Build log for beast-mcmc (1.10.4+dfsg-4) on armhf

beast-mcmc → 1.10.4+dfsg-4 → armhf → 2022-11-07 05:03:40

sbuild (Debian sbuild) 0.78.1 (09 February 2019) on test2019

+==============================================================================+
| beast-mcmc 1.10.4+dfsg-4 (armhf)             Mon, 07 Nov 2022 04:38:12 +0000 |
+==============================================================================+

Package: beast-mcmc
Version: 1.10.4+dfsg-4
Source Version: 1.10.4+dfsg-4
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
Build Type: any

I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bookworm-staging-armhf-sbuild-b7a11ba0-76e6-4023-af1e-6c6ee54741a5' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/beast-mcmc-WCRs9u/resolver-9MkZT4' with '<<RESOLVERDIR>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.4 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.2 MB]
Fetched 27.7 MB in 11s (2542 kB/s)
Reading package lists...
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'beast-mcmc' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/beast-mcmc.git
Please use:
git clone https://salsa.debian.org/med-team/beast-mcmc.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 5050 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main beast-mcmc 1.10.4+dfsg-4 (dsc) [2472 B]
Get:2 http://172.17.4.1/private bookworm-staging/main beast-mcmc 1.10.4+dfsg-4 (tar) [5022 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main beast-mcmc 1.10.4+dfsg-4 (diff) [25.3 kB]
Fetched 5050 kB in 1s (7215 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/beast-mcmc-WCRs9u/beast-mcmc-1.10.4+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/beast-mcmc-WCRs9u' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), javahelper, ant, ant-optional, default-jdk, libjebl2-java, libjam-java, figtree, liboptions-java, libhmsbeagle-java, libcolt-free-java, libmpj-java, r-cran-rjava, libcommons-math-java, libjdom1-java, junit4, libmtj-java, libitext1-java, libejml-java (>= 0.38), libjlapack-java, build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), javahelper, ant, ant-optional, default-jdk, libjebl2-java, libjam-java, figtree, liboptions-java, libhmsbeagle-java, libcolt-free-java, libmpj-java, r-cran-rjava, libcommons-math-java, libjdom1-java, junit4, libmtj-java, libitext1-java, libejml-java (>= 0.38), libjlapack-java, build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [957 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [495 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [575 B]
Fetched 2027 B in 0s (36.8 kB/s)
Reading package lists...
Reading package lists...

