fastqtl →
2.184+v7+dfsg-4 →
armhf → 2023-12-18 04:58:15
sbuild (Debian sbuild) 0.85.0 (04 January 2023) on test2023
+==============================================================================+
| fastqtl 2.184+v7+dfsg-4 (armhf) Mon, 18 Dec 2023 04:55:42 +0000 |
+==============================================================================+
Package: fastqtl
Version: 2.184+v7+dfsg-4
Source Version: 2.184+v7+dfsg-4
Distribution: trixie-staging
Machine Architecture: arm64
Host Architecture: armhf
Build Architecture: armhf
Build Type: any
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/trixie-staging-armhf-sbuild-694c38bd-992f-4e28-b5c6-e98dd1e52d3e' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/fastqtl-HCmfmi/resolver-FaXnqR' with '<<RESOLVERDIR>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private trixie-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private trixie-staging/main Sources [14.3 MB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf Packages [15.0 MB]
Fetched 29.3 MB in 5s (5447 kB/s)
Reading package lists...
W: http://172.17.4.1/private/dists/trixie-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'fastqtl' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/fastqtl.git
Please use:
git clone https://salsa.debian.org/med-team/fastqtl.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 17.2 MB of source archives.
Get:1 http://172.17.4.1/private trixie-staging/main fastqtl 2.184+v7+dfsg-4 (dsc) [2406 B]
Get:2 http://172.17.4.1/private trixie-staging/main fastqtl 2.184+v7+dfsg-4 (tar) [17.1 MB]
Get:3 http://172.17.4.1/private trixie-staging/main fastqtl 2.184+v7+dfsg-4 (diff) [20.9 kB]
Fetched 17.2 MB in 2s (8466 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/fastqtl-HCmfmi/fastqtl-2.184+v7+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/fastqtl-HCmfmi' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-python, python3, libboost-dev, libboost-iostreams-dev, libboost-program-options-dev, libgsl-dev, r-mathlib, zlib1g-dev, libblas-dev, libeigen3-dev, libhts-dev, libbz2-dev, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3, libboost-dev, libboost-iostreams-dev, libboost-program-options-dev, libgsl-dev, r-mathlib, zlib1g-dev, libblas-dev, libeigen3-dev, libhts-dev, libbz2-dev, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [792 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [824 B]
Fetched 2225 B in 0s (0 B/s)
Reading package lists...
Reading package lists...
Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils bsdutils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dpkg-dev dwz file gettext
gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
libblas-dev libblas3 libblkid1 libboost-dev libboost-iostreams-dev
libboost-iostreams1.74-dev libboost-iostreams1.74.0
libboost-program-options-dev libboost-program-options1.74-dev
libboost-program-options1.74.0 libboost-regex1.74-dev libboost-regex1.74.0
libboost1.74-dev libbrotli1 libbz2-dev libcurl3-gnutls libcurl4-gnutls-dev
libdebhelper-perl libdeflate-dev libdeflate0 libdpkg-perl libeigen3-dev
libelf1 libexpat1 libfile-stripnondeterminism-perl libgsl-dev libgsl27
libgslcblas0 libhts-dev libhts3 libhtscodecs2 libicu-dev libicu72
liblzma-dev liblzma5 libmagic-mgc libmagic1 libmount1 libnghttp2-14
libpipeline1 libpkgconf3 libpsl5 libpython3-stdlib libpython3.11-minimal
libpython3.11-stdlib librtmp1 libsmartcols1 libssh2-1 libsub-override-perl
libtool libuchardet0 libuuid1 libxml2 m4 man-db media-types mount netbase
pkg-config pkgconf pkgconf-bin po-debconf python3 python3-distutils
python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools
python3.11 python3.11-minimal r-mathlib sensible-utils util-linux xz-utils
zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make flit python3-build
python3-installer python3-wheel debian-keyring gettext-doc libasprintf-dev
libgettextpo-dev groff liblapack-doc libboost-doc libboost1.74-doc
libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev
libboost-context1.74-dev libboost-contract1.74-dev
libboost-coroutine1.74-dev libboost-date-time1.74-dev
libboost-exception1.74-dev libboost-fiber1.74-dev
libboost-filesystem1.74-dev libboost-graph1.74-dev
libboost-graph-parallel1.74-dev libboost-locale1.74-dev libboost-log1.74-dev
libboost-math1.74-dev libboost-mpi1.74-dev libboost-mpi-python1.74-dev
libboost-numpy1.74-dev libboost-python1.74-dev libboost-random1.74-dev
libboost-serialization1.74-dev libboost-stacktrace1.74-dev
libboost-system1.74-dev libboost-test1.74-dev libboost-thread1.74-dev
libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev
libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev
libcurl4-doc libgnutls28-dev libidn-dev libkrb5-dev libldap2-dev librtmp-dev
libssh2-1-dev git bzr libeigen3-doc gsl-ref-psdoc | gsl-doc-pdf
| gsl-doc-info | gsl-ref-html icu-doc liblzma-doc cryptsetup-bin libtool-doc
gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
nfs-common libmail-box-perl python3-doc python3-tk python3-venv
python-setuptools-doc python3.11-venv python3.11-doc binfmt-support
dosfstools kbd util-linux-extra util-linux-locales
Recommended packages:
libalgorithm-merge-perl curl | wget | lynx bzip2-doc ca-certificates
libfile-fcntllock-perl libarchive-cpio-perl publicsuffix libltdl-dev
uuid-runtime libmail-sendmail-perl r-base-core r-base-dev
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
libblas-dev libblas3 libboost-dev libboost-iostreams-dev
libboost-iostreams1.74-dev libboost-iostreams1.74.0
libboost-program-options-dev libboost-program-options1.74-dev
libboost-program-options1.74.0 libboost-regex1.74-dev libboost-regex1.74.0
libboost1.74-dev libbrotli1 libbz2-dev libcurl3-gnutls libcurl4-gnutls-dev
libdebhelper-perl libdeflate-dev libdeflate0 libeigen3-dev libelf1 libexpat1
libfile-stripnondeterminism-perl libgsl-dev libgsl27 libgslcblas0 libhts-dev
libhts3 libhtscodecs2 libicu-dev libicu72 liblzma-dev libmagic-mgc libmagic1
libnghttp2-14 libpipeline1 libpkgconf3 libpsl5 libpython3-stdlib
libpython3.11-minimal libpython3.11-stdlib librtmp1 libssh2-1
libsub-override-perl libtool libuchardet0 libxml2 m4 man-db media-types
netbase pkg-config pkgconf pkgconf-bin po-debconf python3 python3-distutils
python3-lib2to3 python3-minimal python3-pkg-resources python3-setuptools
python3.11 python3.11-minimal r-mathlib sbuild-build-depends-main-dummy
sensible-utils zlib1g-dev
The following packages will be upgraded:
bsdutils dpkg-dev libblkid1 libdpkg-perl liblzma5 libmount1 libsmartcols1
libuuid1 mount util-linux xz-utils
11 upgraded, 84 newly installed, 0 to remove and 65 not upgraded.
