baitfisher →
1.0+dfsg-2 →
armhf → 2018-03-18 17:18:21
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02
+==============================================================================+
| baitfisher 1.0+dfsg-2 (armhf) Sun, 18 Mar 2018 17:16:22 +0000 |
+==============================================================================+
Package: baitfisher
Version: 1.0+dfsg-2
Source Version: 1.0+dfsg-2
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-8a7d0f83-090c-49f6-b396-acffd96730ed' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [10.6 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [12.4 MB]
Fetched 23.1 MB in 9s (2575 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'baitfisher' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/debian-med/baitfisher.git
Please use:
git clone https://anonscm.debian.org/debian-med/baitfisher.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 229 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main baitfisher 1.0+dfsg-2 (dsc) [1974 B]
Get:2 http://172.17.0.1/private buster-staging/main baitfisher 1.0+dfsg-2 (tar) [223 kB]
Get:3 http://172.17.0.1/private buster-staging/main baitfisher 1.0+dfsg-2 (diff) [3968 B]
Fetched 229 kB in 0s (1814 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/baitfisher-ABcY4w/baitfisher-1.0+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/baitfisher-ABcY4w' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-fHJunC/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-fHJunC/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-fHJunC/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ Packages [431 B]
Fetched 2107 B in 0s (8346 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (57.1 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15650 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 10), help2man
Filtered Build-Depends: debhelper (>= 10), help2man
dpkg-deb: building package 'sbuild-build-depends-baitfisher-dummy' in '/<<BUILDDIR>>/resolver-fHJunC/apt_archive/sbuild-build-depends-baitfisher-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-baitfisher-dummy sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ Sources [495 B]
Get:5 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ Packages [577 B]
Fetched 2405 B in 0s (9721 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install baitfisher build dependencies (apt-based resolver)
----------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates dbus dbus-user-session e2fsprogs-l10n libexpat1
libnss-systemd libpam-systemd libsasl2-modules libssl1.1 openssl
systemd-sysv
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
help2man intltool-debian libarchive-zip-perl libbsd0 libcroco3
libfile-stripnondeterminism-perl libglib2.0-0 libicu57
liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2
libtimedate-perl libtool libxml2 m4 man-db po-debconf
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev groff
libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less
www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base
help2man intltool-debian libarchive-zip-perl libbsd0 libcroco3
libfile-stripnondeterminism-perl libglib2.0-0 libicu57
liblocale-gettext-perl libmagic-mgc libmagic1 libpipeline1 libsigsegv2
libtimedate-perl libtool libxml2 m4 man-db po-debconf
sbuild-build-depends-baitfisher-dummy
0 upgraded, 32 newly installed, 0 to remove and 0 not upgraded.
Need to get 7695 kB/19.0 MB of archives.
After this operation, 64.1 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-fHJunC/apt_archive ./ sbuild-build-depends-baitfisher-dummy 0.invalid.0 [860 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf liblocale-gettext-perl armhf 1.07-3+b2 [18.3 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.3-10 [1005 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-1 [24.6 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.2-1 [1145 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-4 [117 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-1 [32.2 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-1 [185 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.15.1-3 [736 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-4 [434 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-2 [545 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 16 [16.3 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.60-1 [95.6 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 0.040-1 [18.4 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libtimedate-perl all 2.3000-2 [42.2 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 0.040-1 [11.8 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-4 [1218 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.20 [247 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf debhelper all 11.1.5 [1007 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf help2man armhf 1.47.6 [169 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package liblocale-gettext-perl.
(Reading database ... 15650 files and directories currently installed.)
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Setting up libarchive-zip-perl (1.60-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up libsigsegv2:armhf (2.12-1) ...
Setting up groff-base (1.22.3-10) ...
Setting up libglib2.0-0:armhf (2.54.3-2) ...
No schema files found: removed existing output file.
Setting up gettext-base (0.19.8.1-4) ...
Setting up libpipeline1:armhf (1.5.0-1) ...
Setting up m4 (1.4.18-1) ...
Setting up libicu57:armhf (57.1-9) ...
Setting up libbsd0:armhf (0.8.7-1) ...
Setting up libxml2:armhf (2.9.4+dfsg1-6.1) ...