Install main build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libpam-cap libperl5.34 perl-modules-5.34
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  ant ant-optional autoconf automake autopoint autotools-dev bsdextrautils
  ca-certificates ca-certificates-java dctrl-tools debhelper default-jdk
  default-jdk-headless default-jre default-jre-headless devscripts
  dh-autoreconf dh-strip-nondeterminism dwz figtree file fontconfig
  fontconfig-config fonts-dejavu-core gettext gettext-base groff-base
  intltool-debian java-common java-wrappers javahelper junit4
  libactivation-java libapache-pom-java libarchive-zip-perl libasound2
  libasound2-data libavahi-client3 libavahi-common-data libavahi-common3
  libb-hooks-op-check-perl libbatik-java libblas3 libbrotli1 libbsd0 libcairo2
  libclang-common-14-dev libclang-cpp14 libclass-method-modifiers-perl
  libclass-xsaccessor-perl libclc-14 libclc-14-dev libcolt-free-java
  libcommons-cli-java libcommons-codec-java libcommons-io-java
  libcommons-logging-java libcommons-math-java libcommons-parent-java
  libconcurrent-java libcups2 libcurl4 libdatrie1 libdbus-1-3
  libdebhelper-perl libdeflate0 libdevel-callchecker-perl libdrm-amdgpu1
  libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2
  libdynaloader-functions-perl libedit2 libejml-java libelf1
  libencode-locale-perl libexpat1 libf2j-java libfile-dirlist-perl
  libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl
  libfile-touch-perl libfile-which-perl libfontconfig1 libfreetype6
  libfribidi0 libgfortran5 libgif7 libgl1 libgl1-mesa-dri libglapi-mesa
  libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libhamcrest-java
  libharfbuzz0b libhmsbeagle-java libhmsbeagle1v5 libhtml-parser-perl
  libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl
  libhttp-message-perl libhttp-negotiate-perl libice6 libicu71
  libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl
  libipc-run-perl libitext1-java libitext5-java libjam-java libjaxen-java
  libjaxp1.3-java libjbig0 libjdom1-java libjebl2-java libjlapack-java
  libjpeg62-turbo liblapack3 liblcms2-2 liblerc4 libllvm14 liblog4j1.2-java
  liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1
  libmd0 libmodule-runtime-perl libmoo-perl libmpdec3 libmpj-java libmtj-java
  libnet-http-perl libnet-ssleay-perl libnghttp2-14 libnspr4 libnss3
  liboptions-java libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
  libpaper-utils libpaper1 libparams-classify-perl libpcsclite1 libpipeline1
  libpixman-1-0 libpng16-16 libpsl5 libpython3-stdlib libpython3.10-minimal
  libpython3.10-stdlib libregexp-ipv6-perl librole-tiny-perl librtmp1
  libsensors-config libsensors5 libsm6 libssh2-1 libssl3 libsub-override-perl
  libsub-quote-perl libtcl8.6 libthai-data libthai0 libtiff5 libtimedate-perl
  libtinfo5 libtk8.6 libtool libtry-tiny-perl libuchardet0 liburi-perl
  libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1
  libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0
  libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6
  libxext6 libxfixes3 libxft2 libxi6 libxml-commons-external-java libxml2
  libxmlgraphics-commons-java libxrender1 libxshmfence1 libxss1 libxt6
  libxtst6 libxxf86vm1 libz3-4 m4 man-db media-types mesa-opencl-icd netbase
  ocl-icd-libopencl1 openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre
  openjdk-11-jre-headless openssl patchutils perl-openssl-defaults po-debconf
  python3 python3-minimal python3.10 python3.10-minimal r-base-core
  r-cran-rjava ucf unzip wdiff x11-common xdg-utils zip
Suggested packages:
  ant-doc antlr javacc junit jython libbcel-java libbsf-java
  libcommons-net-java libmail-java libjdepend-java libjsch-java liboro-java
  libregexp-java libxalan2-java libxml-commons-resolver1.1-java libxz-java
  autoconf-archive gnu-standards autoconf-doc debtags dh-make adequate at
  autopkgtest bls-standalone bsd-mailx | mailx check-all-the-things
  cvs-buildpackage diffoscope disorderfs dose-extra duck elpa-devscripts
  faketime gnuplot how-can-i-help libauthen-sasl-perl libdbd-pg-perl
  libfile-desktopentry-perl libnet-smtps-perl libterm-size-perl
  libyaml-syck-perl mmdebstrap mozilla-devscripts mutt piuparts
  postgresql-client pristine-lfs quilt ratt reprotest ssh-client
  svn-buildpackage w3m gettext-doc libasprintf-dev libgettextpo-dev groff
  libasound2-plugins alsa-utils librhino-java libcommons-io-java-doc
  libavalon-framework-java libcommons-logging-java-doc
  libexcalibur-logkit-java cups-common low-memory-monitor libdata-dump-perl
  libbcpkix-java libbcprov-java libxml-security-java libitext5-java-doc
  libdom4j-java libxom-java libjdom1-java-doc liblcms2-utils
  liblog4j1.2-java-doc libcrypt-ssleay-perl libscalar-number-perl pcscd
  lm-sensors tcl8.6 tk8.6 libtool-doc gfortran | fortran95-compiler gcj-jdk
  libsub-name-perl libbusiness-isbn-perl libauthen-ntlm-perl
  libxmlgraphics-commons-java-doc m4-doc apparmor less www-browser
  openjdk-11-demo openjdk-11-source visualvm libnss-mdns fonts-dejavu-extra
  fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei
  | fonts-wqy-zenhei fonts-indic libmail-box-perl python3-doc python3-tk
  python3-venv python3.10-venv python3.10-doc binfmt-support elpa-ess
  r-doc-info | r-doc-pdf r-mathlib r-base-html wdiff-doc
Recommended packages:
  dput | dupload libdistro-info-perl libgit-wrapper-perl libgitlab-api-v4-perl
  liblist-compare-perl libstring-shellquote-perl licensecheck lintian
  python3-apt python3-debian python3-magic python3-requests python3-unidiff
  python3-xdg strace wget | curl debian-keyring equivs libsoap-lite-perl
  pristine-tar curl | wget | lynx alsa-ucm-conf alsa-topology-conf dbus
  libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs
  libhtml-format-perl libclone-perl libnamespace-clean-perl publicsuffix
  libltdl-dev libdata-dump-perl libhtml-form-perl libhttp-daemon-perl
  libmailtools-perl libxt-dev libatk-wrapper-java-jni fonts-dejavu-extra
  libmail-sendmail-perl r-recommended r-base-dev r-doc-html
  libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
  x11-xserver-utils
The following NEW packages will be installed:
  ant ant-optional autoconf automake autopoint autotools-dev bsdextrautils
  ca-certificates ca-certificates-java dctrl-tools debhelper default-jdk
  default-jdk-headless default-jre default-jre-headless devscripts
  dh-autoreconf dh-strip-nondeterminism dwz figtree file fontconfig
  fontconfig-config fonts-dejavu-core gettext gettext-base groff-base
  intltool-debian java-common java-wrappers javahelper junit4
  libactivation-java libapache-pom-java libarchive-zip-perl libasound2
  libasound2-data libavahi-client3 libavahi-common-data libavahi-common3
  libb-hooks-op-check-perl libbatik-java libblas3 libbrotli1 libbsd0 libcairo2
  libclang-common-14-dev libclang-cpp14 libclass-method-modifiers-perl
  libclass-xsaccessor-perl libclc-14 libclc-14-dev libcolt-free-java
  libcommons-cli-java libcommons-codec-java libcommons-io-java
  libcommons-logging-java libcommons-math-java libcommons-parent-java
  libconcurrent-java libcups2 libcurl4 libdatrie1 libdbus-1-3
  libdebhelper-perl libdeflate0 libdevel-callchecker-perl libdrm-amdgpu1
  libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2
  libdynaloader-functions-perl libedit2 libejml-java libelf1
  libencode-locale-perl libexpat1 libf2j-java libfile-dirlist-perl
  libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl
  libfile-touch-perl libfile-which-perl libfontconfig1 libfreetype6
  libfribidi0 libgfortran5 libgif7 libgl1 libgl1-mesa-dri libglapi-mesa
  libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgraphite2-3 libhamcrest-java
  libharfbuzz0b libhmsbeagle-java libhmsbeagle1v5 libhtml-parser-perl
  libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl
  libhttp-message-perl libhttp-negotiate-perl libice6 libicu71
  libimport-into-perl libio-html-perl libio-pty-perl libio-socket-ssl-perl
  libipc-run-perl libitext1-java libitext5-java libjam-java libjaxen-java
  libjaxp1.3-java libjbig0 libjdom1-java libjebl2-java libjlapack-java
  libjpeg62-turbo liblapack3 liblcms2-2 liblerc4 libllvm14 liblog4j1.2-java
  liblwp-mediatypes-perl liblwp-protocol-https-perl libmagic-mgc libmagic1
  libmd0 libmodule-runtime-perl libmoo-perl libmpdec3 libmpj-java libmtj-java
  libnet-http-perl libnet-ssleay-perl libnghttp2-14 libnspr4 libnss3
  liboptions-java libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
  libpaper-utils libpaper1 libparams-classify-perl libpcsclite1 libpipeline1
  libpixman-1-0 libpng16-16 libpsl5 libpython3-stdlib libpython3.10-minimal
  libpython3.10-stdlib libregexp-ipv6-perl librole-tiny-perl librtmp1
  libsensors-config libsensors5 libsm6 libssh2-1 libsub-override-perl
  libsub-quote-perl libtcl8.6 libthai-data libthai0 libtiff5 libtimedate-perl
  libtinfo5 libtk8.6 libtool libtry-tiny-perl libuchardet0 liburi-perl
  libwebp7 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-xcb1
  libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0
  libxcb-render0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6
  libxext6 libxfixes3 libxft2 libxi6 libxml-commons-external-java libxml2
  libxmlgraphics-commons-java libxrender1 libxshmfence1 libxss1 libxt6
  libxtst6 libxxf86vm1 libz3-4 m4 man-db media-types mesa-opencl-icd netbase
  ocl-icd-libopencl1 openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre
  openjdk-11-jre-headless openssl patchutils perl-openssl-defaults po-debconf
  python3 python3-minimal python3.10 python3.10-minimal r-base-core
  r-cran-rjava sbuild-build-depends-main-dummy ucf unzip wdiff x11-common
  xdg-utils zip
The following packages will be upgraded:
  libssl3
1 upgraded, 239 newly installed, 0 to remove and 38 not upgraded.
Need to get 368 MB of archives.
After this operation, 933 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1000 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf libssl3 armhf 3.0.7-1 [1614 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.8-1 [768 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.8-1 [1476 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.10.6-1 [38.7 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf media-types all 8.0.0 [33.4 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.8-1 [1597 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf python3.10 armhf 3.10.8-1 [505 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.10.6-1 [21.7 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.10.6-1 [38.2 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-8 [793 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-1.1 [78.2 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.6-3 [34.3 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.0-1 [1299 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf netbase all 6.4 [12.8 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf openssl armhf 3.0.7-1 [1349 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates all 20211016 [156 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-4 [295 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-4 [120 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-4 [65.8 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-9 [171 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates-java all 20220719 [16.1 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf java-common all 0.72 [14.5 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf libavahi-common-data armhf 0.8-6+b1 [124 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf libavahi-common3 armhf 0.8-6+b1 [55.8 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf libdbus-1-3 armhf 1.14.4-1 [211 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf libavahi-client3 armhf 0.8-6+b1 [58.5 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf libcups2 armhf 2.4.2-1+b1 [311 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf liblcms2-2 armhf 2.13.1-1 [125 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf libjpeg62-turbo armhf 1:2.1.2-1 [144 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b2 [260 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf libpng16-16 armhf 1.6.38-2 [273 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf libfreetype6 armhf 2.12.1+dfsg-3 [352 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf fontconfig-config armhf 2.13.1-4.5 [281 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf libfontconfig1 armhf 2.13.1-4.5 [330 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf libnspr4 armhf 2:4.35-1 [90.9 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf libnss3 armhf 2:3.83-1 [1106 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf libasound2-data all 1.2.7.2-1 [39.1 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf libasound2 armhf 1.2.7.2-1 [322 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-0 armhf 2.74.1-1 [1214 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf libharfbuzz0b armhf 5.2.0-2 [1835 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf libpcsclite1 armhf 1.9.9-1 [58.1 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf openjdk-11-jre-headless armhf 11.0.16+8-1 [32.9 MB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf default-jre-headless armhf 2:1.11-72+b4 [11.2 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf ant all 1.10.12-3 [2124 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf ant-optional all 1.10.12-3 [454 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-1 [260 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-9 [510 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.10.1 [79.9 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-4 [526 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-1 [15.8 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14+20220924-2 [93.1 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf libicu71 armhf 71.1-3 [8855 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1 [591 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-9 [1220 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.10.1 [940 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf libglvnd0 armhf 1.5.0-1 [51.5 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf libmd0 armhf 1.0.4-2 [28.6 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf libbsd0 armhf 0.11.7-1 [112 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf libx11-data all 2:1.8.1-2 [308 kB]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf libx11-6 armhf 2:1.8.1-2 [704 kB]
Get:82 http://172.17.4.1/private bookworm-staging/main armhf libdrm-common all 2.4.113-2+rpi1 [15.8 kB]
Get:83 http://172.17.4.1/private bookworm-staging/main armhf libdrm2 armhf 2.4.113-2+rpi1 [41.6 kB]
Get:84 http://172.17.4.1/private bookworm-staging/main armhf libglapi-mesa armhf 22.2.0-1+rpi1 [84.6 kB]
Get:85 http://172.17.4.1/private bookworm-staging/main armhf libx11-xcb1 armhf 2:1.8.1-2 [203 kB]
Get:86 http://172.17.4.1/private bookworm-staging/main armhf libxcb-dri2-0 armhf 1.15-1 [107 kB]
Get:87 http://172.17.4.1/private bookworm-staging/main armhf libxcb-dri3-0 armhf 1.15-1 [107 kB]
Get:88 http://172.17.4.1/private bookworm-staging/main armhf libxcb-glx0 armhf 1.15-1 [121 kB]
Get:89 http://172.17.4.1/private bookworm-staging/main armhf libxcb-present0 armhf 1.15-1 [105 kB]
Get:90 http://172.17.4.1/private bookworm-staging/main armhf libxcb-shm0 armhf 1.15-1 [106 kB]
Get:91 http://172.17.4.1/private bookworm-staging/main armhf libxcb-sync1 armhf 1.15-1 [108 kB]
Get:92 http://172.17.4.1/private bookworm-staging/main armhf libxcb-xfixes0 armhf 1.15-1 [109 kB]
Get:93 http://172.17.4.1/private bookworm-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:94 http://172.17.4.1/private bookworm-staging/main armhf libxfixes3 armhf 1:6.0.0-2 [21.2 kB]
Get:95 http://172.17.4.1/private bookworm-staging/main armhf libxshmfence1 armhf 1.3-1 [8636 B]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.1 kB]
Get:97 http://172.17.4.1/private bookworm-staging/main armhf libdrm-amdgpu1 armhf 2.4.113-2+rpi1 [28.4 kB]
Get:98 http://172.17.4.1/private bookworm-staging/main armhf libdrm-nouveau2 armhf 2.4.113-2+rpi1 [26.0 kB]
Get:99 http://172.17.4.1/private bookworm-staging/main armhf libdrm-radeon1 armhf 2.4.113-2+rpi1 [29.7 kB]
Get:100 http://172.17.4.1/private bookworm-staging/main armhf libedit2 armhf 3.1-20221009-1 [76.0 kB]
Get:101 http://172.17.4.1/private bookworm-staging/main armhf libz3-4 armhf 4.8.12-1 [5758 kB]
Get:102 http://172.17.4.1/private bookworm-staging/main armhf libllvm14 armhf 1:14.0.6-2+rpi1 [19.5 MB]
Get:103 http://172.17.4.1/private bookworm-staging/main armhf libsensors-config all 1:3.6.0-7.1 [14.3 kB]
Get:104 http://172.17.4.1/private bookworm-staging/main armhf libsensors5 armhf 1:3.6.0-7.1 [31.6 kB]
Get:105 http://172.17.4.1/private bookworm-staging/main armhf libgl1-mesa-dri armhf 22.2.0-1+rpi1 [5593 kB]
Get:106 http://172.17.4.1/private bookworm-staging/main armhf libglx-mesa0 armhf 22.2.0-1+rpi1 [171 kB]
Get:107 http://172.17.4.1/private bookworm-staging/main armhf libglx0 armhf 1.5.0-1 [32.4 kB]
Get:108 http://172.17.4.1/private bookworm-staging/main armhf libgl1 armhf 1.5.0-1 [91.8 kB]
Get:109 http://172.17.4.1/private bookworm-staging/main armhf libgif7 armhf 5.2.1-2.5 [44.7 kB]
Get:110 http://172.17.4.1/private bookworm-staging/main armhf libxi6 armhf 2:1.8-1 [78.1 kB]
Get:111 http://172.17.4.1/private bookworm-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:112 http://172.17.4.1/private bookworm-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:113 http://172.17.4.1/private bookworm-staging/main armhf libxtst6 armhf 2:1.2.3-1.1 [26.3 kB]
Get:114 http://172.17.4.1/private bookworm-staging/main armhf openjdk-11-jre armhf 11.0.16+8-1 [149 kB]
Get:115 http://172.17.4.1/private bookworm-staging/main armhf default-jre armhf 2:1.11-72+b4 [1044 B]
Get:116 http://172.17.4.1/private bookworm-staging/main armhf openjdk-11-jdk-headless armhf 11.0.16+8-1 [173 MB]
Get:117 http://172.17.4.1/private bookworm-staging/main armhf default-jdk-headless armhf 2:1.11-72+b4 [1100 B]
