falconkit →
0.1.3+20140820-1 →
armhf → 2016-02-01 01:52:46
sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on bm-wb-03
╔══════════════════════════════════════════════════════════════════════════════╗
║ falconkit 0.1.3+20140820-1 (armhf) 01 Feb 2016 01:38 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: falconkit
Version: 0.1.3+20140820-1
Source Version: 0.1.3+20140820-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/falconkit-HPNlJY/falconkit-0.1.3+20140820' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/falconkit-HPNlJY' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-69f4bda9-be29-4802-bbd1-7e273b324569' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8652 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [10.7 MB]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files │
└──────────────────────────────────────────────────────────────────────────────┘
Check APT
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Checking available source versions...
Download source files with APT
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Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'falconkit' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debian-med/falconkit.git
Please use:
git clone git://anonscm.debian.org/debian-med/falconkit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 72.1 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main falconkit 0.1.3+20140820-1 (dsc) [2096 B]
Get:2 http://172.17.0.1/private stretch-staging/main falconkit 0.1.3+20140820-1 (tar) [66.1 kB]
Get:3 http://172.17.0.1/private stretch-staging/main falconkit 0.1.3+20140820-1 (diff) [3876 B]
Fetched 72.1 kB in 0s (1270 kB/s)
Download complete and in download only mode
Check architectures
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Check dependencies
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/«BUILDDIR»/resolver-6mBNY2/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-6mBNY2/apt_archive ./ InRelease
Ign:1 file:/«BUILDDIR»/resolver-6mBNY2/apt_archive ./ InRelease
Get:2 file:/«BUILDDIR»/resolver-6mBNY2/apt_archive ./ Release [2119 B]
Get:2 file:/«BUILDDIR»/resolver-6mBNY2/apt_archive ./ Release [2119 B]
Get:3 file:/«BUILDDIR»/resolver-6mBNY2/apt_archive ./ Release.gpg [299 B]
Get:3 file:/«BUILDDIR»/resolver-6mBNY2/apt_archive ./ Release.gpg [299 B]
Get:4 file:/«BUILDDIR»/resolver-6mBNY2/apt_archive ./ Sources [208 B]
Get:5 file:/«BUILDDIR»/resolver-6mBNY2/apt_archive ./ Packages [527 B]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
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Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 35 not upgraded.
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Get:1 file:/«BUILDDIR»/resolver-6mBNY2/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [768 B]
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package sbuild-build-depends-core-dummy.
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Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), dh-python, rename, python-all-dev, python-setuptools, python-networkx, python-pbcore
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), dh-python, rename, python-all-dev, python-setuptools, python-networkx, python-pbcore
dpkg-deb: building package 'sbuild-build-depends-falconkit-dummy' in '/«BUILDDIR»/resolver-bzVYSq/apt_archive/sbuild-build-depends-falconkit-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-bzVYSq/apt_archive ./ InRelease
Ign:1 file:/«BUILDDIR»/resolver-bzVYSq/apt_archive ./ InRelease
Get:2 file:/«BUILDDIR»/resolver-bzVYSq/apt_archive ./ Release [2119 B]
Get:2 file:/«BUILDDIR»/resolver-bzVYSq/apt_archive ./ Release [2119 B]
Get:3 file:/«BUILDDIR»/resolver-bzVYSq/apt_archive ./ Release.gpg [299 B]
Get:3 file:/«BUILDDIR»/resolver-bzVYSq/apt_archive ./ Release.gpg [299 B]
Get:4 file:/«BUILDDIR»/resolver-bzVYSq/apt_archive ./ Sources [357 B]
Get:5 file:/«BUILDDIR»/resolver-bzVYSq/apt_archive ./ Packages [614 B]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install falconkit build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autotools-dev bsdmainutils cpp-5 debhelper dh-python dh-strip-nondeterminism
file g++-5 gcc-5 gcc-5-base gettext gettext-base groff-base intltool-debian
libaec0 libarchive-zip-perl libasan2 libatomic1 libblas-common libblas3
libcc1-0 libcroco3 libexpat1 libexpat1-dev libffi6
libfile-stripnondeterminism-perl libgcc-5-dev libgcc1 libgfortran3
libglib2.0-0 libgomp1 libhdf5-10 libhts1 libicu55 liblapack3 libmagic1
libmpdec2 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib
libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib
libpython3-stdlib libpython3.5-minimal libpython3.5-stdlib libsqlite3-0
libssl1.0.2 libstdc++-5-dev libstdc++6 libsz2 libtimedate-perl libubsan0
libunistring0 libxml2 man-db mime-support po-debconf python python-all
python-all-dev python-decorator python-dev python-h5py python-minimal
python-networkx python-numpy python-pbcore python-pkg-resources python-pysam
python-setuptools python-six python2.7 python2.7-dev python2.7-minimal
python3 python3-minimal python3.5 python3.5-minimal rename
Suggested packages:
wamerican | wordlist whois vacation gcc-5-locales dh-make gcc-5-doc
libstdc++6-5-dbg libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg
libasan2-dbg liblsan0-dbg libtsan0-dbg libubsan0-dbg libcilkrts5-dbg
libmpx0-dbg libquadmath0-dbg gettext-doc autopoint libasprintf-dev
libgettextpo-dev groff libstdc++-5-doc less www-browser libmail-box-perl
python-doc python-tk python-networkx-doc gfortran python-nose
python-numpy-dbg python-numpy-doc python-pbcore-doc python-setuptools-doc
python2.7-doc binfmt-support python3-doc python3-tk python3-venv
python3.5-venv python3.5-doc
Recommended packages:
curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs
xml-core libmail-sendmail-perl python-matplotlib python-pygraphviz
| python-pydot python-scipy python-yaml
The following NEW packages will be installed:
autotools-dev bsdmainutils debhelper dh-python dh-strip-nondeterminism file
gettext gettext-base groff-base intltool-debian libaec0 libarchive-zip-perl
libblas-common libblas3 libcroco3 libexpat1 libexpat1-dev libffi6
libfile-stripnondeterminism-perl libgfortran3 libglib2.0-0 libhdf5-10
libhts1 libicu55 liblapack3 libmagic1 libmpdec2 libpipeline1
libpython-all-dev libpython-dev libpython-stdlib libpython2.7
libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib
libpython3.5-minimal libpython3.5-stdlib libsqlite3-0 libssl1.0.2 libsz2
libtimedate-perl libunistring0 libxml2 man-db mime-support po-debconf python
python-all python-all-dev python-decorator python-dev python-h5py
python-minimal python-networkx python-numpy python-pbcore
python-pkg-resources python-pysam python-setuptools python-six python2.7
python2.7-dev python2.7-minimal python3 python3-minimal python3.5
python3.5-minimal rename sbuild-build-depends-falconkit-dummy
The following packages will be upgraded:
cpp-5 g++-5 gcc-5 gcc-5-base libasan2 libatomic1 libcc1-0 libgcc-5-dev
libgcc1 libgomp1 libstdc++-5-dev libstdc++6 libubsan0
13 upgraded, 70 newly installed, 0 to remove and 22 not upgraded.