1 not fully installed or removed.
Need to get 58.7 MB/60.7 MB of archives.
After this operation, 335 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [952 B]
Get:2 http://172.17.4.1/private trixie-staging/main armhf mount armhf 2.39.3-2 [134 kB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf bsdutils armhf 1:2.39.3-2 [86.6 kB]
Get:4 http://172.17.4.1/private trixie-staging/main armhf util-linux armhf 2.39.3-2 [1113 kB]
Get:5 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-minimal armhf 3.11.7-2 [801 kB]
Get:6 http://172.17.4.1/private trixie-staging/main armhf libexpat1 armhf 2.5.0-2 [76.8 kB]
Get:7 http://172.17.4.1/private trixie-staging/main armhf python3.11-minimal armhf 3.11.7-2 [1677 kB]
Get:8 http://172.17.4.1/private trixie-staging/main armhf python3-minimal armhf 3.11.4-5 [26.2 kB]
Get:9 http://172.17.4.1/private trixie-staging/main armhf media-types all 10.1.0 [26.9 kB]
Get:10 http://172.17.4.1/private trixie-staging/main armhf netbase all 6.4 [12.8 kB]
Get:11 http://172.17.4.1/private trixie-staging/main armhf liblzma5 armhf 5.4.5-0.1 [226 kB]
Get:12 http://172.17.4.1/private trixie-staging/main armhf libuuid1 armhf 2.39.3-2 [28.2 kB]
Get:13 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-stdlib armhf 3.11.7-2 [1694 kB]
Get:14 http://172.17.4.1/private trixie-staging/main armhf python3.11 armhf 3.11.7-2 [590 kB]
Get:15 http://172.17.4.1/private trixie-staging/main armhf libpython3-stdlib armhf 3.11.4-5 [9200 B]
Get:16 http://172.17.4.1/private trixie-staging/main armhf python3 armhf 3.11.4-5 [26.2 kB]
Get:17 http://172.17.4.1/private trixie-staging/main armhf libblkid1 armhf 2.39.3-2 [145 kB]
Get:18 http://172.17.4.1/private trixie-staging/main armhf libmount1 armhf 2.39.3-2 [168 kB]
Get:19 http://172.17.4.1/private trixie-staging/main armhf libsmartcols1 armhf 2.39.3-2 [102 kB]
Get:20 http://172.17.4.1/private trixie-staging/main armhf libuchardet0 armhf 0.0.8-1 [65.5 kB]
Get:21 http://172.17.4.1/private trixie-staging/main armhf groff-base armhf 1.23.0-3 [1033 kB]
Get:22 http://172.17.4.1/private trixie-staging/main armhf bsdextrautils armhf 2.39.3-2 [81.2 kB]
Get:23 http://172.17.4.1/private trixie-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:24 http://172.17.4.1/private trixie-staging/main armhf man-db armhf 2.12.0-1 [1358 kB]
Get:25 http://172.17.4.1/private trixie-staging/main armhf sensible-utils all 0.0.20 [19.3 kB]
Get:26 http://172.17.4.1/private trixie-staging/main armhf libmagic-mgc armhf 1:5.45-2 [314 kB]
Get:27 http://172.17.4.1/private trixie-staging/main armhf libmagic1 armhf 1:5.45-2 [96.1 kB]
Get:28 http://172.17.4.1/private trixie-staging/main armhf file armhf 1:5.45-2 [41.6 kB]
Get:29 http://172.17.4.1/private trixie-staging/main armhf gettext-base armhf 0.21-14 [157 kB]
Get:30 http://172.17.4.1/private trixie-staging/main armhf xz-utils armhf 5.4.5-0.1 [499 kB]
Get:31 http://172.17.4.1/private trixie-staging/main armhf m4 armhf 1.4.19-4 [256 kB]
Get:32 http://172.17.4.1/private trixie-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:33 http://172.17.4.1/private trixie-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:34 http://172.17.4.1/private trixie-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:35 http://172.17.4.1/private trixie-staging/main armhf autopoint all 0.21-14 [496 kB]
Get:36 http://172.17.4.1/private trixie-staging/main armhf libdebhelper-perl all 13.11.8 [82.1 kB]
Get:37 http://172.17.4.1/private trixie-staging/main armhf libtool all 2.4.7-7 [517 kB]
Get:38 http://172.17.4.1/private trixie-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:39 http://172.17.4.1/private trixie-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:40 http://172.17.4.1/private trixie-staging/main armhf libsub-override-perl all 0.10-1 [10.6 kB]
Get:41 http://172.17.4.1/private trixie-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:42 http://172.17.4.1/private trixie-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:43 http://172.17.4.1/private trixie-staging/main armhf libelf1 armhf 0.188-2.1+rpi1 [171 kB]
Get:44 http://172.17.4.1/private trixie-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:45 http://172.17.4.1/private trixie-staging/main armhf libicu72 armhf 72.1-4 [9009 kB]
Get:46 http://172.17.4.1/private trixie-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.3 [571 kB]
Get:47 http://172.17.4.1/private trixie-staging/main armhf gettext armhf 0.21-14 [1203 kB]
Get:48 http://172.17.4.1/private trixie-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:49 http://172.17.4.1/private trixie-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:50 http://172.17.4.1/private trixie-staging/main armhf debhelper all 13.11.8 [956 kB]
Get:51 http://172.17.4.1/private trixie-staging/main armhf python3-lib2to3 all 3.11.5-1 [77.5 kB]
Get:52 http://172.17.4.1/private trixie-staging/main armhf python3-distutils all 3.11.5-1 [131 kB]
Get:53 http://172.17.4.1/private trixie-staging/main armhf python3-pkg-resources all 68.1.2-2 [241 kB]
Get:54 http://172.17.4.1/private trixie-staging/main armhf python3-setuptools all 68.1.2-2 [468 kB]
Get:55 http://172.17.4.1/private trixie-staging/main armhf dh-python all 6.20231204 [108 kB]
Get:56 http://172.17.4.1/private trixie-staging/main armhf icu-devtools armhf 72.1-4 [174 kB]
Get:57 http://172.17.4.1/private trixie-staging/main armhf libblas3 armhf 3.11.0-2 [100.0 kB]