Get:118 http://172.17.4.1/private bookworm-staging/main armhf openjdk-11-jdk armhf 11.0.16+8-1 [4720 kB]
Get:119 http://172.17.4.1/private bookworm-staging/main armhf default-jdk armhf 2:1.11-72+b4 [1056 B]
Get:120 http://172.17.4.1/private bookworm-staging/main armhf libfile-dirlist-perl all 0.05-3 [7600 B]
Get:121 http://172.17.4.1/private bookworm-staging/main armhf libfile-which-perl all 1.27-2 [15.1 kB]
Get:122 http://172.17.4.1/private bookworm-staging/main armhf libfile-homedir-perl all 1.006-1 [43.8 kB]
Get:123 http://172.17.4.1/private bookworm-staging/main armhf libfile-touch-perl all 0.12-2 [8816 B]
Get:124 http://172.17.4.1/private bookworm-staging/main armhf libio-pty-perl armhf 1:1.15-2+b2 [34.5 kB]
Get:125 http://172.17.4.1/private bookworm-staging/main armhf libipc-run-perl all 20220807.0-1 [104 kB]
Get:126 http://172.17.4.1/private bookworm-staging/main armhf libclass-method-modifiers-perl all 2.13-2 [19.4 kB]
Get:127 http://172.17.4.1/private bookworm-staging/main armhf libclass-xsaccessor-perl armhf 1.19-4+b1 [35.5 kB]
Get:128 http://172.17.4.1/private bookworm-staging/main armhf libb-hooks-op-check-perl armhf 0.22-2+b1 [10.3 kB]
Get:129 http://172.17.4.1/private bookworm-staging/main armhf libdynaloader-functions-perl all 0.003-3 [12.7 kB]
Get:130 http://172.17.4.1/private bookworm-staging/main armhf libdevel-callchecker-perl armhf 0.008-1+b4 [15.4 kB]
Get:131 http://172.17.4.1/private bookworm-staging/main armhf libparams-classify-perl armhf 0.015-2+b1 [22.0 kB]
Get:132 http://172.17.4.1/private bookworm-staging/main armhf libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get:133 http://172.17.4.1/private bookworm-staging/main armhf libimport-into-perl all 1.002005-2 [11.3 kB]
Get:134 http://172.17.4.1/private bookworm-staging/main armhf librole-tiny-perl all 2.002004-1 [21.4 kB]
Get:135 http://172.17.4.1/private bookworm-staging/main armhf libsub-quote-perl all 2.006006-1 [21.0 kB]
Get:136 http://172.17.4.1/private bookworm-staging/main armhf libmoo-perl all 2.005004-3 [60.5 kB]
Get:137 http://172.17.4.1/private bookworm-staging/main armhf libencode-locale-perl all 1.05-3 [12.9 kB]
Get:138 http://172.17.4.1/private bookworm-staging/main armhf libtimedate-perl all 2.3300-2 [39.3 kB]
Get:139 http://172.17.4.1/private bookworm-staging/main armhf libhttp-date-perl all 6.05-2 [10.5 kB]
Get:140 http://172.17.4.1/private bookworm-staging/main armhf libfile-listing-perl all 6.15-1 [12.6 kB]
Get:141 http://172.17.4.1/private bookworm-staging/main armhf libhtml-tagset-perl all 3.20-6 [11.7 kB]
Get:142 http://172.17.4.1/private bookworm-staging/main armhf libregexp-ipv6-perl all 0.03-3 [5212 B]
Get:143 http://172.17.4.1/private bookworm-staging/main armhf liburi-perl all 5.16-1 [90.3 kB]
Get:144 http://172.17.4.1/private bookworm-staging/main armhf libhtml-parser-perl armhf 3.79-1+b1 [97.4 kB]
Get:145 http://172.17.4.1/private bookworm-staging/main armhf libhtml-tree-perl all 5.07-2 [213 kB]
Get:146 http://172.17.4.1/private bookworm-staging/main armhf libio-html-perl all 1.004-3 [16.2 kB]
Get:147 http://172.17.4.1/private bookworm-staging/main armhf liblwp-mediatypes-perl all 6.04-1 [19.9 kB]
Get:148 http://172.17.4.1/private bookworm-staging/main armhf libhttp-message-perl all 6.41-1 [81.1 kB]
Get:149 http://172.17.4.1/private bookworm-staging/main armhf libhttp-cookies-perl all 6.10-1 [19.6 kB]
Get:150 http://172.17.4.1/private bookworm-staging/main armhf libhttp-negotiate-perl all 6.01-1 [12.8 kB]
Get:151 http://172.17.4.1/private bookworm-staging/main armhf perl-openssl-defaults armhf 7+b1 [7916 B]
Get:152 http://172.17.4.1/private bookworm-staging/main armhf libnet-ssleay-perl armhf 1.92-2+b2 [297 kB]
Get:153 http://172.17.4.1/private bookworm-staging/main armhf libio-socket-ssl-perl all 2.075-1 [220 kB]
Get:154 http://172.17.4.1/private bookworm-staging/main armhf libnet-http-perl all 6.22-1 [25.3 kB]
Get:155 http://172.17.4.1/private bookworm-staging/main armhf liblwp-protocol-https-perl all 6.10-1 [12.2 kB]
Get:156 http://172.17.4.1/private bookworm-staging/main armhf libtry-tiny-perl all 0.31-2 [22.6 kB]
Get:157 http://172.17.4.1/private bookworm-staging/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get:158 http://172.17.4.1/private bookworm-staging/main armhf libwww-perl all 6.67-1 [194 kB]
Get:159 http://172.17.4.1/private bookworm-staging/main armhf patchutils armhf 0.4.2-1 [68.7 kB]
Get:160 http://172.17.4.1/private bookworm-staging/main armhf libtinfo5 armhf 6.3+20220423-2 [334 kB]
Get:161 http://172.17.4.1/private bookworm-staging/main armhf wdiff armhf 1.2.2-2 [120 kB]
Get:162 http://172.17.4.1/private bookworm-staging/main armhf devscripts armhf 2.22.2 [1181 kB]
Get:163 http://172.17.4.1/private bookworm-staging/main armhf libactivation-java all 1.2.0-2 [84.7 kB]
Get:164 http://172.17.4.1/private bookworm-staging/main armhf unzip armhf 6.0-27 [152 kB]
Get:165 http://172.17.4.1/private bookworm-staging/main armhf java-wrappers all 0.3 [10.9 kB]
Get:166 http://172.17.4.1/private bookworm-staging/main armhf libjaxp1.3-java all 1.3.05-6 [227 kB]
Get:167 http://172.17.4.1/private bookworm-staging/main armhf libxml-commons-external-java all 1.4.01-5 [240 kB]
Get:168 http://172.17.4.1/private bookworm-staging/main armhf libapache-pom-java all 25-2 [5260 B]
Get:169 http://172.17.4.1/private bookworm-staging/main armhf libcommons-parent-java all 43-1 [10.8 kB]
Get:170 http://172.17.4.1/private bookworm-staging/main armhf libcommons-io-java all 2.11.0-2 [319 kB]
Get:171 http://172.17.4.1/private bookworm-staging/main armhf libcommons-logging-java all 1.2-3 [62.4 kB]
Get:172 http://172.17.4.1/private bookworm-staging/main armhf libxmlgraphics-commons-java all 2.6-1 [617 kB]
Get:173 http://172.17.4.1/private bookworm-staging/main armhf libbatik-java all 1.16+dfsg-1 [3908 kB]
Get:174 http://172.17.4.1/private bookworm-staging/main armhf libitext5-java all 5.5.13.3-1 [2634 kB]
Get:175 http://172.17.4.1/private bookworm-staging/main armhf libjam-java all 0.1.git20180106.740247a+dfsg-1 [164 kB]
Get:176 http://172.17.4.1/private bookworm-staging/main armhf libjebl2-java all 0.1+git20201011.969bd4b-1 [516 kB]
Get:177 http://172.17.4.1/private bookworm-staging/main armhf figtree all 1.4.4-5 [872 kB]
Get:178 http://172.17.4.1/private bookworm-staging/main armhf fontconfig armhf 2.13.1-4.5 [416 kB]
Get:179 http://172.17.4.1/private bookworm-staging/main armhf javahelper all 0.78 [97.2 kB]
Get:180 http://172.17.4.1/private bookworm-staging/main armhf libhamcrest-java all 2.2-1 [121 kB]
Get:181 http://172.17.4.1/private bookworm-staging/main armhf junit4 all 4.13.2-3 [348 kB]
Get:182 http://172.17.4.1/private bookworm-staging/main armhf libblas3 armhf 3.10.1-2 [109 kB]
Get:183 http://172.17.4.1/private bookworm-staging/main armhf libpixman-1-0 armhf 0.40.0-1 [463 kB]
Get:184 http://172.17.4.1/private bookworm-staging/main armhf libxcb-render0 armhf 1.15-1 [114 kB]
Get:185 http://172.17.4.1/private bookworm-staging/main armhf libcairo2 armhf 1.16.0-6 [496 kB]
Get:186 http://172.17.4.1/private bookworm-staging/main armhf libclang-common-14-dev armhf 1:14.0.6-2+rpi1 [3698 kB]
Get:187 http://172.17.4.1/private bookworm-staging/main armhf libclang-cpp14 armhf 1:14.0.6-2+rpi1 [9481 kB]
Get:188 http://172.17.4.1/private bookworm-staging/main armhf libclc-14-dev all 1:14.0.6-2+rpi1 [79.1 kB]
Get:189 http://172.17.4.1/private bookworm-staging/main armhf libclc-14 all 1:14.0.6-2+rpi1 [8688 kB]
Get:190 http://172.17.4.1/private bookworm-staging/main armhf libconcurrent-java all 1.3.4-4.1 [137 kB]
Get:191 http://172.17.4.1/private bookworm-staging/main armhf libcolt-free-java all 1.2.0+dfsg-7 [434 kB]
Get:192 http://172.17.4.1/private bookworm-staging/main armhf libcommons-cli-java all 1.4-2 [57.3 kB]
Get:193 http://172.17.4.1/private bookworm-staging/main armhf libcommons-codec-java all 1.15-1 [292 kB]
Get:194 http://172.17.4.1/private bookworm-staging/main armhf libcommons-math-java all 2.2-8 [926 kB]
Get:195 http://172.17.4.1/private bookworm-staging/main armhf libnghttp2-14 armhf 1.50.0-1 [65.0 kB]
Get:196 http://172.17.4.1/private bookworm-staging/main armhf libpsl5 armhf 0.21.0-1.2 [56.2 kB]
Get:197 http://172.17.4.1/private bookworm-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:198 http://172.17.4.1/private bookworm-staging/main armhf libssh2-1 armhf 1.10.0-3+b1 [161 kB]
Get:199 http://172.17.4.1/private bookworm-staging/main armhf libcurl4 armhf 7.85.0-1 [325 kB]
Get:200 http://172.17.4.1/private bookworm-staging/main armhf libdatrie1 armhf 0.2.13-2+b2 [39.9 kB]
Get:201 http://172.17.4.1/private bookworm-staging/main armhf libdeflate0 armhf 1.14-1 [50.9 kB]
Get:202 http://172.17.4.1/private bookworm-staging/main armhf libejml-java all 0.39+ds-1 [2230 kB]
Get:203 http://172.17.4.1/private bookworm-staging/main armhf libf2j-java all 0.8.1+dfsg-5 [62.3 kB]
Get:204 http://172.17.4.1/private bookworm-staging/main armhf libfribidi0 armhf 1.0.8-2.1 [63.7 kB]
Get:205 http://172.17.4.1/private bookworm-staging/main armhf libgfortran5 armhf 12.2.0-3+rpi1 [238 kB]
Get:206 http://172.17.4.1/private bookworm-staging/main armhf ocl-icd-libopencl1 armhf 2.3.1-1 [40.3 kB]
Get:207 http://172.17.4.1/private bookworm-staging/main armhf mesa-opencl-icd armhf 22.2.0-1+rpi1 [5678 kB]
Get:208 http://172.17.4.1/private bookworm-staging/main armhf libhmsbeagle1v5 armhf 3.1.2+dfsg-12 [139 kB]
Get:209 http://172.17.4.1/private bookworm-staging/main armhf libhmsbeagle-java armhf 3.1.2+dfsg-12 [29.0 kB]
Get:210 http://172.17.4.1/private bookworm-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:211 http://172.17.4.1/private bookworm-staging/main armhf libitext1-java all 1.4-7 [1257 kB]
Get:212 http://172.17.4.1/private bookworm-staging/main armhf libjaxen-java all 1.1.6-4 [214 kB]
Get:213 http://172.17.4.1/private bookworm-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:214 http://172.17.4.1/private bookworm-staging/main armhf libjdom1-java all 1.1.3-2.1 [156 kB]
Get:215 http://172.17.4.1/private bookworm-staging/main armhf libjlapack-java all 0.8~dfsg-5 [925 kB]
Get:216 http://172.17.4.1/private bookworm-staging/main armhf liblapack3 armhf 3.10.1-2 [1587 kB]
Get:217 http://172.17.4.1/private bookworm-staging/main armhf liblerc4 armhf 4.0.0+ds-2 [133 kB]
Get:218 http://172.17.4.1/private bookworm-staging/main armhf liblog4j1.2-java all 1.2.17-11 [444 kB]
Get:219 http://172.17.4.1/private bookworm-staging/main armhf libmpj-java all 0.44+dfsg-4 [447 kB]
Get:220 http://172.17.4.1/private bookworm-staging/main armhf libmtj-java all 0.9.14+dfsg-7 [126 kB]
Get:221 http://172.17.4.1/private bookworm-staging/main armhf liboptions-java all 0.0.20120113-3 [28.7 kB]
Get:222 http://172.17.4.1/private bookworm-staging/main armhf libthai-data all 0.1.29-1 [176 kB]
Get:223 http://172.17.4.1/private bookworm-staging/main armhf libthai0 armhf 0.1.29-1 [54.5 kB]
Get:224 http://172.17.4.1/private bookworm-staging/main armhf libpango-1.0-0 armhf 1.50.10+ds-1 [214 kB]
Get:225 http://172.17.4.1/private bookworm-staging/main armhf libpangoft2-1.0-0 armhf 1.50.10+ds-1 [68.6 kB]
Get:226 http://172.17.4.1/private bookworm-staging/main armhf libpangocairo-1.0-0 armhf 1.50.10+ds-1 [58.3 kB]
Get:227 http://172.17.4.1/private bookworm-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:228 http://172.17.4.1/private bookworm-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:229 http://172.17.4.1/private bookworm-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:230 http://172.17.4.1/private bookworm-staging/main armhf libtcl8.6 armhf 8.6.12+dfsg-1 [906 kB]
Get:231 http://172.17.4.1/private bookworm-staging/main armhf libwebp7 armhf 1.2.2-2 [237 kB]
Get:232 http://172.17.4.1/private bookworm-staging/main armhf libtiff5 armhf 4.4.0-5 [277 kB]
Get:233 http://172.17.4.1/private bookworm-staging/main armhf libxft2 armhf 2.3.6-1 [53.7 kB]
Get:234 http://172.17.4.1/private bookworm-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:235 http://172.17.4.1/private bookworm-staging/main armhf libtk8.6 armhf 8.6.12-1 [680 kB]
Get:236 http://172.17.4.1/private bookworm-staging/main armhf libxt6 armhf 1:1.2.1-1 [159 kB]
Get:237 http://172.17.4.1/private bookworm-staging/main armhf zip armhf 3.0-12 [209 kB]
Get:238 http://172.17.4.1/private bookworm-staging/main armhf xdg-utils all 1.1.3-4.1 [75.5 kB]
Get:239 http://172.17.4.1/private bookworm-staging/main armhf r-base-core armhf 4.2.1-3 [27.7 MB]
Get:240 http://172.17.4.1/private bookworm-staging/main armhf r-cran-rjava armhf 1.0-6-1 [918 kB]
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Selecting previously unselected package xdg-utils.
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Unpacking xdg-utils (1.1.3-4.1) ...
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Unpacking r-base-core (4.2.1-3) ...
Selecting previously unselected package r-cran-rjava.
Preparing to unpack .../228-r-cran-rjava_1.0-6-1_armhf.deb ...
Unpacking r-cran-rjava (1.0-6-1) ...
Selecting previously unselected package sbuild-build-depends-main-dummy.
Preparing to unpack .../229-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ...
Setting up media-types (8.0.0) ...
Setting up libpipeline1:armhf (1.5.6-3) ...
Setting up libgraphite2-3:armhf (1.3.14-1) ...
Setting up liblcms2-2:armhf (2.13.1-1) ...
Setting up libpixman-1-0:armhf (0.40.0-1) ...
Setting up libjebl2-java (0.1+git20201011.969bd4b-1) ...
Setting up libicu71:armhf (71.1-3) ...
Setting up libfile-which-perl (1.27-2) ...
Setting up libxau6:armhf (1:1.0.9-1) ...
Setting up libpsl5:armhf (0.21.0-1.2) ...
Setting up liblerc4:armhf (4.0.0+ds-2) ...
Setting up bsdextrautils (2.38.1-1.1) ...
Setting up libmtj-java (0.9.14+dfsg-7) ...
Setting up java-common (0.72) ...
Setting up libdynaloader-functions-perl (0.003-3) ...
Setting up libdatrie1:armhf (0.2.13-2+b2) ...
Setting up libclass-method-modifiers-perl (2.13-2) ...
Setting up libcommons-cli-java (1.4-2) ...
Setting up libio-pty-perl (1:1.15-2+b2) ...
Setting up libmagic-mgc (1:5.41-4) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.74.1-1) ...
No schema files found: doing nothing.
Setting up libglvnd0:armhf (1.5.0-1) ...
Setting up libhtml-tagset-perl (3.20-6) ...
Setting up unzip (6.0-27) ...
Setting up libdebhelper-perl (13.10.1) ...
Setting up libbrotli1:armhf (1.0.9-2+b2) ...
Setting up liblwp-mediatypes-perl (6.04-1) ...
Setting up x11-common (1:7.7+23) ...
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of restart.
Setting up libtry-tiny-perl (0.31-2) ...
Setting up libsensors-config (1:3.6.0-7.1) ...
Setting up libnghttp2-14:armhf (1.50.0-1) ...
Setting up libmagic1:armhf (1:5.41-4) ...
Setting up libdeflate0:armhf (1.14-1) ...
Setting up perl-openssl-defaults:armhf (7+b1) ...
Setting up liblog4j1.2-java (1.2.17-11) ...
Setting up gettext-base (0.21-9) ...
Setting up m4 (1.4.19-1) ...
Setting up libencode-locale-perl (1.05-3) ...
Setting up file (1:5.41-4) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libasound2-data (1.2.7.2-1) ...
Setting up patchutils (0.4.2-1) ...
Setting up zip (3.0-12) ...
Setting up autotools-dev (20220109.1) ...
Setting up libz3-4:armhf (4.8.12-1) ...
Setting up libblas3:armhf (3.10.1-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libjpeg62-turbo:armhf (1:2.1.2-1) ...
Setting up libjaxen-java (1.1.6-4) ...
Setting up libx11-data (2:1.8.1-2) ...
Setting up libnspr4:armhf (2:4.35-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libapache-pom-java (25-2) ...
Setting up libavahi-common-data:armhf (0.8-6+b1) ...
Setting up libdbus-1-3:armhf (1.14.4-1) ...
Setting up libfribidi0:armhf (1.0.8-2.1) ...
Setting up libpng16-16:armhf (1.6.38-2) ...
Setting up libitext5-java (5.5.13.3-1) ...
Setting up libitext1-java (1.4-7) ...
Setting up libio-html-perl (1.004-3) ...
Setting up libtcl8.6:armhf (8.6.12+dfsg-1) ...
Setting up autopoint (0.21-9) ...
Setting up libb-hooks-op-check-perl:armhf (0.22-2+b1) ...
Setting up fonts-dejavu-core (2.37-2) ...
Setting up libipc-run-perl (20220807.0-1) ...
Setting up libpcsclite1:armhf (1.9.9-1) ...
Setting up libclc-14-dev (1:14.0.6-2+rpi1) ...
Setting up ucf (3.0043) ...
Setting up libsensors5:armhf (1:3.6.0-7.1) ...
Setting up libactivation-java (1.2.0-2) ...
Setting up libhamcrest-java (2.2-1) ...
Setting up libglapi-mesa:armhf (22.2.0-1+rpi1) ...
Setting up libgfortran5:armhf (12.2.0-3+rpi1) ...
Setting up autoconf (2.71-2) ...
Setting up libwebp7:armhf (1.2.2-2) ...
Setting up libtimedate-perl (2.3300-2) ...
Setting up libregexp-ipv6-perl (0.03-3) ...
Setting up libgif7:armhf (5.2.1-2.5) ...
Setting up libmd0:armhf (1.0.4-2) ...
Setting up ocl-icd-libopencl1:armhf (2.3.1-1) ...
Setting up libxshmfence1:armhf (1.3-1) ...
Setting up libcommons-math-java (2.2-8) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libxml-commons-external-java (1.4.01-5) ...
Setting up libasound2:armhf (1.2.7.2-1) ...
Setting up libmpdec3:armhf (2.5.1-2+rpi1) ...
Setting up librole-tiny-perl (2.002004-1) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libthai-data (0.1.29-1) ...
Setting up libssh2-1:armhf (1.10.0-3+b1) ...
Setting up netbase (6.4) ...
Setting up libsub-quote-perl (2.006006-1) ...
Setting up libclass-xsaccessor-perl (1.19-4+b1) ...
Setting up libtiff5:armhf (4.4.0-5) ...
Setting up libjam-java (0.1.git20180106.740247a+dfsg-1) ...
Setting up libfile-dirlist-perl (0.05-3) ...
Setting up libjaxp1.3-java (1.3.05-6) ...
Setting up libfile-homedir-perl (1.006-1) ...
Setting up openssl (3.0.7-1) ...
Setting up libbsd0:armhf (0.11.7-1) ...
Setting up libtinfo5:armhf (6.3+20220423-2) ...
Setting up libdrm-common (2.4.113-2+rpi1) ...
Setting up libelf1:armhf (0.187-2+rpi2) ...
Setting up libejml-java (0.39+ds-1) ...
Setting up libxml2:armhf (2.9.14+dfsg-1) ...
Setting up xdg-utils (1.1.3-4.1) ...
update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
Setting up liburi-perl (5.16-1) ...
Setting up libfile-touch-perl (0.12-2) ...
Setting up dctrl-tools (2.24-3) ...
Setting up libf2j-java (0.8.1+dfsg-5) ...
Setting up libnet-ssleay-perl:armhf (1.92-2+b2) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.0-1) ...
Setting up libjlapack-java (0.8~dfsg-5) ...
Setting up wdiff (1.2.2-2) ...
Setting up libpaper1:armhf (1.1.28) ...

