Raspbian Package Auto-Building

Build log for fastdnaml (1.2.2-14) on armhf

fastdnaml1.2.2-14armhf → 2019-05-13 04:46:45

sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on test2019

+==============================================================================+
| fastdnaml 1.2.2-14 (armhf)                   Mon, 13 May 2019 04:41:57 +0000 |
+==============================================================================+

Package: fastdnaml
Version: 1.2.2-14
Source Version: 1.2.2-14
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/buster-staging-armhf-sbuild-7ecdbb32-f9ea-41ea-b536-17046186b40d' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.4 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.0 MB]
Fetched 24.3 MB in 13s (1843 kB/s)
Reading package lists...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'fastdnaml' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/fastdnaml.git
Please use:
git clone https://salsa.debian.org/med-team/fastdnaml.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 79.8 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main fastdnaml 1.2.2-14 (dsc) [2032 B]
Get:2 http://172.17.0.1/private buster-staging/main fastdnaml 1.2.2-14 (tar) [70.0 kB]
Get:3 http://172.17.0.1/private buster-staging/main fastdnaml 1.2.2-14 (diff) [7740 B]
Fetched 79.8 kB in 0s (572 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/fastdnaml-Y8rUon/fastdnaml-1.2.2' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/fastdnaml-Y8rUon' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-rF2eru/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-rF2eru/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-rF2eru/gpg/trustdb.gpg: trustdb created
gpg: key E70254B6505CF8F7: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key E70254B6505CF8F7: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key E70254B6505CF8F7: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (5766 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-rF2eru/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY E70254B6505CF8F7
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 58 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12044 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper (>= 11~)
Filtered Build-Depends: debhelper (>= 11~)
dpkg-deb: building package 'sbuild-build-depends-fastdnaml-dummy' in '/<<BUILDDIR>>/resolver-rF2eru/apt_archive/sbuild-build-depends-fastdnaml-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-fastdnaml-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Sources [489 B]
Get:5 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Packages [571 B]
Fetched 2393 B in 0s (4867 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-rF2eru/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY E70254B6505CF8F7
Reading package lists...

Install fastdnaml build dependencies (apt-based resolver)
---------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
  groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libelf1
  libfile-stripnondeterminism-perl libglib2.0-0 libicu63 libmagic-mgc
  libmagic1 libncurses6 libpipeline1 libsigsegv2 libtool libuchardet0 libxml2
  m4 man-db po-debconf sensible-utils
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
  libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less
  www-browser libmail-box-perl
Recommended packages:
  curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
  xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils debhelper
  dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
  groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libelf1
  libfile-stripnondeterminism-perl libglib2.0-0 libicu63 libmagic-mgc
  libmagic1 libncurses6 libpipeline1 libsigsegv2 libtool libuchardet0 libxml2
  m4 man-db po-debconf sbuild-build-depends-fastdnaml-dummy sensible-utils
0 upgraded, 34 newly installed, 0 to remove and 58 not upgraded.
Need to get 18.0 MB of archives.
After this operation, 66.0 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-rF2eru/apt_archive ./ sbuild-build-depends-fastdnaml-dummy 0.invalid.0 [856 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-2 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.4-3 [782 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.1-2 [26.6 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.5-2 [1230 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf sensible-utils all 0.0.12 [15.8 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.35-4 [242 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.35-4 [110 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.35-4 [65.3 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-9 [547 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.1.2-1 [13.0 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.176-1 [158 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-3 [66.0 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.3-1 [1077 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-6 [7973 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-3 [132 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libncurses6 armhf 6.1+20181013-2 [78.6 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf debhelper all 12.1.1 [1016 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 18.0 MB in 2s (7528 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 12044 files and directories currently installed.)
Preparing to unpack .../00-libbsd0_0.9.1-2_armhf.deb ...
Unpacking libbsd0:armhf (0.9.1-2) ...
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Preparing to unpack .../02-libuchardet0_0.0.6-3_armhf.deb ...
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Setting up libpipeline1:armhf (1.5.1-2) ...
Setting up libmagic-mgc (1:5.35-4) ...
Setting up libarchive-zip-perl (1.64-1) ...
Setting up libglib2.0-0:armhf (2.58.3-1) ...
No schema files found: doing nothing.
Setting up libmagic1:armhf (1:5.35-4) ...
Setting up gettext-base (0.19.8.1-9) ...
Setting up file (1:5.35-4) ...
Setting up libicu63:armhf (63.1-6) ...
Setting up autotools-dev (20180224.1) ...
Setting up libncurses6:armhf (6.1+20181013-2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up autopoint (0.19.8.1-9) ...
Setting up sensible-utils (0.0.12) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libbsd0:armhf (0.9.1-2) ...
Setting up libelf1:armhf (0.176-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-7+b1) ...
Setting up libfile-stripnondeterminism-perl (1.1.2-1) ...
Setting up libtool (2.4.6-9) ...
Setting up m4 (1.4.18-2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libcroco3:armhf (0.6.12-3) ...
Setting up autoconf (2.69-11) ...
Setting up dwz (0.12-3) ...
Setting up groff-base (1.22.4-3) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up gettext (0.19.8.1-9) ...
Setting up man-db (2.8.5-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up po-debconf (1.0.21) ...
Setting up dh-strip-nondeterminism (1.1.2-1) ...
Setting up debhelper (12.1.1) ...
Setting up dh-autoreconf (19) ...
Setting up sbuild-build-depends-fastdnaml-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.28-7+rpi1) ...