Get:58 http://172.17.4.1/private trixie-staging/main armhf libblas-dev armhf 3.11.0-2 [106 kB]
Get:59 http://172.17.4.1/private trixie-staging/main armhf libboost1.74-dev armhf 1.74.0+ds1-23 [9511 kB]
Get:60 http://172.17.4.1/private trixie-staging/main armhf libboost-dev armhf 1.74.0.3+b4 [4824 B]
Get:61 http://172.17.4.1/private trixie-staging/main armhf libboost-regex1.74.0 armhf 1.74.0+ds1-23 [421 kB]
Get:62 http://172.17.4.1/private trixie-staging/main armhf libicu-dev armhf 72.1-4 [9956 kB]
Get:63 http://172.17.4.1/private trixie-staging/main armhf libboost-regex1.74-dev armhf 1.74.0+ds1-23 [526 kB]
Get:64 http://172.17.4.1/private trixie-staging/main armhf libboost-iostreams1.74.0 armhf 1.74.0+ds1-23 [236 kB]
Get:65 http://172.17.4.1/private trixie-staging/main armhf libboost-iostreams1.74-dev armhf 1.74.0+ds1-23 [245 kB]
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Get:67 http://172.17.4.1/private trixie-staging/main armhf libboost-program-options1.74.0 armhf 1.74.0+ds1-23 [307 kB]
Get:68 http://172.17.4.1/private trixie-staging/main armhf libboost-program-options1.74-dev armhf 1.74.0+ds1-23 [345 kB]
Get:69 http://172.17.4.1/private trixie-staging/main armhf libboost-program-options-dev armhf 1.74.0.3+b4 [4616 B]
Get:70 http://172.17.4.1/private trixie-staging/main armhf libbrotli1 armhf 1.1.0-2 [280 kB]
Get:71 http://172.17.4.1/private trixie-staging/main armhf libbz2-dev armhf 1.0.8-5+b2 [26.8 kB]
Get:72 http://172.17.4.1/private trixie-staging/main armhf libnghttp2-14 armhf 1.58.0-1 [61.7 kB]
Get:73 http://172.17.4.1/private trixie-staging/main armhf libpsl5 armhf 0.21.2-1+b1 [57.8 kB]
Get:74 http://172.17.4.1/private trixie-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:75 http://172.17.4.1/private trixie-staging/main armhf libssh2-1 armhf 1.11.0-3 [195 kB]
Get:76 http://172.17.4.1/private trixie-staging/main armhf libcurl3-gnutls armhf 8.4.0-2+rpi1 [358 kB]
Get:77 http://172.17.4.1/private trixie-staging/main armhf libcurl4-gnutls-dev armhf 8.4.0-2+rpi1 [441 kB]
Get:78 http://172.17.4.1/private trixie-staging/main armhf libdeflate0 armhf 1.18-1 [38.3 kB]
Get:79 http://172.17.4.1/private trixie-staging/main armhf libdeflate-dev armhf 1.18-1 [45.8 kB]
Get:80 http://172.17.4.1/private trixie-staging/main armhf libpkgconf3 armhf 1.8.1-1 [31.3 kB]
Get:81 http://172.17.4.1/private trixie-staging/main armhf pkgconf-bin armhf 1.8.1-1 [27.8 kB]
Get:82 http://172.17.4.1/private trixie-staging/main armhf pkgconf armhf 1.8.1-1 [25.9 kB]
Get:83 http://172.17.4.1/private trixie-staging/main armhf pkg-config armhf 1.8.1-1 [13.7 kB]
Get:84 http://172.17.4.1/private trixie-staging/main armhf libeigen3-dev all 3.4.0-4 [1041 kB]
Get:85 http://172.17.4.1/private trixie-staging/main armhf libgslcblas0 armhf 2.7.1+dfsg-6 [79.3 kB]
Get:86 http://172.17.4.1/private trixie-staging/main armhf libgsl27 armhf 2.7.1+dfsg-6 [753 kB]
Get:87 http://172.17.4.1/private trixie-staging/main armhf libgsl-dev armhf 2.7.1+dfsg-6 [965 kB]
Get:88 http://172.17.4.1/private trixie-staging/main armhf libhtscodecs2 armhf 1.5.2-1 [60.0 kB]
Get:89 http://172.17.4.1/private trixie-staging/main armhf libhts3 armhf 1.18+ds-1 [380 kB]
Get:90 http://172.17.4.1/private trixie-staging/main armhf liblzma-dev armhf 5.4.5-0.1 [278 kB]
Get:91 http://172.17.4.1/private trixie-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-3 [901 kB]
Get:92 http://172.17.4.1/private trixie-staging/main armhf libhts-dev armhf 1.18+ds-1 [1539 kB]
Get:93 http://172.17.4.1/private trixie-staging/main armhf r-mathlib armhf 4.3.2-1 [2404 kB]
debconf: delaying package configuration, since apt-utils is not installed
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+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 6.1.47-v8+ #1 SMP PREEMPT Fri Sep 1 07:05:33 BST 2023 arm64 (aarch64)
Toolchain package versions: binutils_2.41-6+rpi1 dpkg-dev_1.22.1+rpi1 g++-12_12.3.0-10+rpi1 g++-13_13.2.0-5+rpi1 gcc-12_12.3.0-10+rpi1 gcc-13_13.2.0-5+rpi1 libc6-dev_2.37-12+rpi2 libstdc++-12-dev_12.3.0-10+rpi1 libstdc++-13-dev_13.2.0-5+rpi1 libstdc++6_13.2.0-5+rpi1 linux-libc-dev_6.5.6-1+rpi1
Package versions: adduser_3.137 apt_2.7.6 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13+rpi1 base-passwd_3.6.2 bash_5.2.15-2 binutils_2.41-6+rpi1 binutils-arm-linux-gnueabihf_2.41-6+rpi1 binutils-common_2.41-6+rpi1 bsdextrautils_2.39.3-2 bsdutils_1:2.39.3-2 build-essential_12.9 bzip2_1.0.8-5+b2 coreutils_9.1-1 cpp_4:13.2.0-1+rpi1 cpp-12_12.3.0-10+rpi1 cpp-13_13.2.0-5+rpi1 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.8 debianutils_5.14 dh-autoreconf_20 dh-python_6.20231204 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dirmngr_2.2.40-1.1 dpkg_1.22.1+rpi1 dpkg-dev_1.22.1+rpi1 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.32.1-1 file_1:5.45-2 findutils_4.9.0-5 g++_4:13.2.0-1+rpi1 g++-12_12.3.0-10+rpi1 g++-13_13.2.0-5+rpi1 gcc_4:13.2.0-1+rpi1 gcc-10-base_10.4.0-7+rpi1 gcc-12_12.3.0-10+rpi1 gcc-12-base_12.3.0-10+rpi1 gcc-13_13.2.0-5+rpi1 gcc-13-base_13.2.0-5+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 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libpython3.11-minimal_3.11.7-2 libpython3.11-stdlib_3.11.7-2 libreadline8_8.2-1.3 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg1-3 libsasl2-modules-db_2.1.28+dfsg1-3 libseccomp2_2.5.4-1+rpi1+b1 libselinux1_3.5-1 libsemanage-common_3.5-1 libsemanage2_3.5-1 libsepol2_3.5-1 libsframe1_2.41-6+rpi1 libsmartcols1_2.39.3-2 libsqlite3-0_3.43.2-1 libss2_1.47.0-2 libssh2-1_1.11.0-3 libssl3_3.0.11-1 libstdc++-12-dev_12.3.0-10+rpi1 libstdc++-13-dev_13.2.0-5+rpi1 libstdc++6_13.2.0-5+rpi1 libsub-override-perl_0.10-1 libsystemd0_254.5-1+rpi1 libtasn1-6_4.19.0-3 libtext-charwidth-perl_0.04-11 libtext-iconv-perl_1.7-8 libtinfo6_6.4+20231016-1 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-7 libubsan1_13.2.0-5+rpi1 libuchardet0_0.0.8-1 libudev1_254.5-1+rpi1 libunistring5_1.1-2 libuuid1_2.39.3-2 libxml2_2.9.14+dfsg-1.3 libxxhash0_0.8.2-2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.5.6-1+rpi1 login_1:4.13+dfsg1-3 logsave_1.47.0-2 lsb-base_11.6+rpi1 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+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: fastqtl