Creating config file /etc/papersize with new version
Setting up libice6:armhf (2:1.0.10-1) ...
Setting up libhttp-date-perl (6.05-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.10.1-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libxcb1:armhf (1.15-1) ...
Setting up gettext (0.21-9) ...
Setting up libxcb-xfixes0:armhf (1.15-1) ...
Setting up java-wrappers (0.3) ...
Setting up libfile-listing-perl (6.15-1) ...
Setting up libtool (2.4.7-4) ...
Setting up libxcb-render0:armhf (1.15-1) ...
Setting up fontconfig-config (2.13.1-4.5) ...
Setting up libjdom1-java (1.1.3-2.1) ...
Setting up libxcb-glx0:armhf (1.15-1) ...
Setting up libedit2:armhf (3.1-20221009-1) ...
Setting up libcommons-parent-java (43-1) ...
Setting up libavahi-common3:armhf (0.8-6+b1) ...
Setting up libcommons-logging-java (1.2-3) ...
Setting up libnet-http-perl (6.22-1) ...
Setting up libnss3:armhf (2:3.83-1) ...
Setting up libxcb-shm0:armhf (1.15-1) ...
Setting up libpaper-utils (1.1.28) ...
Setting up libdevel-callchecker-perl (0.008-1+b4) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up libxcb-present0:armhf (1.15-1) ...
Setting up libpython3.10-stdlib:armhf (3.10.8-1) ...
Setting up dh-autoreconf (20) ...
Setting up libthai0:armhf (0.1.29-1) ...
Setting up ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
127 added, 0 removed; done.
Setting up liboptions-java (0.0.20120113-3) ...
Setting up libfreetype6:armhf (2.12.1+dfsg-3) ...
Setting up libxcb-sync1:armhf (1.15-1) ...
Setting up libxcb-dri2-0:armhf (1.15-1) ...
Setting up dh-strip-nondeterminism (1.13.0-1) ...
Setting up libllvm14:armhf (1:14.0.6-2+rpi1) ...
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up libdrm2:armhf (2.4.113-2+rpi1) ...
Setting up dwz (0.14+20220924-2) ...
Setting up groff-base (1.22.4-8) ...
Setting up libhtml-parser-perl:armhf (3.79-1+b1) ...
Setting up libcurl4:armhf (7.85.0-1) ...
Setting up libx11-6:armhf (2:1.8.1-2) ...
Setting up libharfbuzz0b:armhf (5.2.0-2) ...
Setting up ca-certificates-java (20220719) ...
Adding debian:ACCVRAIZ1.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem
Adding debian:ANF_Secure_Server_Root_CA.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Certigna.pem
Adding debian:Certigna_Root_CA.pem
Adding debian:Certum_EC-384_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Certum_Trusted_Root_CA.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:EC-ACC.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:GLOBALTRUST_2020.pem
Adding debian:GTS_Root_R1.pem
Adding debian:GTS_Root_R2.pem
Adding debian:GTS_Root_R3.pem
Adding debian:GTS_Root_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:GlobalSign_Root_E46.pem
Adding debian:GlobalSign_Root_R46.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:Hongkong_Post_Root_CA_3.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
Adding debian:NAVER_Global_Root_Certification_Authority.pem
Warning: there was a problem reading the certificate file /etc/ssl/certs/NetLock_Arany_=Class_Gold=_F?tan?s?tv?ny.pem. Message:
  /etc/ssl/certs/NetLock_Arany_=Class_Gold=_F?tan?s?tv?ny.pem (No such file or directory)
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:TrustCor_ECA-1.pem
Adding debian:TrustCor_RootCert_CA-1.pem
Adding debian:TrustCor_RootCert_CA-2.pem
Adding debian:Trustwave_Global_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
Adding debian:UCA_Extended_Validation_Root.pem
Adding debian:UCA_Global_G2_Root.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:certSIGN_Root_CA_G2.pem
Adding debian:e-Szigno_Root_CA_2017.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:emSign_ECC_Root_CA_-_C3.pem
Adding debian:emSign_ECC_Root_CA_-_G3.pem
Adding debian:emSign_Root_CA_-_C1.pem
Adding debian:emSign_Root_CA_-_G1.pem
done.
Setting up libcommons-codec-java (1.15-1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libavahi-client3:armhf (0.8-6+b1) ...
Setting up libio-socket-ssl-perl (2.075-1) ...
Setting up libpython3-stdlib:armhf (3.10.6-1) ...
Setting up libhttp-message-perl (6.41-1) ...
Setting up libdrm-amdgpu1:armhf (2.4.113-2+rpi1) ...
Setting up libxcb-dri3-0:armhf (1.15-1) ...
Setting up libx11-xcb1:armhf (2:1.8.1-2) ...
Setting up libhttp-negotiate-perl (6.01-1) ...
Setting up libdrm-nouveau2:armhf (2.4.113-2+rpi1) ...
Setting up python3.10 (3.10.8-1) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up libhttp-cookies-perl (6.10-1) ...
Setting up libcommons-io-java (2.11.0-2) ...
Setting up libdrm-radeon1:armhf (2.4.113-2+rpi1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libhtml-tree-perl (5.07-2) ...
Setting up libparams-classify-perl:armhf (0.015-2+b1) ...
Setting up libgl1-mesa-dri:armhf (22.2.0-1+rpi1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up libxmlgraphics-commons-java (2.6-1) ...
Setting up python3 (3.10.6-1) ...
Setting up man-db (2.11.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up libmpj-java (0.44+dfsg-4) ...
Setting up libmodule-runtime-perl (0.016-2) ...
Setting up libxfixes3:armhf (1:6.0.0-2) ...
Setting up libclang-common-14-dev (1:14.0.6-2+rpi1) ...
Setting up libclang-cpp14 (1:14.0.6-2+rpi1) ...
Setting up libxt6:armhf (1:1.2.1-1) ...
Setting up libcups2:armhf (2.4.2-1+b1) ...
Setting up libclc-14 (1:14.0.6-2+rpi1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up mesa-opencl-icd:armhf (22.2.0-1+rpi1) ...
Setting up libglx-mesa0:armhf (22.2.0-1+rpi1) ...
Setting up libxi6:armhf (2:1.8-1) ...
Setting up libglx0:armhf (1.5.0-1) ...
Setting up libimport-into-perl (1.002005-2) ...
Setting up libxtst6:armhf (2:1.2.3-1.1) ...
Setting up libbatik-java (1.16+dfsg-1) ...
Setting up libmoo-perl (2.005004-3) ...
Setting up libhmsbeagle1v5:armhf (3.1.2+dfsg-12) ...
Setting up debhelper (13.10.1) ...
Setting up libgl1:armhf (1.5.0-1) ...
Setting up libhmsbeagle-java:armhf (3.1.2+dfsg-12) ...
Setting up liblwp-protocol-https-perl (6.10-1) ...
Setting up libwww-perl (6.67-1) ...
Setting up devscripts (2.22.2) ...
Setting up javahelper (0.78) ...
Processing triggers for libc-bin (2.35-2+rpi1) ...
Processing triggers for sgml-base (1.31) ...
Setting up libfontconfig1:armhf (2.13.1-4.5) ...
Setting up fontconfig (2.13.1-4.5) ...
Regenerating fonts cache... done.
Setting up libxft2:armhf (2.3.6-1) ...
Setting up libtk8.6:armhf (8.6.12-1) ...
Setting up libpango-1.0-0:armhf (1.50.10+ds-1) ...
Setting up openjdk-11-jre-headless:armhf (11.0.16+8-1) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up libconcurrent-java (1.3.4-4.1) ...
Setting up openjdk-11-jre:armhf (11.0.16+8-1) ...
Setting up openjdk-11-jdk-headless:armhf (11.0.16+8-1) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up libcairo2:armhf (1.16.0-6) ...
Setting up ant (1.10.12-3) ...
Setting up libcolt-free-java (1.2.0+dfsg-7) ...
Setting up openjdk-11-jdk:armhf (11.0.16+8-1) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-armhf/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
Setting up libpangoft2-1.0-0:armhf (1.50.10+ds-1) ...
Setting up libpangocairo-1.0-0:armhf (1.50.10+ds-1) ...
Setting up junit4 (4.13.2-3) ...
Setting up default-jre-headless (2:1.11-72+b4) ...
Setting up default-jre (2:1.11-72+b4) ...
Setting up ant-optional (1.10.12-3) ...
Setting up default-jdk-headless (2:1.11-72+b4) ...
Setting up r-base-core (4.2.1-3) ...