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.19.20-v7+ armhf (armv7l)
Toolchain package versions: binutils_2.31.1-11+rpi1 dpkg-dev_1.19.5 g++-8_8.2.0-21+rpi1 gcc-8_8.2.0-21+rpi1 libc6-dev_2.28-7+rpi1 libstdc++-8-dev_8.2.0-21+rpi1 libstdc++6_8.2.0-21+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 apt_1.8.0~rc3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-11+rpi1 binutils-arm-linux-gnueabihf_2.31.1-11+rpi1 binutils-common_2.31.1-11+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 coreutils_8.30-1 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-21+rpi1 dash_0.5.10.2-5 debconf_1.5.70 debhelper_12.1.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-2 dirmngr_2.2.12-1+rpi1 dpkg_1.19.5 dpkg-dev_1.19.5 dwz_0.12-3 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-21+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-6-base_6.5.0-1+rpi1 gcc-7-base_7.3.0-19 gcc-8_8.2.0-21+rpi1 gcc-8-base_8.2.0-21+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gnupg_2.2.12-1+rpi1 gnupg-l10n_2.2.12-1+rpi1 gnupg-utils_2.2.12-1+rpi1 gpg_2.2.12-1+rpi1 gpg-agent_2.2.12-1+rpi1 gpg-wks-client_2.2.12-1+rpi1 gpg-wks-server_2.2.12-1+rpi1 gpgconf_2.2.12-1+rpi1 gpgsm_2.2.12-1+rpi1 gpgv_2.2.12-1+rpi1 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.52-5 libapt-pkg5.0_1.8.0~rc3 libarchive-zip-perl_1.64-1 libasan5_8.2.0-21+rpi1 libassuan0_2.5.2-1 libatomic1_8.2.0-21+rpi1 libattr1_1:2.4.47-4 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2+b1 libbinutils_2.31.1-11+rpi1 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-7+rpi1 libc-dev-bin_2.28-7+rpi1 libc6_2.28-7+rpi1 libc6-dev_2.28-7+rpi1 libcap-ng0_0.7.9-2 libcc1-0_8.2.0-21+rpi1 libcom-err2_1.44.5-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.3 libdebconfclient0_0.247 libdpkg-perl_1.19.5 libelf1_0.176-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.1.2-1 libgcc-8-dev_8.2.0-21+rpi1 libgcc1_1:8.2.0-21+rpi1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-3 libgdbm6_1.18.1-3 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-2 libgomp1_8.2.0-21+rpi1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libisl19_0.20-2 libksba8_1.3.5-2 libldap-2.4-2_2.4.47+dfsg-3+rpi1 libldap-common_2.4.47+dfsg-3+rpi1 liblocale-gettext-perl_1.07-3+b3 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses6_6.1+20181013-2 libncursesw5_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libnpth0_1.6-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-11+rpi1 libperl5.28_5.28.1-4 libpipeline1_1.5.1-2 libreadline7_7.0-5 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libsqlite3-0_3.26.0+fossilbc891ac6b-2 libss2_1.44.5-1 libstdc++-8-dev_8.2.0-21+rpi1 libstdc++6_8.2.0-21+rpi1 libsystemd0_241-1+rpi1 libtasn1-6_4.13-3 libtext-charwidth-perl_0.04-7.1+b1 libtext-iconv-perl_1.7-5+b10 libtext-wrapi18n-perl_0.06-7.1 libtinfo5_6.1+20181013-2 libtinfo6_6.1+20181013-2 libtool_2.4.6-9 libubsan1_8.2.0-21+rpi1 libuchardet0_0.0.6-3 libudev1_241-1+rpi1 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml2_2.9.4+dfsg1-7+b1 libzstd1_1.3.8+dfsg-3+rpi1 linux-libc-dev_4.18.20-2+rpi1 login_1:4.5-1.1 lsb-base_10.2018112800+rpi1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17 mount_2.33.1-0.1 multiarch-support_2.28-7+rpi1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.28_5.28.1-4 pinentry-curses_1.1.0-1 po-debconf_1.0.21 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-fastdnaml-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-5 tzdata_2018i-1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Sat May 11 07:50:06 2019 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./fastdnaml_1.2.2-14.dsc
dpkg-source: info: extracting fastdnaml in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking fastdnaml_1.2.2.orig.tar.gz
dpkg-source: info: unpacking fastdnaml_1.2.2-14.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying Makefile.patch
dpkg-source: info: applying scripts.patch
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying cross.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/112/bus
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INVOCATION_ID=47cd558e79af465cafb8150e574e7033
JOURNAL_STREAM=8:18910
LANG=en_GB.UTF-8
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=116
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-7ecdbb32-f9ea-41ea-b536-17046186b40d
SCHROOT_UID=112
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
XDG_RUNTIME_DIR=/run/user/112
XDG_SESSION_ID=c2149