Need to get 143 MB/143 MB of archives.
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Get:2 http://172.17.0.1/private stretch-staging/main armhf libgomp1 armhf 5.3.1-7+rpi1 [47.3 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf libatomic1 armhf 5.3.1-7+rpi1 [6566 B]
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Get:16 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.6 [177 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
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Get:36 http://172.17.0.1/private stretch-staging/main armhf libpython3.5-stdlib armhf 3.5.1-5 [2063 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf python3.5 armhf 3.5.1-5 [194 kB]
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Get:39 http://172.17.0.1/private stretch-staging/main armhf dh-python all 2.20151103 [76.9 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf python3 armhf 3.5.1-1 [21.5 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.25-2 [250 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.25-2 [61.2 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.7-2 [111 kB]
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Get:45 http://172.17.0.1/private stretch-staging/main armhf libicu55 armhf 55.1-7 [7380 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.3+dfsg1-1 [800 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20150820.1 [71.7 kB]
Get:48 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.46.2-3 [2482 kB]
Get:49 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:50 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.7-2 [1400 kB]
Get:51 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:52 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.19 [249 kB]
Get:53 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.56-2 [94.9 kB]
Get:54 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.014-1 [10.6 kB]
Get:55 http://172.17.0.1/private stretch-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:56 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.014-1 [7472 B]
Get:57 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20160115 [827 kB]
Get:58 http://172.17.0.1/private stretch-staging/main armhf libaec0 armhf 0.3.2-1 [19.4 kB]
Get:59 http://172.17.0.1/private stretch-staging/main armhf libblas-common armhf 3.6.0-2 [13.5 kB]
Get:60 http://172.17.0.1/private stretch-staging/main armhf libgfortran3 armhf 5.3.1-7+rpi1 [154 kB]
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Get:64 http://172.17.0.1/private stretch-staging/main armhf libhdf5-10 armhf 1.8.16+docs-3 [981 kB]
Get:65 http://172.17.0.1/private stretch-staging/main armhf libhts1 armhf 1.2.1-2+rpi1 [191 kB]
Get:66 http://172.17.0.1/private stretch-staging/main armhf liblapack3 armhf 3.6.0-2 [1382 kB]
Get:67 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-dev armhf 2.7.11-3 [27.1 MB]
Get:68 http://172.17.0.1/private stretch-staging/main armhf libpython-dev armhf 2.7.11-1 [19.6 kB]
Get:69 http://172.17.0.1/private stretch-staging/main armhf libpython-all-dev armhf 2.7.11-1 [958 B]
Get:70 http://172.17.0.1/private stretch-staging/main armhf python-all armhf 2.7.11-1 [940 B]
Get:71 http://172.17.0.1/private stretch-staging/main armhf python2.7-dev armhf 2.7.11-3 [279 kB]
Get:72 http://172.17.0.1/private stretch-staging/main armhf python-dev armhf 2.7.11-1 [1138 B]
Get:73 http://172.17.0.1/private stretch-staging/main armhf python-all-dev armhf 2.7.11-1 [962 B]
Get:74 http://172.17.0.1/private stretch-staging/main armhf python-decorator all 4.0.6-1 [12.7 kB]
Get:75 http://172.17.0.1/private stretch-staging/main armhf python-numpy armhf 1:1.10.4-2 [1551 kB]
Get:76 http://172.17.0.1/private stretch-staging/main armhf python-six all 1.10.0-1 [14.1 kB]
Get:77 http://172.17.0.1/private stretch-staging/main armhf python-h5py armhf 2.5.0-1+b1 [440 kB]
Get:78 http://172.17.0.1/private stretch-staging/main armhf python-networkx all 1.11~rc1-1 [821 kB]
Get:79 http://172.17.0.1/private stretch-staging/main armhf python-pysam armhf 0.8.4+ds-1 [716 kB]
Get:80 http://172.17.0.1/private stretch-staging/main armhf python-pkg-resources all 18.8-1 [100 kB]
Get:81 http://172.17.0.1/private stretch-staging/main armhf python-pbcore all 1.2.7+dfsg-1 [9084 kB]
Get:82 http://172.17.0.1/private stretch-staging/main armhf python-setuptools all 18.8-1 [202 kB]
Get:83 http://172.17.0.1/private stretch-staging/main armhf rename all 0.20-4 [12.5 kB]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.25.90.20160101-2 dpkg-dev_1.18.4 g++-5_5.3.1-7+rpi1 gcc-5_5.3.1-7+rpi1 libc6-dev_2.21-6 libstdc++-5-dev_5.3.1-7+rpi1 libstdc++6_5.3.1-7+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: adduser_3.113+nmu3 apt_1.2 autotools-dev_20150820.1 base-files_9.5+rpi1 base-passwd_3.5.39 bash_4.3-14 binutils_2.25.90.20160101-2 bsdmainutils_9.0.6 bsdutils_1:2.27.1-1 build-essential_11.7 bzip2_1.0.6-8 coreutils_8.23-4 cpio_2.11+dfsg-4.1 cpp_4:5.3.1-1+rpi1 cpp-5_5.3.1-7+rpi1 dash_0.5.7-4 debconf_1.5.58 debfoster_2.7-2 debhelper_9.20160115 debianutils_4.5.1 dh-python_2.20151103 dh-strip-nondeterminism_0.014-1 diffutils_1:3.3-3 dmsetup_2:1.02.114-1 dpkg_1.18.4 dpkg-dev_1.18.4 