Binary: fastqtl, fastqtl-doc
Architecture: any all
Version: 2.184+v7+dfsg-4
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Dylan Aïssi <daissi@debian.org>, Étienne Mollier <emollier@debian.org>
Homepage: http://fastqtl.sourceforge.net/
Standards-Version: 4.6.1
Vcs-Browser: https://salsa.debian.org/med-team/fastqtl
Vcs-Git: https://salsa.debian.org/med-team/fastqtl.git
Testsuite: autopkgtest
Build-Depends: debhelper-compat (= 13), dh-python, python3, libboost-dev, libboost-iostreams-dev, libboost-program-options-dev, libgsl-dev, r-mathlib, zlib1g-dev, libblas-dev, libeigen3-dev, libhts-dev, libbz2-dev
Package-List:
fastqtl deb science optional arch=any
fastqtl-doc deb doc optional arch=all
Checksums-Sha1:
afda0774d21c6c870b5bf319751f46a641d1dd12 17128664 fastqtl_2.184+v7+dfsg.orig.tar.xz
5b737b2493b7569eb93b82fed1a81ccd584009c9 20936 fastqtl_2.184+v7+dfsg-4.debian.tar.xz
Checksums-Sha256:
a16310e5cc00873707decb7dad8acd9d5ae22bf4ade1fdbba3a99afc650a6232 17128664 fastqtl_2.184+v7+dfsg.orig.tar.xz
4ad54980be7c13f24cdd856456542c1b0947a328b92a127ff9c91313b4085ea6 20936 fastqtl_2.184+v7+dfsg-4.debian.tar.xz
Files:
0315c13229da6648d451f9025370a919 17128664 fastqtl_2.184+v7+dfsg.orig.tar.xz
8b6d3ab4b8e1e56f2e9dedd79964300a 20936 fastqtl_2.184+v7+dfsg-4.debian.tar.xz
Dgit: 1b9cf93248bc5bf8fa33ef1d00f928a70726fe89 debian archive/debian/2.184+v7+dfsg-4 https://git.dgit.debian.org/fastqtl
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gpgv: Signature made Fri Dec 15 19:16:10 2023 UTC
gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv: issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./fastqtl_2.184+v7+dfsg-4.dsc: no acceptable signature found
dpkg-source: info: extracting fastqtl in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking fastqtl_2.184+v7+dfsg.orig.tar.xz
dpkg-source: info: unpacking fastqtl_2.184+v7+dfsg-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 01_Makefile_dynamic_hardenings.patch
dpkg-source: info: applying 02_Replace_libtabix_by_libhts.patch
dpkg-source: info: applying 03_Reproducible_builds.patch
dpkg-source: info: applying cross.patch
dpkg-source: info: applying set_path.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=trixie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=trixie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=124
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=trixie-staging-armhf-sbuild-694c38bd-992f-4e28-b5c6-e98dd1e52d3e
SCHROOT_UID=114
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage --sanitize-env -us -uc -mRaspbian pi5 test autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package fastqtl
dpkg-buildpackage: info: source version 2.184+v7+dfsg-4
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --with python3
dh_auto_clean
make -j4 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -f obj/*.o bin/fastQTL
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules binary-arch
dh binary-arch --with python3
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p /<<PKGBUILDDIR>>/obj/
mkdir -p /<<PKGBUILDDIR>>/bin/
dh_auto_build -- CXXFLAGS='-g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14'
make -j4 "INSTALL=install --strip-program=true" "CXXFLAGS=-g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14"
make[2]: Entering directory '/<<PKGBUILDDIR>>'
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisMapping.o -c src/analysisMapping.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisNominal.o -c src/analysisNominal.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisNominalBest.o -c src/analysisNominalBest.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutation.o -c src/analysisPermutation.cpp -Isrc
src/analysisPermutation.cpp: In member function ‘void data::runPermutation(std::string, std::vector<int>)’:
src/analysisPermutation.cpp:75:27: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<float*, vector<float> >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations]
75 | random_shuffle(phenotype_curr.begin(), phenotype_curr.end());
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/algorithm:61,
from src/utils/utils.h:54,
from src/data.h:25,
from src/analysisPermutation.cpp:17:
/usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here
4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last)
| ^~~~~~~~~~~~~~
In file included from src/analysisNominal.cpp:17:
src/data.h: In member function ‘double data::getCorrelation(std::vector<float>&, std::vector<float>&)’:
src/data.h:180:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
180 | case 3: sum0 += vec1[i+2] * vec2[i+2];
src/data.h:181:9: note: here
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