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package fastdnaml
dpkg-buildpackage: info: source version 1.2.2-14
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean
   dh_auto_clean
	make -j4 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
(cd source; rm -f *.o fastDNAml)
rm -rf tests
rm -f checkpoint.*
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_clean
rm -fr source/fastDNAml
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
 debian/rules build-arch
dh build-arch
   dh_update_autotools_config -a
   dh_autoreconf -a
   dh_auto_configure -a
   dh_auto_build -a
	make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cd source && cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security fastDNAml.c  -o fastDNAml -lm -Wl,-z,relro -Wl,-z,now
In file included from fastDNAml.c:207:
fastDNAml.h:222:10: warning: conflicting types for built-in function 'malloc' [-Wbuiltin-declaration-mismatch]
    char *malloc();
          ^~~~~~
fastDNAml.c: In function 'freeTopol':
fastDNAml.h:228:28: warning: implicit declaration of function 'free' [-Wimplicit-function-declaration]
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:342:5: note: in expansion of macro 'Free'
     Free(tpl->links);
     ^~~~
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:342:5: note: in expansion of macro 'Free'
     Free(tpl->links);
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:342:5: note: in expansion of macro 'Free'
     Free(tpl->links);
     ^~~~
fastDNAml.c: In function 'freeTreeNode':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:1533:23: note: in expansion of macro 'Free'
         if (p->x->lv) Free(p->x->lv);
                       ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:1533:23: note: in expansion of macro 'Free'
         if (p->x->lv) Free(p->x->lv);
                       ^~~~
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:1534:9: note: in expansion of macro 'Free'
         Free(p->x);
         ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:1534:9: note: in expansion of macro 'Free'
         Free(p->x);
         ^~~~
fastDNAml.c: In function 'freeTree':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:1560:5: note: in expansion of macro 'Free'
     Free(tr->nodep[1]);       /* Free the actual nodes */
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:1560:5: note: in expansion of macro 'Free'
     Free(tr->nodep[1]);       /* Free the actual nodes */
     ^~~~
fastDNAml.c: In function 'setupxarray':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:2028:9: note: in expansion of macro 'Free'
         Free(x);
         ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:2028:9: note: in expansion of macro 'Free'
         Free(x);
         ^~~~
fastDNAml.c: In function 'makenewz':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:2604:5: note: in expansion of macro 'Free'
     Free(abi);
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:2604:5: note: in expansion of macro 'Free'
     Free(abi);
     ^~~~
fastDNAml.c: In function 'readKeyValue':
fastDNAml.c:2886:15: warning: implicit declaration of function 'strlen' [-Wimplicit-function-declaration]
     string += strlen(key);
               ^~~~~~
fastDNAml.c:2886:15: warning: incompatible implicit declaration of built-in function 'strlen'
fastDNAml.c:2886:15: note: include '<string.h>' or provide a declaration of 'strlen'
fastDNAml.c:208:1:
+#include <string.h>
 
