Raspbian Package Auto-Building

Build log for delly (0.9.1-1) on armhf

delly0.9.1-1armhf → 2022-01-22 06:53:37

sbuild (Debian sbuild) 0.78.1 (09 February 2019) on test2019

+==============================================================================+
| delly 0.9.1-1 (armhf)                        Sat, 22 Jan 2022 06:42:40 +0000 |
+==============================================================================+

Package: delly
Version: 0.9.1-1
Source Version: 0.9.1-1
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bookworm-staging-armhf-sbuild-fc9210b4-f279-49cf-998c-20ab6a27bc53' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/delly-Yw1eAY/resolver-qVdwCd' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [12.7 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [13.6 MB]
Fetched 26.3 MB in 14s (1916 kB/s)
Reading package lists...

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'delly' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/delly.git
Please use:
git clone https://salsa.debian.org/med-team/delly.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 137 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main delly 0.9.1-1 (dsc) [2088 B]
Get:2 http://172.17.4.1/private bookworm-staging/main delly 0.9.1-1 (tar) [131 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main delly 0.9.1-1 (diff) [4276 B]
Fetched 137 kB in 0s (791 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/delly-Yw1eAY/delly-0.9.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/delly-Yw1eAY' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), libboost-date-time-dev, libboost-program-options-dev, libboost-system-dev, libboost-filesystem-dev, libboost-iostreams-dev, libhts-dev, libbz2-dev, zlib1g-dev, chrpath, debhelper, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), libboost-date-time-dev, libboost-program-options-dev, libboost-system-dev, libboost-filesystem-dev, libboost-iostreams-dev, libhts-dev, libbz2-dev, zlib1g-dev, chrpath, debhelper, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [957 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [438 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [521 B]
Fetched 1916 B in 0s (34.4 kB/s)
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils bzip2 chrpath
  debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext
  gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
  libboost-date-time-dev libboost-date-time1.74-dev libboost-date-time1.74.0
  libboost-filesystem-dev libboost-filesystem1.74-dev
  libboost-filesystem1.74.0 libboost-iostreams-dev libboost-iostreams1.74-dev
  libboost-iostreams1.74.0 libboost-program-options-dev
  libboost-program-options1.74-dev libboost-program-options1.74.0
  libboost-regex1.74-dev libboost-regex1.74.0 libboost-serialization1.74-dev
  libboost-serialization1.74.0 libboost-system-dev libboost-system1.74-dev
  libboost-system1.74.0 libboost1.74-dev libbrotli1 libbz2-1.0 libbz2-dev
  libcurl3-gnutls libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev
  libdeflate0 libelf1 libfile-stripnondeterminism-perl libhts-dev libhts3
  libhtscodecs2 libicu-dev libicu67 liblzma-dev libmagic-mgc libmagic1
  libnghttp2-14 libpipeline1 libpsl5 librtmp1 libsigsegv2 libssh2-1
  libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf
  zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc bzip2-doc dh-make gettext-doc
  libasprintf-dev libgettextpo-dev groff libboost1.74-doc
  libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev
  libboost-context1.74-dev libboost-contract1.74-dev
  libboost-coroutine1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev
  libboost-graph1.74-dev libboost-graph-parallel1.74-dev
  libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev
  libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev
  libboost-python1.74-dev libboost-random1.74-dev libboost-stacktrace1.74-dev
  libboost-test1.74-dev libboost-thread1.74-dev libboost-timer1.74-dev
  libboost-type-erasure1.74-dev libboost-wave1.74-dev libboost1.74-tools-dev
  libmpfrc++-dev libntl-dev libboost-nowide1.74-dev libcurl4-doc
  libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev
  libssh2-1-dev pkg-config icu-doc liblzma-doc libtool-doc gfortran
  | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
  libmail-box-perl
Recommended packages:
  curl | wget | lynx bzip2-doc ca-certificates libarchive-cpio-perl
  publicsuffix libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdextrautils chrpath debhelper
  dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
  groff-base icu-devtools intltool-debian libarchive-zip-perl
  libboost-date-time-dev libboost-date-time1.74-dev libboost-date-time1.74.0
  libboost-filesystem-dev libboost-filesystem1.74-dev
  libboost-filesystem1.74.0 libboost-iostreams-dev libboost-iostreams1.74-dev
  libboost-iostreams1.74.0 libboost-program-options-dev
  libboost-program-options1.74-dev libboost-program-options1.74.0
  libboost-regex1.74-dev libboost-regex1.74.0 libboost-serialization1.74-dev
  libboost-serialization1.74.0 libboost-system-dev libboost-system1.74-dev
  libboost-system1.74.0 libboost1.74-dev libbrotli1 libbz2-dev libcurl3-gnutls
  libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0 libelf1
  libfile-stripnondeterminism-perl libhts-dev libhts3 libhtscodecs2 libicu-dev
  libicu67 liblzma-dev libmagic-mgc libmagic1 libnghttp2-14 libpipeline1
  libpsl5 librtmp1 libsigsegv2 libssh2-1 libsub-override-perl libtool
  libuchardet0 libxml2 m4 man-db po-debconf sbuild-build-depends-main-dummy
  zlib1g-dev
The following packages will be upgraded:
  bzip2 libbz2-1.0
2 upgraded, 69 newly installed, 0 to remove and 67 not upgraded.
Need to get 47.3 MB of archives.