| ^~~~
src/data.h:181:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
src/data.h:182:9: note: here
182 | case 1: sum0 += vec1[i+0] * vec2[i+0];
| ^~~~
In file included from src/analysisNominalBest.cpp:17:
src/data.h: In member function ‘double data::getCorrelation(std::vector<float>&, std::vector<float>&)’:
src/data.h:180:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
180 | case 3: sum0 += vec1[i+2] * vec2[i+2];
src/data.h:181:9: note: here
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
| ^~~~
src/data.h:181:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
src/data.h:182:9: note: here
182 | case 1: sum0 += vec1[i+0] * vec2[i+0];
| ^~~~
src/data.h: In member function ‘double data::getCorrelation(std::vector<float>&, std::vector<float>&)’:
src/data.h:180:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
180 | case 3: sum0 += vec1[i+2] * vec2[i+2];
src/data.h:181:9: note: here
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
| ^~~~
src/data.h:181:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
src/data.h:182:9: note: here
182 | case 1: sum0 += vec1[i+0] * vec2[i+0];
| ^~~~
In file included from src/analysisMapping.cpp:17:
src/data.h: In member function ‘double data::getCorrelation(std::vector<float>&, std::vector<float>&)’:
src/data.h:180:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
180 | case 3: sum0 += vec1[i+2] * vec2[i+2];
src/data.h:181:9: note: here
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
| ^~~~
src/data.h:181:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
src/data.h:182:9: note: here
182 | case 1: sum0 += vec1[i+0] * vec2[i+0];
| ^~~~
In file included from /usr/include/c++/13/vector:72,
from src/utils/utils.h:46:
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutationInteraction.o -c src/analysisPermutationInteraction.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutationPerGroup.o -c src/analysisPermutationPerGroup.cpp -Isrc
In file included from /usr/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
inlined from ‘void data::runPermutation(std::string, std::vector<int>)’ at src/analysisPermutation.cpp:83:31:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21,
inlined from ‘void data::runPermutation(std::string, std::vector<int>)’ at src/analysisPermutation.cpp:104:79:
/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/analysisPermutationSequence.o -c src/analysisPermutationSequence.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/commands.o -c src/commands.cpp -Isrc
src/analysisPermutationInteraction.cpp: In member function ‘void data::runPermutationInteraction(std::string, int)’:
src/analysisPermutationInteraction.cpp:48:39: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<float*, vector<float> >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations]
48 | random_shuffle(permuted_phenotypes[perm].begin(), permuted_phenotypes[perm].end());
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/algorithm:61,
from src/utils/utils.h:54,
from src/data.h:25,
from src/analysisPermutationInteraction.cpp:17:
/usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here
4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last)
| ^~~~~~~~~~~~~~
src/analysisPermutationInteraction.cpp:76:47: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<float*, vector<float> >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations]
76 | random_shuffle(phenotype_curr.begin(), phenotype_curr.end());
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here
4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last)
| ^~~~~~~~~~~~~~
src/data.h: In member function ‘double data::getCorrelation(std::vector<float>&, std::vector<float>&)’:
src/data.h:180:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
180 | case 3: sum0 += vec1[i+2] * vec2[i+2];
src/data.h:181:9: note: here
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
| ^~~~
src/data.h:181:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
src/data.h:182:9: note: here
182 | case 1: sum0 += vec1[i+0] * vec2[i+0];
| ^~~~
In file included from src/analysisPermutationPerGroup.cpp:17:
src/data.h: In member function ‘double data::getCorrelation(std::vector<float>&, std::vector<float>&)’:
src/data.h:180:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
180 | case 3: sum0 += vec1[i+2] * vec2[i+2];
src/data.h:181:9: note: here
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
| ^~~~
src/data.h:181:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
src/data.h:182:9: note: here
182 | case 1: sum0 += vec1[i+0] * vec2[i+0];
| ^~~~
In file included from /usr/include/c++/13/vector:72,
from src/utils/utils.h:46,
from src/data.h:25:
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
In file included from src/analysisPermutationSequence.cpp:17:
src/data.h: In member function ‘double data::getCorrelation(std::vector<float>&, std::vector<float>&)’:
src/data.h:180:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
180 | case 3: sum0 += vec1[i+2] * vec2[i+2];
src/data.h:181:9: note: here
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
| ^~~~
src/data.h:181:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
src/data.h:182:9: note: here
182 | case 1: sum0 += vec1[i+0] * vec2[i+0];
| ^~~~
In file included from /usr/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
