Raspbian Package Auto-Building

Build log for fastdnaml (1.2.2-15) on armhf

fastdnaml1.2.2-15armhf → 2020-12-08 06:08:35

sbuild (Debian sbuild) 0.78.1 (09 February 2019) on test2019

+==============================================================================+
| fastdnaml 1.2.2-15 (armhf)                   Tue, 08 Dec 2020 06:04:30 +0000 |
+==============================================================================+

Package: fastdnaml
Version: 1.2.2-15
Source Version: 1.2.2-15
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bullseye-staging-armhf-sbuild-67f8b5fc-7d54-4cac-a3b7-6e3657f14cbb' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/fastdnaml-BuwFQH/resolver-IGt7uU' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.9 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
Fetched 24.9 MB in 13s (1881 kB/s)
Reading package lists...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'fastdnaml' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/fastdnaml.git
Please use:
git clone https://salsa.debian.org/med-team/fastdnaml.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 79.9 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main fastdnaml 1.2.2-15 (dsc) [2037 B]
Get:2 http://172.17.0.1/private bullseye-staging/main fastdnaml 1.2.2-15 (tar) [70.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main fastdnaml 1.2.2-15 (diff) [7848 B]
Fetched 79.9 kB in 0s (429 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/fastdnaml-BuwFQH/fastdnaml-1.2.2' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/fastdnaml-BuwFQH' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [957 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [370 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [452 B]
Fetched 1779 B in 0s (46.6 kB/s)
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils debhelper
  dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
  groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl
  libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc
  libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0
  libxml2 m4 man-db po-debconf sensible-utils
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
  libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
  | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
  libmail-box-perl
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
  xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils debhelper
  dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
  groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl
  libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc
  libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0
  libxml2 m4 man-db po-debconf sbuild-build-depends-main-dummy sensible-utils
0 upgraded, 34 newly installed, 0 to remove and 56 not upgraded.
Need to get 18.6 MB of archives.
After this operation, 68.4 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [872 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf bsdextrautils armhf 2.36.1-2 [133 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.2.1 [188 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-1 [162 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.3-2 [1178 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-4 [8289 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.3 [580 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2.1 [1007 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 18.6 MB in 4s (4399 kB/s)
Selecting previously unselected package bsdextrautils.
(Reading database ... 12445 files and directories currently installed.)
Preparing to unpack .../00-bsdextrautils_2.36.1-2_armhf.deb ...
Unpacking bsdextrautils (2.36.1-2) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../02-groff-base_1.22.4-5_armhf.deb ...
Unpacking groff-base (1.22.4-5) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.3-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../04-man-db_2.9.3-2_armhf.deb ...
Unpacking man-db (2.9.3-2) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../05-sensible-utils_0.0.12+nmu1_all.deb ...
Unpacking sensible-utils (0.0.12+nmu1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../06-libmagic-mgc_1%3a5.38-5_armhf.deb ...
Unpacking libmagic-mgc (1:5.38-5) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../07-libmagic1_1%3a5.38-5_armhf.deb ...
Unpacking libmagic1:armhf (1:5.38-5) ...
Selecting previously unselected package file.
Preparing to unpack .../08-file_1%3a5.38-5_armhf.deb ...
Unpacking file (1:5.38-5) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../09-gettext-base_0.19.8.1-10_armhf.deb ...
Unpacking gettext-base (0.19.8.1-10) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../10-libsigsegv2_2.12-2_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../11-m4_1.4.18-4_armhf.deb ...
Unpacking m4 (1.4.18-4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../12-autoconf_2.69-11.1_all.deb ...
Unpacking autoconf (2.69-11.1) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../13-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../14-automake_1%3a1.16.2-4_all.deb ...
Unpacking automake (1:1.16.2-4) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../15-autopoint_0.19.8.1-10_all.deb ...
Unpacking autopoint (0.19.8.1-10) ...
Selecting previously unselected package libtool.
Preparing to unpack .../16-libtool_2.4.6-14_all.deb ...
Unpacking libtool (2.4.6-14) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../17-dh-autoreconf_19_all.deb ...
Unpacking dh-autoreconf (19) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../18-libdebhelper-perl_13.2.1_all.deb ...
Unpacking libdebhelper-perl (13.2.1) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../20-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.9.0-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.9.0-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../22-dh-strip-nondeterminism_1.9.0-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.9.0-1) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../23-libelf1_0.182-1_armhf.deb ...
Unpacking libelf1:armhf (0.182-1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../24-dwz_0.13-5_armhf.deb ...
Unpacking dwz (0.13-5) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../25-libglib2.0-0_2.66.3-2_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.66.3-2) ...