Creating config file /etc/R/Renviron with new version
Setting up r-cran-rjava (1.0-6-1) ...
Setting up default-jdk (2:1.11-72+b4) ...
Setting up figtree (1.4.4-5) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for libc-bin (2.35-2+rpi1) ...
Processing triggers for ca-certificates-java (20220719) ...
done.

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.19.20-v7+ #1 SMP Mon Mar 18 11:37:02 GMT 2019 armhf (armv7l)
Toolchain package versions: binutils_2.39-6+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-3+rpi1 gcc-12_12.2.0-3+rpi1 libc6-dev_2.35-2+rpi1 libstdc++-12-dev_12.2.0-3+rpi1 libstdc++6_12.2.0-3+rpi1 linux-libc-dev_5.19.6-1+rpi1
Package versions: adduser_3.129 ant_1.10.12-3 ant-optional_1.10.12-3 apt_2.5.3 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-9 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2~rc2-2 binutils_2.39-6+rpi1 binutils-arm-linux-gnueabihf_2.39-6+rpi1 binutils-common_2.39-6+rpi1 bsdextrautils_2.38.1-1.1 bsdutils_1:2.38.1-1.1 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20211016 ca-certificates-java_20220719 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-3+rpi1 dash_0.5.11+git20210903+057cd650a4ed-9 dctrl-tools_2.24-3 debconf_1.5.79 debhelper_13.10.1 debianutils_5.7-0.3 default-jdk_2:1.11-72+b4 default-jdk-headless_2:1.11-72+b4 default-jre_2:1.11-72+b4 default-jre-headless_2:1.11-72+b4 devscripts_2.22.2 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dirmngr_2.2.39-1 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.14+20220924-2 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 figtree_1.4.4-5 file_1:5.41-4 findutils_4.9.0-3 fontconfig_2.13.1-4.5 fontconfig-config_2.13.1-4.5 fonts-dejavu-core_2.37-2 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-3+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-3+rpi1 gcc-12-base_12.2.0-3+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-9 gettext-base_0.21-9 gnupg_2.2.39-1 gnupg-l10n_2.2.39-1 gnupg-utils_2.2.39-1 gpg_2.2.39-1 gpg-agent_2.2.39-1 gpg-wks-client_2.2.39-1 gpg-wks-server_2.2.39-1 gpgconf_2.2.39-1 gpgsm_2.2.39-1 gpgv_2.2.39-1 grep_3.7-1 groff-base_1.22.4-8 gzip_1.12-1 hostname_3.23 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20211215-1 java-common_0.72 java-wrappers_0.3 javahelper_0.78 junit4_4.13.2-3 krb5-locales_1.20-1 libacl1_2.3.1-1 libactivation-java_1.2.0-2 libapache-pom-java_25-2 libapt-pkg6.0_2.5.3 libarchive-zip-perl_1.68-1 libasan8_12.2.0-3+rpi1 libasound2_1.2.7.2-1 libasound2-data_1.2.7.2-1 libassuan0_2.5.5-4 libatomic1_12.2.0-3+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1 libavahi-client3_0.8-6+b1 libavahi-common-data_0.8-6+b1 libavahi-common3_0.8-6+b1 libb-hooks-op-check-perl_0.22-2+b1 libbatik-java_1.16+dfsg-1 libbinutils_2.39-6+rpi1 libblas3_3.10.1-2 libblkid1_2.38.1-1.1 libbrotli1_1.0.9-2+b2 libbsd0_0.11.7-1 libbz2-1.0_1.0.8-5+b2 libc-bin_2.35-2+rpi1 libc-dev-bin_2.35-2+rpi1 libc6_2.35-2+rpi1 libc6-dev_2.35-2+rpi1 libcairo2_1.16.0-6 libcap-ng0_0.8.3-1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_12.2.0-3+rpi1 libclang-common-14-dev_1:14.0.6-2+rpi1 libclang-cpp14_1:14.0.6-2+rpi1 libclass-method-modifiers-perl_2.13-2 libclass-xsaccessor-perl_1.19-4+b1 libclc-14_1:14.0.6-2+rpi1 libclc-14-dev_1:14.0.6-2+rpi1 libcolt-free-java_1.2.0+dfsg-7 libcom-err2_1.46.6~rc1-1 libcommons-cli-java_1.4-2 libcommons-codec-java_1.15-1 libcommons-io-java_2.11.0-2 libcommons-logging-java_1.2-3 libcommons-math-java_2.2-8 libcommons-parent-java_43-1 libconcurrent-java_1.3.4-4.1 libcrypt-dev_1:4.4.28-2 libcrypt1_1:4.4.28-2 libctf-nobfd0_2.39-6+rpi1 libctf0_2.39-6+rpi1 libcups2_2.4.2-1+b1 libcurl4_7.85.0-1 libdatrie1_0.2.13-2+b2 libdb5.3_5.3.28+dfsg1-0.10 libdbus-1-3_1.14.4-1 libdebconfclient0_0.264 libdebhelper-perl_13.10.1 libdeflate0_1.14-1 libdevel-callchecker-perl_0.008-1+b4 libdpkg-perl_1.21.9+rpi1 libdrm-amdgpu1_2.4.113-2+rpi1 libdrm-common_2.4.113-2+rpi1 libdrm-nouveau2_2.4.113-2+rpi1 libdrm-radeon1_2.4.113-2+rpi1 libdrm2_2.4.113-2+rpi1 libdynaloader-functions-perl_0.003-3 libedit2_3.1-20221009-1 libejml-java_0.39+ds-1 libelf1_0.187-2+rpi2 libencode-locale-perl_1.05-3 libexpat1_2.5.0-1 libext2fs2_1.46.6~rc1-1 libf2j-java_0.8.1+dfsg-5 libfakeroot_1.29-1 libffi8_3.4.2-4 libfile-dirlist-perl_0.05-3 libfile-homedir-perl_1.006-1 libfile-listing-perl_6.15-1 libfile-stripnondeterminism-perl_1.13.0-1 libfile-touch-perl_0.12-2 libfile-which-perl_1.27-2 libfontconfig1_2.13.1-4.5 libfreetype6_2.12.1+dfsg-3 libfribidi0_1.0.8-2.1 libgcc-12-dev_12.2.0-3+rpi1 libgcc-s1_12.2.0-3+rpi1 libgcrypt20_1.10.1-2+b2 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgfortran5_12.2.0-3+rpi1 libgif7_5.2.1-2.5 libgl1_1.5.0-1 libgl1-mesa-dri_22.2.0-1+rpi1 libglapi-mesa_22.2.0-1+rpi1 libglib2.0-0_2.74.1-1 libglvnd0_1.5.0-1 libglx-mesa0_22.2.0-1+rpi1 libglx0_1.5.0-1 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-2 libgomp1_12.2.0-3+rpi1 libgpg-error0_1.45-2 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.20-1 libhamcrest-java_2.2-1 libharfbuzz0b_5.2.0-2 libhmsbeagle-java_3.1.2+dfsg-12 libhmsbeagle1v5_3.1.2+dfsg-12 libhogweed6_3.8.1-2 libhtml-parser-perl_3.79-1+b1 libhtml-tagset-perl_3.20-6 libhtml-tree-perl_5.07-2 libhttp-cookies-perl_6.10-1 libhttp-date-perl_6.05-2 libhttp-message-perl_6.41-1 libhttp-negotiate-perl_6.01-1 libice6_2:1.0.10-1 libicu71_71.1-3 libidn2-0_2.3.3-1 libimport-into-perl_1.002005-2 libio-html-perl_1.004-3 libio-pty-perl_1:1.15-2+b2 libio-socket-ssl-perl_2.075-1 libipc-run-perl_20220807.0-1 libisl23_0.25-1 libitext1-java_1.4-7 libitext5-java_5.5.13.3-1 libjam-java_0.1.git20180106.740247a+dfsg-1 libjaxen-java_1.1.6-4 libjaxp1.3-java_1.3.05-6 libjbig0_2.1-3.1+b2 libjdom1-java_1.1.3-2.1 libjebl2-java_0.1+git20201011.969bd4b-1 libjlapack-java_0.8~dfsg-5 libjpeg62-turbo_1:2.1.2-1 libk5crypto3_1.20-1 libkeyutils1_1.6.3-1 libkrb5-3_1.20-1 libkrb5support0_1.20-1 libksba8_1.6.0-3 liblapack3_3.10.1-2 liblcms2-2_2.13.1-1 libldap-2.5-0_2.5.13+dfsg-2+rpi1 liblerc4_4.0.0+ds-2 libllvm14_1:14.0.6-2+rpi1 liblog4j1.2-java_1.2.17-11 liblwp-mediatypes-perl_6.04-1 liblwp-protocol-https-perl_6.10-1 liblz4-1_1.9.4-1+rpi1 liblzma5_5.2.5-2.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmd0_1.0.4-2 libmodule-runtime-perl_0.016-2 libmoo-perl_2.005004-3 libmount1_2.38.1-1.1 libmpc3_1.2.1-2 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libmpj-java_0.44+dfsg-4 libmtj-java_0.9.14+dfsg-7 libncursesw6_6.3+20220423-2 libnet-http-perl_6.22-1 libnet-ssleay-perl_1.92-2+b2 libnettle8_3.8.1-2 libnghttp2-14_1.50.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnspr4_2:4.35-1 libnss3_2:3.83-1 liboptions-java_0.0.20120113-3 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libsqlite3-0_3.39.4-1 libss2_1.46.6~rc1-1 libssh2-1_1.10.0-3+b1 libssl1.1_1.1.1o-1 libssl3_3.0.7-1 libstdc++-12-dev_12.2.0-3+rpi1 libstdc++6_12.2.0-3+rpi1 libsub-override-perl_0.09-4 libsub-quote-perl_2.006006-1 libsystemd0_251.5-1+rpi1 libtasn1-6_4.19.0-2 libtcl8.6_8.6.12+dfsg-1 libthai-data_0.1.29-1 libthai0_0.1.29-1 libtiff5_4.4.0-5 libtimedate-perl_2.3300-2 libtinfo5_6.3+20220423-2 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtk8.6_8.6.12-1 libtool_2.4.7-4 libtry-tiny-perl_0.31-2 libubsan1_12.2.0-3+rpi1 libuchardet0_0.0.7-1 libudev1_251.5-1+rpi1 libunistring2_1.0-2 liburi-perl_5.16-1 libuuid1_2.38.1-1.1 libwebp7_1.2.2-2 libwww-perl_6.67-1 libwww-robotrules-perl_6.02-1 libx11-6_2:1.8.1-2 libx11-data_2:1.8.1-2 libx11-xcb1_2:1.8.1-2 libxau6_1:1.0.9-1 libxcb-dri2-0_1.15-1 libxcb-dri3-0_1.15-1 libxcb-glx0_1.15-1 libxcb-present0_1.15-1 libxcb-render0_1.15-1 libxcb-shm0_1.15-1 libxcb-sync1_1.15-1 libxcb-xfixes0_1.15-1 libxcb1_1.15-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxfixes3_1:6.0.0-2 libxft2_2.3.6-1 libxi6_2:1.8-1 libxml-commons-external-java_1.4.01-5 libxml2_2.9.14+dfsg-1 libxmlgraphics-commons-java_2.6-1 libxrender1_1:0.9.10-1.1 libxshmfence1_1.3-1 libxss1_1:1.2.3-1 libxt6_1:1.2.1-1 libxtst6_2:1.2.3-1.1 libxxf86vm1_1:1.1.4-1+b2 libxxhash0_0.8.1-1 libz3-4_4.8.12-1 libzstd1_1.5.2+dfsg-1 linux-libc-dev_5.19.6-1+rpi1 login_1:4.12.3+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-1 make_4.3-4.1 man-db_2.11.0-1 mawk_1.3.4.20200120-3.1 media-types_8.0.0 mesa-opencl-icd_22.2.0-1+rpi1 mount_2.38.1-1.1 nano_6.4-1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 netbase_6.4 ocl-icd-libopencl1_2.3.1-1 openjdk-11-jdk_11.0.16+8-1 openjdk-11-jdk-headless_11.0.16+8-1 openjdk-11-jre_11.0.16+8-1 openjdk-11-jre-headless_11.0.16+8-1 openssl_3.0.7-1 passwd_1:4.12.3+dfsg1-1 patch_2.7.6-7 patchutils_0.4.2-1 perl_5.36.0-4 perl-base_5.36.0-4 perl-modules-5.32_5.32.1-6 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-4 perl-openssl-defaults_7+b1 pinentry-curses_1.2.0-2 po-debconf_1.0.21+nmu1 python3_3.10.6-1 python3-minimal_3.10.6-1 python3.10_3.10.8-1 python3.10-minimal_3.10.8-1 r-base-core_4.2.1-3 r-cran-rjava_1.0-6-1 raspbian-archive-keyring_20120528.2 readline-common_8.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 sysvinit-utils_3.05-6 tar_1.34+dfsg-1 tzdata_2022d-1 ucf_3.0043 unzip_6.0-27 util-linux_2.38.1-1.1 util-linux-extra_2.38.1-1.1 wdiff_1.2.2-2 x11-common_1:7.7+23 xdg-utils_1.1.3-4.1 xz-utils_5.2.5-2.1 zip_3.0-12 zlib1g_1:1.2.11.dfsg-4.1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 3.0 (quilt)
Source: beast-mcmc
Binary: beast-mcmc, libnucleotidelikelihoodcore0, beast-mcmc-examples
Architecture: any all
Version: 1.10.4+dfsg-4
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>, Olivier Sallou <osallou@debian.org>
Homepage: http://beast.bio.ed.ac.uk/
Standards-Version: 4.6.1
Vcs-Browser: https://salsa.debian.org/med-team/beast-mcmc
Vcs-Git: https://salsa.debian.org/med-team/beast-mcmc.git
Build-Depends: debhelper-compat (= 13), javahelper, ant, ant-optional, default-jdk, libjebl2-java, libjam-java, figtree, liboptions-java, libhmsbeagle-java, libcolt-free-java, libmpj-java, r-cran-rjava, libcommons-math-java, libjdom1-java, junit4, libmtj-java, libitext1-java, libejml-java (>= 0.38), libjlapack-java
Package-List:
 beast-mcmc deb science optional arch=all
 beast-mcmc-examples deb doc optional arch=all
 libnucleotidelikelihoodcore0 deb libs optional arch=any
Checksums-Sha1:
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 f406dcb64d0a912f8bb1768d3fa80a6aa91a86a1 25300 beast-mcmc_1.10.4+dfsg-4.debian.tar.xz
Checksums-Sha256:
 66740f5e242c4b31dab1e20b893ec1b0b2850fda189670e82c3001b4f89fcf66 5022024 beast-mcmc_1.10.4+dfsg.orig.tar.xz
 a1ac739a8af993e145530371cf4d2d84c7632f83c62a7541ec99c90f0139d29c 25300 beast-mcmc_1.10.4+dfsg-4.debian.tar.xz
Files:
 912419d44da25de2579a39bf104c013f 5022024 beast-mcmc_1.10.4+dfsg.orig.tar.xz
 50443c018b43dab438c19edd198a819c 25300 beast-mcmc_1.10.4+dfsg-4.debian.tar.xz