inlined from ‘void data::runPermutationPerGroup(std::string, std::vector<int>)’ at src/analysisPermutationPerGroup.cpp:107:22:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21,
inlined from ‘void data::runPermutationPerGroup(std::string, std::vector<int>)’ at src/analysisPermutationPerGroup.cpp:128:70:
/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:72,
from src/utils/utils.h:46,
from src/data.h:25:
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
445 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/df.o -c src/df.cpp -Isrc
/usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
In file included from /usr/include/c++/13/vector:66:
In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
inlined from ‘void data::runPermutation(std::string, std::string)’ at src/analysisPermutationSequence.cpp:89:22:
/usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
1289 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’,
inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21,
inlined from ‘void data::runPermutation(std::string, std::string)’ at src/analysisPermutationSequence.cpp:105:70:
/usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/fastQTL.o -c src/fastQTL.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/management.o -c src/management.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/mle.o -c src/mle.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readCovariates.o -c src/readCovariates.cpp -Isrc
In file included from src/management.cpp:20:
src/data.h: In member function ‘double data::getCorrelation(std::vector<float>&, std::vector<float>&)’:
src/data.h:180:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
180 | case 3: sum0 += vec1[i+2] * vec2[i+2];
src/data.h:181:9: note: here
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
| ^~~~
src/data.h:181:22: warning: this statement may fall through [-Wimplicit-fallthrough=]
181 | case 2: sum0 += vec1[i+1] * vec2[i+1];
src/data.h:182:9: note: here
182 | case 1: sum0 += vec1[i+0] * vec2[i+0];
| ^~~~
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readGenotypes.o -c src/readGenotypes.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readGroups.o -c src/readGroups.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readInclusionsExclusions.o -c src/readInclusionsExclusions.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readInteractions.o -c src/readInteractions.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readPhenotypes.o -c src/readPhenotypes.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/readThresholds.o -c src/readThresholds.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/residualizer.o -c src/residualizer.cpp -Isrc
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/tabix.o -c src/utils/tabix.cpp -Isrc
src/utils/tabix.cpp: In constructor ‘Tabix::Tabix(std::string&)’:
src/utils/tabix.cpp:17:22: warning: ‘int bgzf_is_bgzf(const char*)’ is deprecated: Use bgzf_compression() or hts_detect_format() instead [-Wdeprecated-declarations]
17 | if ( bgzf_is_bgzf(cfilename)!=1 )
| ~~~~~~~~~~~~^~~~~~~~~~~
In file included from src/utils/tabix.hpp:12,
from src/utils/tabix.cpp:6:
/usr/include/htslib/bgzf.h:270:9: note: declared here
270 | int bgzf_is_bgzf(const char *fn) HTS_DEPRECATED("Use bgzf_compression() or hts_detect_format() instead");
| ^~~~~~~~~~~~
g++ -std=c++11 -O3 -D_FAST_CORRELATION -Wall -Wextra -Wno-sign-compare -g -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -std=c++14 -Wdate-time -D_FORTIFY_SOURCE=2 -o obj/utils.o -c src/utils/utils.cpp -Isrc
src/utils/utils.cpp: In function ‘void putils::random_shuffle(std::vector<std::vector<float> >&)’:
src/utils/utils.cpp:133:31: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<int*, vector<int> >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations]
133 | random_shuffle(O.begin(), O.end());
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/algorithm:61,
from src/utils/utils.h:54,
from src/utils/utils.cpp:17:
/usr/include/c++/13/bits/stl_algo.h:4581:5: note: declared here
4581 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last)
| ^~~~~~~~~~~~~~
g++ -std=c++11 -O3 -Wl,-z,relro -Wl,-z,now obj/analysisMapping.o obj/analysisNominal.o obj/analysisNominalBest.o obj/analysisPermutation.o obj/analysisPermutationInteraction.o obj/analysisPermutationPerGroup.o obj/analysisPermutationSequence.o obj/commands.o obj/df.o obj/fastQTL.o obj/management.o obj/mle.o obj/readCovariates.o obj/readGenotypes.o obj/readGroups.o obj/readInclusionsExclusions.o obj/readInteractions.o obj/readPhenotypes.o obj/readThresholds.o obj/residualizer.o obj/tabix.o obj/utils.o -lRmath -lhts -lm -lz -lbz2 -lboost_iostreams -lboost_program_options -lgslcblas -lgsl -lblas -o bin/fastQTL
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
cd /<<PKGBUILDDIR>>/example/ && \
tar Jcvf examples.tar.xz * --sort=name --mode=go=rX,u+rw,a-s --owner=root --group=root --numeric-owner
covariates.txt.gz
genotypes.vcf.gz
genotypes.vcf.gz.tbi
interaction.txt
phenotypes.bed.gz
phenotypes.bed.gz.tbi
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
dh_prep -a
dh_auto_install -a
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_python3 -a
I: dh_python3 tools:114: replacing shebang in debian/fastqtl/usr/bin/annotate_outputs.py
I: dh_python3 tools:114: replacing shebang in debian/fastqtl/usr/bin/merge_chunks.py
I: dh_python3 tools:114: replacing shebang in debian/fastqtl/usr/bin/run_FastQTL_threaded.py