fastDNAml.c:2886:15:
     string += strlen(key);
               ^~~~~~
fastDNAml.c: In function 'fopen_pid':
fastDNAml.c:3231:47: warning: implicit declaration of function 'getpid'; did you mean 'getxtip'? [-Wimplicit-function-declaration]
     (void) sprintf(name_pid, "%s.%d", filenm, getpid());
                                               ^~~~~~
                                               getxtip
In file included from fastDNAml.c:207:
fastDNAml.c: In function 'treeOut':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:3683:5: note: in expansion of macro 'Free'
     Free(treestr);
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:3683:5: note: in expansion of macro 'Free'
     Free(treestr);
     ^~~~
fastDNAml.c: In function 'cmpBestTrees':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:4535:5: note: in expansion of macro 'Free'
     Free(log_f0);
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:4535:5: note: in expansion of macro 'Free'
     Free(log_f0);
     ^~~~
fastDNAml.c: In function 'makeDenovoTree':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:4765:5: note: in expansion of macro 'Free'
     Free(enterorder);
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^~~~
fastDNAml.c:4765:5: note: in expansion of macro 'Free'
     Free(enterorder);
     ^~~~
fastDNAml.c: At top level:
fastDNAml.c:4775:3: warning: return type defaults to 'int' [-Wimplicit-int]
   main ()
   ^~~~
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_test -a
   create-stamp debian/debhelper-build-stamp
 fakeroot debian/rules binary-arch
dh binary-arch
   dh_testroot -a
   dh_prep -a
   dh_installdirs -a
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# do nothing
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
cp -a docs/fastDNAml_doc_1.2.txt `pwd`/debian/`dh_listpackages`/usr/share/`dh_listpackages`/fastdnaml_help
# the scripts have to be executable thus mentioning these in debian/install is not enough
cp -a scripts/*                  `pwd`/debian/`dh_listpackages`/usr/lib/`dh_listpackages`/bin
chmod 755 `pwd`/debian/`dh_listpackages`/usr/lib/`dh_listpackages`/bin/*
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a
   dh_installchangelogs -a
   dh_installexamples -a
   dh_installman -a
   dh_installmenu -a
   dh_perl -a
   dh_link -a
   dh_strip_nondeterminism -a
   dh_compress -a
   dh_fixperms -a
   dh_missing -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/fastdnaml/usr/bin/fastDNAml was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
   dh_installdeb -a
   dh_gencontrol -a
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package 'fastdnaml' in '../fastdnaml_1.2.2-14_armhf.deb'.
dpkg-deb: building package 'fastdnaml-dbgsym' in '../fastdnaml-dbgsym_1.2.2-14_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian 2019 test autobuilder <root@raspbian.org> >../fastdnaml_1.2.2-14_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-05-13T04:46:32Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