Setting up libmagic-mgc (1:5.32-2) ...
Setting up libmagic1:armhf (1:5.32-2) ...
Setting up libcroco3:armhf (0.6.12-2) ...
Processing triggers for libc-bin (2.27-2+rpi1) ...
Setting up autotools-dev (20180224.1) ...
Setting up liblocale-gettext-perl (1.07-3+b2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up autopoint (0.19.8.1-4) ...
Setting up libfile-stripnondeterminism-perl (0.040-1) ...
Setting up gettext (0.19.8.1-4) ...
Setting up autoconf (2.69-11) ...
Setting up file (1:5.32-2) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up automake (1:1.15.1-3) ...
update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode
Setting up help2man (1.47.6) ...
Setting up man-db (2.8.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libtool (2.4.6-2) ...
Setting up po-debconf (1.0.20) ...
Setting up dh-autoreconf (16) ...
Setting up dh-strip-nondeterminism (0.040-1) ...
Setting up debhelper (11.1.5) ...
Setting up sbuild-build-depends-baitfisher-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.27-2+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.4.0-79-generic armhf (armv8l)
Toolchain package versions: binutils_2.30-7+rpi1 dpkg-dev_1.19.0.5 g++-7_7.3.0-11 gcc-7_7.3.0-11 libc6-dev_2.27-2+rpi1 libstdc++-7-dev_7.3.0-11 libstdc++6_8-20180218-1+rpi1 linux-libc-dev_4.15.4-1+rpi1
Package versions: adduser_3.117 apt_1.6~beta1 autoconf_2.69-11 automake_1:1.15.1-3 autopoint_0.19.8.1-4 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.44 bash_4.4.18-1.1 binutils_2.30-7+rpi1 binutils-arm-linux-gnueabihf_2.30-7+rpi1 binutils-common_2.30-7+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.4 build-essential_12.4 bzip2_1.0.6-8.1 ca-certificates_20170717 coreutils_8.28-1 cpio_2.12+dfsg-6 cpp_4:7.2.0-1d1 cpp-7_7.3.0-11 dash_0.5.8-2.10 dbus_1.12.6-2 dbus-user-session_1.12.6-2 debconf_1.5.66 debhelper_11.1.5 debianutils_4.8.4 dh-autoreconf_16 dh-strip-nondeterminism_0.040-1 diffutils_1:3.6-1 dirmngr_2.2.5-1 dmsetup_2:1.02.145-4.1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.0-1 e2fsprogs_1.44.0-1 e2fsprogs-l10n_1.44.0-1 fakeroot_1.22-2 fdisk_2.31.1-0.4 file_1:5.32-2 findutils_4.6.0+git+20170828-2 g++_4:7.2.0-1d1 g++-7_7.3.0-11 gcc_4:7.2.0-1d1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1 gcc-5-base_5.5.0-8 gcc-7_7.3.0-11 gcc-7-base_7.3.0-11 gcc-8-base_8-20180218-1+rpi1 gettext_0.19.8.1-4 gettext-base_0.19.8.1-4 gnupg_2.2.5-1 gnupg-agent_2.2.5-1 gnupg-l10n_2.2.5-1 gnupg-utils_2.2.5-1 gpg_2.2.5-1 gpg-agent_2.2.5-1 gpg-wks-client_2.2.5-1 gpg-wks-server_2.2.5-1 gpgconf_2.2.5-1 gpgsm_2.2.5-1 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5 help2man_1.47.6 hostname_3.20 init-system-helpers_1.51 initramfs-tools_0.130 initramfs-tools-core_0.130 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-11+rpi1 kmod_25-1 libacl1_2.2.52-3 libapparmor1_2.12-3 libapt-pkg5.0_1.6~beta1 libarchive-zip-perl_1.60-1 libargon2-0_0~20161029-1.1 libasan4_7.3.0-11 libassuan0_2.5.1-2 libatomic1_8-20180218-1+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.2-1 libaudit1_1:2.8.2-1 libbinutils_2.30-7+rpi1 libblkid1_2.31.1-0.4 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-2+rpi1 libc-dev-bin_2.27-2+rpi1 libc6_2.27-2+rpi1 libc6-dev_2.27-2+rpi1 libcap-ng0_0.7.7-3.1+b1 libcap2_1:2.25-1.2 libcc1-0_8-20180218-1+rpi1 libcilkrts5_7.3.0-11 libcom-err2_1.44.0-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.1-1 