blasr →
0~20151014+git8e668be-1 →
armhf → 2015-12-21 19:58:18
sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on bm-wb-04
╔══════════════════════════════════════════════════════════════════════════════╗
║ blasr 0~20151014+git8e668be-1 (armhf) 21 Dec 2015 19:43 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: blasr
Version: 0~20151014+git8e668be-1
Source Version: 0~20151014+git8e668be-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/blasr-ur1ayp/blasr-0~20151014+git8e668be' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/blasr-ur1ayp' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-61385381-13f3-41ed-9a58-fea1e8a93524' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8552 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [10.6 MB]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files │
└──────────────────────────────────────────────────────────────────────────────┘
Check APT
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Building dependency tree...
Reading state information...
NOTICE: 'blasr' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debian-med/blasr.git
Please use:
git clone git://anonscm.debian.org/debian-med/blasr.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 151 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main blasr 0~20151014+git8e668be-1 (dsc) [2074 B]
Get:2 http://172.17.0.1/private stretch-staging/main blasr 0~20151014+git8e668be-1 (tar) [137 kB]
Get:3 http://172.17.0.1/private stretch-staging/main blasr 0~20151014+git8e668be-1 (diff) [12.1 kB]
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/«BUILDDIR»/resolver-qnzDmv/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-qnzDmv/apt_archive ./ InRelease
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Get:3 file:/«BUILDDIR»/resolver-qnzDmv/apt_archive ./ Release.gpg [299 B]
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Get:5 file:/«BUILDDIR»/resolver-qnzDmv/apt_archive ./ Packages [526 B]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libapt-pkg4.16 libisl13
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 9 not upgraded.
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debconf: delaying package configuration, since apt-utils is not installed
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Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), python, libhdf5-dev, zlib1g-dev, libblasr-dev, libpbdata-dev, libpbihdf-dev
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), python, libhdf5-dev, zlib1g-dev, libblasr-dev, libpbdata-dev, libpbihdf-dev
dpkg-deb: building package 'sbuild-build-depends-blasr-dummy' in '/«BUILDDIR»/resolver-qoZ6tB/apt_archive/sbuild-build-depends-blasr-dummy.deb'.
OK
Get:1 file:/«BUILDDIR»/resolver-qoZ6tB/apt_archive ./ InRelease
Ign:1 file:/«BUILDDIR»/resolver-qoZ6tB/apt_archive ./ InRelease
Get:2 file:/«BUILDDIR»/resolver-qoZ6tB/apt_archive ./ Release [2119 B]
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Get:3 file:/«BUILDDIR»/resolver-qoZ6tB/apt_archive ./ Release.gpg [299 B]
Get:3 file:/«BUILDDIR»/resolver-qoZ6tB/apt_archive ./ Release.gpg [299 B]
Get:4 file:/«BUILDDIR»/resolver-qoZ6tB/apt_archive ./ Sources [345 B]
Get:5 file:/«BUILDDIR»/resolver-qoZ6tB/apt_archive ./ Packages [602 B]
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install blasr build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libapt-pkg4.16 libisl13
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
bsdmainutils debhelper dh-strip-nondeterminism file gettext gettext-base
groff-base hdf5-helpers intltool-debian libarchive-zip-perl libblasr
libblasr-dev libcroco3 libexpat1 libffi6 libfile-stripnondeterminism-perl
libgfortran3 libglib2.0-0 libhdf5-10 libhdf5-cpp-11 libhdf5-dev libicu55
libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libmagic1 libpbdata
libpbdata-dev libpbihdf libpbihdf-dev libpipeline1 libpython-stdlib
libpython2.7-minimal libpython2.7-stdlib libsqlite3-0 libssl1.0.2
libunistring0 libxml2 man-db mime-support po-debconf python python-minimal
python2.7 python2.7-minimal zlib1g-dev
Suggested packages:
wamerican | wordlist whois vacation dh-make gettext-doc autopoint
libasprintf-dev libgettextpo-dev groff libhdf5-doc less www-browser
libmail-box-perl python-doc python-tk python2.7-doc binfmt-support
Recommended packages:
curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs
xml-core libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils debhelper dh-strip-nondeterminism file gettext gettext-base
groff-base hdf5-helpers intltool-debian libarchive-zip-perl libblasr
libblasr-dev libcroco3 libexpat1 libffi6 libfile-stripnondeterminism-perl
libgfortran3 libglib2.0-0 libhdf5-10 libhdf5-cpp-11 libhdf5-dev libicu55
libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libmagic1 libpbdata
libpbdata-dev libpbihdf libpbihdf-dev libpipeline1 libpython-stdlib
libpython2.7-minimal libpython2.7-stdlib libsqlite3-0 libssl1.0.2
libunistring0 libxml2 man-db mime-support po-debconf python python-minimal
python2.7 python2.7-minimal sbuild-build-depends-blasr-dummy zlib1g-dev
0 upgraded, 47 newly installed, 0 to remove and 9 not upgraded.