Selecting previously unselected package libicu67:armhf.
Preparing to unpack .../26-libicu67_67.1-4_armhf.deb ...
Unpacking libicu67:armhf (67.1-4) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../27-libxml2_2.9.10+dfsg-6.3_armhf.deb ...
Unpacking libxml2:armhf (2.9.10+dfsg-6.3) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../28-libcroco3_0.6.13-1_armhf.deb ...
Unpacking libcroco3:armhf (0.6.13-1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../29-gettext_0.19.8.1-10_armhf.deb ...
Unpacking gettext (0.19.8.1-10) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../30-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../31-po-debconf_1.0.21_all.deb ...
Unpacking po-debconf (1.0.21) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../32-debhelper_13.2.1_all.deb ...
Unpacking debhelper (13.2.1) ...
Selecting previously unselected package sbuild-build-depends-main-dummy.
Preparing to unpack .../33-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up bsdextrautils (2.36.1-2) ...
update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode
Setting up libicu67:armhf (67.1-4) ...
Setting up libmagic-mgc (1:5.38-5) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.66.3-2) ...
No schema files found: doing nothing.
Setting up libdebhelper-perl (13.2.1) ...
Setting up libmagic1:armhf (1:5.38-5) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up file (1:5.38-5) ...
Setting up autotools-dev (20180224.1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libelf1:armhf (0.182-1) ...
Setting up libxml2:armhf (2.9.10+dfsg-6.3) ...
Setting up libfile-stripnondeterminism-perl (1.9.0-1) ...
Setting up libtool (2.4.6-14) ...
Setting up m4 (1.4.18-4) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up gettext (0.19.8.1-10) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up po-debconf (1.0.21) ...
Setting up debhelper (13.2.1) ...
Setting up dh-autoreconf (19) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-4+rpi1) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.19.20-v7+ #1 SMP Mon Mar 18 11:37:02 GMT 2019 armhf (armv7l)
Toolchain package versions: binutils_2.35.1-2+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.0-16+rpi1 gcc-10_10.2.0-16+rpi1 libc6-dev_2.31-4+rpi1 libstdc++-10-dev_10.2.0-16+rpi1 libstdc++6_10.2.0-16+rpi1 linux-libc-dev_5.7.10-1+rpi1
Package versions: adduser_3.118 apt_2.1.11 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1~rc2-1 binutils_2.35.1-2+rpi1 binutils-arm-linux-gnueabihf_2.35.1-2+rpi1 binutils-common_2.35.1-2+rpi1 bsdextrautils_2.36.1-2 bsdutils_1:2.36-3 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.0-16+rpi1 dash_0.5.11+git20200708+dd9ef66-2 debconf_1.5.74 debhelper_13.2.1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1 file_1:5.38-5 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1+rpi1 g++-10_10.2.0-16+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.0-16+rpi1 gcc-10-base_10.2.0-16+rpi1 gcc-7-base_7.5.0-6+rpi1+b1 gcc-8-base_8.4.0-4+rpi1+b1 gcc-9-base_9.3.0-18+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg6.0_2.1.11 libarchive-zip-perl_1.68-1 libasan6_10.2.0-16+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-16+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1 libbinutils_2.35.1-2+rpi1 libblkid1_2.36-3 libbz2-1.0_1.0.8-4 libc-bin_2.31-4+rpi1 libc-dev-bin_2.31-4+rpi1 libc6_2.31-4+rpi1 libc6-dev_2.31-4+rpi1 libcap-ng0_0.7.9-2.2 libcc1-0_10.2.0-16+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-2+rpi1 libctf0_2.35.1-2+rpi1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.2.1 libdpkg-perl_1.20.5+rpi1 libelf1_0.182-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1 libffi7_3.3-5 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.0-16+rpi1 libgcc-s1_10.2.0-16+rpi1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.3-2 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-4 libgomp1_10.2.0-16+rpi1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10+b3 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-3 libisl22_0.22.1-1 libk5crypto3_1.17-10+b3 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10+b3 libkrb5support0_1.17-10+b3 libksba8_1.4.0-2 libldap-2.4-2_2.4.56+dfsg-1+rpi1+b1 liblocale-gettext-perl_1.07-4+b1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncursesw6_6.2+20200918-1 libnettle8_3.6-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libreadline8_8.1~rc2-2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3+rpi1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36-3 libsqlite3-0_3.33.0-1 libss2_1.45.6-1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.0-16+rpi1 libstdc++6_10.2.0-16+rpi1 libsub-override-perl_0.09-2 libsystemd0_246.6-2+rpi1 libtasn1-6_4.16.0-2 libtext-iconv-perl_1.7-7+b1 libtinfo6_6.2+20200918-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libubsan1_10.2.0-16+rpi1 libuchardet0_0.0.7-1 libudev1_246.6-2+rpi1 libunistring2_0.9.10-4 libuuid1_2.36-3 libxml2_2.9.10+dfsg-6.3 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.7.10-1+rpi1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-3 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4 po-debconf_1.0.21 raspbian-archive-keyring_20120528.2 readline-common_8.1~rc2-2 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 tzdata_2020d-1 util-linux_2.36-3 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 3.0 (quilt)
Source: fastdnaml
Binary: fastdnaml
Architecture: any
Version: 1.2.2-15
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>, Charles Plessy <plessy@debian.org>
Homepage: ftp://ftp.bio.indiana.edu/molbio/evolve/fastdnaml/fastDNAml.html
Standards-Version: 4.5.1
Vcs-Browser: https://salsa.debian.org/med-team/fastdnaml
Vcs-Git: https://salsa.debian.org/med-team/fastdnaml.git
Testsuite: autopkgtest
Build-Depends: debhelper-compat (= 13)
Package-List:
 fastdnaml deb science optional arch=any
Checksums-Sha1:
 78197cbd760163f65085ac80c36d4286a1f29e34 70005 fastdnaml_1.2.2.orig.tar.gz
 69d8758531b599fca477f82d26f963722d045018 7848 fastdnaml_1.2.2-15.debian.tar.xz
Checksums-Sha256:
 34690ec9a8e2fe1d86bea4a7cb10f7bc47e5e4c30719e1c9451210df4f160180 70005 fastdnaml_1.2.2.orig.tar.gz
 63cca554d57e0ce0982b5b45de1955766d0986b6cc17de488fbd982c66b93f3e 7848 fastdnaml_1.2.2-15.debian.tar.xz
Files:
 dd9c737e0f433879500391d0e229f763 70005 fastdnaml_1.2.2.orig.tar.gz
 9b78e45a6d97335e6a86c9fa29a30f22 7848 fastdnaml_1.2.2-15.debian.tar.xz