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gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.NPVaaNKF/trustedkeys.kbx': General error
gpgv: Signature made Tue Nov  1 18:54:35 2022 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./beast-mcmc_1.10.4+dfsg-4.dsc
dpkg-source: info: extracting beast-mcmc in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking beast-mcmc_1.10.4+dfsg.orig.tar.xz
dpkg-source: info: unpacking beast-mcmc_1.10.4+dfsg-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying enable_hardening.patch
dpkg-source: info: applying fix_classpath_in_build_xml.patch
dpkg-source: info: applying create_soname.patch
dpkg-source: info: applying fix_encoding.patch
dpkg-source: info: applying ignore_mac_install.patch
dpkg-source: info: applying update-ejml.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/112/bus
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INVOCATION_ID=79d111ecf76d4d72929efb4c6c309344
JOURNAL_STREAM=8:26624
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=117
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-b7a11ba0-76e6-4023-af1e-6c6ee54741a5
SCHROOT_UID=112
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
XDG_RUNTIME_DIR=/run/user/112
XDG_SESSION_CLASS=background
XDG_SESSION_ID=c167883
XDG_SESSION_TYPE=unspecified

dpkg-buildpackage
-----------------

Command: dpkg-buildpackage -us -uc -mRaspbian pi4 based autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package beast-mcmc
dpkg-buildpackage: info: source version 1.10.4+dfsg-4
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --with javahelper
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -f native/*\.o native/*\.so native/*\.so\.*
ant clean
Buildfile: /<<PKGBUILDDIR>>/build.xml

clean:

BUILD SUCCESSFUL
Total time: 1 second
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   jh_clean
   dh_clean
 debian/rules binary-arch
dh binary-arch --with javahelper
   dh_update_autotools_config -a
   dh_autoreconf -a
   dh_auto_configure -a
   jh_linkjars -a
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
# CLASSPATH=/usr/share/ant/lib/ant.jar:/usr/share/ant/lib/ant-launcher.jar:/usr/share/ant/lib/ant-nodeps.jar:/usr/share/ant/lib/ant-junit.jar:/usr/lib/jvm/default-java/lib/tools.jar:/usr/share/java/beagle.jar:/usr/share/java/mpj.jar:/usr/share/java/org.boehn.kmlframework.jar:/usr/share/java/itext1-1.4.jar:/usr/share/java/junit4.jar:/usr/share/java/figtree.jar:lib/colt.jar:/usr/share/java/options.jar:/usr/share/java/mtj.jar:/usr/share/java/jam.jar:/usr/share/java/jdom1.jar:/usr/share/java/jebl.jar:/usr/share/java/commons-math.jar:/usr/share/java/EJML.jar:/usr/share/java/jlapack-lapack.jar:/usr/lib/R/site-library/rJava/jri/JRI.jar
mkdir -p lib
ant build
Buildfile: /<<PKGBUILDDIR>>/build.xml

init:
     [echo] BEAST: /<<PKGBUILDDIR>>/build.xml

compile-all:
    [mkdir] Created dir: /<<PKGBUILDDIR>>/build
    [javac] /<<PKGBUILDDIR>>/build.xml:102: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds
    [javac] Compiling 2503 source files to /<<PKGBUILDDIR>>/build
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 6
    [javac] warning: [options] source value 6 is obsolete and will be removed in a future release
    [javac] warning: [options] target value 1.6 is obsolete and will be removed in a future release
    [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
    [javac] Note: Some input files use or override a deprecated API.
    [javac] Note: Recompile with -Xlint:deprecation for details.
    [javac] Note: Some input files use unchecked or unsafe operations.
    [javac] Note: Recompile with -Xlint:unchecked for details.
    [javac] 4 warnings
    [javac] Creating empty /<<PKGBUILDDIR>>/build/dr/evomodel/alloppnet/package-info.class
     [echo] Successfully compiled.

dist:
    [mkdir] Created dir: /<<PKGBUILDDIR>>/build/dist
      [jar] Building jar: /<<PKGBUILDDIR>>/build/dist/beast.jar
      [jar] Building jar: /<<PKGBUILDDIR>>/build/dist/beauti.jar
      [jar] Building jar: /<<PKGBUILDDIR>>/build/dist/trace.jar

linux:
    [mkdir] Created dir: /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4
     [copy] Copying 6 files to /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4/bin
     [copy] Copying 1 file to /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4/doc
     [copy] Copying 158 files to /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4/examples
     [copy] Copying 18 files to /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4/native
     [copy] Copying 1 file to /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4/images
     [copy] Copying 1 file to /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4/images
     [copy] Copying 1 file to /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4/images
     [copy] Copying 1 file to /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4/lib
     [copy] Copying 1 file to /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4/lib
     [copy] Copying 1 file to /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4
     [copy] Copying 1 file to /<<PKGBUILDDIR>>/release/Linux/BEASTv1.10.4
     [echo] Have to tar manaully, because [ANT Bug 550] the tar task change the mode of the executables files.
     [echo] Linux/Unix version release is finished.

build:

BUILD SUCCESSFUL
Total time: 1 minute 53 seconds
# FIXME: There is no such file build_tracer.xml any more
# ant -buildfile build_tracer.xml dist
# native/compileNativeLinux.sh does not create dynamic libraries
cd native ; /usr/bin/make -f Makefile.linux JAVA_HOME=/usr/lib/jvm/default-java
make[2]: Entering directory '/<<PKGBUILDDIR>>/native'
gcc -O2 -funroll-loops -I/usr/lib/jvm/default-java/include/ -I/usr/lib/jvm/default-java/include/linux -c NucleotideLikelihoodCore.c
gcc -O2 -funroll-loops -I/usr/lib/jvm/default-java/include/ -I/usr/lib/jvm/default-java/include/linux -shared -Wl,-soname,libNucleotideLikelihoodCore.so.0 -o libNucleotideLikelihoodCore.so.0 NucleotideLikelihoodCore.o
make[2]: Leaving directory '/<<PKGBUILDDIR>>/native'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
#####################################################################
## Run test suite                                                  ##
## --------------                                                  ##
## While this test suite runs quite a bit of time (about 30min) it ##
## is recommended to be run at least once per new version upload   ##
#####################################################################
#
# /usr/lib/jvm/default-java/bin/java -classpath /usr/share/ant/lib/ant.jar:/usr/share/ant/lib/ant-launcher.jar:/usr/share/ant/lib/ant-nodeps.jar:/usr/share/ant/lib/ant-junit.jar:/usr/lib/jvm/default-java/lib/tools.jar:/usr/share/java/beagle.jar:/usr/share/java/mpj.jar:/usr/share/java/org.boehn.kmlframework.jar:/usr/share/java/itext1-1.4.jar:/usr/share/java/junit4.jar:/usr/share/java/figtree.jar:lib/colt.jar:/usr/share/java/options.jar:/usr/share/java/mtj.jar:/usr/share/java/jam.jar:/usr/share/java/jdom1.jar:/usr/share/java/jebl.jar:/usr/share/java/commons-math.jar:/usr/share/java/EJML.jar:/usr/share/java/jlapack-lapack.jar:/usr/lib/R/site-library/rJava/jri/JRI.jar -Dant.home=/usr/share/ant org.apache.tools.ant.Main -Dcompile.debug=true -Dcompile.optimize=true -buildfile build.xml junit
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   create-stamp debian/debhelper-build-stamp
   dh_prep -a
   dh_auto_install -a
   dh_install -a
   jh_installjavadoc -a
   dh_installdocs -a
   dh_installchangelogs -a
   dh_installman -a
   dh_perl -a
   dh_link -a
   jh_installlibs -a
   jh_classpath -a
   jh_manifest -a
   jh_depends -a
   dh_strip_nondeterminism -a
   dh_compress -a
   dh_fixperms -a
   dh_missing -a
   dh_dwz -a
dwz: debian/libnucleotidelikelihoodcore0/usr/lib/libNucleotideLikelihoodCore.so.0: .debug_info section not present
   dh_strip -a
   dh_makeshlibs -a
   dh_shlibdeps -a
   dh_installdeb -a
   dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package libnucleotidelikelihoodcore0: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: Depends field of package libnucleotidelikelihoodcore0: substitution variable ${shlibs:Depends} used, but is not defined
   dh_md5sums -a
   dh_builddeb -a
dpkg-deb: building package 'libnucleotidelikelihoodcore0' in '../libnucleotidelikelihoodcore0_1.10.4+dfsg-4_armhf.deb'.
dpkg-deb: building package 'libnucleotidelikelihoodcore0-dbgsym' in '../libnucleotidelikelihoodcore0-dbgsym_1.10.4+dfsg-4_armhf.deb'.
 dpkg-genbuildinfo --build=any -O../beast-mcmc_1.10.4+dfsg-4_armhf.buildinfo
 dpkg-genchanges --build=any -mRaspbian pi4 based autobuilder <root@raspbian.org> -O../beast-mcmc_1.10.4+dfsg-4_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2022-11-07T05:03:32Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


beast-mcmc_1.10.4+dfsg-4_armhf.changes:
---------------------------------------

Format: 1.8
Date: Tue, 01 Nov 2022 19:49:33 +0100
Source: beast-mcmc
Binary: libnucleotidelikelihoodcore0 libnucleotidelikelihoodcore0-dbgsym
Architecture: armhf
Version: 1.10.4+dfsg-4
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian pi4 based autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 libnucleotidelikelihoodcore0 - implementation of LikelihoodCore for nucleotides used by beast-mc
Changes:
 beast-mcmc (1.10.4+dfsg-4) unstable; urgency=medium
 .
   * Fix watch file
   * Standards-Version: 4.6.1 (routine-update)
Checksums-Sha1:
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 7d3ed6bda696808d42c3fa20ffc01e31738989e2 6656 libnucleotidelikelihoodcore0_1.10.4+dfsg-4_armhf.deb
Checksums-Sha256:
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 9dee02faf5f1febd77d11d7385ec49820a0b31619440cf28a189f1a3bbbe28ea 6656 libnucleotidelikelihoodcore0_1.10.4+dfsg-4_armhf.deb
Files:
 0f63c8bf6ab2157f32bd8b36357d5f07 12472 science optional beast-mcmc_1.10.4+dfsg-4_armhf.buildinfo
 a0395226cc85e5d55d7f4ea03b50f5b2 2216 debug optional libnucleotidelikelihoodcore0-dbgsym_1.10.4+dfsg-4_armhf.deb
 7678b560a9363f603e0e0745bf0b0d2a 6656 libs optional libnucleotidelikelihoodcore0_1.10.4+dfsg-4_armhf.deb