fastdnaml_1.2.2-14_armhf.changes:
---------------------------------

Format: 1.8
Date: Sat, 11 May 2019 09:42:22 +0200
Source: fastdnaml
Binary: fastdnaml fastdnaml-dbgsym
Architecture: armhf
Version: 1.2.2-14
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian 2019 test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 fastdnaml  - Tool for construction of phylogenetic trees of DNA sequences
Closes: 928790
Changes:
 fastdnaml (1.2.2-14) unstable; urgency=medium
 .
   [ Jelmer Vernooij ]
   * Use secure copyright file specification URI.
   * Trim trailing whitespace.
 .
   [ Andreas Tille ]
   * Do not hard code cc
     Closes: #928790
   * Standards-Version: 4.3.0
Checksums-Sha1:
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 93c2a5e8e6234f98f62f751119a8fc180ed02a96b4cc80b59351857d6bd4be1a 4460 fastdnaml_1.2.2-14_armhf.buildinfo
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Files:
 18bea4719ffe9143e11b494370408324 63852 debug optional fastdnaml-dbgsym_1.2.2-14_armhf.deb
 a57f5709b3ea6c8c5857038a0e1cf2d1 4460 science optional fastdnaml_1.2.2-14_armhf.buildinfo
 44edc2232e98f59976ea232bc24e69ad 54512 science optional fastdnaml_1.2.2-14_armhf.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: fastdnaml
Binary: fastdnaml
Architecture: armhf
Version: 1.2.2-14
Checksums-Md5:
 18bea4719ffe9143e11b494370408324 63852 fastdnaml-dbgsym_1.2.2-14_armhf.deb
 44edc2232e98f59976ea232bc24e69ad 54512 fastdnaml_1.2.2-14_armhf.deb
Checksums-Sha1:
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Checksums-Sha256:
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 a09148933a07487af0a60bf828b8f080c4a45371d8f1835c032eda464dddbab3 54512 fastdnaml_1.2.2-14_armhf.deb
Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Mon, 13 May 2019 04:46:31 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
 autoconf (= 2.69-11),
 automake (= 1:1.16.1-4),
 autopoint (= 0.19.8.1-9),
 autotools-dev (= 20180224.1),
 base-files (= 10.1+rpi1),
 base-passwd (= 3.5.46),
 bash (= 5.0-2),
 binutils (= 2.31.1-11+rpi1),
 binutils-arm-linux-gnueabihf (= 2.31.1-11+rpi1),
 binutils-common (= 2.31.1-11+rpi1),
 bsdmainutils (= 11.1.2),
 bsdutils (= 1:2.33.1-0.1),
 build-essential (= 12.5),
 bzip2 (= 1.0.6-9),
 coreutils (= 8.30-1),
 cpp (= 4:8.2.0-2+rpi1),
 cpp-8 (= 8.2.0-21+rpi1),
 dash (= 0.5.10.2-5),
 debconf (= 1.5.70),
 debhelper (= 12.1.1),
 debianutils (= 4.8.6.1),
 dh-autoreconf (= 19),
 dh-strip-nondeterminism (= 1.1.2-1),
 diffutils (= 1:3.7-2),
 dpkg (= 1.19.5),
 dpkg-dev (= 1.19.5),
 dwz (= 0.12-3),
 fdisk (= 2.33.1-0.1),
 file (= 1:5.35-4),
 findutils (= 4.6.0+git+20190209-2),
 g++ (= 4:8.2.0-2+rpi1),
 g++-8 (= 8.2.0-21+rpi1),
 gcc (= 4:8.2.0-2+rpi1),
 gcc-8 (= 8.2.0-21+rpi1),
 gcc-8-base (= 8.2.0-21+rpi1),
 gettext (= 0.19.8.1-9),