After this operation, 298 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [944 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf bzip2 armhf 1.0.8-5 [47.2 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libbz2-1.0 armhf 1.0.8-5 [43.1 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-8 [793 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.37.2-6 [136 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.5-1 [32.9 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.9.4-4 [1308 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-2 [295 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-2 [119 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-2 [65.8 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-4 [171 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf libsigsegv2 armhf 2.13-1 [34.3 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.1 [823 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-4 [510 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf chrpath armhf 0.16-2 [15.4 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.6 [193 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.6-15 [513 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-1 [15.8 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.186-1 [174 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14-1 [83.0 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf libicu67 armhf 67.1-7 [8291 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.12+dfsg-5 [584 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-4 [1215 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.6 [1054 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf icu-devtools armhf 67.1-7 [172 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf libboost1.74-dev armhf 1.74.0-14 [9533 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf libboost-date-time1.74.0 armhf 1.74.0-14 [242 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf libboost-serialization1.74.0 armhf 1.74.0-14 [319 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf libboost-serialization1.74-dev armhf 1.74.0-14 [387 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf libboost-date-time1.74-dev armhf 1.74.0-14 [251 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf libboost-date-time-dev armhf 1.74.0.3+b2 [4604 B]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf libboost-filesystem1.74.0 armhf 1.74.0-14 [274 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf libboost-system1.74.0 armhf 1.74.0-14 [242 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf libboost-system1.74-dev armhf 1.74.0-14 [243 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf libboost-filesystem1.74-dev armhf 1.74.0-14 [285 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf libboost-filesystem-dev armhf 1.74.0.3+b2 [4636 B]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf libboost-regex1.74.0 armhf 1.74.0-14 [449 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf libicu-dev armhf 67.1-7 [9228 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf libboost-regex1.74-dev armhf 1.74.0-14 [551 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf libboost-iostreams1.74.0 armhf 1.74.0-14 [260 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf libboost-iostreams1.74-dev armhf 1.74.0-14 [269 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf libboost-iostreams-dev armhf 1.74.0.3+b2 [4588 B]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf libboost-program-options1.74.0 armhf 1.74.0-14 [334 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf libboost-program-options1.74-dev armhf 1.74.0-14 [373 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libboost-program-options-dev armhf 1.74.0.3+b2 [4616 B]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf libboost-system-dev armhf 1.74.0.3+b2 [4740 B]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b1 [261 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf libbz2-dev armhf 1.0.8-5 [26.8 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libnghttp2-14 armhf 1.43.0-1 [65.3 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf libpsl5 armhf 0.21.0-1.2 [56.2 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf libssh2-1 armhf 1.10.0-2 [161 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf libcurl3-gnutls armhf 7.81.0-1 [315 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf libcurl4-gnutls-dev armhf 7.81.0-1 [391 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf libdeflate0 armhf 1.8-1 [44.1 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf libdeflate-dev armhf 1.8-1 [40.4 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf libhtscodecs2 armhf 1.1.1-3 [49.8 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf libhts3 armhf 1.13+ds-2 [339 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf liblzma-dev armhf 5.2.5-2 [219 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf libhts-dev armhf 1.13+ds-2 [4049 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 47.3 MB in 10s (4762 kB/s)
(Reading database ... 12552 files and directories currently installed.)
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Setting up autotools-dev (20180224.1+nmu1) ...
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Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
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Setting up libsigsegv2:armhf (2.13-1) ...
Setting up libboost-regex1.74.0:armhf (1.74.0-14) ...
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Setting up icu-devtools (67.1-7) ...
Setting up liblzma-dev:armhf (5.2.5-2) ...
Setting up libboost-serialization1.74.0:armhf (1.74.0-14) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libssh2-1:armhf (1.10.0-2) ...
Setting up libboost-filesystem1.74-dev:armhf (1.74.0-14) ...
Setting up libboost-date-time1.74.0:armhf (1.74.0-14) ...
Setting up libdeflate-dev:armhf (1.8-1) ...
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Setting up libxml2:armhf (2.9.12+dfsg-5) ...
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Setting up libfile-stripnondeterminism-perl (1.13.0-1) ...
Setting up gettext (0.21-4) ...
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Setting up libboost-system-dev:armhf (1.74.0.3+b2) ...
Setting up m4 (1.4.18-5) ...
Setting up libcurl3-gnutls:armhf (7.81.0-1) ...
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Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up autoconf (2.71-2) ...
Setting up libboost-serialization1.74-dev:armhf (1.74.0-14) ...
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Setting up dwz (0.14-1) ...
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Setting up groff-base (1.22.4-8) ...
Setting up automake (1:1.16.5-1.1) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libhts3:armhf (1.13+ds-2) ...
Setting up po-debconf (1.0.21+nmu1) ...
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Setting up man-db (2.9.4-4) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libboost-iostreams1.74-dev:armhf (1.74.0-14) ...
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Setting up debhelper (13.6) ...
Setting up libboost-iostreams-dev:armhf (1.74.0.3+b2) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.32-4+rpi1) ...