Need to get 31.4 MB/31.4 MB of archives.
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Get:1 file:/«BUILDDIR»/resolver-qoZ6tB/apt_archive ./ sbuild-build-depends-blasr-dummy 0.invalid.0 [844 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-4 [1084 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.6 [177 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-1 [23.9 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-minimal armhf 2.7.11-2 [380 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf python2.7-minimal armhf 2.7.11-2 [1081 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf python-minimal armhf 2.7.11-1 [40.0 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf mime-support all 3.59 [36.4 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf libexpat1 armhf 2.1.0-7 [59.8 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libffi6 armhf 3.2.1-4 [18.5 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf libsqlite3-0 armhf 3.9.2-1 [404 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libssl1.0.2 armhf 1.0.2e-1 [883 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf libpython2.7-stdlib armhf 2.7.11-2 [1836 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf python2.7 armhf 2.7.11-2 [266 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf libpython-stdlib armhf 2.7.11-1 [19.5 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf python armhf 2.7.11-1 [150 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.25-2 [250 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.25-2 [61.2 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.6-1 [119 kB]
Get:22 http://172.17.0.1/private stretch-staging/main armhf libicu55 armhf 55.1-6 [7379 kB]
Get:23 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.3+dfsg1-1 [800 kB]
Get:24 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.46.2-1 [2482 kB]
Get:25 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.9-1 [129 kB]
Get:26 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.6-1 [1393 kB]
Get:27 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:28 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.18 [248 kB]
Get:29 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.55-1 [97.4 kB]
Get:30 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.014-1 [10.6 kB]
Get:31 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.014-1 [7472 B]
Get:32 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20151126 [830 kB]
Get:33 http://172.17.0.1/private stretch-staging/main armhf hdf5-helpers armhf 1.8.16+docs-1 [35.0 kB]
Get:34 http://172.17.0.1/private stretch-staging/main armhf libpbdata armhf 0~20151014+gitbe5d1bf-2 [91.1 kB]
Get:35 http://172.17.0.1/private stretch-staging/main armhf libgfortran3 armhf 5.3.1-3+rpi1 [154 kB]
Get:36 http://172.17.0.1/private stretch-staging/main armhf libhdf5-10 armhf 1.8.16+docs-1 [977 kB]
Get:37 http://172.17.0.1/private stretch-staging/main armhf libhdf5-cpp-11 armhf 1.8.16+docs-1 [115 kB]
Get:38 http://172.17.0.1/private stretch-staging/main armhf libpbihdf armhf 0~20151014+gitbe5d1bf-2 [102 kB]
Get:39 http://172.17.0.1/private stretch-staging/main armhf libblasr armhf 0~20151014+gitbe5d1bf-2 [786 kB]
Get:40 http://172.17.0.1/private stretch-staging/main armhf libblasr-dev armhf 0~20151014+gitbe5d1bf-2 [1614 kB]
Get:41 http://172.17.0.1/private stretch-staging/main armhf zlib1g-dev armhf 1:1.2.8.dfsg-2+b1 [197 kB]
Get:42 http://172.17.0.1/private stretch-staging/main armhf libjpeg62-turbo armhf 1:1.4.1-2 [103 kB]
Get:43 http://172.17.0.1/private stretch-staging/main armhf libjpeg62-turbo-dev armhf 1:1.4.1-2 [415 kB]
Get:44 http://172.17.0.1/private stretch-staging/main armhf libjpeg-dev all 1:1.4.1-2 [51.9 kB]
Get:45 http://172.17.0.1/private stretch-staging/main armhf libhdf5-dev armhf 1.8.16+docs-1 [4912 kB]
Get:46 http://172.17.0.1/private stretch-staging/main armhf libpbdata-dev armhf 0~20151014+gitbe5d1bf-2 [151 kB]
Get:47 http://172.17.0.1/private stretch-staging/main armhf libpbihdf-dev armhf 0~20151014+gitbe5d1bf-2 [194 kB]
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Preparing to unpack .../libblasr_0~20151014+gitbe5d1bf-2_armhf.deb ...
Unpacking libblasr:armhf (0~20151014+gitbe5d1bf-2) ...
Selecting previously unselected package libblasr-dev:armhf.
Preparing to unpack .../libblasr-dev_0~20151014+gitbe5d1bf-2_armhf.deb ...
Unpacking libblasr-dev:armhf (0~20151014+gitbe5d1bf-2) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../zlib1g-dev_1%3a1.2.8.dfsg-2+b1_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.8.dfsg-2+b1) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../libjpeg62-turbo_1%3a1.4.1-2_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:1.4.1-2) ...
Selecting previously unselected package libjpeg62-turbo-dev:armhf.
Preparing to unpack .../libjpeg62-turbo-dev_1%3a1.4.1-2_armhf.deb ...
Unpacking libjpeg62-turbo-dev:armhf (1:1.4.1-2) ...
Selecting previously unselected package libjpeg-dev.
Preparing to unpack .../libjpeg-dev_1%3a1.4.1-2_all.deb ...