libcryptsetup4_2:1.7.5-1 libdb5.3_5.3.28-13.1 libdbus-1-3_1.12.6-2 libdebconfclient0_0.241 libdevmapper1.02.1_2:1.02.145-4.1 libdpkg-perl_1.19.0.5 libdrm-common_2.4.90-1+rpi1 libdrm2_2.4.90-1+rpi1 libexpat1_2.2.5-3 libext2fs2_1.44.0-1 libfakeroot_1.22-2 libfdisk1_2.31.1-0.4 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.040-1 libgcc-7-dev_7.3.0-11 libgcc1_1:8-20180218-1+rpi1 libgcrypt20_1.8.1-4 libgdbm-compat4_1.14.1-4 libgdbm3_1.8.3-14 libgdbm5_1.14.1-4 libglib2.0-0_2.54.3-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8-20180218-1+rpi1 libgpg-error0_1.27-6 libhogweed4_3.4-1 libicu57_57.1-9 libidn11_1.33-2.1 libidn2-0_2.0.4-1.1 libip4tc0_1.6.2-1 libisl15_0.18-1 libjson-c3_0.12.1-1.3 libklibc_2.0.4-11+rpi1 libkmod2_25-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 liblocale-gettext-perl_1.07-3+b2 liblz4-1_0.0~r131-2 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.32-2 libmagic1_1:5.32-2 libmount1_2.31.1-0.4 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1-1 libncursesw5_6.1-1 libnettle6_3.4-1 libnpth0_1.5-3 libnss-systemd_238-2 libp11-kit0_0.23.9-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam-systemd_238-2 libpam0g_1.1.8-3.7 libpcre3_2:8.39-9 libperl5.24_5.24.1-7 libperl5.26_5.26.1-5 libpipeline1_1.5.0-1 libplymouth4_0.9.3-2 libpng16-16_1.6.34-1 libprocps6_2:3.3.12-4 libreadline7_7.0-3 libsasl2-2_2.1.27~101-g0780600+dfsg-3 libsasl2-modules_2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3 libseccomp2_2.3.1-2.1 libselinux1_2.7-2 libsemanage-common_2.7-2 libsemanage1_2.7-2 libsepol1_2.7-1 libsigsegv2_2.12-1 libsmartcols1_2.31.1-0.4 libsqlite3-0_3.22.0-1 libss2_1.44.0-1 libssl1.1_1.1.0g-2 libstdc++-7-dev_7.3.0-11 libstdc++6_8-20180218-1+rpi1 libsystemd0_238-2 libtasn1-6_4.13-2 libtimedate-perl_2.3000-2 libtinfo5_6.1-1 libtool_2.4.6-2 libubsan0_7.3.0-11 libudev1_238-2 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.4 libxml2_2.9.4+dfsg1-6.1 linux-base_4.5 linux-libc-dev_4.15.4-1+rpi1 login_1:4.5-1 lsb-base_9.20170808+rpi1 m4_1.4.18-1 make_4.1-9.1 makedev_2.3.1-93 man-db_2.8.2-1 mawk_1.3.3-17 mount_2.31.1-0.4 multiarch-support_2.27-2+rpi1 nano_2.9.4-1 ncurses-base_6.1-1 ncurses-bin_6.1-1 openssl_1.1.0g-2 passwd_1:4.5-1 patch_2.7.6-1 perl_5.26.1-5 perl-base_5.26.1-5 perl-modules-5.24_5.24.1-7 perl-modules-5.26_5.26.1-5 pinentry-curses_1.1.0-1 plymouth_0.9.3-2 po-debconf_1.0.20 procps_2:3.3.12-4 raspbian-archive-keyring_20120528.2 readline-common_7.0-3 sbuild-build-depends-baitfisher-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 systemd_238-2 systemd-sysv_238-2 sysvinit-utils_2.88dsf-59.10 tar_1.29b-2 tzdata_2018c-1 udev_238-2 util-linux_2.31.1-0.4 xz-utils_5.2.2-1.3 zlib1g_1:1.2.8.dfsg-5
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Wed Sep 6 09:55:36 2017 UTC
gpgv: using RSA key 578A0494D1C646D1
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./baitfisher_1.0+dfsg-2.dsc
dpkg-source: info: extracting baitfisher in /<<BUILDDIR>>/baitfisher-1.0+dfsg
dpkg-source: info: unpacking baitfisher_1.0+dfsg.orig.tar.xz
dpkg-source: info: unpacking baitfisher_1.0+dfsg-2.debian.tar.xz
dpkg-source: info: applying adapt_examples.patch
dpkg-source: info: applying fix_gcc6.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-8a7d0f83-090c-49f6-b396-acffd96730ed
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package baitfisher