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.19.20-v7+ #1 SMP Mon Mar 18 11:37:02 GMT 2019 armhf (armv7l)
Toolchain package versions: binutils_2.37-7+rpi1 dpkg-dev_1.20.9+rpi1 g++-11_11.2.0-10+rpi1 gcc-11_11.2.0-10+rpi1 libc6-dev_2.32-4+rpi1 libstdc++-11-dev_11.2.0-10+rpi1 libstdc++6_11.2.0-10+rpi1 linux-libc-dev_5.14.16-1+rpi1
Package versions: adduser_3.118 apt_2.3.13 autoconf_2.71-2 automake_1:1.16.5-1.1 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12+rpi1 base-passwd_3.5.52 bash_5.1-5 binutils_2.37-7+rpi1 binutils-arm-linux-gnueabihf_2.37-7+rpi1 binutils-common_2.37-7+rpi1 bsdextrautils_2.37.2-6 bsdutils_1:2.37.2-4 build-essential_12.9 bzip2_1.0.8-5 chrpath_0.16-2 coreutils_8.32-4.1 cpp_4:11.2.0-2+rpi1 cpp-11_11.2.0-10+rpi1 dash_0.5.11+git20210903+057cd650a4ed-3 debconf_1.5.79 debhelper_13.6 debianutils_4.11.2 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.7-5 dirmngr_2.2.27-2 dpkg_1.20.9+rpi1 dpkg-dev_1.20.9+rpi1 dwz_0.14-1 e2fsprogs_1.46.4-1 fakeroot_1.25.3-1.1 file_1:5.41-2 findutils_4.8.0-1 g++_4:11.2.0-2+rpi1 g++-11_11.2.0-10+rpi1 gcc_4:11.2.0-2+rpi1 gcc-11_11.2.0-10+rpi1 gcc-11-base_11.2.0-10+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-4 gettext-base_0.21-4 gnupg_2.2.27-2 gnupg-l10n_2.2.27-2 gnupg-utils_2.2.27-2 gpg_2.2.27-2 gpg-agent_2.2.27-2 gpg-wks-client_2.2.27-2 gpg-wks-server_2.2.27-2 gpgconf_2.2.27-2 gpgsm_2.2.27-2 gpgv_2.2.27-2 grep_3.7-1 groff-base_1.22.4-8 gzip_1.10-4 hostname_3.23 icu-devtools_67.1-7 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg6.0_2.3.13 libarchive-zip-perl_1.68-1 libasan6_11.2.0-10+rpi1 libassuan0_2.5.5-1 libatomic1_11.2.0-10+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.6-1 libaudit1_1:3.0.6-1 libbinutils_2.37-7+rpi1 libblkid1_2.37.2-4 libboost-date-time-dev_1.74.0.3+b2 libboost-date-time1.74-dev_1.74.0-14 libboost-date-time1.74.0_1.74.0-14 libboost-filesystem-dev_1.74.0.3+b2 libboost-filesystem1.74-dev_1.74.0-14 libboost-filesystem1.74.0_1.74.0-14 libboost-iostreams-dev_1.74.0.3+b2 libboost-iostreams1.74-dev_1.74.0-14 libboost-iostreams1.74.0_1.74.0-14 libboost-program-options-dev_1.74.0.3+b2 libboost-program-options1.74-dev_1.74.0-14 libboost-program-options1.74.0_1.74.0-14 libboost-regex1.74-dev_1.74.0-14 libboost-regex1.74.0_1.74.0-14 libboost-serialization1.74-dev_1.74.0-14 libboost-serialization1.74.0_1.74.0-14 libboost-system-dev_1.74.0.3+b2 libboost-system1.74-dev_1.74.0-14 libboost-system1.74.0_1.74.0-14 libboost1.74-dev_1.74.0-14 libbrotli1_1.0.9-2+b1 libbz2-1.0_1.0.8-5 libbz2-dev_1.0.8-5 libc-bin_2.32-4+rpi1 libc-dev-bin_2.32-4+rpi1 libc6_2.32-4+rpi1 libc6-dev_2.32-4+rpi1 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcc1-0_11.2.0-10+rpi1 libcom-err2_1.46.4-1 libcrypt-dev_1:4.4.26-1 libcrypt1_1:4.4.26-1 libctf-nobfd0_2.37-7+rpi1 libctf0_2.37-7+rpi1 libcurl3-gnutls_7.81.0-1 libcurl4-gnutls-dev_7.81.0-1 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.261 libdebhelper-perl_13.6 libdeflate-dev_1.8-1 libdeflate0_1.8-1 libdpkg-perl_1.20.9+rpi1 libelf1_0.186-1 libext2fs2_1.46.4-1 libfakeroot_1.25.3-1.1 libffi8_3.4.2-3 libfile-stripnondeterminism-perl_1.13.0-1 libgcc-11-dev_11.2.0-10+rpi1 libgcc-s1_11.2.0-10+rpi1 libgcrypt20_1.9.4-3 libgdbm-compat4_1.22-1 libgdbm6_1.22-1 libgmp10_2:6.2.1+dfsg-3 libgnutls30_3.7.2-2 libgomp1_11.2.0-10+rpi1 libgpg-error0_1.42-3 libgssapi-krb5-2_1.18.3-7 libhogweed6_3.7.3-1 libhts-dev_1.13+ds-2 libhts3_1.13+ds-2 libhtscodecs2_1.1.1-3 libicu-dev_67.1-7 libicu67_67.1-7 libidn2-0_2.3.2-2 libisl23_0.24-2 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 libksba8_1.6.0-2 libldap-2.4-2_2.4.59+dfsg-1 liblocale-gettext-perl_1.07-4+b1 liblz4-1_1.9.3-2 liblzma-dev_5.2.5-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.41-2 libmagic1_1:5.41-2 libmount1_2.37.2-4 libmpc3_1.2.1-1 libmpfr6_4.1.0-3 libncursesw6_6.3-1 libnettle8_3.7.3-1 libnghttp2-14_1.43.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-5 libpam-modules_1.4.0-10 libpam-modules-bin_1.4.0-10 libpam-runtime_1.4.0-10 libpam0g_1.4.0-10 libpcre2-8-0_10.39-3 libpcre3_2:8.39-13 libperl5.32_5.32.1-6 libpipeline1_1.5.5-1 libpsl5_0.21.0-1.2 libreadline8_8.1-2 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg2-2 libsasl2-modules-db_2.1.27+dfsg2-2 libseccomp2_2.5.3-2+rpi1 libselinux1_3.3-1 libsemanage-common_3.3-1 libsemanage2_3.3-1 libsepol1_3.1-1 libsepol2_3.3-1 libsigsegv2_2.13-1 libsmartcols1_2.37.2-4 libsqlite3-0_3.36.0-2 libss2_1.46.4-1 libssh2-1_1.10.0-2 libssl1.1_1.1.1l-1 libstdc++-11-dev_11.2.0-10+rpi1 libstdc++6_11.2.0-10+rpi1 libsub-override-perl_0.09-2 libsystemd0_249.7-1+rpi1 libtasn1-6_4.18.0-4 libtext-charwidth-perl_0.04-10+b1 libtext-iconv-perl_1.7-7+b1 libtinfo6_6.3-1 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15 libubsan1_11.2.0-10+rpi1 libuchardet0_0.0.7-1 libudev1_249.7-1+rpi1 libunistring2_0.9.10-6 libuuid1_2.37.2-4 libxml2_2.9.12+dfsg-5 libxxhash0_0.8.0-2+rpi1 libzstd1_1.4.8+dfsg-3+rpi1 linux-libc-dev_5.14.16-1+rpi1 login_1:4.8.1-2 logsave_1.46.4-1 lsb-base_11.1.0+rpi1 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-4 mawk_1.3.4.20200120-2 mount_2.37.2-4 ncurses-base_6.3-1 ncurses-bin_6.3-1 passwd_1:4.8.1-2 patch_2.7.6-7 perl_5.32.1-6 perl-base_5.32.1-6 perl-modules-5.32_5.32.1-6 pinentry-curses_1.1.0-4 po-debconf_1.0.21+nmu1 raspbian-archive-keyring_20120528.2 readline-common_8.1-2 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.00-1 tar_1.34+dfsg-1 tzdata_2021e-1 util-linux_2.37.2-4 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 3.0 (quilt)
Source: delly
Binary: delly
Architecture: any
Version: 0.9.1-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>
Homepage: https://github.com/dellytools/delly
Standards-Version: 4.6.0
Vcs-Browser: https://salsa.debian.org/med-team/delly
Vcs-Git: https://salsa.debian.org/med-team/delly.git
Build-Depends: debhelper-compat (= 13), libboost-date-time-dev, libboost-program-options-dev, libboost-system-dev, libboost-filesystem-dev, libboost-iostreams-dev, libhts-dev, libbz2-dev, zlib1g-dev, chrpath, debhelper
Package-List:
 delly deb science optional arch=any
Checksums-Sha1:
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Files:
 b2bac6537c9235a7e53717b433cfedf8 130709 delly_0.9.1.orig.tar.gz
 ad540bf1de142956e09a09330c3d71eb 4276 delly_0.9.1-1.debian.tar.xz

