.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/63/
-rw-r--r-- root/root     26844 2017-11-23 20:50 ./usr/lib/debug/.build-id/63/ebce518a7d2a8a0ced9dde7a80d3d6fcad33ca.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/72/
-rw-r--r-- root/root     79916 2017-11-23 20:50 ./usr/lib/debug/.build-id/72/5fe59fd05c92fc407fca8d398680360c91e9b1.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/79/
-rw-r--r-- root/root     26980 2017-11-23 20:50 ./usr/lib/debug/.build-id/79/34a10aa480384f403414910bd86f6a99f9b321.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/80/
-rw-r--r-- root/root     21448 2017-11-23 20:50 ./usr/lib/debug/.build-id/80/053464420586d2449355b3fbac2d0ada29171d.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/8c/
-rw-r--r-- root/root     25916 2017-11-23 20:50 ./usr/lib/debug/.build-id/8c/a65ce0625cf4262d711645817a029beae2fb6d.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/99/
-rw-r--r-- root/root     20248 2017-11-23 20:50 ./usr/lib/debug/.build-id/99/c6c74f2ff1797c3914fdd5ad428d45132e6805.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/bf/
-rw-r--r-- root/root     26948 2017-11-23 20:50 ./usr/lib/debug/.build-id/bf/9daba0aa7c22c840fcefad7fad6d4daede8e97.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/ce/
-rw-r--r-- root/root     40580 2017-11-23 20:50 ./usr/lib/debug/.build-id/ce/53fa2471ba9796a32e2819b600615624a8f862.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/d5/
-rw-r--r-- root/root     20284 2017-11-23 20:50 ./usr/lib/debug/.build-id/d5/3d85304400c009540227177646ee8d35f64634.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/e2/
-rw-r--r-- root/root     34480 2017-11-23 20:50 ./usr/lib/debug/.build-id/e2/5bcc47c26e9f866efb64d1392cafbd7eeeffff.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/eb/
-rw-r--r-- root/root     30456 2017-11-23 20:50 ./usr/lib/debug/.build-id/eb/53ab4312ad4c774dc08e9c596ca5e0bc752126.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/f8/
-rw-r--r-- root/root     11428 2017-11-23 20:50 ./usr/lib/debug/.build-id/f8/94b738f915b27b9c420a927a62baa8bb91af59.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/doc/
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/share/doc/gerris-dbgsym -> gerris


gerris_20131206+dfsg-18+b10_armhf.deb
-------------------------------------

 new Debian package, version 2.0.
 size 280496 bytes: control archive=3032 bytes.
    1319 bytes,    32 lines      control              
    4615 bytes,    72 lines      md5sums              
      50 bytes,     2 lines      shlibs               
      67 bytes,     2 lines      triggers             
 Package: gerris
 Source: gerris (20131206+dfsg-18)
 Version: 20131206+dfsg-18+b10
 Architecture: armhf
 Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
 Installed-Size: 1001
 Depends: gcc, libc6 (>= 2.27), libgcc1 (>= 1:3.0), libgfortran4 (>= 7), libgfs-1.3-2, libglib2.0-0 (>= 2.12.0), libgts-0.7-5 (>= 0.7.6), libopenmpi2
 Recommends: gfsview
 Suggests: python
 Breaks: gerris-mpi (<< 20131206+dfsg-7)
 Replaces: gerris-mpi (<< 20131206+dfsg-7)
 Section: science
 Priority: optional
 Homepage: http://gfs.sourceforge.net/
 Description: Fluid Flow Solver
  Gerris is a system for the solution of the partial differential
  equations describing fluid flow.
  .
  A brief summary of its main (current) features:
  .
    * Solves the time-dependent incompressible variable-density Euler,
      Stokes or Navier-Stokes equations
    * Adaptive mesh refinement: the resolution is adapted dynamically to
      the features of the flow
    * Entirely automatic mesh generation in complex geometries
    * Second-order in space and time
    * Unlimited number of advected/diffused passive tracers
    * Flexible specification of additional source terms
    * Portable parallel support using the MPI library
    * Volume of Fluid advection scheme for interfacial flows
  .
  This package has MPI support built in.