dpkg-buildpackage: info: source version 1.0+dfsg-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build baitfisher-1.0+dfsg
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_auto_clean
make -j4 -O clean
make[1]: Entering directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
rm -f *.o
rm -f BaitFisher-v1.2.7
rm -f BaitFilter-v1.0.5
make[1]: Leaving directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
dh_auto_build -a
make -j4 -O
make[1]: Entering directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
g++ -I . -O3 -c mydir-unix.cpp -o mydir-unix.o
make[1]: Leaving directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
make[1]: Entering directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
g++ -I . -O3 -c bait-fisher.cpp -o bait-fisher.o
In file included from GFF-class.h:32:0,
from bait-fisher.cpp:30:
range_functions.h: In member function 'bool CRangeList::add(faststring)':
range_functions.h:596:31: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos1,' ');
^
In file included from bait-fisher.cpp:28:0:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
In file included from GFF-class.h:32:0,
from bait-fisher.cpp:30:
range_functions.h:599:37: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
c1 = str.ToUnsigned(pos1, pos2);
^
In file included from bait-fisher.cpp:28:0:
faststring2.h:1683:13: note: initializing argument 2 of 'unsigned int faststring::ToUnsigned(faststring::size_t, faststring::size_t&)'
unsigned ToUnsigned(size_t beg_pos,
^~~~~~~~~~
In file included from GFF-class.h:32:0,
from bait-fisher.cpp:30:
range_functions.h:605:31: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos2,' ');
^
In file included from bait-fisher.cpp:28:0:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
In file included from GFF-class.h:32:0,
from bait-fisher.cpp:30:
range_functions.h:614:26: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos1,' ');
^
In file included from bait-fisher.cpp:28:0:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
In file included from GFF-class.h:32:0,
from bait-fisher.cpp:30:
range_functions.h:617:32: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
c2 = str.ToUnsigned(pos1, pos2);
^
In file included from bait-fisher.cpp:28:0:
faststring2.h:1683:13: note: initializing argument 2 of 'unsigned int faststring::ToUnsigned(faststring::size_t, faststring::size_t&)'
unsigned ToUnsigned(size_t beg_pos,
^~~~~~~~~~
In file included from GFF-class.h:32:0,
from bait-fisher.cpp:30:
range_functions.h:624:26: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos2,' ');
^
In file included from bait-fisher.cpp:28:0:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
In file included from GFF-class.h:32:0,
from bait-fisher.cpp:30:
range_functions.h:634:28: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos2,' ');
^
In file included from bait-fisher.cpp:28:0:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
In file included from GFF-class.h:32:0,
from bait-fisher.cpp:30:
range_functions.h:656:26: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos1,' ');
^
In file included from bait-fisher.cpp:28:0:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
makefile:8: recipe for target 'bait-fisher.o' failed
make[1]: *** [bait-fisher.o] Error 1
make[1]: Leaving directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
make[1]: *** Waiting for unfinished jobs....