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gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.EL_orfeT/trustedkeys.kbx': General error
gpgv: Signature made Sun Jan 16 15:41:59 2022 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./delly_0.9.1-1.dsc
dpkg-source: info: extracting delly in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking delly_0.9.1.orig.tar.gz
dpkg-source: info: unpacking delly_0.9.1-1.debian.tar.xz

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/112/bus
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INVOCATION_ID=eccf94643b2d47ad9a476227183f82d3
JOURNAL_STREAM=8:19251
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=117
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-fc9210b4-f279-49cf-998c-20ab6a27bc53
SCHROOT_UID=112
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
XDG_RUNTIME_DIR=/run/user/112
XDG_SESSION_CLASS=background
XDG_SESSION_ID=c122347
XDG_SESSION_TYPE=unspecified

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage -us -uc -mRaspbian pi4 based autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package delly
dpkg-buildpackage: info: source version 0.9.1-1
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
	make -j4 distclean
make[2]: Entering directory '/<<PKGBUILDDIR>>'
if [ -r src/htslib/Makefile ]; then cd src/htslib && make clean; fi
rm -f .htslib src/delly .htslib.o src/delly.o .htslib
rm -f src/delly
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
rm -rf src/dpe src/delly bin/delly
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_clean
 debian/rules binary-arch
dh binary-arch
   dh_update_autotools_config -a
   dh_autoreconf -a
   dh_auto_configure -a
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build -- BUILT_PROGRAMS="src/delly src/dpe" PARALLEL=1
	make -j4 "INSTALL=install --strip-program=true" "BUILT_PROGRAMS=src/delly src/dpe" PARALLEL=1
make[2]: Entering directory '/<<PKGBUILDDIR>>'
if [ -r src/htslib/Makefile ]; then cd src/htslib && autoheader && autoconf && ./configure --disable-s3 --disable-gcs --disable-libcurl --disable-plugins && make && make lib-static && cd ../../ && touch .htslib; fi
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<<PKGBUILDDIR>>/src/htslib/ -pedantic -W -Wall -Wno-unknown-pragmas -D__STDC_LIMIT_MACROS -fno-strict-aliasing -fpermissive -fopenmp -DOPENMP -O3 -fno-tree-vectorize -DNDEBUG src/delly.cpp -o src/delly -Wl,-z,relro -Wl,-z,now -L/<<PKGBUILDDIR>>/src/htslib/ -L/<<PKGBUILDDIR>>/src/htslib//lib -lboost_iostreams -lboost_filesystem -lboost_system -lboost_program_options -lboost_date_time  -lhts -lz -llzma -lbz2 -Wl,-rpath,/<<PKGBUILDDIR>>/src/htslib/
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -isystem /<<PKGBUILDDIR>>/src/htslib/ -pedantic -W -Wall -Wno-unknown-pragmas -D__STDC_LIMIT_MACROS -fno-strict-aliasing -fpermissive -fopenmp -DOPENMP -O3 -fno-tree-vectorize -DNDEBUG src/dpe.cpp -o src/dpe -Wl,-z,relro -Wl,-z,now -L/<<PKGBUILDDIR>>/src/htslib/ -L/<<PKGBUILDDIR>>/src/htslib//lib -lboost_iostreams -lboost_filesystem -lboost_system -lboost_program_options -lboost_date_time  -lhts -lz -llzma -lbz2 -Wl,-rpath,/<<PKGBUILDDIR>>/src/htslib/
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/property_map/vector_property_map.hpp:14,
                 from /usr/include/boost/property_map/property_map.hpp:602,
                 from /usr/include/boost/graph/adjacency_list.hpp:27,
                 from src/dpe.cpp:5:
/usr/include/boost/progress.hpp:23:1: note: ‘#pragma message: This header is deprecated. Use the facilities in <boost/timer/timer.hpp> or <boost/timer/progress_display.hpp> instead.’
   23 | BOOST_HEADER_DEPRECATED( "the facilities in <boost/timer/timer.hpp> or <boost/timer/progress_display.hpp>" )
      | ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/timer.hpp:21:1: note: ‘#pragma message: This header is deprecated. Use the facilities in <boost/timer/timer.hpp> instead.’
   21 | BOOST_HEADER_DEPRECATED( "the facilities in <boost/timer/timer.hpp>" )
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/property_map/vector_property_map.hpp:14,
                 from /usr/include/boost/property_map/property_map.hpp:602,
                 from /usr/include/boost/graph/adjacency_list.hpp:27,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/boost/progress.hpp:23:1: note: ‘#pragma message: This header is deprecated. Use the facilities in <boost/timer/timer.hpp> or <boost/timer/progress_display.hpp> instead.’
   23 | BOOST_HEADER_DEPRECATED( "the facilities in <boost/timer/timer.hpp> or <boost/timer/progress_display.hpp>" )
      | ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/timer.hpp:21:1: note: ‘#pragma message: This header is deprecated. Use the facilities in <boost/timer/timer.hpp> instead.’
   21 | BOOST_HEADER_DEPRECATED( "the facilities in <boost/timer/timer.hpp>" )
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from src/coral.h:18,
                 from src/delly.cpp:22:
src/scan.h: In instantiation of ‘void torali::scan(const TConfig&, const torali::LibraryInfo&, std::vector<std::vector<torali::ScanWindow> >&) [with TConfig = torali::CountDNAConfig]’:
src/coral.h:707:11:   required from here
src/scan.h:99:30: warning: comparison of unsigned expression in ‘>= 0’ is always true [-Wtype-limits]
   99 |             if ((it->lower() >= 0) && (it->upper() < hdr->target_len[refIndex])) {
      |                 ~~~~~~~~~~~~~^~~~~
In file included from /usr/include/c++/11/bits/stl_algobase.h:64,
                 from /usr/include/c++/11/bits/char_traits.h:39,
                 from /usr/include/c++/11/ios:40,
                 from /usr/include/c++/11/ostream:38,
                 from /usr/include/c++/11/iostream:39,
                 from src/delly.cpp:3:
/usr/include/c++/11/bits/stl_pair.h: In instantiation of ‘constexpr std::pair<typename std::__strip_reference_wrapper<typename std::decay<_Tp>::type>::__type, typename std::__strip_reference_wrapper<typename std::decay<_Tp2>::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = float&; _T2 = float&; typename std::__strip_reference_wrapper<typename std::decay<_Tp2>::type>::__type = float; typename std::decay<_Tp2>::type = float; typename std::__strip_reference_wrapper<typename std::decay<_Tp>::type>::__type = float; typename std::decay<_Tp>::type = float]’:
src/classify.h:155:34:   required from ‘int torali::classifyRun(const TClassifyConfig&) [with TClassifyConfig = torali::ClassifyConfig]’
src/classify.h:484:21:   required from here
/usr/include/c++/11/bits/stl_pair.h:567:5: note: parameter passing for argument of type ‘std::pair<float, float>’ when C++17 is enabled changed to match C++14 in GCC 10.1
  567 |     make_pair(_T1&& __x, _T2&& __y)
      |     ^~~~~~~~~
In member function ‘void __gnu_cxx::new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = char; _Args = {}; _Tp = char]’,
    inlined from ‘typename std::enable_if<boost::detail::alloc_has_construct<void, A, T, Args ...>::value>::type boost::allocator_construct(A&, T*, Args&& ...) [with A = std::allocator<char>; T = char; Args = {}]’ at /usr/include/boost/core/allocator_access.hpp:432:16,
    inlined from ‘void boost::alloc_construct_n(A&, T*, std::size_t) [with A = std::allocator<char>; T = char]’ at /usr/include/boost/core/alloc_construct.hpp:122:35,
    inlined from ‘void boost::multi_array<T, NumDims, Allocator>::allocate_space() [with T = char; unsigned int NumDims = 2; Allocator = std::allocator<char>]’ at /usr/include/boost/multi_array.hpp:548:29,
    inlined from ‘boost::multi_array<T, NumDims, Allocator>::multi_array(const Allocator&) [with T = char; unsigned int NumDims = 2; Allocator = std::allocator<char>]’ at /usr/include/boost/multi_array.hpp:156:19:
cc1plus: warning: ‘void* __builtin_memset(void*, int, unsigned int)’ offset 0 is out of the bounds [0, 0] [-Warray-bounds]