 gettext-base (= 0.19.8.1-9),
 grep (= 3.3-1),
 groff-base (= 1.22.4-3),
 gzip (= 1.9-3),
 hostname (= 3.21),
 init-system-helpers (= 1.56+nmu1),
 intltool-debian (= 0.35.0+20060710.5),
 libacl1 (= 2.2.52-5),
 libarchive-zip-perl (= 1.64-1),
 libasan5 (= 8.2.0-21+rpi1),
 libatomic1 (= 8.2.0-21+rpi1),
 libattr1 (= 1:2.4.47-4),
 libaudit-common (= 1:2.8.4-2),
 libaudit1 (= 1:2.8.4-2+b1),
 libbinutils (= 2.31.1-11+rpi1),
 libblkid1 (= 2.33.1-0.1),
 libbsd0 (= 0.9.1-2),
 libbz2-1.0 (= 1.0.6-9),
 libc-bin (= 2.28-7+rpi1),
 libc-dev-bin (= 2.28-7+rpi1),
 libc6 (= 2.28-7+rpi1),
 libc6-dev (= 2.28-7+rpi1),
 libcap-ng0 (= 0.7.9-2),
 libcc1-0 (= 8.2.0-21+rpi1),
 libcroco3 (= 0.6.12-3),
 libdb5.3 (= 5.3.28+dfsg1-0.3),
 libdebconfclient0 (= 0.247),
 libdpkg-perl (= 1.19.5),
 libelf1 (= 0.176-1),
 libfdisk1 (= 2.33.1-0.1),
 libffi6 (= 3.2.1-9),
 libfile-stripnondeterminism-perl (= 1.1.2-1),
 libgcc-8-dev (= 8.2.0-21+rpi1),
 libgcc1 (= 1:8.2.0-21+rpi1),
 libgcrypt20 (= 1.8.4-5),
 libgdbm-compat4 (= 1.18.1-3),
 libgdbm6 (= 1.18.1-3),
 libglib2.0-0 (= 2.58.3-1),
 libgmp10 (= 2:6.1.2+dfsg-4),
 libgomp1 (= 8.2.0-21+rpi1),
 libgpg-error0 (= 1.35-1),
 libicu63 (= 63.1-6),
 libisl19 (= 0.20-2),
 liblz4-1 (= 1.8.3-1),
 liblzma5 (= 5.2.4-1),
 libmagic-mgc (= 1:5.35-4),
 libmagic1 (= 1:5.35-4),
 libmount1 (= 2.33.1-0.1),
 libmpc3 (= 1.1.0-1),
 libmpfr6 (= 4.0.2-1),
 libncurses6 (= 6.1+20181013-2),
 libncursesw6 (= 6.1+20181013-2),
 libpam-modules (= 1.3.1-5),
 libpam-modules-bin (= 1.3.1-5),
 libpam-runtime (= 1.3.1-5),
 libpam0g (= 1.3.1-5),
 libpcre3 (= 2:8.39-11+rpi1),
 libperl5.28 (= 5.28.1-4),
 libpipeline1 (= 1.5.1-2),
 libseccomp2 (= 2.3.3-4),
 libselinux1 (= 2.8-1+b1),
 libsigsegv2 (= 2.12-2),
 libsmartcols1 (= 2.33.1-0.1),
 libstdc++-8-dev (= 8.2.0-21+rpi1),
 libstdc++6 (= 8.2.0-21+rpi1),
 libsystemd0 (= 241-1+rpi1),
 libtinfo5 (= 6.1+20181013-2),
 libtinfo6 (= 6.1+20181013-2),
 libtool (= 2.4.6-9),
 libubsan1 (= 8.2.0-21+rpi1),
 libuchardet0 (= 0.0.6-3),
 libudev1 (= 241-1+rpi1),
 libunistring2 (= 0.9.10-1),
 libuuid1 (= 2.33.1-0.1),
 libxml2 (= 2.9.4+dfsg1-7+b1),
 linux-libc-dev (= 4.18.20-2+rpi1),
 login (= 1:4.5-1.1),
 m4 (= 1.4.18-2),
 make (= 4.2.1-1.2),
 man-db (= 2.8.5-2),
 mawk (= 1.3.3-17),
 ncurses-base (= 6.1+20181013-2),
 ncurses-bin (= 6.1+20181013-2),
 patch (= 2.7.6-3),
 perl (= 5.28.1-4),
 perl-base (= 5.28.1-4),
 perl-modules-5.28 (= 5.28.1-4),
 po-debconf (= 1.0.21),
 sed (= 4.7-1),
 sensible-utils (= 0.0.12),
 sysvinit-utils (= 2.93-8),
 tar (= 1.30+dfsg-5),
 util-linux (= 2.33.1-0.1),
 xz-utils (= 5.2.4-1),
 zlib1g (= 1:1.2.11.dfsg-1)
Environment:
 DEB_BUILD_OPTIONS="parallel=4"
 LANG="en_GB.UTF-8"
 LC_ALL="POSIX"
 SOURCE_DATE_EPOCH="1557560542"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