drwxr-xr-x root/root         0 2017-11-23 20:50 ./
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/bin/
-rwxr-xr-x root/root      3218 2017-11-23 20:50 ./usr/bin/bat2gts
-rwxr-xr-x root/root     18116 2017-11-23 20:50 ./usr/bin/gerris2D
-rwxr-xr-x root/root     18116 2017-11-23 20:50 ./usr/bin/gerris3D
-rwxr-xr-x root/root      1967 2017-11-23 20:50 ./usr/bin/gfs-highlight
-rwxr-xr-x root/root       551 2017-11-23 20:50 ./usr/bin/gfs2gfs
-rwxr-xr-x root/root     26516 2017-11-23 20:50 ./usr/bin/gfs2oogl2D
-rwxr-xr-x root/root     30612 2017-11-23 20:50 ./usr/bin/gfs2oogl3D
-rwxr-xr-x root/root      9732 2017-11-23 20:50 ./usr/bin/gfscombine2D
-rwxr-xr-x root/root      9732 2017-11-23 20:50 ./usr/bin/gfscombine3D
-rwxr-xr-x root/root     18212 2017-11-23 20:50 ./usr/bin/gfscompare2D
-rwxr-xr-x root/root     18180 2017-11-23 20:50 ./usr/bin/gfscompare3D
-rwxr-xr-x root/root      5034 2017-11-23 20:50 ./usr/bin/gfsjoin
-rwxr-xr-x root/root      9748 2017-11-23 20:50 ./usr/bin/gfsjoin2D
-rwxr-xr-x root/root      9748 2017-11-23 20:50 ./usr/bin/gfsjoin3D
-rwxr-xr-x root/root      1264 2017-11-23 20:50 ./usr/bin/gfsplot
-rwxr-xr-x root/root      1732 2017-11-23 20:50 ./usr/bin/gfsxref
-rwxr-xr-x root/root     22036 2017-11-23 20:50 ./usr/bin/kdt2kdt
-rwxr-xr-x root/root     17876 2017-11-23 20:50 ./usr/bin/kdtquery
-rwxr-xr-x root/root       506 2017-11-23 20:50 ./usr/bin/ppm2mpeg
-rwxr-xr-x root/root       505 2017-11-23 20:50 ./usr/bin/ppm2theora
-rwxr-xr-x root/root       468 2017-11-23 20:50 ./usr/bin/ppm2video
-rwxr-xr-x root/root      5636 2017-11-23 20:50 ./usr/bin/ppmcombine
-rwxr-xr-x root/root     62996 2017-11-23 20:50 ./usr/bin/rsurface2kdt
-rwxr-xr-x root/root     18004 2017-11-23 20:50 ./usr/bin/shapes
-rwxr-xr-x root/root      9732 2017-11-23 20:50 ./usr/bin/streamanime
-rwxr-xr-x root/root     22036 2017-11-23 20:50 ./usr/bin/xyz2kdt
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/gerris/
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2 -> libstokes2D-1.3.so.2.0.0
-rw-r--r-- root/root     30020 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D-1.3.so.2.0.0
-rw-r--r-- root/root     26532 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.a
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes2D.so -> libstokes2D-1.3.so.2.0.0
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2 -> libstokes3D-1.3.so.2.0.0
-rw-r--r-- root/root     30020 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D-1.3.so.2.0.0
-rw-r--r-- root/root     26532 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.a
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/gerris/libstokes3D.so -> libstokes3D-1.3.so.2.0.0
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/gerris/
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/gerris/gfs2tex.py -> ../../share/gerris/gfs2tex.py
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/gerris/m4.awk -> ../../share/gerris/m4.awk
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/doc/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/doc/gerris/
-rw-r--r-- root/root       930 2013-12-06 15:51 ./usr/share/doc/gerris/AUTHORS
-rw-r--r-- root/root      4362 2013-12-06 15:51 ./usr/share/doc/gerris/NEWS.gz
-rw-r--r-- root/root       665 2013-12-06 15:51 ./usr/share/doc/gerris/README
-rw-r--r-- root/root       277 2013-12-06 15:51 ./usr/share/doc/gerris/THANKS
-rw-r--r-- root/root      1405 2013-12-06 15:51 ./usr/share/doc/gerris/TODO
-rw-r--r-- root/root       228 2017-11-23 20:50 ./usr/share/doc/gerris/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4622 2017-11-23 20:50 ./usr/share/doc/gerris/changelog.Debian.gz
-rw-r--r-- root/root     66168 2013-12-06 15:56 ./usr/share/doc/gerris/changelog.gz
-rw-r--r-- root/root      1933 2016-09-26 18:35 ./usr/share/doc/gerris/copyright
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/gerris/