In file included from /usr/include/c++/11/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const torali::CNV&}; _Tp = torali::CNV; _Alloc = std::allocator<torali::CNV>]’:
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<torali::CNV>::iterator’ changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/c++/11/bits/stl_vector.h: In function ‘void torali::parseVcfCNV(const TConfig&, bam_hdr_t*, std::vector<torali::CNV>&) [with TConfig = torali::CountDNAConfig]’:
/usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
 1198 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/11/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {torali::BpCNV}; _Tp = torali::BpCNV; _Alloc = std::allocator<torali::BpCNV>]’:
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<torali::BpCNV>::iterator’ changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {torali::CNV}; _Tp = torali::CNV; _Alloc = std::allocator<torali::CNV>]’:
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<torali::CNV>::iterator’ changed in GCC 7.1
/usr/include/c++/11/bits/vector.tcc: In function ‘void torali::mergeCNVs(const TConfig&, std::vector<torali::CNV>&, std::vector<torali::CNV>&) [with TConfig = torali::CountDNAConfig]’:
/usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
  121 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
 1198 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
 1198 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/11/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/c++/11/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]’:
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/functional:65,
                 from /usr/include/boost/container_hash/hash.hpp:20,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:20,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/c++/11/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<torali::SortCNVs<torali::CNV> >]’:
/usr/include/c++/11/bits/stl_algo.h:1799:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
 1799 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<torali::SortCNVs<torali::CNV> >]’:
/usr/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
 1819 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
In file included from /usr/include/c++/11/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/c++/11/bits/vector.tcc: In function ‘void torali::callCNVs(const TConfig&, const std::pair<unsigned int, unsigned int>&, const std::vector<short unsigned int>&, const std::vector<short unsigned int>&, const TGcBias&, const TCoverage&, const bam_hdr_t*, int32_t, std::vector<torali::CNV>&) [with TConfig = torali::CountDNAConfig; TGcBias = std::vector<torali::GcBias>; TCoverage = std::vector<short unsigned int>]’:
/usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::BpCNV*, std::vector<torali::BpCNV> >’ changed in GCC 7.1
  121 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::BpCNV*, std::vector<torali::BpCNV> >’ changed in GCC 7.1
  121 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::BpCNV*, std::vector<torali::BpCNV> >’ changed in GCC 7.1
  121 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
  121 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/bits/stl_algo.h:61,
                 from /usr/include/c++/11/functional:65,
                 from /usr/include/boost/container_hash/hash.hpp:20,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:20,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/c++/11/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >; _Distance = int; _Tp = torali::CNV; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<torali::SortCNVs<torali::CNV> >]’:
/usr/include/c++/11/bits/stl_heap.h:223:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
  223 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/11/functional:65,
                 from /usr/include/boost/container_hash/hash.hpp:20,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:20,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/c++/11/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<torali::SortCNVs<torali::CNV> >]’:
/usr/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
 1925 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
/usr/include/c++/11/bits/stl_algo.h:1939:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
 1939 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/c++/11/bits/vector.tcc: In function ‘void torali::vcfOutput(const TConfig&, const std::vector<Property>&, const TJunctionCountMap&, const TReadCountMap&, const TCountMap&) [with TConfig = torali::Config; TStructuralVariantRecord = torali::StructuralVariantRecord; TJunctionCountMap = std::vector<std::vector<torali::JunctionCount> >; TReadCountMap = std::vector<std::vector<torali::ReadCount> >; TCountMap = std::vector<std::vector<torali::SpanningCount> >]’:
/usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
  121 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/vector.tcc: In function ‘void torali::vcfOutput(const TConfig&, const std::vector<Property>&, const TJunctionCountMap&, const TReadCountMap&, const TCountMap&) [with TConfig = torali::TeguaConfig; TStructuralVariantRecord = torali::StructuralVariantRecord; TJunctionCountMap = std::vector<std::vector<torali::JunctionCount> >; TReadCountMap = std::vector<std::vector<torali::ReadCount> >; TCountMap = std::vector<std::vector<torali::SpanningCount> >]’:
/usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
  121 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/functional:65,
                 from /usr/include/boost/container_hash/hash.hpp:20,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:20,
                 from src/delly.h:8,
                 from src/delly.cpp:17:
/usr/include/c++/11/bits/stl_algo.h: In function ‘int32_t torali::bamCount(const TConfig&, const torali::LibraryInfo&, const std::vector<torali::GcBias>&, const std::pair<unsigned int, unsigned int>&) [with TConfig = torali::CountDNAConfig]’:
/usr/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
 1954 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1955 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1956 |                                 __comp);
      |                                 ~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1866:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
 1866 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1871:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<torali::CNV*, std::vector<torali::CNV> >’ changed in GCC 7.1
 1871 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
chrpath -d src/dpe src/delly
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_auto_test -a
   create-stamp debian/debhelper-build-stamp
   dh_prep -a
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# avoiding redundant compile of delly
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_install -a
   dh_installdocs -a
   dh_installchangelogs -a
   dh_installman -a
   dh_perl -a
   dh_link -a
   dh_strip_nondeterminism -a
   dh_compress -a
   dh_fixperms -a
   dh_missing -a
   dh_dwz -a
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
dpkg-shlibdeps: warning: debian/delly/usr/bin/dpe contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/delly/usr/bin/delly contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/delly/usr/bin/dpe debian/delly/usr/bin/delly were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
   dh_installdeb -a
   dh_gencontrol -a
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package 'delly-dbgsym' in '../delly-dbgsym_0.9.1-1_armhf.deb'.
dpkg-deb: building package 'delly' in '../delly_0.9.1-1_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian pi4 based autobuilder <root@raspbian.org> >../delly_0.9.1-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2022-01-22T06:53:29Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