Unpacking libjpeg-dev (1:1.4.1-2) ...
Selecting previously unselected package libhdf5-dev.
Preparing to unpack .../libhdf5-dev_1.8.16+docs-1_armhf.deb ...
Unpacking libhdf5-dev (1.8.16+docs-1) ...
Selecting previously unselected package libpbdata-dev:armhf.
Preparing to unpack .../libpbdata-dev_0~20151014+gitbe5d1bf-2_armhf.deb ...
Unpacking libpbdata-dev:armhf (0~20151014+gitbe5d1bf-2) ...
Selecting previously unselected package libpbihdf-dev:armhf.
Preparing to unpack .../libpbihdf-dev_0~20151014+gitbe5d1bf-2_armhf.deb ...
Unpacking libpbihdf-dev:armhf (0~20151014+gitbe5d1bf-2) ...
Selecting previously unselected package sbuild-build-depends-blasr-dummy.
Preparing to unpack .../sbuild-build-depends-blasr-dummy.deb ...
Unpacking sbuild-build-depends-blasr-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.21-4) ...
Setting up groff-base (1.22.3-4) ...
Setting up bsdmainutils (9.0.6) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libpipeline1:armhf (1.4.1-1) ...
Setting up man-db (2.7.5-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up mime-support (3.59) ...
Setting up libexpat1:armhf (2.1.0-7) ...
Setting up libffi6:armhf (3.2.1-4) ...
Setting up libsqlite3-0:armhf (3.9.2-1) ...
Setting up libssl1.0.2:armhf (1.0.2e-1) ...
Setting up libpython2.7-stdlib:armhf (2.7.11-2) ...
Setting up python2.7 (2.7.11-2) ...
Setting up libpython-stdlib:armhf (2.7.11-1) ...
Setting up python (2.7.11-1) ...
Setting up libunistring0:armhf (0.9.3-5.2) ...
Setting up libmagic1:armhf (1:5.25-2) ...
Setting up file (1:5.25-2) ...
Setting up gettext-base (0.19.6-1) ...
Setting up libicu55:armhf (55.1-6) ...
Setting up libxml2:armhf (2.9.3+dfsg1-1) ...
Setting up libglib2.0-0:armhf (2.46.2-1) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.9-1) ...
Setting up gettext (0.19.6-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.18) ...
Setting up libarchive-zip-perl (1.55-1) ...
Setting up libfile-stripnondeterminism-perl (0.014-1) ...
Setting up hdf5-helpers (1.8.16+docs-1) ...
Setting up libpbdata:armhf (0~20151014+gitbe5d1bf-2) ...
Setting up libgfortran3:armhf (5.3.1-3+rpi1) ...
Setting up libhdf5-10:armhf (1.8.16+docs-1) ...
Setting up libhdf5-cpp-11:armhf (1.8.16+docs-1) ...
Setting up libpbihdf:armhf (0~20151014+gitbe5d1bf-2) ...
Setting up libblasr:armhf (0~20151014+gitbe5d1bf-2) ...
Setting up libblasr-dev:armhf (0~20151014+gitbe5d1bf-2) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-2+b1) ...
Setting up libjpeg62-turbo:armhf (1:1.4.1-2) ...
Setting up libjpeg62-turbo-dev:armhf (1:1.4.1-2) ...
Setting up libjpeg-dev (1:1.4.1-2) ...
Setting up libhdf5-dev (1.8.16+docs-1) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up libpbdata-dev:armhf (0~20151014+gitbe5d1bf-2) ...
Setting up libpbihdf-dev:armhf (0~20151014+gitbe5d1bf-2) ...
Setting up debhelper (9.20151126) ...
Setting up sbuild-build-depends-blasr-dummy (0.invalid.0) ...
Setting up dh-strip-nondeterminism (0.014-1) ...
Processing triggers for libc-bin (2.21-4) ...