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.6.0-2 g++_4:5.3.1-1+rpi1 g++-5_5.3.1-7+rpi1 gcc_4:5.3.1-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-3 gcc-4.9-base_4.9.3-10 gcc-5_5.3.1-7+rpi1 gcc-5-base_5.3.1-7+rpi1 gettext_0.19.7-2 gettext-base_0.19.7-2 gnupg_1.4.20-1 gpgv_1.4.20-1 grep_2.22-1 groff-base_1.22.3-5 gzip_1.6-4 hostname_3.16 init_1.24 init-system-helpers_1.24 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-6+rpi1 kmod_21-1 libacl1_2.2.52-2 libaec0_0.3.2-1 libapparmor1_2.10-2+b3 libapt-pkg5.0_1.2 libarchive-zip-perl_1.56-2 libasan2_5.3.1-7+rpi1 libatomic1_5.3.1-7+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.5-1 libaudit1_1:2.4.5-1 libblas-common_3.6.0-2 libblas3_3.6.0-2 libblkid1_2.27.1-1 libbz2-1.0_1.0.6-8 libc-bin_2.21-6 libc-dev-bin_2.21-6 libc6_2.21-6 libc6-dev_2.21-6 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.3.1-7+rpi1 libcomerr2_1.42.13-1 libcroco3_0.6.11-1 libcryptsetup4_2:1.7.0-2 libdb5.3_5.3.28-11 libdbus-1-3_1.10.6-1 libdebconfclient0_0.201 libdevmapper1.02.1_2:1.02.114-1 libdpkg-perl_1.18.4 libdrm2_2.4.66-2 libexpat1_2.1.0-7 libexpat1-dev_2.1.0-7 libfakeroot_1.20.2-1 libfdisk1_2.27.1-1 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.014-1 libgc1c2_1:7.4.2-7.3 libgcc-5-dev_5.3.1-7+rpi1 libgcc1_1:5.3.1-7+rpi1 libgcrypt20_1.6.4-4 libgdbm3_1.8.3-13.1 libgfortran3_5.3.1-7+rpi1 libglib2.0-0_2.46.2-3 libgmp10_2:6.1.0+dfsg-2 libgomp1_5.3.1-7+rpi1 libgpg-error0_1.21-1 libhdf5-10_1.8.16+docs-3 libhts1_1.2.1-2+rpi1 libicu55_55.1-7 libisl15_0.15-3 libklibc_2.0.4-6+rpi1 libkmod2_21-1 liblapack3_3.6.0-2 liblz4-1_0.0~r131-1 liblzma5_5.1.1alpha+20120614-2.1 libmagic1_1:5.25-2 libmount1_2.27.1-1 libmpc3_1.0.3-1 libmpdec2_2.4.1-1 libmpfr4_3.1.3-2 libncurses5_6.0+20151024-2 libncursesw5_6.0+20151024-2 libpam-modules_1.1.8-3.2 libpam-modules-bin_1.1.8-3.2 libpam-runtime_1.1.8-3.2 libpam0g_1.1.8-3.2 libpcre3_2:8.38-1 libperl5.22_5.22.1-4 libpipeline1_1.4.1-2 libplymouth4_0.9.2-3 libpng12-0_1.2.54-1 libprocps5_2:3.3.11-3 libpython-all-dev_2.7.11-1 libpython-dev_2.7.11-1 libpython-stdlib_2.7.11-1 libpython2.7_2.7.11-3 libpython2.7-dev_2.7.11-3 libpython2.7-minimal_2.7.11-3 libpython2.7-stdlib_2.7.11-3 libpython3-stdlib_3.5.1-1 libpython3.5-minimal_3.5.1-5 libpython3.5-stdlib_3.5.1-5 libreadline6_6.3-8+b3 libseccomp2_2.2.3-2 libselinux1_2.4-3 libsemanage-common_2.4-3 libsemanage1_2.4-3 libsepol1_2.4-2 libsmartcols1_2.27.1-1 libsqlite3-0_3.10.2-1 libss2_1.42.13-1 libssl1.0.2_1.0.2f-2 libstdc++-5-dev_5.3.1-7+rpi1 libstdc++6_5.3.1-7+rpi1 libsystemd0_228-4 libsz2_0.3.2-1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20151024-2 libubsan0_5.3.1-7+rpi1 libudev1_228-4 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-28 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-1 libxml2_2.9.3+dfsg1-1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_4.1+Debian13+rpi1+nmu1 make_4.0-8.2 makedev_2.3.1-93 man-db_2.7.5-1 manpages_4.04-0.1 mawk_1.3.3-17 mime-support_3.59 mount_2.27.1-1 multiarch-support_2.21-6 ncurses-base_6.0+20151024-2 ncurses-bin_6.0+20151024-2 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.1-4 perl-base_5.22.1-4 perl-modules-5.22_5.22.1-4 plymouth_0.9.2-3 po-debconf_1.0.19 procps_2:3.3.11-3 python_2.7.11-1 python-all_2.7.11-1 python-all-dev_2.7.11-1 python-decorator_4.0.6-1 python-dev_2.7.11-1 python-h5py_2.5.0-1+b1 python-minimal_2.7.11-1 python-networkx_1.11~rc1-1 python-numpy_1:1.10.4-2 python-pbcore_1.2.7+dfsg-1 python-pkg-resources_18.8-1 python-pysam_0.8.4+ds-1 python-setuptools_18.8-1 python-six_1.10.0-1 python2.7_2.7.11-3 python2.7-dev_2.7.11-3 python2.7-minimal_2.7.11-3 python3_3.5.1-1 python3-minimal_3.5.1-1 python3.5_3.5.1-5 python3.5-minimal_3.5.1-5 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 rename_0.20-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-falconkit-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_228-4 systemd-sysv_228-4 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 tar_1.28-2.1 tzdata_2015g-1 udev_228-4 util-linux_2.27.1-1 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Tue Dec 22 08:11:57 2015 UTC using RSA key ID D1C646D1
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./falconkit_0.1.3+20140820-1.dsc
dpkg-source: info: extracting falconkit in falconkit-0.1.3+20140820
dpkg-source: info: unpacking falconkit_0.1.3+20140820.orig.tar.gz
dpkg-source: info: unpacking falconkit_0.1.3+20140820-1.debian.tar.xz
dpkg-source: info: applying add-shebang-lines.patch
dpkg-source: info: applying python-multiarch.patch
Check disc space
────────────────
Sufficient free space for build
User Environment
────────────────
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-69f4bda9-be29-4802-bbd1-7e273b324569
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package falconkit
dpkg-buildpackage: source version 0.1.3+20140820-1
dpkg-buildpackage: source distribution unstable
dpkg-source --before-build falconkit-0.1.3+20140820
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
LC_ALL=C.UTF-8 dh clean --with python2 --buildsystem=pybuild
dh_testdir -O--buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:184: python2.7 setup.py clean