delly_0.9.1-1_armhf.changes:
----------------------------

Format: 1.8
Date: Sun, 16 Jan 2022 16:32:18 +0100
Source: delly
Binary: delly delly-dbgsym
Architecture: armhf
Version: 0.9.1-1
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian pi4 based autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 delly      - Structural variant discovery by read analysis
Changes:
 delly (0.9.1-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream version
   * Standards-Version: 4.6.0 (routine-update)
   * Add missing build dependency on dh addon.
   * Avoid explicitly specifying -Wl,--as-needed linker flag.
   * No need to repack source any more
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Files:
 07ab290d271a96394a834d80237ecf8d 4791648 debug optional delly-dbgsym_0.9.1-1_armhf.deb
 39e9a7446feead84ec6c32204bf73b7b 6453 science optional delly_0.9.1-1_armhf.buildinfo
 de9cda845391f7dea63b2fd7c16f6541 247784 science optional delly_0.9.1-1_armhf.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: delly
Binary: delly delly-dbgsym
Architecture: armhf
Version: 0.9.1-1
Checksums-Md5:
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Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Sat, 22 Jan 2022 06:53:28 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
 autoconf (= 2.71-2),
 automake (= 1:1.16.5-1.1),
 autopoint (= 0.21-4),
 autotools-dev (= 20180224.1+nmu1),
 base-files (= 12+rpi1),
 base-passwd (= 3.5.52),
 bash (= 5.1-5),
 binutils (= 2.37-7+rpi1),
 binutils-arm-linux-gnueabihf (= 2.37-7+rpi1),
 binutils-common (= 2.37-7+rpi1),
 bsdextrautils (= 2.37.2-6),
 bsdutils (= 1:2.37.2-4),
 build-essential (= 12.9),
 bzip2 (= 1.0.8-5),
 chrpath (= 0.16-2),
 coreutils (= 8.32-4.1),
 cpp (= 4:11.2.0-2+rpi1),
 cpp-11 (= 11.2.0-10+rpi1),
 dash (= 0.5.11+git20210903+057cd650a4ed-3),
 debconf (= 1.5.79),
 debhelper (= 13.6),
 debianutils (= 4.11.2),
 dh-autoreconf (= 20),
 dh-strip-nondeterminism (= 1.13.0-1),
 diffutils (= 1:3.7-5),
 dpkg (= 1.20.9+rpi1),
 dpkg-dev (= 1.20.9+rpi1),
 dwz (= 0.14-1),
 file (= 1:5.41-2),
 findutils (= 4.8.0-1),
 g++ (= 4:11.2.0-2+rpi1),
 g++-11 (= 11.2.0-10+rpi1),
 gcc (= 4:11.2.0-2+rpi1),
 gcc-11 (= 11.2.0-10+rpi1),
 gcc-11-base (= 11.2.0-10+rpi1),
 gettext (= 0.21-4),
 gettext-base (= 0.21-4),
 grep (= 3.7-1),
 groff-base (= 1.22.4-8),
 gzip (= 1.10-4),
 hostname (= 3.23),
 icu-devtools (= 67.1-7),
 init-system-helpers (= 1.60),
 intltool-debian (= 0.35.0+20060710.5),
 libacl1 (= 2.3.1-1),
 libarchive-zip-perl (= 1.68-1),
 libasan6 (= 11.2.0-10+rpi1),
 libatomic1 (= 11.2.0-10+rpi1),
 libattr1 (= 1:2.5.1-1),
 libaudit-common (= 1:3.0.6-1),
 libaudit1 (= 1:3.0.6-1),
 libbinutils (= 2.37-7+rpi1),
 libblkid1 (= 2.37.2-4),
 libboost-date-time-dev (= 1.74.0.3+b2),
 libboost-date-time1.74-dev (= 1.74.0-14),
 libboost-date-time1.74.0 (= 1.74.0-14),
 libboost-filesystem-dev (= 1.74.0.3+b2),
 libboost-filesystem1.74-dev (= 1.74.0-14),
 libboost-filesystem1.74.0 (= 1.74.0-14),
 libboost-iostreams-dev (= 1.74.0.3+b2),
 libboost-iostreams1.74-dev (= 1.74.0-14),
 libboost-iostreams1.74.0 (= 1.74.0-14),
 libboost-program-options-dev (= 1.74.0.3+b2),
 libboost-program-options1.74-dev (= 1.74.0-14),
 libboost-program-options1.74.0 (= 1.74.0-14),
 libboost-regex1.74-dev (= 1.74.0-14),
 libboost-regex1.74.0 (= 1.74.0-14),
 libboost-serialization1.74-dev (= 1.74.0-14),
 libboost-serialization1.74.0 (= 1.74.0-14),
 libboost-system-dev (= 1.74.0.3+b2),
 libboost-system1.74-dev (= 1.74.0-14),
 libboost-system1.74.0 (= 1.74.0-14),