make[1]: Entering directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
g++ -I . -O3 -c bait-fisher-helper.cpp -o bait-fisher-helper.o
make[1]: Leaving directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
make[1]: Entering directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
g++ -I . -O3 -c bait-filter.cpp -o bait-filter.o
In file included from CBlastParser.h:47:0,
from CBaitRecord.h:34,
from bait-filter.cpp:30:
range_functions.h: In member function 'bool CRangeList::add(faststring)':
range_functions.h:596:31: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos1,' ');
^
In file included from global-types-and-parameters.h:35:0,
from bait-filter.cpp:29:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
In file included from CBlastParser.h:47:0,
from CBaitRecord.h:34,
from bait-filter.cpp:30:
range_functions.h:599:37: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
c1 = str.ToUnsigned(pos1, pos2);
^
In file included from global-types-and-parameters.h:35:0,
from bait-filter.cpp:29:
faststring2.h:1683:13: note: initializing argument 2 of 'unsigned int faststring::ToUnsigned(faststring::size_t, faststring::size_t&)'
unsigned ToUnsigned(size_t beg_pos,
^~~~~~~~~~
In file included from CBlastParser.h:47:0,
from CBaitRecord.h:34,
from bait-filter.cpp:30:
range_functions.h:605:31: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos2,' ');
^
In file included from global-types-and-parameters.h:35:0,
from bait-filter.cpp:29:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
In file included from CBlastParser.h:47:0,
from CBaitRecord.h:34,
from bait-filter.cpp:30:
range_functions.h:614:26: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos1,' ');
^
In file included from global-types-and-parameters.h:35:0,
from bait-filter.cpp:29:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
In file included from CBlastParser.h:47:0,
from CBaitRecord.h:34,
from bait-filter.cpp:30:
range_functions.h:617:32: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
c2 = str.ToUnsigned(pos1, pos2);
^
In file included from global-types-and-parameters.h:35:0,
from bait-filter.cpp:29:
faststring2.h:1683:13: note: initializing argument 2 of 'unsigned int faststring::ToUnsigned(faststring::size_t, faststring::size_t&)'
unsigned ToUnsigned(size_t beg_pos,
^~~~~~~~~~
In file included from CBlastParser.h:47:0,
from CBaitRecord.h:34,
from bait-filter.cpp:30:
range_functions.h:624:26: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos2,' ');
^
In file included from global-types-and-parameters.h:35:0,
from bait-filter.cpp:29:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
In file included from CBlastParser.h:47:0,
from CBaitRecord.h:34,
from bait-filter.cpp:30:
range_functions.h:634:28: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos2,' ');
^
In file included from global-types-and-parameters.h:35:0,
from bait-filter.cpp:29:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
In file included from CBlastParser.h:47:0,
from CBaitRecord.h:34,
from bait-filter.cpp:30:
range_functions.h:656:26: error: cannot bind non-const lvalue reference of type 'faststring::size_t& {aka long unsigned int&}' to an rvalue of type 'faststring::size_t {aka long unsigned int}'
str.skip_symbol(pos1,' ');
^
In file included from global-types-and-parameters.h:35:0,
from bait-filter.cpp:29:
faststring2.h:1408:9: note: initializing argument 1 of 'void faststring::skip_symbol(faststring::size_t&, char) const'
void skip_symbol(size_t &pos, char c) const
^~~~~~~~~~~
makefile:8: recipe for target 'bait-filter.o' failed
make[1]: *** [bait-filter.o] Error 1
make[1]: Leaving directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
make[1]: Entering directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
g++ -I . -O3 -c Csequence_cluster_and_center_sequence.cpp -o Csequence_cluster_and_center_sequence.o
In file included from /usr/include/c++/7/set:60:0,
from Csequence_cluster_and_center_sequence.h:31,
from Csequence_cluster_and_center_sequence.cpp:27:
/usr/include/c++/7/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long unsigned int&&>, std::tuple<>}; _Key = long unsigned int; _Val = std::pair<const long unsigned int, double>; _KeyOfValue = std::_Select1st<std::pair<const long unsigned int, double> >; _Compare = std::less<long unsigned int>; _Alloc = std::allocator<std::pair<const long unsigned int, double> >]':
/usr/include/c++/7/bits/stl_tree.h:2395:7: note: parameter passing for argument of type 'std::_Rb_tree<long unsigned int, std::pair<const long unsigned int, double>, std::_Select1st<std::pair<const long unsigned int, double> >, std::less<long unsigned int>, std::allocator<std::pair<const long unsigned int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const long unsigned int, double> >}' changed in GCC 7.1
_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/vector:69:0,