fastdnaml-dbgsym_1.2.2-14_armhf.deb
-----------------------------------

 new Debian package, version 2.0.
 size 63852 bytes: control archive=532 bytes.
     379 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: fastdnaml-dbgsym
 Source: fastdnaml
 Version: 1.2.2-14
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 79
 Depends: fastdnaml (= 1.2.2-14)
 Section: debug
 Priority: optional
 Description: debug symbols for fastdnaml
 Build-Ids: 4bb0afe8524bda07dc83547862e055f56093f9c5

drwxr-xr-x root/root         0 2019-05-11 07:42 ./
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/lib/
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/lib/debug/
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/lib/debug/.build-id/4b/
-rw-r--r-- root/root     70176 2019-05-11 07:42 ./usr/lib/debug/.build-id/4b/b0afe8524bda07dc83547862e055f56093f9c5.debug
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/doc/
lrwxrwxrwx root/root         0 2019-05-11 07:42 ./usr/share/doc/fastdnaml-dbgsym -> fastdnaml


fastdnaml_1.2.2-14_armhf.deb
----------------------------

 new Debian package, version 2.0.
 size 54512 bytes: control archive=2892 bytes.
     978 bytes,    22 lines      control              
    5174 bytes,    72 lines      md5sums              
     192 bytes,     7 lines   *  postinst             #!/bin/sh
     167 bytes,     5 lines   *  postrm               #!/bin/sh
 Package: fastdnaml
 Version: 1.2.2-14
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 221
 Depends: libc6 (>= 2.7)
 Suggests: phylip
 Section: science
 Priority: optional
 Homepage: ftp://ftp.bio.indiana.edu/molbio/evolve/fastdnaml/fastDNAml.html
 Description: Tool for construction of phylogenetic trees of DNA sequences
  fastDNAml is a program derived from Joseph Felsenstein's version 3.3 DNAML
  (part of his PHYLIP package).  Users should consult the documentation for
  DNAML before using this program.
  .
  fastDNAml is an attempt to solve the same problem as DNAML, but to do so
  faster and using less memory, so that larger trees and/or more bootstrap
  replicates become tractable.  Much of fastDNAml is merely a recoding of the
  PHYLIP 3.3 DNAML program from PASCAL to C.
  .
  Note that the homepage of this program is not available any more and so
  this program will probably not see any further updates.