 libboost1.74-dev (= 1.74.0-14),
 libbrotli1 (= 1.0.9-2+b1),
 libbz2-1.0 (= 1.0.8-5),
 libbz2-dev (= 1.0.8-5),
 libc-bin (= 2.32-4+rpi1),
 libc-dev-bin (= 2.32-4+rpi1),
 libc6 (= 2.32-4+rpi1),
 libc6-dev (= 2.32-4+rpi1),
 libcap-ng0 (= 0.7.9-2.2+b1),
 libcap2 (= 1:2.44-1),
 libcc1-0 (= 11.2.0-10+rpi1),
 libcom-err2 (= 1.46.4-1),
 libcrypt-dev (= 1:4.4.26-1),
 libcrypt1 (= 1:4.4.26-1),
 libctf-nobfd0 (= 2.37-7+rpi1),
 libctf0 (= 2.37-7+rpi1),
 libcurl3-gnutls (= 7.81.0-1),
 libcurl4-gnutls-dev (= 7.81.0-1),
 libdb5.3 (= 5.3.28+dfsg1-0.8),
 libdebconfclient0 (= 0.261),
 libdebhelper-perl (= 13.6),
 libdeflate-dev (= 1.8-1),
 libdeflate0 (= 1.8-1),
 libdpkg-perl (= 1.20.9+rpi1),
 libelf1 (= 0.186-1),
 libffi8 (= 3.4.2-3),
 libfile-stripnondeterminism-perl (= 1.13.0-1),
 libgcc-11-dev (= 11.2.0-10+rpi1),
 libgcc-s1 (= 11.2.0-10+rpi1),
 libgcrypt20 (= 1.9.4-3),
 libgdbm-compat4 (= 1.22-1),
 libgdbm6 (= 1.22-1),
 libgmp10 (= 2:6.2.1+dfsg-3),
 libgnutls30 (= 3.7.2-2),
 libgomp1 (= 11.2.0-10+rpi1),
 libgpg-error0 (= 1.42-3),
 libgssapi-krb5-2 (= 1.18.3-7),
 libhogweed6 (= 3.7.3-1),
 libhts-dev (= 1.13+ds-2),
 libhts3 (= 1.13+ds-2),
 libhtscodecs2 (= 1.1.1-3),
 libicu-dev (= 67.1-7),
 libicu67 (= 67.1-7),
 libidn2-0 (= 2.3.2-2),
 libisl23 (= 0.24-2),
 libk5crypto3 (= 1.18.3-7),
 libkeyutils1 (= 1.6.1-2),
 libkrb5-3 (= 1.18.3-7),
 libkrb5support0 (= 1.18.3-7),
 libldap-2.4-2 (= 2.4.59+dfsg-1),
 liblz4-1 (= 1.9.3-2),
 liblzma-dev (= 5.2.5-2),
 liblzma5 (= 5.2.5-2),
 libmagic-mgc (= 1:5.41-2),
 libmagic1 (= 1:5.41-2),
 libmount1 (= 2.37.2-4),
 libmpc3 (= 1.2.1-1),
 libmpfr6 (= 4.1.0-3),
 libnettle8 (= 3.7.3-1),
 libnghttp2-14 (= 1.43.0-1),
 libnsl-dev (= 1.3.0-2),
 libnsl2 (= 1.3.0-2),
 libp11-kit0 (= 0.24.0-5),
 libpam-modules (= 1.4.0-10),
 libpam-modules-bin (= 1.4.0-10),
 libpam-runtime (= 1.4.0-10),
 libpam0g (= 1.4.0-10),
 libpcre2-8-0 (= 10.39-3),
 libpcre3 (= 2:8.39-13),
 libperl5.32 (= 5.32.1-6),
 libpipeline1 (= 1.5.5-1),
 libpsl5 (= 0.21.0-1.2),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2),
 libsasl2-2 (= 2.1.27+dfsg2-2),
 libsasl2-modules-db (= 2.1.27+dfsg2-2),
 libseccomp2 (= 2.5.3-2+rpi1),
 libselinux1 (= 3.3-1),
 libsigsegv2 (= 2.13-1),
 libsmartcols1 (= 2.37.2-4),
 libssh2-1 (= 1.10.0-2),
 libssl1.1 (= 1.1.1l-1),
 libstdc++-11-dev (= 11.2.0-10+rpi1),
 libstdc++6 (= 11.2.0-10+rpi1),
 libsub-override-perl (= 0.09-2),
 libsystemd0 (= 249.7-1+rpi1),
 libtasn1-6 (= 4.18.0-4),
 libtinfo6 (= 6.3-1),
 libtirpc-common (= 1.3.2-2),
 libtirpc-dev (= 1.3.2-2),
 libtirpc3 (= 1.3.2-2),
 libtool (= 2.4.6-15),
 libubsan1 (= 11.2.0-10+rpi1),
 libuchardet0 (= 0.0.7-1),
 libudev1 (= 249.7-1+rpi1),
 libunistring2 (= 0.9.10-6),
 libuuid1 (= 2.37.2-4),
 libxml2 (= 2.9.12+dfsg-5),
 libzstd1 (= 1.4.8+dfsg-3+rpi1),
 linux-libc-dev (= 5.14.16-1+rpi1),
 login (= 1:4.8.1-2),
 lsb-base (= 11.1.0+rpi1),
 m4 (= 1.4.18-5),
 make (= 4.3-4.1),
 man-db (= 2.9.4-4),
 mawk (= 1.3.4.20200120-2),
 ncurses-base (= 6.3-1),
 ncurses-bin (= 6.3-1),
 patch (= 2.7.6-7),
 perl (= 5.32.1-6),
 perl-base (= 5.32.1-6),
 perl-modules-5.32 (= 5.32.1-6),
 po-debconf (= 1.0.21+nmu1),
 rpcsvc-proto (= 1.4.2-4),
 sed (= 4.8-1),
 sensible-utils (= 0.0.17),
 sysvinit-utils (= 3.00-1),
 tar (= 1.34+dfsg-1),
 util-linux (= 2.37.2-4),
 xz-utils (= 5.2.5-2),
 zlib1g (= 1:1.2.11.dfsg-2),
 zlib1g-dev (= 1:1.2.11.dfsg-2)
Environment:
 DEB_BUILD_OPTIONS="parallel=4"
 LANG="en_GB.UTF-8"
 LC_ALL="C.UTF-8"
 SOURCE_DATE_EPOCH="1642347138"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