-----BEGIN PGP SIGNATURE-----
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=+ve4
-----END PGP SIGNATURE-----

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.DND8Od92/trustedkeys.kbx': General error
gpgv: Signature made Sat Dec  5 10:57:47 2020 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./fastdnaml_1.2.2-15.dsc
dpkg-source: info: extracting fastdnaml in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking fastdnaml_1.2.2.orig.tar.gz
dpkg-source: info: unpacking fastdnaml_1.2.2-15.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying Makefile.patch
dpkg-source: info: applying scripts.patch
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying cross.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/112/bus
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INVOCATION_ID=1ec3ff19654148fab3a02153247d5928
JOURNAL_STREAM=8:145870
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=117
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-67f8b5fc-7d54-4cac-a3b7-6e3657f14cbb
SCHROOT_UID=112
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
XDG_RUNTIME_DIR=/run/user/112
XDG_SESSION_CLASS=background
XDG_SESSION_ID=c45892
XDG_SESSION_TYPE=unspecified

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage -us -uc -mRaspbian pi4 based autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package fastdnaml
dpkg-buildpackage: info: source version 1.2.2-15
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean
   dh_auto_clean
	make -j4 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd source; rm -f *.o fastDNAml)
rm -rf tests
rm -f checkpoint.*
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_clean
rm -fr source/fastDNAml
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
 debian/rules binary-arch
dh binary-arch
   dh_update_autotools_config -a
   dh_autoreconf -a
   dh_auto_configure -a
   dh_auto_build -a
	make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cd source && cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security fastDNAml.c  -o fastDNAml -lm -Wl,-z,relro -Wl,-z,now
In file included from fastDNAml.c:207:
fastDNAml.h:222:10: warning: conflicting types for built-in function ‘malloc’; expected ‘void *(unsigned int)’ [-Wbuiltin-declaration-mismatch]
  222 |    char *malloc();
      |          ^~~~~~
fastDNAml.h:1:1: note: ‘malloc’ is declared in header ‘<stdlib.h>’
  +++ |+#include <stdlib.h>
    1 | /*  fastDNAml.h  */
fastDNAml.c: In function ‘freeTopol’:
fastDNAml.h:228:28: warning: implicit declaration of function ‘free’ [-Wimplicit-function-declaration]
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:342:5: note: in expansion of macro ‘Free’
  342 |     Free(tpl->links);
      |     ^~~~
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:342:5: note: in expansion of macro ‘Free’
  342 |     Free(tpl->links);
      |     ^~~~
fastDNAml.c:208:1: note: include ‘<stdlib.h>’ or provide a declaration of ‘free’
  207 | #include "fastDNAml.h"  /*  Requires version 1.2  */
  +++ |+#include <stdlib.h>
  208 | 
In file included from fastDNAml.c:207:
fastDNAml.c: In function ‘freeTreeNode’:
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:1533:23: note: in expansion of macro ‘Free’
 1533 |         if (p->x->lv) Free(p->x->lv);
      |                       ^~~~
fastDNAml.h:228:28: note: include ‘<stdlib.h>’ or provide a declaration of ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:1533:23: note: in expansion of macro ‘Free’
 1533 |         if (p->x->lv) Free(p->x->lv);
      |                       ^~~~
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:1534:9: note: in expansion of macro ‘Free’
 1534 |         Free(p->x);
      |         ^~~~
fastDNAml.h:228:28: note: include ‘<stdlib.h>’ or provide a declaration of ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:1534:9: note: in expansion of macro ‘Free’
 1534 |         Free(p->x);
      |         ^~~~
fastDNAml.c: In function ‘freeTree’:
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:1560:5: note: in expansion of macro ‘Free’
 1560 |     Free(tr->nodep[1]);       /* Free the actual nodes */
      |     ^~~~
fastDNAml.h:228:28: note: include ‘<stdlib.h>’ or provide a declaration of ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:1560:5: note: in expansion of macro ‘Free’
 1560 |     Free(tr->nodep[1]);       /* Free the actual nodes */
      |     ^~~~
fastDNAml.c: In function ‘setupxarray’:
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:2028:9: note: in expansion of macro ‘Free’
 2028 |         Free(x);
      |         ^~~~
fastDNAml.h:228:28: note: include ‘<stdlib.h>’ or provide a declaration of ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:2028:9: note: in expansion of macro ‘Free’
 2028 |         Free(x);
      |         ^~~~
fastDNAml.c: In function ‘makenewz’:
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:2604:5: note: in expansion of macro ‘Free’
 2604 |     Free(abi);
      |     ^~~~
fastDNAml.h:228:28: note: include ‘<stdlib.h>’ or provide a declaration of ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:2604:5: note: in expansion of macro ‘Free’
 2604 |     Free(abi);
      |     ^~~~
fastDNAml.c: In function ‘readKeyValue’:
fastDNAml.c:2886:15: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration]
 2886 |     string += strlen(key);
      |               ^~~~~~
fastDNAml.c:2886:15: warning: incompatible implicit declaration of built-in function ‘strlen’
fastDNAml.c:208:1: note: include ‘<string.h>’ or provide a declaration of ‘strlen’
  207 | #include "fastDNAml.h"  /*  Requires version 1.2  */
  +++ |+#include <string.h>
  208 | 
fastDNAml.c: In function ‘fopen_pid’:
fastDNAml.c:3231:47: warning: implicit declaration of function ‘getpid’ [-Wimplicit-function-declaration]
 3231 |     (void) sprintf(name_pid, "%s.%d", filenm, getpid());
      |                                               ^~~~~~
In file included from fastDNAml.c:207:
fastDNAml.c: In function ‘treeOut’:
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:3683:5: note: in expansion of macro ‘Free’
 3683 |     Free(treestr);
      |     ^~~~
fastDNAml.h:228:28: note: include ‘<stdlib.h>’ or provide a declaration of ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:3683:5: note: in expansion of macro ‘Free’
 3683 |     Free(treestr);
      |     ^~~~
fastDNAml.c: In function ‘cmpBestTrees’:
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:4535:5: note: in expansion of macro ‘Free’
 4535 |     Free(log_f0);
      |     ^~~~
fastDNAml.h:228:28: note: include ‘<stdlib.h>’ or provide a declaration of ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:4535:5: note: in expansion of macro ‘Free’
 4535 |     Free(log_f0);
      |     ^~~~
fastDNAml.c: In function ‘makeDenovoTree’:
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:4765:5: note: in expansion of macro ‘Free’
 4765 |     Free(enterorder);
      |     ^~~~
fastDNAml.h:228:28: note: include ‘<stdlib.h>’ or provide a declaration of ‘free’
  228 | #define    Free(x)  (void) free((char *) (x))    /* BSD */
      |                            ^~~~
fastDNAml.c:4765:5: note: in expansion of macro ‘Free’
 4765 |     Free(enterorder);
      |     ^~~~
fastDNAml.c: At top level:
fastDNAml.c:4775:3: warning: return type defaults to ‘int’ [-Wimplicit-int]
 4775 |   main ()
      |   ^~~~
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_test -a
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a
   dh_prep -a
   dh_installdirs -a
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# do nothing
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
cp -a docs/fastDNAml_doc_1.2.txt `pwd`/debian/`dh_listpackages`/usr/share/`dh_listpackages`/fastdnaml_help
# the scripts have to be executable thus mentioning these in debian/install is not enough
cp -a scripts/*                  `pwd`/debian/`dh_listpackages`/usr/lib/`dh_listpackages`/bin
chmod 755 `pwd`/debian/`dh_listpackages`/usr/lib/`dh_listpackages`/bin/*
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a
   dh_installchangelogs -a
   dh_installexamples -a
   dh_installman -a
   dh_installmenu -a
   dh_perl -a
   dh_link -a
   dh_strip_nondeterminism -a
   dh_compress -a
   dh_fixperms -a
   dh_missing -a
   dh_dwz -a -a
   dh_strip -a -a
   dh_makeshlibs -a -a
   dh_shlibdeps -a -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/fastdnaml/usr/bin/fastDNAml was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
   dh_installdeb -a
   dh_gencontrol -a
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package 'fastdnaml' in '../fastdnaml_1.2.2-15_armhf.deb'.
dpkg-deb: building package 'fastdnaml-dbgsym' in '../fastdnaml-dbgsym_1.2.2-15_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian pi4 based autobuilder <root@raspbian.org> >../fastdnaml_1.2.2-15_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-12-08T06:08:29Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