W: No sandbox user '_apt' on the system, can not drop privileges
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.25.90.20151209-1 dpkg-dev_1.18.3 g++-5_5.3.1-3+rpi1 gcc-5_5.3.1-3+rpi1 libc6-dev_2.21-4 libstdc++-4.9-dev_4.9.3-5+b1 libstdc++-5-dev_5.3.1-3+rpi1 libstdc++6_5.3.1-3+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: acl_2.2.52-2 adduser_3.113+nmu3 apt_1.1.4 base-files_9.4+rpi1 base-passwd_3.5.38 bash_4.3-14 binutils_2.25.90.20151209-1 bsdmainutils_9.0.6 bsdutils_1:2.27.1-1 build-essential_11.7 bzip2_1.0.6-8 coreutils_8.23-4 cpio_2.11+dfsg-4.1 cpp_4:5.2.1-4+rpi3 cpp-5_5.3.1-3+rpi1 dash_0.5.7-4 debconf_1.5.58 debfoster_2.7-2 debhelper_9.20151126 debianutils_4.5.1 dh-strip-nondeterminism_0.014-1 diffutils_1:3.3-2 dmsetup_2:1.02.110-2 dpkg_1.18.3 dpkg-dev_1.18.3 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.4.2-10 g++_4:5.2.1-4+rpi3 g++-5_5.3.1-3+rpi1 gcc_4:5.2.1-4+rpi3 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-1+b1 gcc-4.9-base_4.9.3-5+b1 gcc-5_5.3.1-3+rpi1 gcc-5-base_5.3.1-3+rpi1 gettext_0.19.6-1 gettext-base_0.19.6-1 gnupg_1.4.19-6 gpgv_1.4.19-6 grep_2.22-1 groff-base_1.22.3-4 gzip_1.6-4 hdf5-helpers_1.8.16+docs-1 hostname_3.16 init_1.24 init-system-helpers_1.24 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-4+rpi1 kmod_21-1 libacl1_2.2.52-2 libapparmor1_2.10-2+b2 libapt-pkg4.12_1.0.9.10 libapt-pkg4.16_1.0.10.2 libapt-pkg5.0_1.1.4 libarchive-zip-perl_1.55-1 libasan1_4.9.3-5+b1 libasan2_5.3.1-3+rpi1 libatomic1_5.3.1-3+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.4-4 libaudit1_1:2.4.4-4 libblasr_0~20151014+gitbe5d1bf-2 libblasr-dev_0~20151014+gitbe5d1bf-2 libblkid1_2.27.1-1 libbz2-1.0_1.0.6-8 libc-bin_2.21-4 libc-dev-bin_2.21-4 libc6_2.21-4 libc6-dev_2.21-4 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.3.1-3+rpi1 libcomerr2_1.42.13-1 libcroco3_0.6.9-1 libcryptsetup4_2:1.6.6-5 libdb5.3_5.3.28-11 libdbus-1-3_1.10.6-1 libdebconfclient0_0.200 libdevmapper1.02.1_2:1.02.110-2 libdpkg-perl_1.18.3 libdrm2_2.4.65-3 libexpat1_2.1.0-7 libfakeroot_1.20.2-1 libfdisk1_2.27.1-1 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.014-1 libgc1c2_1:7.4.2-7.3 libgcc-4.9-dev_4.9.3-5+b1 libgcc-5-dev_5.3.1-3+rpi1 libgcc1_1:5.3.1-3+rpi1 libgcrypt20_1.6.4-3 libgdbm3_1.8.3-13.1 libgfortran3_5.3.1-3+rpi1 libglib2.0-0_2.46.2-1 libgmp10_2:6.1.0+dfsg-2 libgomp1_5.3.1-3+rpi1 libgpg-error0_1.20-1 libhdf5-10_1.8.16+docs-1 libhdf5-cpp-11_1.8.16+docs-1 libhdf5-dev_1.8.16+docs-1 libicu55_55.1-6 libisl13_0.14-2 libisl15_0.15-3 libjpeg-dev_1:1.4.1-2 libjpeg62-turbo_1:1.4.1-2 libjpeg62-turbo-dev_1:1.4.1-2 libklibc_2.0.4-4+rpi1 libkmod2_21-1 liblocale-gettext-perl_1.07-1 liblzma5_5.1.1alpha+20120614-2.1 libmagic1_1:5.25-2 libmount1_2.27.1-1 libmpc3_1.0.3-1 libmpfr4_3.1.3-1 libncurses5_6.0+20151024-2 libncursesw5_6.0+20151024-2 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpbdata_0~20151014+gitbe5d1bf-2 libpbdata-dev_0~20151014+gitbe5d1bf-2 libpbihdf_0~20151014+gitbe5d1bf-2 libpbihdf-dev_0~20151014+gitbe5d1bf-2 libpcre3_2:8.35-8 libpipeline1_1.4.1-1 libpng12-0_1.2.54-1 libprocps3_2:3.3.9-9 libprocps4_2:3.3.10-2 libpython-stdlib_2.7.11-1 libpython2.7-minimal_2.7.11-2 libpython2.7-stdlib_2.7.11-2 libreadline6_6.3-8+b3 libseccomp2_2.2.3-2 libselinux1_2.4-3 libsemanage-common_2.4-3 libsemanage1_2.4-3 libsepol1_2.4-2 libslang2_2.3.0-2+b1 libsmartcols1_2.27.1-1 libsqlite3-0_3.9.2-1 libss2_1.42.13-1 libssl1.0.2_1.0.2e-1 libstdc++-4.9-dev_4.9.3-5+b1 libstdc++-5-dev_5.3.1-3+rpi1 libstdc++6_5.3.1-3+rpi1 libsystemd0_228-2 libtext-charwidth-perl_0.04-7+b4 libtext-iconv-perl_1.7-5+b5 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20151024-2 libubsan0_5.3.1-3+rpi1 libudev1_228-2 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-27 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-1 libxml2_2.9.3+dfsg1-1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_4.1+Debian13+rpi1+nmu1 make_4.0-8.2 makedev_2.3.1-93 man-db_2.7.5-1 manpages_3.74-1 mawk_1.3.3-17 mime-support_3.59 mount_2.27.1-1 multiarch-support_2.21-4 nano_2.4.2-1 ncurses-base_6.0+20151024-2 ncurses-bin_6.0+20151024-2 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.20.2-6 perl-base_5.20.2-6 perl-modules_5.20.2-6 po-debconf_1.0.18 procps_2:3.3.10-2 python_2.7.11-1 python-minimal_2.7.11-1 python2.7_2.7.11-2 python2.7-minimal_2.7.11-2 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-blasr-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_228-2 systemd-sysv_228-2 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 tar_1.28-2.1 tzdata_2015g-1 udev_228-2 util-linux_2.27.1-1 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Tue Dec 15 04:15:56 2015 UTC using RSA key ID AFE826FB