running clean
removing '/«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build' (and everything under it)
'build/bdist.linux-armv7l' does not exist -- can't clean it
'build/scripts-2.7' does not exist -- can't clean it
dh_clean -O--buildsystem=pybuild
debian/rules build-arch
LC_ALL=C.UTF-8 dh build-arch --with python2 --buildsystem=pybuild
dh_testdir -a -O--buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:184: python2.7 setup.py config
running config
dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:184: /usr/bin/python setup.py build
running build
running build_py
creating /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build/falcon_kit
copying src/py/__init__.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build/falcon_kit
copying src/py/falcon_kit.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build/falcon_kit
running build_ext
building 'falcon_kit.DW_align' extension
creating build
creating build/temp.linux-armv7l-2.7
creating build/temp.linux-armv7l-2.7/src
creating build/temp.linux-armv7l-2.7/src/c
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/c/DW_banded.c -o build/temp.linux-armv7l-2.7/src/c/DW_banded.o
src/c/DW_banded.c: In function ‘align’:
src/c/DW_banded.c:172:43: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
if ( k == min_k || k != max_k && V[ k - 1 + k_offset ] < V[ k + 1 + k_offset] ) {
^
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-2.7/src/c/DW_banded.o -o /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build/falcon_kit/DW_align.so -fPIC -O3
building 'falcon_kit.kmer_lookup' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/c/kmer_lookup.c -o build/temp.linux-armv7l-2.7/src/c/kmer_lookup.o
src/c/kmer_lookup.c: In function ‘allocate_kmer_lookup’:
src/c/kmer_lookup.c:73:16: warning: unused variable ‘i’ [-Wunused-variable]
seq_coor_t i;
^
src/c/kmer_lookup.c: In function ‘init_seq_array’:
src/c/kmer_lookup.c:105:5: warning: statement with no effect [-Wunused-value]
for (i=0; i++; i<size) {
^
src/c/kmer_lookup.c: In function ‘find_best_aln_range’:
src/c/kmer_lookup.c:316:16: warning: unused variable ‘kmer_dist’ [-Wunused-variable]
seq_coor_t kmer_dist;
^
src/c/kmer_lookup.c:315:16: warning: unused variable ‘max_end’ [-Wunused-variable]
seq_coor_t max_end;
^
src/c/kmer_lookup.c:314:16: warning: unused variable ‘max_start’ [-Wunused-variable]
seq_coor_t max_start;
^
src/c/kmer_lookup.c:313:16: warning: unused variable ‘cur_pos’ [-Wunused-variable]
seq_coor_t cur_pos;
^
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-2.7/src/c/kmer_lookup.o -o /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build/falcon_kit/kmer_lookup.so -fPIC -O3
building 'falcon_kit.falcon' extension
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/c/DW_banded.c -o build/temp.linux-armv7l-2.7/src/c/DW_banded.o
src/c/DW_banded.c: In function ‘align’:
src/c/DW_banded.c:172:43: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
if ( k == min_k || k != max_k && V[ k - 1 + k_offset ] < V[ k + 1 + k_offset] ) {
^
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/c/kmer_lookup.c -o build/temp.linux-armv7l-2.7/src/c/kmer_lookup.o
src/c/kmer_lookup.c: In function ‘allocate_kmer_lookup’:
src/c/kmer_lookup.c:73:16: warning: unused variable ‘i’ [-Wunused-variable]
seq_coor_t i;
^
src/c/kmer_lookup.c: In function ‘init_seq_array’:
src/c/kmer_lookup.c:105:5: warning: statement with no effect [-Wunused-value]
for (i=0; i++; i<size) {
^
src/c/kmer_lookup.c: In function ‘find_best_aln_range’:
src/c/kmer_lookup.c:316:16: warning: unused variable ‘kmer_dist’ [-Wunused-variable]
seq_coor_t kmer_dist;
^
src/c/kmer_lookup.c:315:16: warning: unused variable ‘max_end’ [-Wunused-variable]
seq_coor_t max_end;
^
src/c/kmer_lookup.c:314:16: warning: unused variable ‘max_start’ [-Wunused-variable]
seq_coor_t max_start;
^
src/c/kmer_lookup.c:313:16: warning: unused variable ‘cur_pos’ [-Wunused-variable]
seq_coor_t cur_pos;
^
arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/c/falcon.c -o build/temp.linux-armv7l-2.7/src/c/falcon.o
src/c/falcon.c: In function ‘get_align_tags’:
src/c/falcon.c:96:10: warning: unused variable ‘t_base’ [-Wunused-variable]
char t_base;
^
src/c/falcon.c:95:10: warning: unused variable ‘q_base’ [-Wunused-variable]
char q_base;
^
src/c/falcon.c: In function ‘get_cns_from_align_tags’:
src/c/falcon.c:192:29: warning: unused variable ‘max_cov_score’ [-Wunused-variable]
unsigned int cov_score, max_cov_score;
^
src/c/falcon.c:192:18: warning: unused variable ‘cov_score’ [-Wunused-variable]
unsigned int cov_score, max_cov_score;
^
src/c/falcon.c:191:32: warning: unused variable ‘max_start’ [-Wunused-variable]
seq_coor_t c_start, c_end, max_start;
^
src/c/falcon.c:191:25: warning: unused variable ‘c_end’ [-Wunused-variable]
seq_coor_t c_start, c_end, max_start;
^
src/c/falcon.c:191:16: warning: unused variable ‘c_start’ [-Wunused-variable]
seq_coor_t c_start, c_end, max_start;
^
src/c/falcon.c:180:29: warning: unused variable ‘tmp_pos’ [-Wunused-variable]
seq_coor_t i, j, t_pos, tmp_pos;
^
src/c/falcon.c: In function ‘generate_consensus’:
src/c/falcon.c:399:13: warning: implicit declaration of function ‘free_kmer_match’ [-Wimplicit-function-declaration]
free_kmer_match( kmer_match_ptr);
^
src/c/falcon.c:360:20: warning: unused variable ‘tags’ [-Wunused-variable]
align_tags_t * tags;
^
src/c/falcon.c:357:17: warning: unused variable ‘arange_’ [-Wunused-variable]
aln_range * arange_;
^
src/c/falcon.c:350:24: warning: unused variable ‘k’ [-Wunused-variable]
unsigned int i, j, k;
^
src/c/falcon.c:350:18: warning: unused variable ‘i’ [-Wunused-variable]
unsigned int i, j, k;
^
src/c/falcon.c: In function ‘generate_utg_consensus’:
src/c/falcon.c:458:20: warning: unused variable ‘tags’ [-Wunused-variable]
align_tags_t * tags;
^
src/c/falcon.c:453:24: warning: unused variable ‘k’ [-Wunused-variable]
unsigned int i, j, k;
^
src/c/falcon.c:453:18: warning: unused variable ‘i’ [-Wunused-variable]
unsigned int i, j, k;
^
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-2.7/src/c/DW_banded.o build/temp.linux-armv7l-2.7/src/c/kmer_lookup.o build/temp.linux-armv7l-2.7/src/c/falcon.o -o /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build/falcon_kit/falcon.so -fPIC -O3
running build_scripts
creating build/scripts-2.7
copying and adjusting src/py_scripts/falcon_asm.py -> build/scripts-2.7
copying and adjusting src/py_scripts/falcon_asm_dev.py -> build/scripts-2.7
copying and adjusting src/py_scripts/falcon_overlap.py -> build/scripts-2.7
copying and adjusting src/py_scripts/falcon_overlap2.py -> build/scripts-2.7
copying and adjusting src/py_scripts/falcon_qrm.py -> build/scripts-2.7
copying and adjusting src/py_scripts/falcon_fixasm.py -> build/scripts-2.7
copying and adjusting src/py_scripts/falcon_dedup.py -> build/scripts-2.7
copying and adjusting src/py_scripts/falcon_ucns_data.py -> build/scripts-2.7
copying and adjusting src/py_scripts/falcon_utgcns.py -> build/scripts-2.7
copying and adjusting src/py_scripts/falcon_sense.py -> build/scripts-2.7
copying and adjusting src/py_scripts/get_rdata.py -> build/scripts-2.7
copying and adjusting src/py_scripts/remove_dup_ctg.py -> build/scripts-2.7
changing mode of build/scripts-2.7/falcon_asm.py from 664 to 775
changing mode of build/scripts-2.7/falcon_asm_dev.py from 664 to 775
changing mode of build/scripts-2.7/falcon_overlap.py from 664 to 775
changing mode of build/scripts-2.7/falcon_overlap2.py from 664 to 775
changing mode of build/scripts-2.7/falcon_qrm.py from 664 to 775
changing mode of build/scripts-2.7/falcon_fixasm.py from 664 to 775
changing mode of build/scripts-2.7/falcon_dedup.py from 664 to 775
changing mode of build/scripts-2.7/falcon_ucns_data.py from 664 to 775
changing mode of build/scripts-2.7/falcon_utgcns.py from 664 to 775
changing mode of build/scripts-2.7/falcon_sense.py from 664 to 775
changing mode of build/scripts-2.7/get_rdata.py from 664 to 775
changing mode of build/scripts-2.7/remove_dup_ctg.py from 664 to 775
dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:184: cd /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build; python2.7 -m unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
OK
fakeroot debian/rules binary-arch
LC_ALL=C.UTF-8 dh binary-arch --with python2 --buildsystem=pybuild
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:184: /usr/bin/python setup.py install --root /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit
running install
running build
running build_py
running build_ext
running build_scripts
running install_lib
creating /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr
creating /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib
creating /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib/python2.7
creating /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib/python2.7/dist-packages
creating /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib/python2.7/dist-packages/falcon_kit
copying /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build/falcon_kit/__init__.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib/python2.7/dist-packages/falcon_kit
copying /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build/falcon_kit/falcon_kit.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib/python2.7/dist-packages/falcon_kit
copying /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build/falcon_kit/DW_align.so -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib/python2.7/dist-packages/falcon_kit
copying /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build/falcon_kit/kmer_lookup.so -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib/python2.7/dist-packages/falcon_kit
copying /«BUILDDIR»/falconkit-0.1.3+20140820/.pybuild/pythonX.Y_2.7/build/falcon_kit/falcon.so -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib/python2.7/dist-packages/falcon_kit
byte-compiling /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib/python2.7/dist-packages/falcon_kit/__init__.py to __init__.pyc
byte-compiling /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib/python2.7/dist-packages/falcon_kit/falcon_kit.py to falcon_kit.pyc
running install_egg_info
running egg_info
creating falcon_kit.egg-info
writing requirements to falcon_kit.egg-info/requires.txt