+------------------------------------------------------------------------------+
| Buildinfo                                                                    |
+------------------------------------------------------------------------------+

Format: 1.0
Source: beast-mcmc
Binary: libnucleotidelikelihoodcore0 libnucleotidelikelihoodcore0-dbgsym
Architecture: armhf
Version: 1.10.4+dfsg-4
Checksums-Md5:
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 7678b560a9363f603e0e0745bf0b0d2a 6656 libnucleotidelikelihoodcore0_1.10.4+dfsg-4_armhf.deb
Checksums-Sha1:
 4fdb66fa92b386ffc46eccf120248b15d77c0ec8 2216 libnucleotidelikelihoodcore0-dbgsym_1.10.4+dfsg-4_armhf.deb
 7d3ed6bda696808d42c3fa20ffc01e31738989e2 6656 libnucleotidelikelihoodcore0_1.10.4+dfsg-4_armhf.deb
Checksums-Sha256:
 be074ceb9a045fca86e1103ecc6c0321aa8cbf5fdfb1aa6c4c4eb55555151b41 2216 libnucleotidelikelihoodcore0-dbgsym_1.10.4+dfsg-4_armhf.deb
 9dee02faf5f1febd77d11d7385ec49820a0b31619440cf28a189f1a3bbbe28ea 6656 libnucleotidelikelihoodcore0_1.10.4+dfsg-4_armhf.deb
Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Mon, 07 Nov 2022 05:03:31 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
 adduser (= 3.129),
 ant (= 1.10.12-3),
 ant-optional (= 1.10.12-3),
 autoconf (= 2.71-2),
 automake (= 1:1.16.5-1.3),
 autopoint (= 0.21-9),
 autotools-dev (= 20220109.1),
 base-files (= 12.3+rpi1),
 base-passwd (= 3.6.1),
 bash (= 5.2~rc2-2),
 binutils (= 2.39-6+rpi1),
 binutils-arm-linux-gnueabihf (= 2.39-6+rpi1),
 binutils-common (= 2.39-6+rpi1),
 bsdextrautils (= 2.38.1-1.1),
 bsdutils (= 1:2.38.1-1.1),
 build-essential (= 12.9),
 bzip2 (= 1.0.8-5+b2),
 ca-certificates (= 20211016),
 ca-certificates-java (= 20220719),
 coreutils (= 9.1-1),
 cpp (= 4:12.2.0-1+rpi1),
 cpp-12 (= 12.2.0-3+rpi1),
 dash (= 0.5.11+git20210903+057cd650a4ed-9),
 dctrl-tools (= 2.24-3),
 debconf (= 1.5.79),
 debhelper (= 13.10.1),
 debianutils (= 5.7-0.3),
 default-jdk (= 2:1.11-72+b4),
 default-jdk-headless (= 2:1.11-72+b4),
 default-jre (= 2:1.11-72+b4),
 default-jre-headless (= 2:1.11-72+b4),
 devscripts (= 2.22.2),
 dh-autoreconf (= 20),
 dh-strip-nondeterminism (= 1.13.0-1),
 diffutils (= 1:3.8-1),
 dirmngr (= 2.2.39-1),
 dpkg (= 1.21.9+rpi1),
 dpkg-dev (= 1.21.9+rpi1),
 dwz (= 0.14+20220924-2),
 fakeroot (= 1.29-1),
 figtree (= 1.4.4-5),
 file (= 1:5.41-4),
 findutils (= 4.9.0-3),
 fontconfig (= 2.13.1-4.5),
 fontconfig-config (= 2.13.1-4.5),
 fonts-dejavu-core (= 2.37-2),
 g++ (= 4:12.2.0-1+rpi1),
 g++-12 (= 12.2.0-3+rpi1),
 gcc (= 4:12.2.0-1+rpi1),
 gcc-12 (= 12.2.0-3+rpi1),
 gcc-12-base (= 12.2.0-3+rpi1),
 gettext (= 0.21-9),
 gettext-base (= 0.21-9),
 gnupg (= 2.2.39-1),
 gnupg-l10n (= 2.2.39-1),
 gnupg-utils (= 2.2.39-1),
 gpg (= 2.2.39-1),
 gpg-agent (= 2.2.39-1),
 gpg-wks-client (= 2.2.39-1),
 gpg-wks-server (= 2.2.39-1),
 gpgconf (= 2.2.39-1),
 gpgsm (= 2.2.39-1),
 gpgv (= 2.2.39-1),
 grep (= 3.7-1),
 groff-base (= 1.22.4-8),
 gzip (= 1.12-1),
 hostname (= 3.23),
 init-system-helpers (= 1.64),
 intltool-debian (= 0.35.0+20060710.6),
 java-common (= 0.72),
 java-wrappers (= 0.3),
 javahelper (= 0.78),
 junit4 (= 4.13.2-3),
 libacl1 (= 2.3.1-1),
 libactivation-java (= 1.2.0-2),
 libapache-pom-java (= 25-2),
 libarchive-zip-perl (= 1.68-1),
 libasan8 (= 12.2.0-3+rpi1),
 libasound2 (= 1.2.7.2-1),
 libasound2-data (= 1.2.7.2-1),
 libassuan0 (= 2.5.5-4),
 libatomic1 (= 12.2.0-3+rpi1),
 libattr1 (= 1:2.5.1-1),
 libaudit-common (= 1:3.0.7-1.1),
 libaudit1 (= 1:3.0.7-1.1),
 libavahi-client3 (= 0.8-6+b1),
 libavahi-common-data (= 0.8-6+b1),
 libavahi-common3 (= 0.8-6+b1),
 libb-hooks-op-check-perl (= 0.22-2+b1),
 libbatik-java (= 1.16+dfsg-1),
 libbinutils (= 2.39-6+rpi1),
 libblas3 (= 3.10.1-2),
 libblkid1 (= 2.38.1-1.1),
 libbrotli1 (= 1.0.9-2+b2),
 libbsd0 (= 0.11.7-1),
 libbz2-1.0 (= 1.0.8-5+b2),
 libc-bin (= 2.35-2+rpi1),
 libc-dev-bin (= 2.35-2+rpi1),
 libc6 (= 2.35-2+rpi1),
 libc6-dev (= 2.35-2+rpi1),
 libcairo2 (= 1.16.0-6),
 libcap-ng0 (= 0.8.3-1),
 libcap2 (= 1:2.44-1),
 libcc1-0 (= 12.2.0-3+rpi1),
 libclang-common-14-dev (= 1:14.0.6-2+rpi1),
 libclang-cpp14 (= 1:14.0.6-2+rpi1),
 libclass-method-modifiers-perl (= 2.13-2),
 libclass-xsaccessor-perl (= 1.19-4+b1),
 libclc-14 (= 1:14.0.6-2+rpi1),
 libclc-14-dev (= 1:14.0.6-2+rpi1),
 libcolt-free-java (= 1.2.0+dfsg-7),
 libcom-err2 (= 1.46.6~rc1-1),
 libcommons-cli-java (= 1.4-2),
 libcommons-codec-java (= 1.15-1),
 libcommons-io-java (= 2.11.0-2),
 libcommons-logging-java (= 1.2-3),
 libcommons-math-java (= 2.2-8),
 libcommons-parent-java (= 43-1),
 libconcurrent-java (= 1.3.4-4.1),
 libcrypt-dev (= 1:4.4.28-2),
 libcrypt1 (= 1:4.4.28-2),
 libctf-nobfd0 (= 2.39-6+rpi1),
 libctf0 (= 2.39-6+rpi1),
 libcups2 (= 2.4.2-1+b1),
 libcurl4 (= 7.85.0-1),
 libdatrie1 (= 0.2.13-2+b2),
 libdb5.3 (= 5.3.28+dfsg1-0.10),
 libdbus-1-3 (= 1.14.4-1),
 libdebconfclient0 (= 0.264),
 libdebhelper-perl (= 13.10.1),
 libdeflate0 (= 1.14-1),
 libdevel-callchecker-perl (= 0.008-1+b4),
 libdpkg-perl (= 1.21.9+rpi1),
 libdrm-amdgpu1 (= 2.4.113-2+rpi1),
 libdrm-common (= 2.4.113-2+rpi1),
 libdrm-nouveau2 (= 2.4.113-2+rpi1),
 libdrm-radeon1 (= 2.4.113-2+rpi1),
 libdrm2 (= 2.4.113-2+rpi1),
 libdynaloader-functions-perl (= 0.003-3),
 libedit2 (= 3.1-20221009-1),
 libejml-java (= 0.39+ds-1),
 libelf1 (= 0.187-2+rpi2),
 libencode-locale-perl (= 1.05-3),
 libexpat1 (= 2.5.0-1),
 libf2j-java (= 0.8.1+dfsg-5),
 libfakeroot (= 1.29-1),
 libffi8 (= 3.4.2-4),
 libfile-dirlist-perl (= 0.05-3),
 libfile-homedir-perl (= 1.006-1),
 libfile-listing-perl (= 6.15-1),
 libfile-stripnondeterminism-perl (= 1.13.0-1),
 libfile-touch-perl (= 0.12-2),
 libfile-which-perl (= 1.27-2),
 libfontconfig1 (= 2.13.1-4.5),
 libfreetype6 (= 2.12.1+dfsg-3),
 libfribidi0 (= 1.0.8-2.1),
 libgcc-12-dev (= 12.2.0-3+rpi1),
 libgcc-s1 (= 12.2.0-3+rpi1),
 libgcrypt20 (= 1.10.1-2+b2),
 libgdbm-compat4 (= 1.23-3),
 libgdbm6 (= 1.23-3),
 libgfortran5 (= 12.2.0-3+rpi1),
 libgif7 (= 5.2.1-2.5),
 libgl1 (= 1.5.0-1),
 libgl1-mesa-dri (= 22.2.0-1+rpi1),
 libglapi-mesa (= 22.2.0-1+rpi1),
 libglib2.0-0 (= 2.74.1-1),
 libglvnd0 (= 1.5.0-1),
 libglx-mesa0 (= 22.2.0-1+rpi1),
 libglx0 (= 1.5.0-1),
 libgmp10 (= 2:6.2.1+dfsg1-1.1),
 libgnutls30 (= 3.7.8-2),
 libgomp1 (= 12.2.0-3+rpi1),
 libgpg-error0 (= 1.45-2),
 libgraphite2-3 (= 1.3.14-1),
 libgssapi-krb5-2 (= 1.20-1),
 libhamcrest-java (= 2.2-1),
 libharfbuzz0b (= 5.2.0-2),
 libhmsbeagle-java (= 3.1.2+dfsg-12),
 libhmsbeagle1v5 (= 3.1.2+dfsg-12),
 libhogweed6 (= 3.8.1-2),
 libhtml-parser-perl (= 3.79-1+b1),
 libhtml-tagset-perl (= 3.20-6),
 libhtml-tree-perl (= 5.07-2),
 libhttp-cookies-perl (= 6.10-1),
 libhttp-date-perl (= 6.05-2),
 libhttp-message-perl (= 6.41-1),
 libhttp-negotiate-perl (= 6.01-1),
 libice6 (= 2:1.0.10-1),
 libicu71 (= 71.1-3),
 libidn2-0 (= 2.3.3-1),
 libimport-into-perl (= 1.002005-2),
 libio-html-perl (= 1.004-3),
 libio-pty-perl (= 1:1.15-2+b2),
 libio-socket-ssl-perl (= 2.075-1),
 libipc-run-perl (= 20220807.0-1),
 libisl23 (= 0.25-1),
 libitext1-java (= 1.4-7),
 libitext5-java (= 5.5.13.3-1),
 libjam-java (= 0.1.git20180106.740247a+dfsg-1),
 libjaxen-java (= 1.1.6-4),
 libjaxp1.3-java (= 1.3.05-6),
 libjbig0 (= 2.1-3.1+b2),
 libjdom1-java (= 1.1.3-2.1),
 libjebl2-java (= 0.1+git20201011.969bd4b-1),
 libjlapack-java (= 0.8~dfsg-5),
 libjpeg62-turbo (= 1:2.1.2-1),
 libk5crypto3 (= 1.20-1),
 libkeyutils1 (= 1.6.3-1),
 libkrb5-3 (= 1.20-1),
 libkrb5support0 (= 1.20-1),
 libksba8 (= 1.6.0-3),
 liblapack3 (= 3.10.1-2),
 liblcms2-2 (= 2.13.1-1),
 libldap-2.5-0 (= 2.5.13+dfsg-2+rpi1),
 liblerc4 (= 4.0.0+ds-2),
 libllvm14 (= 1:14.0.6-2+rpi1),
 liblog4j1.2-java (= 1.2.17-11),
 liblwp-mediatypes-perl (= 6.04-1),
 liblwp-protocol-https-perl (= 6.10-1),
 liblz4-1 (= 1.9.4-1+rpi1),
 liblzma5 (= 5.2.5-2.1),
 libmagic-mgc (= 1:5.41-4),
 libmagic1 (= 1:5.41-4),
 libmd0 (= 1.0.4-2),
 libmodule-runtime-perl (= 0.016-2),
 libmoo-perl (= 2.005004-3),
 libmount1 (= 2.38.1-1.1),
 libmpc3 (= 1.2.1-2),
 libmpdec3 (= 2.5.1-2+rpi1),
 libmpfr6 (= 4.1.0-3),
 libmpj-java (= 0.44+dfsg-4),
 libmtj-java (= 0.9.14+dfsg-7),
 libncursesw6 (= 6.3+20220423-2),
 libnet-http-perl (= 6.22-1),
 libnet-ssleay-perl (= 1.92-2+b2),
 libnettle8 (= 3.8.1-2),
 libnghttp2-14 (= 1.50.0-1),
 libnpth0 (= 1.6-3),
 libnsl-dev (= 1.3.0-2),
 libnsl2 (= 1.3.0-2),
 libnspr4 (= 2:4.35-1),
 libnss3 (= 2:3.83-1),
 liboptions-java (= 0.0.20120113-3),
 libp11-kit0 (= 0.24.1-1),
 libpam-modules (= 1.5.2-5),
 libpam-modules-bin (= 1.5.2-5),
 libpam-runtime (= 1.5.2-5),
 libpam0g (= 1.5.2-5),
 libpango-1.0-0 (= 1.50.10+ds-1),
 libpangocairo-1.0-0 (= 1.50.10+ds-1),
 libpangoft2-1.0-0 (= 1.50.10+ds-1),
 libpaper-utils (= 1.1.28),
 libpaper1 (= 1.1.28),
 libparams-classify-perl (= 0.015-2+b1),
 libpcre2-8-0 (= 10.40-1+b2),
 libpcre3 (= 2:8.39-14),
 libpcsclite1 (= 1.9.9-1),
 libperl5.36 (= 5.36.0-4),
 libpipeline1 (= 1.5.6-3),
 libpixman-1-0 (= 0.40.0-1),
 libpng16-16 (= 1.6.38-2),
 libpsl5 (= 0.21.0-1.2),
 libpython3-stdlib (= 3.10.6-1),
 libpython3.10-minimal (= 3.10.8-1),
 libpython3.10-stdlib (= 3.10.8-1),
 libreadline8 (= 8.2-1),
 libregexp-ipv6-perl (= 0.03-3),
 librole-tiny-perl (= 2.002004-1),
 librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2),
 libsasl2-2 (= 2.1.28+dfsg-8),
 libsasl2-modules-db (= 2.1.28+dfsg-8),
 libseccomp2 (= 2.5.4-1+rpi1),
 libselinux1 (= 3.4-1),
 libsemanage-common (= 3.4-1),
 libsemanage2 (= 3.4-1),
 libsensors-config (= 1:3.6.0-7.1),
 libsensors5 (= 1:3.6.0-7.1),
 libsepol2 (= 3.4-2),
 libsm6 (= 2:1.2.3-1),
 libsmartcols1 (= 2.38.1-1.1),
 libsqlite3-0 (= 3.39.4-1),
 libssh2-1 (= 1.10.0-3+b1),
 libssl3 (= 3.0.7-1),
 libstdc++-12-dev (= 12.2.0-3+rpi1),
 libstdc++6 (= 12.2.0-3+rpi1),
 libsub-override-perl (= 0.09-4),
 libsub-quote-perl (= 2.006006-1),
 libsystemd0 (= 251.5-1+rpi1),
 libtasn1-6 (= 4.19.0-2),
 libtcl8.6 (= 8.6.12+dfsg-1),
 libthai-data (= 0.1.29-1),
 libthai0 (= 0.1.29-1),
 libtiff5 (= 4.4.0-5),
 libtimedate-perl (= 2.3300-2),
 libtinfo5 (= 6.3+20220423-2),
 libtinfo6 (= 6.3+20220423-2),
 libtirpc-common (= 1.3.3+ds-1),
 libtirpc-dev (= 1.3.3+ds-1),
 libtirpc3 (= 1.3.3+ds-1),
 libtk8.6 (= 8.6.12-1),
 libtool (= 2.4.7-4),
 libtry-tiny-perl (= 0.31-2),
 libubsan1 (= 12.2.0-3+rpi1),
 libuchardet0 (= 0.0.7-1),
 libudev1 (= 251.5-1+rpi1),
 libunistring2 (= 1.0-2),
 liburi-perl (= 5.16-1),
 libuuid1 (= 2.38.1-1.1),
 libwebp7 (= 1.2.2-2),
 libwww-perl (= 6.67-1),
 libwww-robotrules-perl (= 6.02-1),
 libx11-6 (= 2:1.8.1-2),
 libx11-data (= 2:1.8.1-2),
 libx11-xcb1 (= 2:1.8.1-2),
 libxau6 (= 1:1.0.9-1),
 libxcb-dri2-0 (= 1.15-1),
 libxcb-dri3-0 (= 1.15-1),
 libxcb-glx0 (= 1.15-1),
 libxcb-present0 (= 1.15-1),
 libxcb-render0 (= 1.15-1),
 libxcb-shm0 (= 1.15-1),
 libxcb-sync1 (= 1.15-1),
 libxcb-xfixes0 (= 1.15-1),
 libxcb1 (= 1.15-1),
 libxdmcp6 (= 1:1.1.2-3),
 libxext6 (= 2:1.3.4-1),
 libxfixes3 (= 1:6.0.0-2),
 libxft2 (= 2.3.6-1),
 libxi6 (= 2:1.8-1),
 libxml-commons-external-java (= 1.4.01-5),
 libxml2 (= 2.9.14+dfsg-1),
 libxmlgraphics-commons-java (= 2.6-1),
 libxrender1 (= 1:0.9.10-1.1),
 libxshmfence1 (= 1.3-1),
 libxss1 (= 1:1.2.3-1),
 libxt6 (= 1:1.2.1-1),
 libxtst6 (= 2:1.2.3-1.1),
 libxxf86vm1 (= 1:1.1.4-1+b2),
 libz3-4 (= 4.8.12-1),
 libzstd1 (= 1.5.2+dfsg-1),
 linux-libc-dev (= 5.19.6-1+rpi1),
 login (= 1:4.12.3+dfsg1-1),
 lsb-base (= 11.4+rpi1),
 m4 (= 1.4.19-1),
 make (= 4.3-4.1),
 man-db (= 2.11.0-1),
 mawk (= 1.3.4.20200120-3.1),
 media-types (= 8.0.0),
 mesa-opencl-icd (= 22.2.0-1+rpi1),
 ncurses-base (= 6.3+20220423-2),
 ncurses-bin (= 6.3+20220423-2),
 netbase (= 6.4),
 ocl-icd-libopencl1 (= 2.3.1-1),
 openjdk-11-jdk (= 11.0.16+8-1),
 openjdk-11-jdk-headless (= 11.0.16+8-1),
 openjdk-11-jre (= 11.0.16+8-1),
 openjdk-11-jre-headless (= 11.0.16+8-1),
 openssl (= 3.0.7-1),
 passwd (= 1:4.12.3+dfsg1-1),
 patch (= 2.7.6-7),
 patchutils (= 0.4.2-1),
 perl (= 5.36.0-4),
 perl-base (= 5.36.0-4),
 perl-modules-5.36 (= 5.36.0-4),
 perl-openssl-defaults (= 7+b1),
 pinentry-curses (= 1.2.0-2),
 po-debconf (= 1.0.21+nmu1),
 python3 (= 3.10.6-1),
 python3-minimal (= 3.10.6-1),
 python3.10 (= 3.10.8-1),
 python3.10-minimal (= 3.10.8-1),
 r-base-core (= 4.2.1-3),
 r-cran-rjava (= 1.0-6-1),
 readline-common (= 8.2-1),
 rpcsvc-proto (= 1.4.2-4),
 sed (= 4.8-1),
 sensible-utils (= 0.0.17),
 sgml-base (= 1.31),
 sysvinit-utils (= 3.05-6),
 tar (= 1.34+dfsg-1),
 tzdata (= 2022d-1),
 ucf (= 3.0043),
 unzip (= 6.0-27),
 util-linux (= 2.38.1-1.1),
 util-linux-extra (= 2.38.1-1.1),
 wdiff (= 1.2.2-2),
 x11-common (= 1:7.7+23),
 xdg-utils (= 1.1.3-4.1),
 xz-utils (= 5.2.5-2.1),
 zip (= 3.0-12),
 zlib1g (= 1:1.2.11.dfsg-4.1)
Environment:
 DEB_BUILD_OPTIONS="parallel=4"
 LANG="en_GB.UTF-8"
 LC_ALL="C.UTF-8"
 SOURCE_DATE_EPOCH="1667328573"