-rwxr-xr-x root/root       851 2017-11-23 20:50 ./usr/share/gerris/build_function
-rw-r--r-- root/root      5521 2017-11-23 20:50 ./usr/share/gerris/gerris.dic
-rw-r--r-- root/root      6565 2017-11-23 20:50 ./usr/share/gerris/gfs-keywords.el
-rw-r--r-- root/root      4732 2017-11-23 20:50 ./usr/share/gerris/gfs-mode.el
-rw-r--r-- root/root       545 2017-11-23 20:50 ./usr/share/gerris/gfs.hva
-rw-r--r-- root/root     10891 2017-11-23 20:50 ./usr/share/gerris/gfs.lang
-rw-r--r-- root/root     10685 2017-11-23 20:50 ./usr/share/gerris/gfs.php
-rw-r--r-- root/root       210 2017-11-23 20:50 ./usr/share/gerris/gfs.sty
-rw-r--r-- root/root      7148 2017-11-23 20:50 ./usr/share/gerris/gfs2tex.py
-rw-r--r-- root/root       387 2017-11-23 20:50 ./usr/share/gerris/kaltura.sh
-rwxr-xr-x root/root    349010 2017-11-23 20:50 ./usr/share/gerris/libtool
-rw-r--r-- root/root       934 2017-11-23 20:50 ./usr/share/gerris/m4.awk
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/icons/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/icons/hicolor/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/icons/hicolor/48x48/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/icons/hicolor/48x48/mimetypes/
-rw-r--r-- root/root      3542 2017-11-23 20:50 ./usr/share/icons/hicolor/48x48/mimetypes/application-gerris-2D.png
-rw-r--r-- root/root      3538 2017-11-23 20:50 ./usr/share/icons/hicolor/48x48/mimetypes/application-gerris-3D.png
-rw-r--r-- root/root      3627 2017-11-23 20:50 ./usr/share/icons/hicolor/48x48/mimetypes/application-gerris-compressed.png
-rw-r--r-- root/root      3466 2017-11-23 20:50 ./usr/share/icons/hicolor/48x48/mimetypes/application-gerris.png
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/man/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/man/man1/
-rw-r--r-- root/root       665 2017-11-23 20:50 ./usr/share/man/man1/bat2gts.1.gz
-rw-r--r-- root/root       747 2017-11-23 20:50 ./usr/share/man/man1/gerris2D.1.gz
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/share/man/man1/gerris3D.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root       447 2017-11-23 20:50 ./usr/share/man/man1/gfs-config.1.gz
-rw-r--r-- root/root       499 2017-11-23 20:50 ./usr/share/man/man1/gfs-highlight.1.gz
-rw-r--r-- root/root       446 2017-11-23 20:50 ./usr/share/man/man1/gfs2gfs.1.gz
-rw-r--r-- root/root      1174 2017-11-23 20:50 ./usr/share/man/man1/gfs2oogl2D.1.gz
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/share/man/man1/gfs2oogl3D.1.gz -> gfs2oogl2D.1.gz
-rw-r--r-- root/root      1008 2017-11-23 20:50 ./usr/share/man/man1/gfscompare2D.1.gz
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/share/man/man1/gfscompare3D.1.gz -> gfscompare2D.1.gz
-rw-r--r-- root/root       383 2017-11-23 20:50 ./usr/share/man/man1/gfsjoin.1.gz
-rw-r--r-- root/root       433 2017-11-23 20:50 ./usr/share/man/man1/gfsjoin2D.1.gz
-rw-r--r-- root/root       433 2017-11-23 20:50 ./usr/share/man/man1/gfsjoin3D.1.gz
-rw-r--r-- root/root       466 2017-11-23 20:50 ./usr/share/man/man1/gfsxref.1.gz
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/share/man/man1/ppm2mpeg.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root       488 2017-11-23 20:50 ./usr/share/man/man1/ppmcombine.1.gz
-rw-r--r-- root/root       398 2017-11-23 20:50 ./usr/share/man/man1/rsurfaceinfo.1.gz
-rw-r--r-- root/root       332 2017-11-23 20:50 ./usr/share/man/man1/rsurfacequery.1.gz
-rw-r--r-- root/root       660 2017-11-23 20:50 ./usr/share/man/man1/shapes.1.gz
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/share/man/man1/streamanime.1.gz -> gerris2D.1.gz
-rw-r--r-- root/root       554 2017-11-23 20:50 ./usr/share/man/man1/xyz2rsurface.1.gz
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/mime/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/mime/packages/
-rw-r--r-- root/root      1048 2017-11-23 20:50 ./usr/share/mime/packages/gerris.xml