delly-dbgsym_0.9.1-1_armhf.deb
------------------------------

 new Debian package, version 2.0.
 size 4791648 bytes: control archive=636 bytes.
     404 bytes,    12 lines      control              
     297 bytes,     3 lines      md5sums              
 Package: delly-dbgsym
 Source: delly
 Version: 0.9.1-1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 4923
 Depends: delly (= 0.9.1-1)
 Section: debug
 Priority: optional
 Description: debug symbols for delly
 Build-Ids: 33fa806693cbdcb4a0a97116474bdae165e982f2 be9ae34db2be7e4bc511650e3b420ec3513c9ad2

drwxr-xr-x root/root         0 2022-01-16 15:32 ./
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/lib/
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/lib/debug/
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/lib/debug/.build-id/33/
-rw-r--r-- root/root    646860 2022-01-16 15:32 ./usr/lib/debug/.build-id/33/fa806693cbdcb4a0a97116474bdae165e982f2.debug
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/lib/debug/.build-id/be/
-rw-r--r-- root/root   4265348 2022-01-16 15:32 ./usr/lib/debug/.build-id/be/9ae34db2be7e4bc511650e3b420ec3513c9ad2.debug
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/lib/debug/.dwz/
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/
-rw-r--r-- root/root    114020 2022-01-16 15:32 ./usr/lib/debug/.dwz/arm-linux-gnueabihf/delly.debug
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/share/
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/share/doc/
lrwxrwxrwx root/root         0 2022-01-16 15:32 ./usr/share/doc/delly-dbgsym -> delly


delly_0.9.1-1_armhf.deb
-----------------------

 new Debian package, version 2.0.
 size 247784 bytes: control archive=972 bytes.
     939 bytes,    16 lines      control              
     358 bytes,     6 lines      md5sums              
 Package: delly
 Version: 0.9.1-1
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 792
 Depends: libboost-filesystem1.74.0 (>= 1.74.0), libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.29), libgcc-s1 (>= 3.5), libgomp1 (>= 4.9), libhts3 (>= 1.10), libstdc++6 (>= 11)
 Section: science
 Priority: optional
 Homepage: https://github.com/dellytools/delly
 Description: Structural variant discovery by read analysis
  Delly performs Structural variant discovery by integrated paired-end and
  split-read analysis. It discovers, genotypes and visualizes deletions,
  tandem duplications, inversions and translocations at single-nucleotide
  resolution in short-read massively parallel sequencing data. It uses
  paired-ends, split-reads and read-depth to sensitively and accurately
  delineate genomic rearrangements throughout the genome.

drwxr-xr-x root/root         0 2022-01-16 15:32 ./
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/bin/
-rwxr-xr-x root/root    681620 2022-01-16 15:32 ./usr/bin/delly
-rwxr-xr-x root/root    112268 2022-01-16 15:32 ./usr/bin/dpe
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/share/
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/share/doc/
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/share/doc/delly/
-rw-r--r-- root/root      1155 2022-01-16 15:32 ./usr/share/doc/delly/changelog.Debian.gz
-rw-r--r-- root/root      2645 2022-01-16 15:32 ./usr/share/doc/delly/copyright
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/share/man/
drwxr-xr-x root/root         0 2022-01-16 15:32 ./usr/share/man/man1/
-rw-r--r-- root/root       291 2022-01-16 15:32 ./usr/share/man/man1/delly.1.gz
-rw-r--r-- root/root       336 2022-01-16 15:32 ./usr/share/man/man1/dpe.1.gz


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build Type: any
Build-Space: 29096
Build-Time: 227
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 386
Job: delly_0.9.1-1
Machine Architecture: armhf
Package: delly
Package-Time: 649
Source-Version: 0.9.1-1
Space: 29096
Status: successful
Version: 0.9.1-1
--------------------------------------------------------------------------------
Finished at 2022-01-22T06:53:29Z
Build needed 00:10:49, 29096k disk space