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./blasr_0~20151014+git8e668be-1.dsc
dpkg-source: info: extracting blasr in blasr-0~20151014+git8e668be
dpkg-source: info: unpacking blasr_0~20151014+git8e668be.orig.tar.gz
dpkg-source: info: unpacking blasr_0~20151014+git8e668be-1.debian.tar.xz
Check disc space
────────────────
Sufficient free space for build
User Environment
────────────────
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-61385381-13f3-41ed-9a58-fea1e8a93524
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package blasr
dpkg-buildpackage: source version 0~20151014+git8e668be-1
dpkg-buildpackage: source distribution unstable
dpkg-source --before-build blasr-0~20151014+git8e668be
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh clean --parallel
dh_testdir -O--parallel
debian/rules override_dh_auto_clean
make[1]: Entering directory '/«BUILDDIR»/blasr-0~20151014+git8e668be'
./configure.py --no-pbbam --shared
`uname`
Linux
writing to '/«BUILDDIR»/blasr-0~20151014+git8e668be/defines.mk':
"""
LIBPBDATA_LIB ?= /usr/lib/arm-linux-gnueabihf/pbdata
LIBBLASR_LIBFLAGS ?= -lblasr
HDF5_LIB ?= /usr/lib/arm-linux-gnueabihf/hdf5/serial
DL_LIBFLAGS ?= -ldl
HDF5_INC ?= /usr/include/hdf5/serial
LIBPBDATA_INC ?= /usr/include/pbdata
LIBPBIHDF_LIBFLAGS ?= -lpbihdf
LIBPBIHDF_INC ?= /usr/include/pbihdf
LIBBLASR_LIB ?= /usr/lib/arm-linux-gnueabihf/blasr
SHELL ?= bash
BLASR_INC ?= /«BUILDDIR»/blasr-0~20151014+git8e668be/include
HDF5_LIBFLAGS ?= -lhdf5_cpp -lhdf5
LIBPBDATA_LIBFLAGS ?= -lpbdata
ZLIB_LIBFLAGS ?= -lz
RT_LIBFLAGS ?= -lrt
LIBBLASR_INC ?= /usr/include/blasr
PTHREAD_LIBFLAGS ?= -lpthread
LIBPBIHDF_LIB ?= /usr/lib/arm-linux-gnueabihf/pbihdf
"""
----
/usr/bin/make clean
make[2]: Entering directory '/«BUILDDIR»/blasr-0~20151014+git8e668be'
rm -f blasr Blasr.o Blasr.d blasr.d
/usr/bin/make -C utils clean
make[3]: Entering directory '/«BUILDDIR»/blasr-0~20151014+git8e668be/utils'
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
make[3]: Leaving directory '/«BUILDDIR»/blasr-0~20151014+git8e668be/utils'
/usr/bin/make -C extrautils clean
make[3]: Entering directory '/«BUILDDIR»/blasr-0~20151014+git8e668be/extrautils'
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
make[3]: Leaving directory '/«BUILDDIR»/blasr-0~20151014+git8e668be/extrautils'
make[2]: Leaving directory '/«BUILDDIR»/blasr-0~20151014+git8e668be'
# This is created by configure.py
rm -f defines.mk
make[1]: Leaving directory '/«BUILDDIR»/blasr-0~20151014+git8e668be'
dh_clean -O--parallel
debian/rules build-arch
dh build-arch --parallel
dh_testdir -a -O--parallel
debian/rules override_dh_auto_configure
make[1]: Entering directory '/«BUILDDIR»/blasr-0~20151014+git8e668be'
./configure.py --no-pbbam --shared
`uname`
Linux
writing to '/«BUILDDIR»/blasr-0~20151014+git8e668be/defines.mk':
"""
LIBPBDATA_LIB ?= /usr/lib/arm-linux-gnueabihf/pbdata
LIBBLASR_LIBFLAGS ?= -lblasr
HDF5_LIB ?= /usr/lib/arm-linux-gnueabihf/hdf5/serial
DL_LIBFLAGS ?= -ldl
HDF5_INC ?= /usr/include/hdf5/serial
LIBPBDATA_INC ?= /usr/include/pbdata
LIBPBIHDF_LIBFLAGS ?= -lpbihdf
LIBPBIHDF_INC ?= /usr/include/pbihdf
LIBBLASR_LIB ?= /usr/lib/arm-linux-gnueabihf/blasr
SHELL ?= bash
BLASR_INC ?= /«BUILDDIR»/blasr-0~20151014+git8e668be/include
HDF5_LIBFLAGS ?= -lhdf5_cpp -lhdf5
LIBPBDATA_LIBFLAGS ?= -lpbdata
ZLIB_LIBFLAGS ?= -lz
RT_LIBFLAGS ?= -lrt
LIBBLASR_INC ?= /usr/include/blasr
PTHREAD_LIBFLAGS ?= -lpthread
LIBPBIHDF_LIB ?= /usr/lib/arm-linux-gnueabihf/pbihdf
"""
----
make[1]: Leaving directory '/«BUILDDIR»/blasr-0~20151014+git8e668be'
dh_auto_build -a -O--parallel
make -j4
make[1]: Entering directory '/«BUILDDIR»/blasr-0~20151014+git8e668be'
g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -c -o Blasr.o Blasr.cpp
make -C utils
make[2]: Entering directory '/«BUILDDIR»/blasr-0~20151014+git8e668be/utils'