fastdnaml_1.2.2-15_armhf.changes:
---------------------------------

Format: 1.8
Date: Sat, 05 Dec 2020 11:52:15 +0100
Source: fastdnaml
Binary: fastdnaml fastdnaml-dbgsym
Architecture: armhf
Version: 1.2.2-15
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian pi4 based autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 fastdnaml  - Tool for construction of phylogenetic trees of DNA sequences
Changes:
 fastdnaml (1.2.2-15) unstable; urgency=medium
 .
   * Standards-Version: 4.5.1 (routine-update)
   * debhelper-compat 13 (routine-update)
   * Add salsa-ci file (routine-update)
   * Rules-Requires-Root: no (routine-update)
Checksums-Sha1:
 d8832f25bf9641adcb4368e900a5b3cd7f31f7f1 72384 fastdnaml-dbgsym_1.2.2-15_armhf.deb
 0db0454d263b8cb10b135ce395dac19fddace137 5008 fastdnaml_1.2.2-15_armhf.buildinfo
 6db1c76db957f5fb7c6f0a877e8dd2c640ab9457 54860 fastdnaml_1.2.2-15_armhf.deb
Checksums-Sha256:
 e8846f4a37de47c4d944cee6dae642e684105f655b8efeaba1c50baa3c06cd27 72384 fastdnaml-dbgsym_1.2.2-15_armhf.deb
 19da71f09ef54b68a73e028877699580971649d412683b5faddfcc804130d057 5008 fastdnaml_1.2.2-15_armhf.buildinfo
 b4da5db6ae4c85fdf4022ab308d71bd718b765151b346b640b4f7875a88620ad 54860 fastdnaml_1.2.2-15_armhf.deb
Files:
 a5291b5fc015acb40a6726a042d3280c 72384 debug optional fastdnaml-dbgsym_1.2.2-15_armhf.deb
 346ec9e93fe258c748282f0efb90fec8 5008 science optional fastdnaml_1.2.2-15_armhf.buildinfo
 5cb4fa9b498e746adccf2556cae010a5 54860 science optional fastdnaml_1.2.2-15_armhf.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: fastdnaml
Binary: fastdnaml fastdnaml-dbgsym
Architecture: armhf
Version: 1.2.2-15
Checksums-Md5:
 a5291b5fc015acb40a6726a042d3280c 72384 fastdnaml-dbgsym_1.2.2-15_armhf.deb
 5cb4fa9b498e746adccf2556cae010a5 54860 fastdnaml_1.2.2-15_armhf.deb
Checksums-Sha1:
 d8832f25bf9641adcb4368e900a5b3cd7f31f7f1 72384 fastdnaml-dbgsym_1.2.2-15_armhf.deb
 6db1c76db957f5fb7c6f0a877e8dd2c640ab9457 54860 fastdnaml_1.2.2-15_armhf.deb
Checksums-Sha256:
 e8846f4a37de47c4d944cee6dae642e684105f655b8efeaba1c50baa3c06cd27 72384 fastdnaml-dbgsym_1.2.2-15_armhf.deb
 b4da5db6ae4c85fdf4022ab308d71bd718b765151b346b640b4f7875a88620ad 54860 fastdnaml_1.2.2-15_armhf.deb
Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Tue, 08 Dec 2020 06:08:28 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
 autoconf (= 2.69-11.1),
 automake (= 1:1.16.2-4),
 autopoint (= 0.19.8.1-10),
 autotools-dev (= 20180224.1),
 base-files (= 11+rpi1),
 base-passwd (= 3.5.48),
 bash (= 5.1~rc2-1),
 binutils (= 2.35.1-2+rpi1),
 binutils-arm-linux-gnueabihf (= 2.35.1-2+rpi1),
 binutils-common (= 2.35.1-2+rpi1),
 bsdextrautils (= 2.36.1-2),
 bsdutils (= 1:2.36-3),
 build-essential (= 12.8),
 bzip2 (= 1.0.8-4),
 coreutils (= 8.32-4),
 cpp (= 4:10.2.0-1+rpi1),
 cpp-10 (= 10.2.0-16+rpi1),
 dash (= 0.5.11+git20200708+dd9ef66-2),
 debconf (= 1.5.74),
 debhelper (= 13.2.1),
 debianutils (= 4.11.2),
 dh-autoreconf (= 19),
 dh-strip-nondeterminism (= 1.9.0-1),
 diffutils (= 1:3.7-3),
 dpkg (= 1.20.5+rpi1),
 dpkg-dev (= 1.20.5+rpi1),
 dwz (= 0.13-5),
 file (= 1:5.38-5),
 findutils (= 4.7.0+git20201010-2),
 g++ (= 4:10.2.0-1+rpi1),
 g++-10 (= 10.2.0-16+rpi1),
 gcc (= 4:10.2.0-1+rpi1),
 gcc-10 (= 10.2.0-16+rpi1),
 gcc-10-base (= 10.2.0-16+rpi1),