libgfs-1.3-2-dbgsym_20131206+dfsg-18+b10_armhf.deb
--------------------------------------------------

 new Debian package, version 2.0.
 size 1938696 bytes: control archive=612 bytes.
     478 bytes,    12 lines      control              
     212 bytes,     2 lines      md5sums              
 Package: libgfs-1.3-2-dbgsym
 Source: gerris (20131206+dfsg-18)
 Version: 20131206+dfsg-18+b10
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
 Installed-Size: 2195
 Depends: libgfs-1.3-2 (= 20131206+dfsg-18+b10)
 Section: debug
 Priority: optional
 Description: debug symbols for libgfs-1.3-2
 Build-Ids: 45a651ddf02e2dfdf2827fa113eed6c24e703312 d589941a6da38236cc49d3c472b510bde7dc3d3b

drwxr-xr-x root/root         0 2017-11-23 20:50 ./
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/45/
-rw-r--r-- root/root   1127860 2017-11-23 20:50 ./usr/lib/debug/.build-id/45/a651ddf02e2dfdf2827fa113eed6c24e703312.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/debug/.build-id/d5/
-rw-r--r-- root/root   1107036 2017-11-23 20:50 ./usr/lib/debug/.build-id/d5/89941a6da38236cc49d3c472b510bde7dc3d3b.debug
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/doc/
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/share/doc/libgfs-1.3-2-dbgsym -> libgfs-1.3-2


libgfs-1.3-2_20131206+dfsg-18+b10_armhf.deb
-------------------------------------------

 new Debian package, version 2.0.
 size 469600 bytes: control archive=1032 bytes.
     737 bytes,    19 lines      control              
     556 bytes,     7 lines      md5sums              
      56 bytes,     2 lines      shlibs               
      67 bytes,     2 lines      triggers             
 Package: libgfs-1.3-2
 Source: gerris (20131206+dfsg-18)
 Version: 20131206+dfsg-18+b10
 Architecture: armhf
 Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
 Installed-Size: 1584
 Depends: libc6 (>= 2.4), libglib2.0-0 (>= 2.30.0), libgts-0.7-5 (>= 0.7.6+darcs121130), libopenmpi2
 Breaks: libgfs-mpi-1.3-2 (<< 20131206+dfsg-7)
 Replaces: libgfs-mpi-1.3-2 (<< 20131206+dfsg-7)
 Section: devel
 Priority: optional
 Homepage: http://gfs.sourceforge.net/
 Description: Fluid Flow Solver -- shared libraries
  Gerris is a system for the solution of the partial differential
  equations describing fluid flow.
  .
  This package contains the shared libraries for libgfs.
  .
  This package has MPI support built in.