g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -c -o LoadPulses.o LoadPulses.cpp
g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -c -o PulseToFasta.o PulseToFasta.cpp
g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -c -o SamToCmpH5.o SamToCmpH5.cpp
g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -c -o SamToM4.o SamToM4.cpp
g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -c -o SamFilter.o SamFilter.cpp
g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -c -o ToAfg.o ToAfg.cpp
g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -c -o SAWriter.o SAWriter.cpp
g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -c -o SDPMatcher.o SDPMatcher.cpp
g++ -o pls2fasta PulseToFasta.o -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -MF"pls2fasta.d" -Wl,-z,relro -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lpbihdf -lblasr -lpbdata -lpbihdf -lhdf5_cpp -lhdf5 -lz -lrt -lpthread -ldl
g++ -o samtoh5 SamToCmpH5.o -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -MF"samtoh5.d" -Wl,-z,relro -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lpbihdf -lblasr -lpbdata -lpbihdf -lhdf5_cpp -lhdf5 -lz -lrt -lpthread -ldl
g++ -o samtom4 SamToM4.o -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -MF"samtom4.d" -Wl,-z,relro -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lpbihdf -lblasr -lpbdata -lpbihdf -lhdf5_cpp -lhdf5 -lz -lrt -lpthread -ldl
g++ -o samFilter SamFilter.o -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -MF"samFilter.d" -Wl,-z,relro -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lpbihdf -lblasr -lpbdata -lpbihdf -lhdf5_cpp -lhdf5 -lz -lrt -lpthread -ldl
g++ -o toAfg ToAfg.o -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -MF"toAfg.d" -Wl,-z,relro -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lpbihdf -lblasr -lpbdata -lpbihdf -lhdf5_cpp -lhdf5 -lz -lrt -lpthread -ldl
g++ -o sawriter SAWriter.o -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -MF"sawriter.d" -Wl,-z,relro -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lpbihdf -lblasr -lpbdata -lpbihdf -lhdf5_cpp -lhdf5 -lz -lrt -lpthread -ldl
g++ -o loadPulses LoadPulses.o -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -MF"loadPulses.d" -Wl,-z,relro -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lpbihdf -lblasr -lpbdata -lpbihdf -lhdf5_cpp -lhdf5 -lz -lrt -lpthread -ldl
g++ -o sdpMatcher SDPMatcher.o -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -MF"sdpMatcher.d" -Wl,-z,relro -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lpbihdf -lblasr -lpbdata -lpbihdf -lhdf5_cpp -lhdf5 -lz -lrt -lpthread -ldl
make[2]: Leaving directory '/«BUILDDIR»/blasr-0~20151014+git8e668be/utils'
g++ -o blasr -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -O3 -g -std=c++0x -pedantic -Wall -Wuninitialized -Wno-div-by-zero -MMD -MP -w -fpermissive -fno-builtin-malloc -fno-builtin-calloc -fno-builtin-realloc -fno-builtin-free -fno-omit-frame-pointer -I/«BUILDDIR»/blasr-0~20151014+git8e668be//include -D_FORTIFY_SOURCE=2 -I/«BUILDDIR»/blasr-0~20151014+git8e668be/include -I/usr/include/blasr -I/usr/include/pbdata -I/usr/include/pbihdf -I/usr/include/hdf5/serial -MF"blasr.d" Blasr.o -Wl,-z,relro -L/usr/lib/arm-linux-gnueabihf/blasr -L/usr/lib/arm-linux-gnueabihf/pbdata -L/usr/lib/arm-linux-gnueabihf/pbihdf -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lpbihdf -lblasr -lpbdata -lpbihdf -lhdf5_cpp -lhdf5 -lz -lrt -lpthread -ldl
LD_LIBRARY_PATH=/usr/lib/arm-linux-gnueabihf/hdf5/serial:/usr/lib/arm-linux-gnueabihf/blasr:/usr/lib/arm-linux-gnueabihf/pbihdf:/usr/lib/arm-linux-gnueabihf/pbdata:
make[1]: Leaving directory '/«BUILDDIR»/blasr-0~20151014+git8e668be'
fakeroot debian/rules binary-arch
dh binary-arch --parallel
dh_testroot -a -O--parallel
dh_prep -a -O--parallel
dh_auto_install -a -O--parallel
dh_install -a -O--parallel
dh_installdocs -a -O--parallel
dh_installchangelogs -a -O--parallel
dh_installman -a -O--parallel
dh_lintian -a -O--parallel
dh_perl -a -O--parallel
dh_link -a -O--parallel
dh_strip_nondeterminism -a -O--parallel
dh_compress -a -O--parallel
dh_fixperms -a -O--parallel
dh_strip -a -O--parallel
dh_makeshlibs -a -O--parallel
dh_shlibdeps -a -O--parallel