 gettext (= 0.19.8.1-10),
 gettext-base (= 0.19.8.1-10),
 grep (= 3.6-1),
 groff-base (= 1.22.4-5),
 gzip (= 1.10-2),
 hostname (= 3.23),
 init-system-helpers (= 1.58),
 intltool-debian (= 0.35.0+20060710.5),
 libacl1 (= 2.2.53-8),
 libarchive-zip-perl (= 1.68-1),
 libasan6 (= 10.2.0-16+rpi1),
 libatomic1 (= 10.2.0-16+rpi1),
 libattr1 (= 1:2.4.48-5),
 libaudit-common (= 1:2.8.5-3.1),
 libaudit1 (= 1:2.8.5-3.1),
 libbinutils (= 2.35.1-2+rpi1),
 libblkid1 (= 2.36-3),
 libbz2-1.0 (= 1.0.8-4),
 libc-bin (= 2.31-4+rpi1),
 libc-dev-bin (= 2.31-4+rpi1),
 libc6 (= 2.31-4+rpi1),
 libc6-dev (= 2.31-4+rpi1),
 libcap-ng0 (= 0.7.9-2.2),
 libcc1-0 (= 10.2.0-16+rpi1),
 libcom-err2 (= 1.45.6-1),
 libcroco3 (= 0.6.13-1),
 libcrypt-dev (= 1:4.4.17-1),
 libcrypt1 (= 1:4.4.17-1),
 libctf-nobfd0 (= 2.35.1-2+rpi1),
 libctf0 (= 2.35.1-2+rpi1),
 libdb5.3 (= 5.3.28+dfsg1-0.6),
 libdebconfclient0 (= 0.255),
 libdebhelper-perl (= 13.2.1),
 libdpkg-perl (= 1.20.5+rpi1),
 libelf1 (= 0.182-1),
 libffi7 (= 3.3-5),
 libfile-stripnondeterminism-perl (= 1.9.0-1),
 libgcc-10-dev (= 10.2.0-16+rpi1),
 libgcc-s1 (= 10.2.0-16+rpi1),
 libgcrypt20 (= 1.8.7-2),
 libgdbm-compat4 (= 1.18.1-5.1),
 libgdbm6 (= 1.18.1-5.1),
 libglib2.0-0 (= 2.66.3-2),
 libgmp10 (= 2:6.2.0+dfsg-6),
 libgomp1 (= 10.2.0-16+rpi1),
 libgpg-error0 (= 1.38-2),
 libgssapi-krb5-2 (= 1.17-10+b3),
 libicu67 (= 67.1-4),
 libisl22 (= 0.22.1-1),
 libk5crypto3 (= 1.17-10+b3),
 libkeyutils1 (= 1.6.1-2),
 libkrb5-3 (= 1.17-10+b3),
 libkrb5support0 (= 1.17-10+b3),
 liblz4-1 (= 1.9.2-2),
 liblzma5 (= 5.2.4-1),
 libmagic-mgc (= 1:5.38-5),
 libmagic1 (= 1:5.38-5),
 libmount1 (= 2.36-3),
 libmpc3 (= 1.2.0-1),
 libmpfr6 (= 4.1.0-3),
 libnsl-dev (= 1.3.0-2),
 libnsl2 (= 1.3.0-2),
 libnss-nis (= 3.1-4),
 libnss-nisplus (= 1.3-4),
 libpam-modules (= 1.3.1-5),
 libpam-modules-bin (= 1.3.1-5),
 libpam-runtime (= 1.3.1-5),
 libpam0g (= 1.3.1-5),
 libpcre2-8-0 (= 10.34-7),
 libpcre3 (= 2:8.39-13),
 libperl5.32 (= 5.32.0-5),
 libpipeline1 (= 1.5.3-1),
 libseccomp2 (= 2.5.0-3+rpi1),
 libselinux1 (= 3.1-2),
 libsigsegv2 (= 2.12-2),
 libsmartcols1 (= 2.36-3),
 libssl1.1 (= 1.1.1h-1),
 libstdc++-10-dev (= 10.2.0-16+rpi1),
 libstdc++6 (= 10.2.0-16+rpi1),
 libsub-override-perl (= 0.09-2),
 libsystemd0 (= 246.6-2+rpi1),
 libtinfo6 (= 6.2+20200918-1),
 libtirpc-common (= 1.2.6-3),
 libtirpc-dev (= 1.2.6-3),
 libtirpc3 (= 1.2.6-3),
 libtool (= 2.4.6-14),
 libubsan1 (= 10.2.0-16+rpi1),
 libuchardet0 (= 0.0.7-1),
 libudev1 (= 246.6-2+rpi1),
 libunistring2 (= 0.9.10-4),
 libuuid1 (= 2.36-3),
 libxml2 (= 2.9.10+dfsg-6.3),
 libzstd1 (= 1.4.5+dfsg-4+rpi1),
 linux-libc-dev (= 5.7.10-1+rpi1),
 login (= 1:4.8.1-1),
 lsb-base (= 11.1.0+rpi1),
 m4 (= 1.4.18-4),
 make (= 4.3-4),
 man-db (= 2.9.3-2),
 mawk (= 1.3.4.20200120-2),
 ncurses-base (= 6.2+20200918-1),
 ncurses-bin (= 6.2+20200918-1),
 patch (= 2.7.6-6),
 perl (= 5.32.0-5),
 perl-base (= 5.32.0-5),
 perl-modules-5.32 (= 5.32.0-5),
 po-debconf (= 1.0.21),
 sed (= 4.7-1),
 sensible-utils (= 0.0.12+nmu1),
 sysvinit-utils (= 2.96-5),
 tar (= 1.30+dfsg-7),
 util-linux (= 2.36-3),
 xz-utils (= 5.2.4-1),
 zlib1g (= 1:1.2.11.dfsg-2)
Environment:
 DEB_BUILD_OPTIONS="parallel=4"
 LANG="en_GB.UTF-8"
 LC_ALL="C.UTF-8"
 SOURCE_DATE_EPOCH="1607165535"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