writing falcon_kit.egg-info/PKG-INFO
writing top-level names to falcon_kit.egg-info/top_level.txt
writing dependency_links to falcon_kit.egg-info/dependency_links.txt
writing manifest file 'falcon_kit.egg-info/SOURCES.txt'
reading manifest file 'falcon_kit.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'falcon_kit.egg-info/SOURCES.txt'
Copying falcon_kit.egg-info to /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/lib/python2.7/dist-packages/falcon_kit-0.1.3.egg-info
Skipping SOURCES.txt
running install_scripts
creating /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/falcon_asm.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/falcon_asm_dev.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/falcon_overlap.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/falcon_overlap2.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/falcon_qrm.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/falcon_fixasm.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/falcon_dedup.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/falcon_ucns_data.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/falcon_utgcns.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/falcon_sense.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/get_rdata.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
copying build/scripts-2.7/remove_dup_ctg.py -> /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/falcon_asm.py to 775
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/falcon_asm_dev.py to 775
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/falcon_overlap.py to 775
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/falcon_overlap2.py to 775
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/falcon_qrm.py to 775
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/falcon_fixasm.py to 775
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/falcon_dedup.py to 775
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/falcon_ucns_data.py to 775
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/falcon_utgcns.py to 775
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/falcon_sense.py to 775
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/get_rdata.py to 775
changing mode of /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/remove_dup_ctg.py to 775
debian/rules override_dh_install
make[1]: Entering directory '/«BUILDDIR»/falconkit-0.1.3+20140820'
dh_install
rename 's/\.py//' /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/*
make[1]: Leaving directory '/«BUILDDIR»/falconkit-0.1.3+20140820'
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_installexamples -a -O--buildsystem=pybuild
dh_installman -a -O--buildsystem=pybuild
dh_python2 -a -O--buildsystem=pybuild
I: dh_python2 fs:328: renaming DW_align.so to DW_align.arm-linux-gnueabihf.so
I: dh_python2 fs:328: renaming falcon.so to falcon.arm-linux-gnueabihf.so
I: dh_python2 fs:328: renaming kmer_lookup.so to kmer_lookup.arm-linux-gnueabihf.so
dh_perl -a -O--buildsystem=pybuild
debian/rules override_dh_link
make[1]: Entering directory '/«BUILDDIR»/falconkit-0.1.3+20140820'
for script in /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/bin/*; \
do \
ln -s falconkit.1 /«BUILDDIR»/falconkit-0.1.3+20140820/debian/falconkit/usr/share/man/man1/`basename $script.1`; \
done
dh_link
make[1]: Leaving directory '/«BUILDDIR»/falconkit-0.1.3+20140820'
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
debian/rules override_dh_fixperms
make[1]: Entering directory '/«BUILDDIR»/falconkit-0.1.3+20140820'
chmod -x debian/falconkit/usr/share/doc/falconkit/examples/HBAR.cfg
chmod -x debian/falconkit/usr/share/doc/falconkit/examples/test_data/*.fofn
dh_fixperms
make[1]: Leaving directory '/«BUILDDIR»/falconkit-0.1.3+20140820'
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: package falconkit: unused substitution variable ${python:Versions}
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: package falconkit: unused substitution variable ${python:Versions}
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'falconkit-dbgsym' in '../falconkit-dbgsym_0.1.3+20140820-1_armhf.deb'.
dpkg-deb: building package 'falconkit' in '../falconkit_0.1.3+20140820-1_armhf.deb'.
dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../falconkit_0.1.3+20140820-1_armhf.changes
dpkg-genchanges: warning: package falconkit-dbgsym listed in files list but not in control info
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build falconkit-0.1.3+20140820
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20160201-0149
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build Chroot │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
falconkit_0.1.3+20140820-1_armhf.changes:
─────────────────────────────────────────
Format: 1.8
Date: Mon, 21 Dec 2015 22:33:31 -0800
Source: falconkit
Binary: falconkit
Architecture: armhf
Version: 0.1.3+20140820-1
Distribution: stretch-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Afif Elghraoui <afif@ghraoui.name>
Description:
falconkit - genome assembly toolkit
Closes: 808708
Changes:
falconkit (0.1.3+20140820-1) unstable; urgency=low
.