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: debian/blasr/usr/bin/samtoh5 contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: debian/blasr/usr/bin/blasr contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: debian/blasr/usr/bin/samFilter contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: debian/blasr/usr/bin/pls2fasta contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: debian/blasr/usr/bin/sdpMatcher contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: debian/blasr/usr/bin/sawriter contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: debian/blasr/usr/bin/samtom4 contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: debian/blasr/usr/bin/loadPulses contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libblasr.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbihdf.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: can't extract name and version from library name 'libpbdata.so'
dpkg-shlibdeps: warning: debian/blasr/usr/bin/toAfg contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blasr/usr/bin/samtoh5 debian/blasr/usr/bin/blasr debian/blasr/usr/bin/samFilter debian/blasr/usr/bin/pls2fasta debian/blasr/usr/bin/sdpMatcher debian/blasr/usr/bin/sawriter debian/blasr/usr/bin/samtom4 debian/blasr/usr/bin/loadPulses debian/blasr/usr/bin/toAfg were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blasr/usr/bin/samtoh5 debian/blasr/usr/bin/blasr debian/blasr/usr/bin/samFilter debian/blasr/usr/bin/pls2fasta debian/blasr/usr/bin/sdpMatcher debian/blasr/usr/bin/sawriter debian/blasr/usr/bin/samtom4 debian/blasr/usr/bin/loadPulses debian/blasr/usr/bin/toAfg were not linked against libdl.so.2 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blasr/usr/bin/samtoh5 debian/blasr/usr/bin/blasr debian/blasr/usr/bin/samFilter debian/blasr/usr/bin/pls2fasta debian/blasr/usr/bin/sdpMatcher debian/blasr/usr/bin/sawriter debian/blasr/usr/bin/samtom4 debian/blasr/usr/bin/loadPulses debian/blasr/usr/bin/toAfg were not linked against librt.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blasr/usr/bin/samtoh5 debian/blasr/usr/bin/blasr debian/blasr/usr/bin/samFilter debian/blasr/usr/bin/pls2fasta debian/blasr/usr/bin/sdpMatcher debian/blasr/usr/bin/sawriter debian/blasr/usr/bin/samtom4 debian/blasr/usr/bin/loadPulses debian/blasr/usr/bin/toAfg were not linked against libz.so.1 (they use none of the library's symbols)
dh_installdeb -a -O--parallel
dh_gencontrol -a -O--parallel
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a -O--parallel
dh_builddeb -a -O--parallel
dpkg-deb: building package 'blasr' in '../blasr_0~20151014+git8e668be-1_armhf.deb'.
dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../blasr_0~20151014+git8e668be-1_armhf.changes
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build blasr-0~20151014+git8e668be
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20151221-1956
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build Chroot │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
blasr_0~20151014+git8e668be-1_armhf.changes:
────────────────────────────────────────────
Format: 1.8
Date: Mon, 14 Dec 2015 19:51:57 -0800
Source: blasr
Binary: blasr
Architecture: armhf
Version: 0~20151014+git8e668be-1
Distribution: stretch-staging
Urgency: high
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Afif Elghraoui <afif@ghraoui.name>
Description:
blasr - mapping single-molecule sequencing reads
Closes: 807985
Changes:
blasr (0~20151014+git8e668be-1) unstable; urgency=high
.
* Don't install LICENSES.txt file
* Imported Upstream version 0~20151014+git8e668be
* Use externally packaged pbseqlib and dynamically link to it
(Closes: #807985)
* Adjust for renamed upstream documentation
* Minor clean-ups
* Update comment about why tests can't be run
* Allow building in parallel
Checksums-Sha1:
f77c856cb7c3f9129840d0d97186e694aecfadf3 377752 blasr_0~20151014+git8e668be-1_armhf.deb
Checksums-Sha256:
868012ca88cb56532c4f1b2cd54e266a8ff69a0a6cbad0cbd6113158def3138b 377752 blasr_0~20151014+git8e668be-1_armhf.deb
Files:
cd008b911039c7d1ef70e7f9e184d454 377752 science optional blasr_0~20151014+git8e668be-1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
blasr_0~20151014+git8e668be-1_armhf.deb
───────────────────────────────────────
new debian package, version 2.0.
size 377752 bytes: control archive=1339 bytes.