fastdnaml-dbgsym_1.2.2-15_armhf.deb
-----------------------------------

 new Debian package, version 2.0.
 size 72384 bytes: control archive=536 bytes.
     379 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: fastdnaml-dbgsym
 Source: fastdnaml
 Version: 1.2.2-15
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 87
 Depends: fastdnaml (= 1.2.2-15)
 Section: debug
 Priority: optional
 Description: debug symbols for fastdnaml
 Build-Ids: 72fed7b12945583d66f6d8a7fec0b79f9d241102

drwxr-xr-x root/root         0 2020-12-05 10:52 ./
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/lib/
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/lib/debug/.build-id/72/
-rw-r--r-- root/root     78784 2020-12-05 10:52 ./usr/lib/debug/.build-id/72/fed7b12945583d66f6d8a7fec0b79f9d241102.debug
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-12-05 10:52 ./usr/share/doc/fastdnaml-dbgsym -> fastdnaml


fastdnaml_1.2.2-15_armhf.deb
----------------------------

 new Debian package, version 2.0.
 size 54860 bytes: control archive=2884 bytes.
     979 bytes,    22 lines      control              
    5171 bytes,    72 lines      md5sums              
     192 bytes,     7 lines   *  postinst             #!/bin/sh
     167 bytes,     5 lines   *  postrm               #!/bin/sh
 Package: fastdnaml
 Version: 1.2.2-15
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 225
 Depends: libc6 (>= 2.29)
 Suggests: phylip
 Section: science
 Priority: optional
 Homepage: ftp://ftp.bio.indiana.edu/molbio/evolve/fastdnaml/fastDNAml.html
 Description: Tool for construction of phylogenetic trees of DNA sequences
  fastDNAml is a program derived from Joseph Felsenstein's version 3.3 DNAML
  (part of his PHYLIP package).  Users should consult the documentation for
  DNAML before using this program.
  .
  fastDNAml is an attempt to solve the same problem as DNAML, but to do so
  faster and using less memory, so that larger trees and/or more bootstrap
  replicates become tractable.  Much of fastDNAml is merely a recoding of the
  PHYLIP 3.3 DNAML program from PASCAL to C.
  .
  Note that the homepage of this program is not available any more and so
  this program will probably not see any further updates.