I: dh_python3 tools:114: replacing shebang in debian/fastqtl/usr/bin/run_chunk.py
I: dh_python3 tools:114: replacing shebang in debian/fastqtl/usr/bin/sort_index_pairs.py
dh_lintian -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
debian/rules execute_after_dh_fixperms-arch
make[1]: Entering directory '/<<PKGBUILDDIR>>'
chmod -x debian/*/usr/share/fastqtl/*.R
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_missing -a
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: debian/fastqtl/usr/bin/fastQTL contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/fastqtl/usr/bin/fastQTL was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/fastqtl/usr/bin/fastQTL was not linked against libblas.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'fastqtl-dbgsym' in '../fastqtl-dbgsym_2.184+v7+dfsg-4_armhf.deb'.
dpkg-deb: building package 'fastqtl' in '../fastqtl_2.184+v7+dfsg-4_armhf.deb'.
dpkg-genbuildinfo --build=any -O../fastqtl_2.184+v7+dfsg-4_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian pi5 test autobuilder <root@raspbian.org> -O../fastqtl_2.184+v7+dfsg-4_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-12-18T04:58:11Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
fastqtl_2.184+v7+dfsg-4_armhf.changes:
--------------------------------------
Format: 1.8
Date: Fri, 15 Dec 2023 19:31:08 +0100
Source: fastqtl
Binary: fastqtl fastqtl-dbgsym
Architecture: armhf
Version: 2.184+v7+dfsg-4
Distribution: trixie-staging
Urgency: medium
Maintainer: Raspbian pi5 test autobuilder <root@raspbian.org>
Changed-By: Étienne Mollier <emollier@debian.org>
Description:
fastqtl - Quantitative Trait Loci (QTL) mapper in cis for molecular phenoty
Closes: 1044949 1049574
Changes:
fastqtl (2.184+v7+dfsg-4) unstable; urgency=medium
.
* d/control: add myself to uploaders.
* d/control: remove redundant ${misc:Depends}.
* d/clean: new: remove leftover artifact. (Closes: #1044949, #1049574)
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Files:
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10601c35208ff07749420778967527e1 7260 science optional fastqtl_2.184+v7+dfsg-4_armhf.buildinfo
e4b708ac16b422eab8c7aeb66df4f963 171592 science optional fastqtl_2.184+v7+dfsg-4_armhf.deb
+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: fastqtl
Binary: fastqtl fastqtl-dbgsym
Architecture: armhf
Version: 2.184+v7+dfsg-4
Checksums-Md5:
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Checksums-Sha256:
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Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Mon, 18 Dec 2023 04:58:11 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
autoconf (= 2.71-3),
automake (= 1:1.16.5-1.3),
autopoint (= 0.21-14),
autotools-dev (= 20220109.1),
base-files (= 13+rpi1),
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bash (= 5.2.15-2),
binutils (= 2.41-6+rpi1),
binutils-arm-linux-gnueabihf (= 2.41-6+rpi1),
binutils-common (= 2.41-6+rpi1),
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diffutils (= 1:3.10-1),
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dpkg-dev (= 1.22.1+rpi1),
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g++ (= 4:13.2.0-1+rpi1),
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gcc (= 4:13.2.0-1+rpi1),
gcc-12 (= 12.3.0-10+rpi1),
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gzip (= 1.12-1),
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libblas3 (= 3.11.0-2),
libblkid1 (= 2.39.3-2),
libboost-dev (= 1.74.0.3+b4),
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libboost-regex1.74-dev (= 1.74.0+ds1-23),
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libbz2-dev (= 1.0.8-5+b2),
libc-bin (= 2.37-12+rpi2),
libc-dev-bin (= 2.37-12+rpi2),
libc6 (= 2.37-12+rpi2),
libc6-dev (= 2.37-12+rpi2),
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libcap2 (= 1:2.66-4),
libcc1-0 (= 13.2.0-5+rpi1),
libcom-err2 (= 1.47.0-2),
libcrypt-dev (= 1:4.4.36-2),
libcrypt1 (= 1:4.4.36-2),
libctf-nobfd0 (= 2.41-6+rpi1),
libctf0 (= 2.41-6+rpi1),
libcurl3-gnutls (= 8.4.0-2+rpi1),
libcurl4-gnutls-dev (= 8.4.0-2+rpi1),
libdb5.3 (= 5.3.28+dfsg2-2),
libdebconfclient0 (= 0.271),
libdebhelper-perl (= 13.11.8),
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libsqlite3-0 (= 3.43.2-1),
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libssl3 (= 3.0.11-1),
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libtool (= 2.4.7-7),
libubsan1 (= 13.2.0-5+rpi1),
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libudev1 (= 254.5-1+rpi1),
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make (= 4.3-4.1),
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perl-modules-5.36 (= 5.36.0-9),
pkg-config (= 1.8.1-1),
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python3-setuptools (= 68.1.2-2),
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r-mathlib (= 4.3.2-1),
readline-common (= 8.2-1.3),
rpcsvc-proto (= 1.4.3-1),
sed (= 4.9-1),
sensible-utils (= 0.0.20),
sysvinit-utils (= 3.08-3),
tar (= 1.34+dfsg-1.2),
tzdata (= 2023c-10),
usr-is-merged (= 37),
util-linux (= 2.39.3-2),
xz-utils (= 5.4.5-0.1),
zlib1g (= 1:1.2.13.dfsg-3),
zlib1g-dev (= 1:1.2.13.dfsg-3)
Environment:
DEB_BUILD_OPTIONS="parallel=4"
LANG="en_GB.UTF-8"
LC_ALL="C.UTF-8"
LC_COLLATE="C.UTF-8"
SOURCE_DATE_EPOCH="1702665068"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
fastqtl-dbgsym_2.184+v7+dfsg-4_armhf.deb
----------------------------------------
new Debian package, version 2.0.