from faststring2.h:37,
from Csequence_cluster_and_center_sequence.h:36,
from Csequence_cluster_and_center_sequence.cpp:27:
/usr/include/c++/7/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {cluster_node}; _Tp = cluster_node; _Alloc = std::allocator<cluster_node>]':
/usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<cluster_node>::iterator {aka __gnu_cxx::__normal_iterator<cluster_node*, std::vector<cluster_node> >}' changed in GCC 7.1
vector<_Tp, _Alloc>::
^~~~~~~~~~~~~~~~~~~
/usr/include/c++/7/bits/vector.tcc: In member function 'void CDistance_Cluster::run_clustering(double)':
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cluster_node*, std::vector<cluster_node> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from statistic_functions.h:32,
from Csequence_cluster_and_center_sequence.h:39,
from Csequence_cluster_and_center_sequence.cpp:27:
/usr/include/c++/7/bits/stl_map.h:512:4: note: parameter passing for argument of type 'std::_Rb_tree<long unsigned int, std::pair<const long unsigned int, double>, std::_Select1st<std::pair<const long unsigned int, double> >, std::less<long unsigned int>, std::allocator<std::pair<const long unsigned int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const long unsigned int, double> >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
In file included from /usr/include/c++/7/vector:69:0,
from faststring2.h:37,
from Csequence_cluster_and_center_sequence.h:36,
from Csequence_cluster_and_center_sequence.cpp:27:
/usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cluster_node*, std::vector<cluster_node> >' changed in GCC 7.1
_M_realloc_insert(end(), std::forward<_Args>(__args)...);
~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/7/map:61:0,
from statistic_functions.h:32,
from Csequence_cluster_and_center_sequence.h:39,
from Csequence_cluster_and_center_sequence.cpp:27:
/usr/include/c++/7/bits/stl_map.h:512:4: note: parameter passing for argument of type 'std::_Rb_tree<long unsigned int, std::pair<const long unsigned int, double>, std::_Select1st<std::pair<const long unsigned int, double> >, std::less<long unsigned int>, std::allocator<std::pair<const long unsigned int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const long unsigned int, double> >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:512:4: note: parameter passing for argument of type 'std::_Rb_tree<long unsigned int, std::pair<const long unsigned int, double>, std::_Select1st<std::pair<const long unsigned int, double> >, std::less<long unsigned int>, std::allocator<std::pair<const long unsigned int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const long unsigned int, double> >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:512:4: note: parameter passing for argument of type 'std::_Rb_tree<long unsigned int, std::pair<const long unsigned int, double>, std::_Select1st<std::pair<const long unsigned int, double> >, std::less<long unsigned int>, std::allocator<std::pair<const long unsigned int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const long unsigned int, double> >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:512:4: note: parameter passing for argument of type 'std::_Rb_tree<long unsigned int, std::pair<const long unsigned int, double>, std::_Select1st<std::pair<const long unsigned int, double> >, std::less<long unsigned int>, std::allocator<std::pair<const long unsigned int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const long unsigned int, double> >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
/usr/include/c++/7/bits/stl_map.h:512:4: note: parameter passing for argument of type 'std::_Rb_tree<long unsigned int, std::pair<const long unsigned int, double>, std::_Select1st<std::pair<const long unsigned int, double> >, std::less<long unsigned int>, std::allocator<std::pair<const long unsigned int, double> > >::const_iterator {aka std::_Rb_tree_const_iterator<std::pair<const long unsigned int, double> >}' changed in GCC 7.1
__i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
^~~
make[1]: Leaving directory '/<<BUILDDIR>>/baitfisher-1.0+dfsg'
dh_auto_build: make -j4 -O returned exit code 2
debian/rules:11: recipe for target 'build-arch' failed
make: *** [build-arch] Error 25
dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2018-03-18T17:18:19Z
Finished
--------
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 2140
Build-Time: 12
Distribution: buster-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 89
Job: baitfisher_1.0+dfsg-2
Machine Architecture: armhf
Package: baitfisher
Package-Time: 117
Source-Version: 1.0+dfsg-2
Space: 2140
Status: attempted
Version: 1.0+dfsg-2
--------------------------------------------------------------------------------
Finished at 2018-03-18T17:18:19Z
Build needed 00:01:57, 2140k disk space