drwxr-xr-x root/root         0 2020-12-05 10:52 ./
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/bin/
-rwxr-xr-x root/root     50660 2020-12-05 10:52 ./usr/bin/fastDNAml
-rwxr-xr-x root/root       420 2020-12-05 10:52 ./usr/bin/fastDNAml-util
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/lib/
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/lib/fastdnaml/
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/lib/fastdnaml/bin/
-rwxr-xr-x root/root       857 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/ae2dnaml
-rwxr-xr-x root/root       216 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/bootstrap
-rwxr-xr-x root/root       163 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/categories
-rwxr-xr-x root/root       140 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/categories_file
-rwxr-xr-x root/root       179 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/checkpoint_summary
-rwxr-xr-x root/root       145 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/clean_checkpoints
-rwxr-xr-x root/root      3504 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/clean_jumbles
-rwxr-xr-x root/root       183 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/dnaml_progress
-rwxr-xr-x root/root      6087 2020-12-05 10:52 ./usr/lib/fastdnaml/bin/fastDNAml_boot
-rwxr-xr-x root/root      3779 2020-12-05 10:52 ./usr/lib/fastdnaml/bin/fastDNAml_loop
-rwxr-xr-x root/root       225 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/frequencies
-rwxr-xr-x root/root       267 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/global
-rwxr-xr-x root/root      1369 2020-12-05 10:52 ./usr/lib/fastdnaml/bin/iterate_rates
-rwxr-xr-x root/root       213 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/jumble
-rwxr-xr-x root/root       172 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/min_info
-rwxr-xr-x root/root       172 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/n_categories
-rwxr-xr-x root/root       124 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/n_files
-rwxr-xr-x root/root       759 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/out.PID
-rwxr-xr-x root/root       162 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/outgroup
-rwxr-xr-x root/root       134 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/printdata
-rwxr-xr-x root/root       133 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/quickadd
-rwxr-xr-x root/root       688 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/restart
-rwxr-xr-x root/root       107 2020-12-05 10:52 ./usr/lib/fastdnaml/bin/scores
-rwxr-xr-x root/root       174 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/transition
-rwxr-xr-x root/root       272 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/treefile
-rwxr-xr-x root/root        75 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/treefile2prolog
-rwxr-xr-x root/root       370 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/trees2NEXUS
-rwxr-xr-x root/root        72 2020-12-05 10:52 ./usr/lib/fastdnaml/bin/trees2prolog
-rwxr-xr-x root/root       136 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/userlengths
-rwxr-xr-x root/root       270 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/usertree
-rwxr-xr-x root/root       270 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/usertrees
-rwxr-xr-x root/root       161 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/weights
-rwxr-xr-x root/root       187 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/weights_categories
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/doc-base/
-rw-r--r-- root/root       350 2020-12-05 10:52 ./usr/share/doc-base/fastdnaml
-rw-r--r-- root/root       526 2020-12-05 10:52 ./usr/share/doc-base/fastdnaml-scripts
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/doc/fastdnaml/
-rw-r--r-- root/root       619 2020-12-05 10:52 ./usr/share/doc/fastdnaml/README.Debian
-rw-r--r-- root/root       119 2020-12-05 10:52 ./usr/share/doc/fastdnaml/README.test
-rw-r--r-- root/root      2543 2020-12-05 10:52 ./usr/share/doc/fastdnaml/changelog.Debian.gz
-rw-r--r-- root/root      1273 2020-12-05 10:52 ./usr/share/doc/fastdnaml/copyright
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/doc/fastdnaml/examples/
-rw-r--r-- root/root      2139 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5.out
-rw-r--r-- root/root       708 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5.phy
-rw-r--r-- root/root      2189 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5B.out
-rw-r--r-- root/root       717 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5B.phy
-rw-r--r-- root/root      2554 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5C.out
-rw-r--r-- root/root       903 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5C.phy
-rw-r--r-- root/root      2092 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5GRT.out
-rw-r--r-- root/root       796 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5GRT.phy
-rw-r--r-- root/root      2139 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I.out
-rw-r--r-- root/root       710 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I.phy
-rw-r--r-- root/root      2139 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I2.out
-rw-r--r-- root/root       800 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I2.phy
-rw-r--r-- root/root      2172 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5J.out
-rw-r--r-- root/root       717 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5J.phy
-rw-r--r-- root/root      2370 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5R.out
-rw-r--r-- root/root       780 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5R.phy
-rw-r--r-- root/root      2161 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5TF.out
-rw-r--r-- root/root       743 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5TF.phy
-rw-r--r-- root/root      5541 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5U.out
-rw-r--r-- root/root       941 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5U.phy
-rw-r--r-- root/root      2157 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5W.out
-rw-r--r-- root/root       851 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5W.phy
-rw-r--r-- root/root      2503 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5WC.out
-rw-r--r-- root/root      1045 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5WC.phy
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/doc/fastdnaml/examples/tests/
-rw-r--r-- root/root       715 2020-12-05 10:52 ./usr/share/doc/fastdnaml/examples/tests/Makefile
-rw-r--r-- root/root        27 2020-12-05 10:52 ./usr/share/doc/fastdnaml/examples/tests/control
-rw-r--r-- root/root      1246 2020-12-05 10:52 ./usr/share/doc/fastdnaml/examples/tests/fastdnaml.data
lrwxrwxrwx root/root         0 2020-12-05 10:52 ./usr/share/doc/fastdnaml/fastDNAml_doc_1.2.txt -> ../../fastdnaml/fastdnaml_help
-rw-r--r-- root/root      6980 2000-01-03 15:58 ./usr/share/doc/fastdnaml/fastDNAml_scripts.txt.gz
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/fastdnaml/
-rw-r--r-- root/root     34150 2000-01-03 15:58 ./usr/share/fastdnaml/fastdnaml_help
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/man/
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/man/man1/
lrwxrwxrwx root/root         0 2020-12-05 10:52 ./usr/share/man/man1/fastDNAml-util.1.gz -> fastDNAml.1.gz
-rw-r--r-- root/root       742 2020-12-05 10:52 ./usr/share/man/man1/fastDNAml.1.gz
drwxr-xr-x root/root         0 2020-12-05 10:52 ./usr/share/menu/
-rw-r--r-- root/root       191 2020-12-05 10:52 ./usr/share/menu/fastdnaml


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build Type: any
Build-Space: 1552
Build-Time: 21
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 191
Job: fastdnaml_1.2.2-15
Machine Architecture: armhf
Package: fastdnaml
Package-Time: 239
Source-Version: 1.2.2-15
Space: 1552
Status: successful
Version: 1.2.2-15
--------------------------------------------------------------------------------
Finished at 2020-12-08T06:08:29Z
Build needed 00:03:59, 1552k disk space