drwxr-xr-x root/root         0 2017-11-23 20:50 ./
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2 -> libgfs2D-1.3.so.2.0.0
-rw-r--r-- root/root    745696 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2 -> libgfs3D-1.3.so.2.0.0
-rw-r--r-- root/root    784484 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so.2.0.0
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/doc/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/doc/libgfs-1.3-2/
-rw-r--r-- root/root       228 2017-11-23 20:50 ./usr/share/doc/libgfs-1.3-2/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4622 2017-11-23 20:50 ./usr/share/doc/libgfs-1.3-2/changelog.Debian.gz
-rw-r--r-- root/root     66168 2013-12-06 15:56 ./usr/share/doc/libgfs-1.3-2/changelog.gz
-rw-r--r-- root/root      1933 2016-09-26 18:35 ./usr/share/doc/libgfs-1.3-2/copyright
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/lintian/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/lintian/overrides/
-rw-r--r-- root/root        48 2011-04-06 06:12 ./usr/share/lintian/overrides/libgfs-1.3-2


libgfs-dev_20131206+dfsg-18+b10_armhf.deb
-----------------------------------------

 new Debian package, version 2.0.
 size 103848 bytes: control archive=1880 bytes.
     766 bytes,    20 lines      control              
    2844 bytes,    44 lines      md5sums              
 Package: libgfs-dev
 Source: gerris (20131206+dfsg-18)
 Version: 20131206+dfsg-18+b10
 Architecture: armhf
 Maintainer: Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>
 Installed-Size: 319
 Depends: libgfs-1.3-2 (= 20131206+dfsg-18+b10), libgts-dev, ffmpeg
 Breaks: libgfs-mpi-dev (<< 20131206+dfsg-7)
 Replaces: libgfs-mpi-dev (<< 20131206+dfsg-7)
 Section: libdevel
 Priority: optional
 Homepage: http://gfs.sourceforge.net/
 Description: Fluid Flow Solver -- development libraries and headers
  Gerris is a system for the solution of the partial differential
  equations describing fluid flow.
  .
  This package contains the headers and development libraries needed to
  build applications using libgfs.
  .
  This package has MPI support built in.