drwxr-xr-x root/root         0 2019-05-11 07:42 ./
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/bin/
-rwxr-xr-x root/root     50660 2019-05-11 07:42 ./usr/bin/fastDNAml
-rwxr-xr-x root/root       420 2019-05-11 07:42 ./usr/bin/fastDNAml-util
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/lib/
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/lib/fastdnaml/
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/
-rwxr-xr-x root/root       857 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/ae2dnaml
-rwxr-xr-x root/root       216 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/bootstrap
-rwxr-xr-x root/root       163 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/categories
-rwxr-xr-x root/root       140 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/categories_file
-rwxr-xr-x root/root       179 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/checkpoint_summary
-rwxr-xr-x root/root       145 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/clean_checkpoints
-rwxr-xr-x root/root      3504 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/clean_jumbles
-rwxr-xr-x root/root       183 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/dnaml_progress
-rwxr-xr-x root/root      6087 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/fastDNAml_boot
-rwxr-xr-x root/root      3779 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/fastDNAml_loop
-rwxr-xr-x root/root       225 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/frequencies
-rwxr-xr-x root/root       267 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/global
-rwxr-xr-x root/root      1369 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/iterate_rates
-rwxr-xr-x root/root       213 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/jumble
-rwxr-xr-x root/root       172 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/min_info
-rwxr-xr-x root/root       172 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/n_categories
-rwxr-xr-x root/root       124 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/n_files
-rwxr-xr-x root/root       759 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/out.PID
-rwxr-xr-x root/root       162 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/outgroup
-rwxr-xr-x root/root       134 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/printdata
-rwxr-xr-x root/root       133 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/quickadd
-rwxr-xr-x root/root       688 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/restart
-rwxr-xr-x root/root       107 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/scores
-rwxr-xr-x root/root       174 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/transition
-rwxr-xr-x root/root       272 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/treefile
-rwxr-xr-x root/root        75 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/treefile2prolog
-rwxr-xr-x root/root       370 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/trees2NEXUS
-rwxr-xr-x root/root        72 2019-05-11 07:42 ./usr/lib/fastdnaml/bin/trees2prolog
-rwxr-xr-x root/root       136 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/userlengths
-rwxr-xr-x root/root       270 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/usertree
-rwxr-xr-x root/root       270 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/usertrees
-rwxr-xr-x root/root       161 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/weights
-rwxr-xr-x root/root       187 2000-01-03 15:58 ./usr/lib/fastdnaml/bin/weights_categories
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/doc-base/
-rw-r--r-- root/root       350 2019-05-11 07:42 ./usr/share/doc-base/fastdnaml
-rw-r--r-- root/root       526 2019-05-11 07:42 ./usr/share/doc-base/fastdnaml-scripts
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/doc/fastdnaml/
-rw-r--r-- root/root       619 2019-05-11 07:42 ./usr/share/doc/fastdnaml/README.Debian
-rw-r--r-- root/root       119 2019-05-11 07:42 ./usr/share/doc/fastdnaml/README.test
-rw-r--r-- root/root      2468 2019-05-11 07:42 ./usr/share/doc/fastdnaml/changelog.Debian.gz
-rw-r--r-- root/root      1273 2019-05-11 07:42 ./usr/share/doc/fastdnaml/copyright
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/doc/fastdnaml/examples/
-rw-r--r-- root/root      2139 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5.out
-rw-r--r-- root/root       708 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5.phy
-rw-r--r-- root/root      2189 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5B.out
-rw-r--r-- root/root       717 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5B.phy
-rw-r--r-- root/root      2554 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5C.out
-rw-r--r-- root/root       903 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5C.phy
-rw-r--r-- root/root      2092 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5GRT.out
-rw-r--r-- root/root       796 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5GRT.phy
-rw-r--r-- root/root      2139 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I.out
-rw-r--r-- root/root       710 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I.phy
-rw-r--r-- root/root      2139 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I2.out
-rw-r--r-- root/root       800 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5I2.phy
-rw-r--r-- root/root      2172 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5J.out
-rw-r--r-- root/root       717 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5J.phy
-rw-r--r-- root/root      2370 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5R.out
-rw-r--r-- root/root       780 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5R.phy
-rw-r--r-- root/root      2161 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5TF.out
-rw-r--r-- root/root       743 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5TF.phy
-rw-r--r-- root/root      1297 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5U.out.gz
-rw-r--r-- root/root       941 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5U.phy
-rw-r--r-- root/root      2157 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5W.out
-rw-r--r-- root/root       851 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5W.phy
-rw-r--r-- root/root      2503 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5WC.out
-rw-r--r-- root/root      1045 2000-01-03 15:58 ./usr/share/doc/fastdnaml/examples/test5WC.phy
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/doc/fastdnaml/examples/tests/
-rw-r--r-- root/root       715 2019-05-11 07:42 ./usr/share/doc/fastdnaml/examples/tests/Makefile
-rw-r--r-- root/root        27 2019-05-11 07:42 ./usr/share/doc/fastdnaml/examples/tests/control
-rw-r--r-- root/root      1246 2019-05-11 07:42 ./usr/share/doc/fastdnaml/examples/tests/fastdnaml.data
lrwxrwxrwx root/root         0 2019-05-11 07:42 ./usr/share/doc/fastdnaml/fastDNAml_doc_1.2.txt -> ../../fastdnaml/fastdnaml_help
-rw-r--r-- root/root      6980 2000-01-03 15:58 ./usr/share/doc/fastdnaml/fastDNAml_scripts.txt.gz
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/fastdnaml/
-rw-r--r-- root/root     34150 2000-01-03 15:58 ./usr/share/fastdnaml/fastdnaml_help
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/man/
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/man/man1/
lrwxrwxrwx root/root         0 2019-05-11 07:42 ./usr/share/man/man1/fastDNAml-util.1.gz -> fastDNAml.1.gz
-rw-r--r-- root/root       742 2019-05-11 07:42 ./usr/share/man/man1/fastDNAml.1.gz
drwxr-xr-x root/root         0 2019-05-11 07:42 ./usr/share/menu/
-rw-r--r-- root/root       191 2019-05-11 07:42 ./usr/share/menu/fastdnaml


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build Type: any
Build-Space: 1508
Build-Time: 18
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 227
Job: fastdnaml_1.2.2-14
Machine Architecture: armhf
Package: fastdnaml
Package-Time: 275
Source-Version: 1.2.2-14
Space: 1508
Status: successful
Version: 1.2.2-14
--------------------------------------------------------------------------------
Finished at 2019-05-13T04:46:32Z
Build needed 00:04:35, 1508k disk space