+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


libnucleotidelikelihoodcore0-dbgsym_1.10.4+dfsg-4_armhf.deb
-----------------------------------------------------------

 new Debian package, version 2.0.
 size 2216 bytes: control archive=564 bytes.
     447 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: libnucleotidelikelihoodcore0-dbgsym
 Source: beast-mcmc
 Version: 1.10.4+dfsg-4
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 14
 Depends: libnucleotidelikelihoodcore0 (= 1.10.4+dfsg-4)
 Section: debug
 Priority: optional
 Description: debug symbols for libnucleotidelikelihoodcore0
 Build-Ids: 39bf768b6f7d5b1e5a3eb8201eed9f2d7fb8f25b

drwxr-xr-x root/root         0 2022-11-01 18:49 ./
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/lib/
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/lib/debug/
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/lib/debug/.build-id/39/
-rw-r--r-- root/root      3528 2022-11-01 18:49 ./usr/lib/debug/.build-id/39/bf768b6f7d5b1e5a3eb8201eed9f2d7fb8f25b.debug
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/share/
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/share/doc/
lrwxrwxrwx root/root         0 2022-11-01 18:49 ./usr/share/doc/libnucleotidelikelihoodcore0-dbgsym -> libnucleotidelikelihoodcore0


libnucleotidelikelihoodcore0_1.10.4+dfsg-4_armhf.deb
----------------------------------------------------

 new Debian package, version 2.0.
 size 6656 bytes: control archive=1160 bytes.
    1190 bytes,    25 lines      control              
     259 bytes,     3 lines      md5sums              
      76 bytes,     1 lines      shlibs               
      68 bytes,     2 lines      triggers             
 Package: libnucleotidelikelihoodcore0
 Source: beast-mcmc
 Version: 1.10.4+dfsg-4
 Architecture: armhf
 Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
 Installed-Size: 79
 Conflicts: beast-mcmc-lib
 Replaces: beast-mcmc-lib
 Provides: beast-mcmc-lib
 Section: libs
 Priority: optional
 Homepage: http://beast.bio.ed.ac.uk/
 Description: implementation of LikelihoodCore for nucleotides used by beast-mcmc
  BEAST is a cross-platform program for Bayesian MCMC analysis of molecular
  sequences. It is entirely orientated towards rooted, time-measured
  phylogenies inferred using strict or relaxed molecular clock models. It
  can be used as a method of reconstructing phylogenies but is also a
  framework for testing evolutionary hypotheses without conditioning on a
  single tree topology. BEAST uses MCMC to average over tree space, so that
  each tree is weighted proportional to its posterior probability. Included
  is a simple to use user-interface program for setting up standard
  analyses and a suit of programs for analysing the results.
  .
  This package provides an implementation of LikelihoodCore for nucleotides
  that calls native methods for maximum speed.

drwxr-xr-x root/root         0 2022-11-01 18:49 ./
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/lib/
-rw-r--r-- root/root     66748 2022-11-01 18:49 ./usr/lib/libNucleotideLikelihoodCore.so.0
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/share/
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/share/doc/
drwxr-xr-x root/root         0 2022-11-01 18:49 ./usr/share/doc/libnucleotidelikelihoodcore0/
-rw-r--r-- root/root       612 2022-11-01 18:49 ./usr/share/doc/libnucleotidelikelihoodcore0/changelog.Debian.gz
-rw-r--r-- root/root      2367 2022-11-01 18:49 ./usr/share/doc/libnucleotidelikelihoodcore0/copyright


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build Type: any
Build-Space: 100208
Build-Time: 132
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 1352
Job: beast-mcmc_1.10.4+dfsg-4
Machine Architecture: armhf
Package: beast-mcmc
Package-Time: 1520
Source-Version: 1.10.4+dfsg-4
Space: 100208
Status: successful
Version: 1.10.4+dfsg-4
--------------------------------------------------------------------------------
Finished at 2022-11-07T05:03:32Z
Build needed 00:25:20, 100208k disk space
Raspbian Package Auto-Building

Build log for beast-mcmc (1.10.4+dfsg-4) on armhf