drwxr-xr-x root/root         0 2017-11-23 20:50 ./
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/include/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/include/gerris/
-rw-r--r-- root/root      4867 2017-11-23 20:50 ./usr/include/gerris/adaptive.h
-rw-r--r-- root/root      3762 2017-11-23 20:50 ./usr/include/gerris/advection.h
-rw-r--r-- root/root      1490 2017-11-23 20:50 ./usr/include/gerris/balance.h
-rw-r--r-- root/root     10432 2017-11-23 20:50 ./usr/include/gerris/boundary.h
-rw-r--r-- root/root      2105 2017-11-23 20:50 ./usr/include/gerris/cartesian.h
-rw-r--r-- root/root     18544 2017-11-23 20:50 ./usr/include/gerris/domain.h
-rw-r--r-- root/root     10394 2017-11-23 20:50 ./usr/include/gerris/event.h
-rw-r--r-- root/root     11820 2017-11-23 20:50 ./usr/include/gerris/fluid.h
-rw-r--r-- root/root     23268 2017-11-23 20:50 ./usr/include/gerris/ftt.h
-rw-r--r-- root/root      7232 2017-11-23 20:50 ./usr/include/gerris/function.h
-rw-r--r-- root/root      4699 2017-11-23 20:50 ./usr/include/gerris/graphic.h
-rw-r--r-- root/root      1649 2017-11-23 20:50 ./usr/include/gerris/init.h
-rw-r--r-- root/root      4138 2017-11-23 20:50 ./usr/include/gerris/isocube.h
-rw-r--r-- root/root      1638 2017-11-23 20:50 ./usr/include/gerris/levelset.h
-rw-r--r-- root/root      3198 2017-11-23 20:50 ./usr/include/gerris/map.h
-rw-r--r-- root/root      5078 2017-11-23 20:50 ./usr/include/gerris/metric.h
-rw-r--r-- root/root      2675 2017-11-23 20:50 ./usr/include/gerris/moving.h
-rw-r--r-- root/root      1892 2017-11-23 20:50 ./usr/include/gerris/mpi_boundary.h
-rw-r--r-- root/root      3387 2017-11-23 20:50 ./usr/include/gerris/ocean.h
-rw-r--r-- root/root     10027 2017-11-23 20:50 ./usr/include/gerris/output.h
-rw-r--r-- root/root      1443 2017-11-23 20:50 ./usr/include/gerris/particle.h
-rw-r--r-- root/root      5385 2017-11-23 20:50 ./usr/include/gerris/poisson.h
-rw-r--r-- root/root      3333 2017-11-23 20:50 ./usr/include/gerris/refine.h
-rw-r--r-- root/root      3990 2017-11-23 20:50 ./usr/include/gerris/river.h
-rw-r--r-- root/root      5708 2017-11-23 20:50 ./usr/include/gerris/simulation.h
-rw-r--r-- root/root      3148 2017-11-23 20:50 ./usr/include/gerris/solid.h
-rw-r--r-- root/root     10086 2017-11-23 20:50 ./usr/include/gerris/source.h
-rw-r--r-- root/root      1870 2017-11-23 20:50 ./usr/include/gerris/spatial.h
-rw-r--r-- root/root      4599 2017-11-23 20:50 ./usr/include/gerris/surface.h
-rw-r--r-- root/root      4072 2017-11-23 20:50 ./usr/include/gerris/tension.h
-rw-r--r-- root/root      5180 2017-11-23 20:50 ./usr/include/gerris/timestep.h
-rw-r--r-- root/root      1589 2017-11-23 20:50 ./usr/include/gerris/unstructured.h
-rw-r--r-- root/root     10845 2017-11-23 20:50 ./usr/include/gerris/utils.h
-rw-r--r-- root/root      9866 2017-11-23 20:50 ./usr/include/gerris/variable.h
-rw-r--r-- root/root       195 2017-11-23 20:50 ./usr/include/gerris/version.h
-rw-r--r-- root/root      6340 2017-11-23 20:50 ./usr/include/gerris/vof.h
-rw-r--r-- root/root      2073 2017-11-23 20:50 ./usr/include/gerris/wave.h
-rw-r--r-- root/root      1525 2017-11-23 20:50 ./usr/include/gfs.h
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/libgfs2D-1.3.so -> libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/libgfs2D.so -> libgfs2D-1.3.so.2.0.0
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/libgfs3D-1.3.so -> libgfs3D-1.3.so.2.0.0
lrwxrwxrwx root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/libgfs3D.so -> libgfs3D-1.3.so.2.0.0
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/pkgconfig/
-rw-r--r-- root/root       274 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/pkgconfig/gerris2D.pc
-rw-r--r-- root/root       263 2017-11-23 20:50 ./usr/lib/arm-linux-gnueabihf/pkgconfig/gerris3D.pc
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/doc/
drwxr-xr-x root/root         0 2017-11-23 20:50 ./usr/share/doc/libgfs-dev/
-rw-r--r-- root/root       228 2017-11-23 20:50 ./usr/share/doc/libgfs-dev/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4622 2017-11-23 20:50 ./usr/share/doc/libgfs-dev/changelog.Debian.gz
-rw-r--r-- root/root     66168 2013-12-06 15:56 ./usr/share/doc/libgfs-dev/changelog.gz
-rw-r--r-- root/root      1933 2016-09-26 18:35 ./usr/share/doc/libgfs-dev/copyright


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 94736
Build-Time: 608
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 712
Job: gerris_20131206+dfsg-18
Machine Architecture: armhf
Package: gerris
Package-Time: 1348
Source-Version: 20131206+dfsg-18
Space: 94736
Status: successful
Version: 20131206+dfsg-18+b10
--------------------------------------------------------------------------------
Finished at 2018-03-23T12:49:54Z
Build needed 00:22:28, 94736k disk space