size 5079260 bytes: control archive=540 bytes.
387 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: fastqtl-dbgsym
Source: fastqtl
Version: 2.184+v7+dfsg-4
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 5137
Depends: fastqtl (= 2.184+v7+dfsg-4)
Section: debug
Priority: optional
Description: debug symbols for fastqtl
Build-Ids: f3e18440ee355382282f738cc8f239b4bd801411
drwxr-xr-x root/root 0 2023-12-15 18:31 ./
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/lib/
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/lib/debug/
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/lib/debug/.build-id/f3/
-rw-r--r-- root/root 5249168 2023-12-15 18:31 ./usr/lib/debug/.build-id/f3/e18440ee355382282f738cc8f239b4bd801411.debug
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/share/
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/share/doc/
lrwxrwxrwx root/root 0 2023-12-15 18:31 ./usr/share/doc/fastqtl-dbgsym -> fastqtl
fastqtl_2.184+v7+dfsg-4_armhf.deb
---------------------------------
new Debian package, version 2.0.
size 171592 bytes: control archive=1648 bytes.
1190 bytes, 20 lines control
714 bytes, 11 lines md5sums
261 bytes, 12 lines * postinst #!/bin/sh
374 bytes, 12 lines * prerm #!/bin/sh
Package: fastqtl
Version: 2.184+v7+dfsg-4
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 576
Depends: libblas3 | libblas.so.3, libboost-iostreams1.74.0 (>= 1.74.0+ds1), libboost-program-options1.74.0 (>= 1.74.0+ds1), libc6 (>= 2.34), libgcc-s1 (>= 3.5), libgsl27 (>= 2.7.1), libhts3 (>= 1.17), libstdc++6 (>= 13.1), r-mathlib (>= 4.3.2), python3:any, python3
Recommends: r-cran-qvalue, r-cran-tools, r-cran-argparser
Suggests: fastqtl-doc
Section: science
Priority: optional
Homepage: http://fastqtl.sourceforge.net/
Description: Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes
The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs)
which are significantly associated with various molecular phenotypes
(i.e. expression of known genes, cytosine methylation levels, etc).
It performs scans for all possible phenotype-variant pairs in cis
(i.e. variants located within a specific window around a phenotype).
FastQTL implements a new permutation scheme (Beta approximation) to accurately
and rapidly correct for multiple-testing at both the genotype and phenotype
levels.
drwxr-xr-x root/root 0 2023-12-15 18:31 ./
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/bin/
-rwxr-xr-x root/root 6497 2023-12-15 18:31 ./usr/bin/annotate_outputs.py
-rwxr-xr-x root/root 505356 2023-12-15 18:31 ./usr/bin/fastQTL
-rwxr-xr-x root/root 2968 2023-12-15 18:31 ./usr/bin/merge_chunks.py
-rwxr-xr-x root/root 5981 2023-12-15 18:31 ./usr/bin/run_FastQTL_threaded.py
-rwxr-xr-x root/root 3093 2023-12-15 18:31 ./usr/bin/run_chunk.py
-rwxr-xr-x root/root 1210 2023-12-15 18:31 ./usr/bin/sort_index_pairs.py
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/share/
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/share/doc/
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/share/doc/fastqtl/
-rw-r--r-- root/root 1055 2023-12-15 18:31 ./usr/share/doc/fastqtl/changelog.Debian.gz
-rw-r--r-- root/root 38490 2023-12-15 18:31 ./usr/share/doc/fastqtl/copyright
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/share/fastqtl/
-rw-r--r-- root/root 2607 2017-11-29 03:09 ./usr/share/fastqtl/calculateSignificanceFastQTL.R
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/share/lintian/
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 294 2023-12-15 18:31 ./usr/share/lintian/overrides/fastqtl
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/share/man/
drwxr-xr-x root/root 0 2023-12-15 18:31 ./usr/share/man/man1/
-rw-r--r-- root/root 1573 2023-12-15 18:31 ./usr/share/man/man1/fastQTL.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build Type: any
Build-Space: 104300
Build-Time: 67
Distribution: trixie-staging
Host Architecture: armhf
Install-Time: 70
Job: fastqtl_2.184+v7+dfsg-4
Machine Architecture: arm64
Package: fastqtl
Package-Time: 149
Source-Version: 2.184+v7+dfsg-4
Space: 104300
Status: successful
Version: 2.184+v7+dfsg-4
--------------------------------------------------------------------------------
Finished at 2023-12-18T04:58:11Z
Build needed 00:02:29, 104300k disk space