* Initial release from git4a8f86f (Closes: #808708)
Checksums-Sha1:
e33943f88a4e5d0c72ad3c216575a49a4c0f532a 27592 falconkit-dbgsym_0.1.3+20140820-1_armhf.deb
5296f4d7a2f19e6deb311646cac7e35a95814ff6 57412 falconkit_0.1.3+20140820-1_armhf.deb
Checksums-Sha256:
7ceecaa1c3b88ea643dbd56fafc16c68b72ce2e15754d6a14c8ab9b276c137d0 27592 falconkit-dbgsym_0.1.3+20140820-1_armhf.deb
e342811c0cd501b5e705450e8c275ab2af182a5dba303d37a5b0ea3745dcde12 57412 falconkit_0.1.3+20140820-1_armhf.deb
Files:
41c947bfae5002a0f17491795963faf0 27592 debug extra falconkit-dbgsym_0.1.3+20140820-1_armhf.deb
b6167cba388cad6d225f4149a5da3a6b 57412 science optional falconkit_0.1.3+20140820-1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
falconkit-dbgsym_0.1.3+20140820-1_armhf.deb
───────────────────────────────────────────
new debian package, version 2.0.
size 27592 bytes: control archive=628 bytes.
529 bytes, 13 lines control
318 bytes, 3 lines md5sums
Package: falconkit-dbgsym
Source: falconkit
Version: 0.1.3+20140820-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 52
Depends: falconkit (= 0.1.3+20140820-1)
Section: debug
Priority: extra
Homepage: https://github.com/PacificBiosciences/FALCON
Description: Debug symbols for falconkit
Auto-Built-Package: debug-symbols
Build-Ids: 3d7f00526a675400f5998e24acb2e4f4722013f3 707377525b5749e9236e09a3fafd053b6240e25a 7d2b87bd69032a8160818c6493ba9243aabd1031
drwxr-xr-x root/root 0 2016-02-01 01:49 ./
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/lib/
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/lib/debug/
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/lib/debug/.build-id/3d/
-rw-r--r-- root/root 9076 2016-02-01 01:49 ./usr/lib/debug/.build-id/3d/7f00526a675400f5998e24acb2e4f4722013f3.debug
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/lib/debug/.build-id/70/
-rw-r--r-- root/root 10952 2016-02-01 01:49 ./usr/lib/debug/.build-id/70/7377525b5749e9236e09a3fafd053b6240e25a.debug
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/lib/debug/.build-id/7d/
-rw-r--r-- root/root 19560 2016-02-01 01:49 ./usr/lib/debug/.build-id/7d/2b87bd69032a8160818c6493ba9243aabd1031.debug
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/share/
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/share/doc/
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/doc/falconkit-dbgsym -> falconkit
falconkit_0.1.3+20140820-1_armhf.deb
────────────────────────────────────
new debian package, version 2.0.
size 57412 bytes: control archive=1980 bytes.
608 bytes, 13 lines control
2965 bytes, 38 lines md5sums
157 bytes, 9 lines * postinst #!/bin/sh
253 bytes, 14 lines * prerm #!/bin/sh
Package: falconkit
Version: 0.1.3+20140820-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 286
Depends: libc6 (>= 2.4), python (<< 2.8), python (>= 2.7~), python-networkx, python-pbcore, python:any (>= 2.7.5-5~), python-numpy, mummer
Section: science
Priority: optional
Homepage: https://github.com/PacificBiosciences/FALCON
Description: genome assembly toolkit
Falcon is a set of tools for fast aligning long reads for consensus
and assembly. It is a simple code collection for efficient assembly of
haploid and diploid genomes.