755 bytes, 14 lines control
1465 bytes, 24 lines md5sums
Package: blasr
Version: 0~20151014+git8e668be-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 1341
Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), libhdf5-10, libhdf5-cpp-11 (>= 1.8.16), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4), libblasr, libpbdata, libpbihdf
Section: science
Priority: optional
Homepage: https://github.com/PacificBiosciences/blasr
Description: mapping single-molecule sequencing reads
Basic local alignment with successive refinement (BLASR) is a method
for mapping single-molecule sequencing reads against a reference genome.
Such reads are thousands of bases long, with divergence between them
and the genome being dominated by insertion and deletion error.
drwxr-xr-x root/root 0 2015-12-21 19:56 ./
drwxr-xr-x root/root 0 2015-12-21 19:56 ./usr/
drwxr-xr-x root/root 0 2015-12-21 19:56 ./usr/bin/
-rwxr-xr-x root/root 474120 2015-12-21 19:56 ./usr/bin/blasr
-rwxr-xr-x root/root 285136 2015-12-21 19:56 ./usr/bin/loadPulses
-rwxr-xr-x root/root 104580 2015-12-21 19:56 ./usr/bin/pls2fasta
-rwxr-xr-x root/root 88048 2015-12-21 19:56 ./usr/bin/samFilter
-rwxr-xr-x root/root 129256 2015-12-21 19:56 ./usr/bin/samtoh5
-rwxr-xr-x root/root 55080 2015-12-21 19:56 ./usr/bin/samtom4
-rwxr-xr-x root/root 46784 2015-12-21 19:56 ./usr/bin/sawriter
-rwxr-xr-x root/root 71364 2015-12-21 19:56 ./usr/bin/sdpMatcher
-rwxr-xr-x root/root 79768 2015-12-21 19:56 ./usr/bin/toAfg
drwxr-xr-x root/root 0 2015-12-21 19:56 ./usr/share/
drwxr-xr-x root/root 0 2015-12-21 19:56 ./usr/share/doc/
drwxr-xr-x root/root 0 2015-12-21 19:56 ./usr/share/doc/blasr/
-rw-r--r-- root/root 1173 2015-10-14 07:00 ./usr/share/doc/blasr/README.MANUAL.md
-rw-r--r-- root/root 92 2015-10-14 07:00 ./usr/share/doc/blasr/README.md
-rw-r--r-- root/root 111 2015-07-31 04:46 ./usr/share/doc/blasr/TODO.Debian
-rw-r--r-- root/root 430 2015-12-15 03:52 ./usr/share/doc/blasr/changelog.Debian.gz
-rw-r--r-- root/root 2004 2015-12-13 20:42 ./usr/share/doc/blasr/copyright
drwxr-xr-x root/root 0 2015-12-21 19:56 ./usr/share/lintian/
drwxr-xr-x root/root 0 2015-12-21 19:56 ./usr/share/lintian/overrides/
-rw-r--r-- root/root 299 2015-12-15 03:51 ./usr/share/lintian/overrides/blasr
drwxr-xr-x root/root 0 2015-12-21 19:56 ./usr/share/man/
drwxr-xr-x root/root 0 2015-12-21 19:56 ./usr/share/man/man1/
-rw-r--r-- root/root 5732 2015-12-21 19:56 ./usr/share/man/man1/blasr.1.gz
-rw-r--r-- root/root 936 2015-12-21 19:56 ./usr/share/man/man1/loadPulses.1.gz
-rw-r--r-- root/root 925 2015-12-21 19:56 ./usr/share/man/man1/pls2fasta.1.gz
-rw-r--r-- root/root 1397 2015-12-21 19:56 ./usr/share/man/man1/samFilter.1.gz
-rw-r--r-- root/root 925 2015-12-21 19:56 ./usr/share/man/man1/samtoh5.1.gz
-rw-r--r-- root/root 401 2015-12-21 19:56 ./usr/share/man/man1/samtom4.1.gz
-rw-r--r-- root/root 841 2015-12-21 19:56 ./usr/share/man/man1/sawriter.1.gz
-rw-r--r-- root/root 440 2015-12-21 19:56 ./usr/share/man/man1/sdpMatcher.1.gz
-rw-r--r-- root/root 311 2015-12-21 19:56 ./usr/share/man/man1/toAfg.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 44104
Build-Time: 452
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 288
Job: blasr_0~20151014+git8e668be-1
Machine Architecture: armhf
Package: blasr
Package-Time: 785
Source-Version: 0~20151014+git8e668be-1
Space: 44104
Status: successful
Version: 0~20151014+git8e668be-1
────────────────────────────────────────────────────────────────────────────────
Finished at 20151221-1956
Build needed 00:13:05, 44104k disc space