drwxr-xr-x root/root 0 2016-02-01 01:49 ./
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/bin/
-rwxr-xr-x root/root 43325 2016-02-01 01:48 ./usr/bin/falcon_asm
-rwxr-xr-x root/root 37936 2016-02-01 01:48 ./usr/bin/falcon_asm_dev
-rwxr-xr-x root/root 3604 2016-02-01 01:48 ./usr/bin/falcon_dedup
-rwxr-xr-x root/root 7677 2016-02-01 01:48 ./usr/bin/falcon_fixasm
-rwxr-xr-x root/root 11624 2016-02-01 01:48 ./usr/bin/falcon_overlap
-rwxr-xr-x root/root 12061 2016-02-01 01:48 ./usr/bin/falcon_overlap2
-rwxr-xr-x root/root 12328 2016-02-01 01:48 ./usr/bin/falcon_qrm
-rwxr-xr-x root/root 10095 2016-02-01 01:48 ./usr/bin/falcon_sense
-rwxr-xr-x root/root 4030 2016-02-01 01:48 ./usr/bin/falcon_ucns_data
-rwxr-xr-x root/root 4833 2016-02-01 01:48 ./usr/bin/falcon_utgcns
-rwxr-xr-x root/root 6852 2016-02-01 01:48 ./usr/bin/get_rdata
-rwxr-xr-x root/root 3089 2016-02-01 01:48 ./usr/bin/remove_dup_ctg
drwxr-xr-x root/root 0 2016-02-01 01:48 ./usr/lib/
drwxr-xr-x root/root 0 2016-02-01 01:48 ./usr/lib/python2.7/
drwxr-xr-x root/root 0 2016-02-01 01:48 ./usr/lib/python2.7/dist-packages/
drwxr-xr-x root/root 0 2016-02-01 01:48 ./usr/lib/python2.7/dist-packages/falcon_kit-0.1.3.egg-info/
-rw-r--r-- root/root 270 2016-02-01 01:48 ./usr/lib/python2.7/dist-packages/falcon_kit-0.1.3.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2016-02-01 01:48 ./usr/lib/python2.7/dist-packages/falcon_kit-0.1.3.egg-info/dependency_links.txt
-rw-r--r-- root/root 1 2016-02-01 01:48 ./usr/lib/python2.7/dist-packages/falcon_kit-0.1.3.egg-info/not-zip-safe
-rw-r--r-- root/root 0 2016-02-01 01:49 ./usr/lib/python2.7/dist-packages/falcon_kit-0.1.3.egg-info/requires.txt
-rw-r--r-- root/root 11 2016-02-01 01:48 ./usr/lib/python2.7/dist-packages/falcon_kit-0.1.3.egg-info/top_level.txt
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/lib/python2.7/dist-packages/falcon_kit/
-rw-r--r-- root/root 9584 2016-02-01 01:49 ./usr/lib/python2.7/dist-packages/falcon_kit/DW_align.arm-linux-gnueabihf.so
-rw-r--r-- root/root 1926 2014-08-20 13:31 ./usr/lib/python2.7/dist-packages/falcon_kit/__init__.py
-rw-r--r-- root/root 17808 2016-02-01 01:49 ./usr/lib/python2.7/dist-packages/falcon_kit/falcon.arm-linux-gnueabihf.so
-rw-r--r-- root/root 7495 2016-02-01 01:48 ./usr/lib/python2.7/dist-packages/falcon_kit/falcon_kit.py
-rw-r--r-- root/root 9584 2016-02-01 01:49 ./usr/lib/python2.7/dist-packages/falcon_kit/kmer_lookup.arm-linux-gnueabihf.so
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/share/
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/share/doc/falconkit/
-rw-r--r-- root/root 297 2015-12-22 08:09 ./usr/share/doc/falconkit/README.Debian
-rw-r--r-- root/root 3453 2014-08-20 13:31 ./usr/share/doc/falconkit/README.md.gz
-rw-r--r-- root/root 172 2015-12-22 08:09 ./usr/share/doc/falconkit/changelog.Debian.gz
-rw-r--r-- root/root 2038 2015-12-22 08:09 ./usr/share/doc/falconkit/copyright
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/share/doc/falconkit/examples/
-rw-r--r-- root/root 3254 2014-08-20 13:31 ./usr/share/doc/falconkit/examples/Dmel_asm.md.gz
-rw-r--r-- root/root 2211 2014-08-20 13:31 ./usr/share/doc/falconkit/examples/HBAR.cfg
-rw-r--r-- root/root 573 2014-08-20 13:31 ./usr/share/doc/falconkit/examples/StarCluster.cfg
-rw-r--r-- root/root 2791 2014-08-20 13:31 ./usr/share/doc/falconkit/examples/install_note.sh
-rw-r--r-- root/root 3230 2014-08-20 13:31 ./usr/share/doc/falconkit/examples/readme.md
-rw-r--r-- root/root 1133 2014-08-20 13:31 ./usr/share/doc/falconkit/examples/run_asm.sh
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/share/doc/falconkit/examples/test_data/
-rw-r--r-- root/root 2845 2014-08-20 13:31 ./usr/share/doc/falconkit/examples/test_data/t1.fa.gz
-rw-r--r-- root/root 8 2014-08-20 13:31 ./usr/share/doc/falconkit/examples/test_data/t1.fofn
-rw-r--r-- root/root 9340 2014-08-20 13:31 ./usr/share/doc/falconkit/examples/test_data/t2.fa.gz
-rw-r--r-- root/root 8 2014-08-20 13:31 ./usr/share/doc/falconkit/examples/test_data/t2.fofn
-rw-r--r-- root/root 2533 2014-08-20 13:31 ./usr/share/doc/falconkit/file_format_note.md.gz
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/share/man/
drwxr-xr-x root/root 0 2016-02-01 01:49 ./usr/share/man/man1/
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/falcon_asm.1.gz -> falconkit.1.gz
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/falcon_asm_dev.1.gz -> falconkit.1.gz
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/falcon_dedup.1.gz -> falconkit.1.gz
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/falcon_fixasm.1.gz -> falconkit.1.gz
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/falcon_overlap.1.gz -> falconkit.1.gz
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/falcon_overlap2.1.gz -> falconkit.1.gz
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/falcon_qrm.1.gz -> falconkit.1.gz
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/falcon_sense.1.gz -> falconkit.1.gz
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/falcon_ucns_data.1.gz -> falconkit.1.gz
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/falcon_utgcns.1.gz -> falconkit.1.gz
-rw-r--r-- root/root 509 2016-02-01 01:49 ./usr/share/man/man1/falconkit.1.gz
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/get_rdata.1.gz -> falconkit.1.gz
lrwxrwxrwx root/root 0 2016-02-01 01:49 ./usr/share/man/man1/remove_dup_ctg.1.gz -> falconkit.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 1432
Build-Time: 64
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 558
Job: falconkit_0.1.3+20140820-1
Machine Architecture: armhf
Package: falconkit
Package-Time: 664
Source-Version: 0.1.3+20140820-1
Space: 1432
Status: successful
Version: 0.1.3+20140820-1
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Finished at 20160201-0149
Build needed 00:11:04, 1432k disc space